Markus Willard Covert
Affiliations: | 2003 | University of California, San Diego, La Jolla, CA |
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"Markus Covert"Parents
Sign in to add mentorBernhard O. Palsson | grad student | 2003 | UCSD | |
(Transcriptional regulation in Escherichia coli: A systems biology approach.) |
Children
Sign in to add traineeMarta Andres-Terre | grad student | (ID Tree) | |
Elsa Birch | grad student | Stanford | |
Jacob Hughey | grad student | Stanford | |
Jonathan Karr | grad student | Stanford | |
Jayodita Sanghvi | grad student | Stanford | |
Keara Lane | post-doc | Northwestern | |
David Van Valen | post-doc | UCSD (Physics Tree) | |
Sergi Regot | post-doc | 2011-2015 | Johns Hopkins Medical School |
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Publications
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Skalnik CJ, Cheah SY, Yang MY, et al. (2023) Whole-cell modeling of E. coli colonies enables quantification of single-cell heterogeneity in antibiotic responses. Plos Computational Biology. 19: e1011232 |
Ahn-Horst TA, Mille LS, Sun G, et al. (2022) An expanded whole-cell model of E. coli links cellular physiology with mechanisms of growth rate control. Npj Systems Biology and Applications. 8: 30 |
Kudo T, Lane K, Covert MW. (2022) A multiplexed epitope barcoding strategy that enables dynamic cellular phenotypic screens. Cell Systems |
Maritan M, Autin L, Karr J, et al. (2021) Building Structural Models of a Whole Mycoplasma Cell. Journal of Molecular Biology. 434: 167351 |
Macklin DN, Ahn-Horst TA, Choi H, et al. (2020) Simultaneous cross-evaluation of heterogeneous datasets via mechanistic simulation. Science (New York, N.Y.). 369 |
Yang HW, Cappell SD, Jaimovich A, et al. (2020) Stress-mediated exit to quiescence restricted by increasing persistence in CDK4/6 activation. Elife. 9 |
Bodner K, Melkonian AL, Barth AIM, et al. (2020) Engineered Fluorescent E. coli Lysogens Allow Live-Cell Imaging of Functional Prophage Induction Triggered inside Macrophages. Cell Systems |
Moen E, Bannon D, Kudo T, et al. (2019) Deep learning for cellular image analysis. Nature Methods |
DeFelice MM, Clark HR, Hughey JJ, et al. (2019) NF-κB signaling dynamics is controlled by a dose-sensing autoregulatory loop. Science Signaling. 12 |
Jeknić S, Kudo T, Covert MW. (2019) Techniques for Studying Decoding of Single Cell Dynamics. Frontiers in Immunology. 10: 755 |