Jason A. Papin, Ph.D.

Affiliations: 
Biomedical Engineering University of Virginia, Charlottesville, VA 
Area:
Computational Systems Biology
Google:
"Jason Papin"

Parents

Sign in to add mentor
Bernhard O. Palsson grad student 2004 UCSD
 (Systems analysis of cellular signaling networks.)

Children

Sign in to add trainee
Edik M. Blais grad student 2010- UVA
Gregory Leonard Medlock grad student 2014- UVA
Erwin P. Gianchandani grad student 2008 UVA
Matthew A. Oberhardt grad student 2010 UVA
Arvind K. Chavali grad student 2011 UVA
Paul A. Jensen grad student 2008-2013 UVA
Maureen A. Carey grad student 2015-2018 (Microtree)
Jong Min Lee post-doc 2005-2006 UVA (MathTree)
Ani W. Manichaikul post-doc 2008-2009 UVA
BETA: Related publications

Publications

You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect.

Jenior ML, Papin JA. (2020) Clostridioides difficile: Sometimes It Pays To Be Difficult. Cell Host & Microbe. 28: 358-359
Carey MA, Dräger A, Beber ME, et al. (2020) Community standards to facilitate development and address challenges in metabolic modeling. Molecular Systems Biology. 16: e9235
Liu Y, Moore JH, Kolling GL, et al. (2020) Minimum Bactericidal Concentration of Ciprofloxacin to Determined Rapidly Based on Pyocyanin Secretion. Sensors and Actuators. B, Chemical. 312
Medlock GL, Moutinho TJ, Papin JA. (2020) Medusa: Software to build and analyze ensembles of genome-scale metabolic network reconstructions. Plos Computational Biology. 16: e1007847
Jenior ML, Moutinho TJ, Dougherty BV, et al. (2020) Transcriptome-guided parsimonious flux analysis improves predictions with metabolic networks in complex environments. Plos Computational Biology. 16: e1007099
Lieven C, Beber ME, Olivier BG, et al. (2020) Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology. 38: 504
Lieven C, Beber ME, Olivier BG, et al. (2020) MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology
Medlock GL, Papin JA. (2020) Guiding the Refinement of Biochemical Knowledgebases with Ensembles of Metabolic Networks and Machine Learning. Cell Systems. 10: 109-119.e3
Pannala VR, Vinnakota KC, Estes SK, et al. (2019) Genome-scale model-based identification of metabolite indicators for early detection of kidney toxicity. Toxicological Sciences : An Official Journal of the Society of Toxicology
Rawls KD, Blais EM, Dougherty BV, et al. (2019) Genome-Scale Characterization of Toxicity-Induced Metabolic Alterations in Primary Hepatocytes. Toxicological Sciences : An Official Journal of the Society of Toxicology
See more...