Markus Willard Covert

2003 University of California, San Diego, La Jolla, CA 
"Markus Covert"


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Bernhard O. Palsson grad student 2003 UCSD
 (Transcriptional regulation in Escherichia coli: A systems biology approach.)


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Marta Andres-Terre grad student (ID Tree)
Elsa Birch grad student Stanford
Jacob Hughey grad student Stanford
Jonathan Karr grad student Stanford
Jayodita Sanghvi grad student Stanford
Keara Lane post-doc Northwestern
David Van Valen post-doc UCSD (Physics Tree)
Sergi Regot post-doc 2011-2015 Johns Hopkins Medical School
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Maritan M, Autin L, Karr J, et al. (2021) Building Structural Models of a Whole Mycoplasma Cell. Journal of Molecular Biology. 434: 167351
Sun G, Ahn-Horst TA, Covert MW. (2021) The E. coli Whole-Cell Modeling Project. Ecosal Plus. eESP00012020
Macklin DN, Ahn-Horst TA, Choi H, et al. (2020) Simultaneous cross-evaluation of heterogeneous datasets via mechanistic simulation. Science (New York, N.Y.). 369
Yang HW, Cappell SD, Jaimovich A, et al. (2020) Stress-mediated exit to quiescence restricted by increasing persistence in CDK4/6 activation. Elife. 9
Moen E, Bannon D, Kudo T, et al. (2019) Deep learning for cellular image analysis. Nature Methods
DeFelice MM, Clark HR, Hughey JJ, et al. (2019) NF-κB signaling dynamics is controlled by a dose-sensing autoregulatory loop. Science Signaling. 12
Jeknić S, Kudo T, Covert MW. (2019) Techniques for Studying Decoding of Single Cell Dynamics. Frontiers in Immunology. 10: 755
Lane K, Andres-Terre M, Kudo T, et al. (2019) Escalating Threat Levels of Bacterial Infection Can Be Discriminated by Distinct MAPK and NF-κB Signaling Dynamics in Single Host Cells. Cell Systems
Yang HW, Cappell SD, Jaimovich A, et al. (2019) Author response: Stress-mediated exit to quiescence restricted by increasing persistence in CDK4/6 activation Elife
Gutschow MV, Mason JC, Lane KM, et al. (2018) Combinatorial processing of bacterial and host-derived innate immune stimuli at the single-cell level. Molecular Biology of the Cell. mbcE18070423
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