Peter Sims, Ph.D. - Publications

Affiliations: 
Columbia University, New York, NY 

17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Bayik D, Silver D, Park C, Watson D, Sorensen M, Roversi G, Lauko A, Alban T, Lo A, Sims P, Barnholtz-Sloan J, Kristensen B, Hyun Hwang T, Khalil A, Iavarone A, et al. IMMU-01. MYELOID-DERIVED SUPPRESSOR CELL HETEROGENEITY DRIVES GLIOBLASTOMA PROGRESSION IN A SEX-DEPENDENT MANNER Neuro-Oncology. 21: vi118-vi118. DOI: 10.1093/Neuonc/Noz175.495  0.302
2019 Zhao W, Spinazzi E, Dovas A, Upadhyayula P, Marie T, Sisti M, Bruce J, Canoll PD, Sims P. COMP-12. SINGLE-CELL TRANSCRIPTOME PROFILING OF GBM TISSUE ACUTE SLICE CULTURES FOR PERSONALIZED DRUG SCREENING Neuro-Oncology. 21: vi63-vi63. DOI: 10.1093/Neuonc/Noz175.255  0.303
2019 Save A, Hollon T, Farooq Z, Boyett D, Hawkins-Daarud A, Yoon H, Singleton K, Clark-Swanson K, Li J, Swanson K, Freudiger C, Orringer D, Lassman A, Sims P, Grinband J, et al. TMOD-14. RADIOGRAPHIC, STIMULATED RAMAN HISTOLOGIC, AND MULTIPLEXED RNA-SEQUENCING ANALYSIS OF POST-TREATMENT RECURRENT HIGH-GRADE GLIOMAS Neuro-Oncology. 21: vi265-vi265. DOI: 10.1093/Neuonc/Noz175.1113  0.617
2018 Ding H, Douglass EF, Sonabend AM, Mela A, Bose S, Gonzalez C, Canoll PD, Sims PA, Alvarez MJ, Califano A. Quantitative assessment of protein activity in orphan tissues and single cells using the metaVIPER algorithm. Nature Communications. 9: 1471. PMID 29662057 DOI: 10.1038/S41467-018-03843-3  0.479
2015 Bose S, Wan Z, Carr A, Rizvi AH, Vieira G, Pe'er D, Sims PA. Scalable microfluidics for single cell RNA printing and sequencing. Genome Biology. 16: 120. PMID 26047807 DOI: 10.1186/S13059-015-0684-3  0.535
2014 Sims J, Grinshpun B, Feng Y, Neira J, Samanamud J, Amendolara B, Canoll P, Sims P, Shen Y, Bruce J. IT-32 * DIVERGENCE OF INTRATUMORAL AND SYSTEMIC T CELL REPERTOIRES REFLECTS LOCAL MONOCYTE PROFILES DURING GLIOMA PROGRESSION Neuro-Oncology. 16: v116-v117. DOI: 10.1093/Neuonc/Nou258.30  0.333
2014 Gill B, Pisapia D, Malone H, Goldstein H, Lei L, Sonabend A, Yun J, Samanamud J, Banu M, Dovas A, Sims J, Teich A, Sheth S, McKhann G, Sisti M, ... ... Sims P, et al. GE-12 * RADIOGRAPHICALLY-LOCALIZED BIOPSIES REVEAL SUBTYPE-SPECIFIC PATTERNS IN MOLECULAR AND CELLULAR COMPOSITION AT THE INFILTRATIVE MARGINS OF GLIOBLASTOMA Neuro-Oncology. 16: v98-v99. DOI: 10.1093/Neuonc/Nou256.12  0.345
2014 Canoll P, Sims P, Gil B, Pisapia D, Malone H, Goldstein H, Lei L, Sonabend A, Yun J, Samanamud J, Sims J, Teich A, Sheth S, McKhann G, Sisti M, et al. IMAGE GUIDED RNA-SEQ REVEALS SUBTYPE-SPECIFIC PATTERNS AT THE INFILTRATIVE MARGINS OF GLIOBLASTOMA Neuro-Oncology. 16: iii10-iii10. DOI: 10.1093/Neuonc/Nou206.34  0.342
2012 Shiroguchi K, Jia TZ, Sims PA, Xie XS. Digital RNA sequencing minimizes sequence-dependent bias and amplification noise with optimized single-molecule barcodes. Proceedings of the National Academy of Sciences of the United States of America. 109: 1347-52. PMID 22232676 DOI: 10.1073/pnas.1118018109  0.643
2011 Sims PA, Greenleaf WJ, Duan H, Xie XS. Fluorogenic DNA sequencing in PDMS microreactors. Nature Methods. 8: 575-80. PMID 21666670 DOI: 10.1038/Nmeth.1629  0.517
2011 Greenleaf WJ, Sims PA, Duan H, Xie XS. Fluorogenic Pyrosequencing in Microreactors Biophysical Journal. 100: 368a. DOI: 10.1016/J.Bpj.2010.12.2198  0.429
2009 Sims PA, Xie XS. Probing dynein and kinesin stepping with mechanical manipulation in a living cell. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 10: 1511-6. PMID 19504528 DOI: 10.1002/Cphc.200900113  0.385
2008 Nan X, Sims PA, Xie XS. Organelle tracking in a living cell with microsecond time resolution and nanometer spatial precision. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 9: 707-12. PMID 18383236 DOI: 10.1002/Cphc.200700839  0.569
2008 Nan X, Sims PA, Xie XS. Cover Picture: Organelle Tracking in a Living Cell with Microsecond Time Resolution and Nanometer Spatial Precision (ChemPhysChem 5/2008) Chemphyschem. 9: 653-653. DOI: 10.1002/Cphc.200890017  0.552
2005 Nan X, Sims PA, Chen P, Xie XS. Observation of individual microtubule motor steps in living cells with endocytosed quantum dots. The Journal of Physical Chemistry. B. 109: 24220-4. PMID 16375416 DOI: 10.1021/Jp056360W  0.567
2004 Sims PA, Wong CF, McCammon JA. Charge optimization of the interface between protein kinases and their ligands. Journal of Computational Chemistry. 25: 1416-29. PMID 15185335 DOI: 10.1002/Jcc.20067  0.304
2003 Sims PA, Wong CF, McCammon JA. A computational model of binding thermodynamics: the design of cyclin-dependent kinase 2 inhibitors. Journal of Medicinal Chemistry. 46: 3314-25. PMID 12852762 DOI: 10.1021/jm0205043  0.313
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