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Brenna M. Henn, Ph.D. - Publications

Affiliations: 
2009 Stanford University, Palo Alto, CA 
Area:
Paleoanthropology; Africa, Europe
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67 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 DeGorter MK, Goddard PC, Karakoc E, Kundu S, Yan SM, Nachun D, Abell N, Aguirre M, Carstensen T, Chen Z, Durrant M, Dwaracherla VR, Feng K, Gloudemans MJ, Hunter N, ... ... Henn B, et al. Transcriptomics and chromatin accessibility in multiple African population samples. Biorxiv : the Preprint Server For Biology. PMID 37986808 DOI: 10.1101/2023.11.04.564839  0.402
2023 Ragsdale AP, Weaver TD, Atkinson EG, Hoal EG, Möller M, Henn BM, Gravel S. Publisher Correction: A weakly structured stem for human origins in Africa. Nature. PMID 37460744 DOI: 10.1038/s41586-023-06433-6  0.585
2023 Reynolds AW, Grote MN, Myrick JW, Al-Hindi DR, Siford RL, Mastoras M, Möller M, Henn BM. Persistence of Matrilocal Postmarital Residence Across Multiple Generations in Southern Africa. Human Nature (Hawthorne, N.Y.). 34: 295-323. PMID 37310564 DOI: 10.1007/s12110-023-09452-4  0.33
2023 Mester R, Hou K, Ding Y, Meeks G, Burch KS, Bhattacharya A, Henn BM, Pasaniuc B. Impact of cross-ancestry genetic architecture on GWASs in admixed populations. American Journal of Human Genetics. PMID 37224807 DOI: 10.1016/j.ajhg.2023.05.001  0.435
2023 Ragsdale AP, Weaver TD, Atkinson EG, Hoal EG, Möller M, Henn BM, Gravel S. A weakly structured stem for human origins in Africa. Nature. PMID 37198480 DOI: 10.1038/s41586-023-06055-y  0.731
2023 Pless E, Eckburg AM, Henn BM. Predicting environmental and ecological drivers of human population structure. Molecular Biology and Evolution. 40. PMID 37146165 DOI: 10.1093/molbev/msad094  0.427
2023 Mester R, Hou K, Ding Y, Meeks G, Burch KS, Bhattacharya A, Henn BM, Pasaniuc B. Impact of cross-ancestry genetic architecture on GWAS in admixed populations. Biorxiv : the Preprint Server For Biology. PMID 36747759 DOI: 10.1101/2023.01.20.524946  0.433
2022 Swinford N, Gallagher B, Sheehama J, Lin M, Prall S, Scelza B, Henn BM. Examination of runs of homozygosity in relation to height in an endogamous Namibian population. American Journal of Biological Anthropology. 180: 207-215. PMID 36790690 DOI: 10.1002/ajpa.24660  0.438
2022 van Eeden G, Uren C, Pless E, Mastoras M, van der Spuy GD, Tromp G, Henn BM, Möller M. The recombination landscape of the Khoe-San likely represents the upper limits of recombination divergence in humans. Genome Biology. 23: 172. PMID 35945619 DOI: 10.1186/s13059-022-02744-5  0.383
2022 Gopalan S, Berl REW, Myrick JW, Garfield ZH, Reynolds AW, Bafens BK, Belbin G, Mastoras M, Williams C, Daya M, Negash AN, Feldman MW, Hewlett BS, Henn BM. Hunter-gatherer genomes reveal diverse demographic trajectories during the rise of farming in Eastern Africa. Current Biology : Cb. 32: 1852-1860.e5. PMID 35271793 DOI: 10.1016/j.cub.2022.02.050  0.474
2021 Lin M, Park DS, Zaitlen NA, Henn BM, Gignoux CR. Admixed Populations Improve Power for Variant Discovery and Portability in Genome-Wide Association Studies. Frontiers in Genetics. 12: 673167. PMID 34108994 DOI: 10.3389/fgene.2021.673167  0.449
2021 Gopalan S, Atkinson EG, Buck LT, Weaver TD, Henn BM. Inferring archaic introgression from hominin genetic data. Evolutionary Anthropology. PMID 33951239 DOI: 10.1002/evan.21895  0.687
2021 Eeden G, Uren C, Möller M, Henn BM. Inferring Recombination Patterns In African Populations. Human Molecular Genetics. PMID 33445180 DOI: 10.1093/hmg/ddab020  0.399
2020 Scelza BA, Atkinson EG, Prall S, McElreath R, Sheehama J, Henn BM. The ethics and logistics of field-based genetic paternity studies. Evolutionary Human Sciences. 2. PMID 34423234 DOI: 10.1017/ehs.2020.23  0.31
2020 Scelza BA, Prall SP, Swinford N, Gopalan S, Atkinson EG, McElreath R, Sheehama J, Henn BM. High rate of extrapair paternity in a human population demonstrates diversity in human reproductive strategies. Science Advances. 6: eaay6195. PMID 32128411 DOI: 10.1126/Sciadv.Aay6195  0.462
2019 Wojcik GL, Graff M, Nishimura KK, Tao R, Haessler J, Gignoux CR, Highland HM, Patel YM, Sorokin EP, Avery CL, Belbin GM, Bien SA, Cheng I, Cullina S, Hodonsky CJ, ... ... Henn BM, et al. Genetic analyses of diverse populations improves discovery for complex traits. Nature. PMID 31217584 DOI: 10.1038/S41586-019-1310-4  0.565
