William Stafford Noble
Affiliations: | 1999-2002 | Computer Science | Columbia University, New York, NY |
| 2002- | Genome Sciences | University of Washington, Seattle, Seattle, WA |
Area:
modeling biological processes at the molecular levelWebsite:
http://www.gs.washington.edu/faculty/noble.htmGoogle:
"William Noble"Bio:
http://noble.gs.washington.edu/
Cross-listing: Neurotree
Parents
Sign in to add mentor| Charles Elkan | grad student | 1998 | UCSD | |
| (A Bayesian approach to motif-based protein modeling) | ||||
| David Henry Haussler | post-doc | 1999 | UC Santa Cruz | |
Children
Sign in to add trainee| Darrin P. Lewis | grad student | Columbia (Neurotree) | |
| Lindsay Pino | grad student | University of Washington (Chemistry Tree) | |
| Aaron A. Klammer | grad student | 2008 | University of Washington (Neurotree) |
| Xiaoyu Chen | grad student | 2011 | University of Washington (Neurotree) |
| Benjamin J. Diament | grad student | 2011 | University of Washington (Neurotree) |
| Oliver Serang | grad student | 2011 | University of Washington (Neurotree) |
| Ritambhara Singh | post-doc | University of Washington (MathTree) | |
| William E Fondrie | post-doc | 2018- | University of Washington (Chemistry Tree) |
| Michael M. Hoffman | post-doc | 2008-2013 | University of Washington |
BETA: Related publications
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Publications
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| Perez-Riverol Y, Bittremieux W, Noble WS, et al. (2025) Open-Source and FAIR Research Software for Proteomics. Journal of Proteome Research. 24: 2222-2234 |
| Bittremieux W, Ananth V, Fondrie WE, et al. (2024) Deep Learning Methods for De Novo Peptide Sequencing. Mass Spectrometry Reviews |
| Solivais AJ, Boekweg H, Smith LM, et al. (2024) Improved detection of differentially abundant proteins through FDR-control of peptide-identity-propagation. Biorxiv : the Preprint Server For Biology |
| Dekker J, Oksuz BA, Zhang Y, et al. (2024) An integrated view of the structure and function of the human 4D nucleome. Biorxiv : the Preprint Server For Biology |
| Libbrecht MW, Hoffman MM, Bilmes JA, et al. (2024) Entropic Graph-based Posterior Regularization. Proceedings of the ... International Conference On Machine Learning. International Conference On Machine Learning. 37: 1992-2001 |
| Wen B, Hsu C, Zeng WF, et al. (2024) Carafe enables high quality spectral library generation for data-independent acquisition proteomics. Biorxiv : the Preprint Server For Biology |
| Melendez C, Sanders J, Yilmaz M, et al. (2024) Accounting for Digestion Enzyme Bias in Casanovo. Journal of Proteome Research |
| Yilmaz M, Fondrie WE, Bittremieux W, et al. (2024) Sequence-to-sequence translation from mass spectra to peptides with a transformer model. Nature Communications. 15: 6427 |
| Ananth V, Sanders J, Yilmaz M, et al. (2024) A learned score function improves the power of mass spectrometry database search. Bioinformatics (Oxford, England). 40: i410-i417 |
| Freestone J, Noble WS, Keich U. (2024) Reinvestigating the Correctness of Decoy-Based False Discovery Rate Control in Proteomics Tandem Mass Spectrometry. Journal of Proteome Research |