2019 Nemat-Gorgani N, Guethlein LA, Henn BM, Norberg SJ, Chiaroni J, Sikora M, Quintana-Murci L, Mountain JL, Norman PJ, Parham P. Diversity of Killer Cell Ig-Like Receptor, HLA Class I, and Their Interactions in Seven Populations of Sub-Saharan Africans. Journal of Immunology (Baltimore, Md. : 1950). PMID 30918042 DOI: 10.4049/Jimmunol.1801586  0.494
2018 Schurz H, Kinnear CJ, Gignoux C, Wojcik G, van Helden PD, Tromp G, Henn B, Hoal EG, Möller M. A Sex-Stratified Genome-Wide Association Study of Tuberculosis Using a Multi-Ethnic Genotyping Array. Frontiers in Genetics. 9: 678. PMID 30713548 DOI: 10.3389/Fgene.2018.00678  0.357
2018 Lin M, Siford RL, Martin AR, Nakagome S, Möller M, Hoal EG, Bustamante CD, Gignoux CR, Henn BM. Rapid evolution of a skin-lightening allele in southern African KhoeSan. Proceedings of the National Academy of Sciences of the United States of America. 115: 13324-13329. PMID 30530665 DOI: 10.1073/Pnas.1801948115  0.46
2018 Henn BM, Steele TE, Weaver TD. Clarifying distinct models of modern human origins in Africa. Current Opinion in Genetics & Development. 53: 148-156. PMID 30423527 DOI: 10.1016/J.Gde.2018.10.003  0.703
2018 Atkinson EG, Audesse AJ, Palacios JA, Bobo DM, Webb AE, Ramachandran S, Henn BM. No Evidence for Recent Selection at FOXP2 among Diverse Human Populations. Cell. PMID 30078708 DOI: 10.1016/J.Cell.2018.06.048  0.431
2018 Scerri EML, Thomas MG, Manica A, Gunz P, Stock JT, Stringer C, Grove M, Groucutt HS, Timmermann A, Rightmire GP, d'Errico F, Tryon CA, Drake NA, Brooks AS, Dennell RW, ... ... Henn BM, et al. Did Our Species Evolve in Subdivided Populations across Africa, and Why Does It Matter? Trends in Ecology & Evolution. PMID 30007846 DOI: 10.1016/J.Tree.2018.05.005  0.52
2018 Jobin M, Schurz H, Henn BM. Imputor: Phylogenetically aware software for imputation of errors in next-generation sequencing. Genome Biology and Evolution. PMID 29722813 DOI: 10.1093/Gbe/Evy088  0.334
2018 Nemat-Gorgani N, Hilton HG, Henn BM, Lin M, Gignoux CR, Myrick JW, Werely CJ, Granka JM, Möller M, Hoal EG, Yawata M, Yawata N, Boelen L, Asquith B, Parham P, et al. Different Selected Mechanisms Attenuated the Inhibitory Interaction of KIR2DL1 with C2HLA-C in Two Indigenous Human Populations in Southern Africa. Journal of Immunology (Baltimore, Md. : 1950). PMID 29549179 DOI: 10.4049/Jimmunol.1701780  0.473
2018 Sugden LA, Atkinson EG, Fischer AP, Rong S, Henn BM, Ramachandran S. Localization of adaptive variants in human genomes using averaged one-dependence estimation. Nature Communications. 9: 703. PMID 29459739 DOI: 10.1038/S41467-018-03100-7  0.383
2017 Martin AR, Lin M, Granka JM, Myrick JW, Liu X, Sockell A, Atkinson EG, Werely CJ, Möller M, Sandhu MS, Kingsley DM, Hoal EG, Liu X, Daly MJ, Feldman MW, ... ... Henn BM, et al. An Unexpectedly Complex Architecture for Skin Pigmentation in Africans. Cell. 171: 1340-1353.e14. PMID 29195075 DOI: 10.1016/J.Cell.2017.11.015  0.375
2017 Carja O, MacIsaac JL, Mah SM, Henn BM, Kobor MS, Feldman MW, Fraser HB. Worldwide patterns of human epigenetic variation. Nature Ecology & Evolution. 1: 1577-1583. PMID 29185505 DOI: 10.1038/S41559-017-0299-Z  0.472
2017 Gopalan S, Carja O, Fagny M, Patin E, Myrick JW, McEwen LM, Mah SM, Kobor MS, Froment A, Feldman MW, Quintana-Murci L, Henn BM. Trends in DNA Methylation with Age Replicate Across Diverse Human Populations. Genetics. PMID 28533441 DOI: 10.1534/Genetics.116.195594  0.432
2017 Uren C, Henn BM, Franke A, Wittig M, van Helden PD, Hoal EG, Möller M. A post-GWAS analysis of predicted regulatory variants and tuberculosis susceptibility. Plos One. 12: e0174738. PMID 28384278 DOI: 10.1371/Journal.Pone.0174738  0.319
2017 McManus KF, Taravella AM, Henn BM, Bustamante CD, Sikora M, Cornejo OE. Population genetic analysis of the DARC locus (Duffy) reveals adaptation from standing variation associated with malaria resistance in humans. Plos Genetics. 13: e1006560. PMID 28282382 DOI: 10.1371/Journal.Pgen.1006560  0.499
2017 Uren C, Möller M, van Helden PD, Henn BM, Hoal EG. Population structure and infectious disease risk in southern Africa. Molecular Genetics and Genomics : Mgg. PMID 28229227 DOI: 10.1007/S00438-017-1296-2  0.515
2016 Mallick S, Li H, Lipson M, Mathieson I, Gymrek M, Racimo F, Zhao M, Chennagiri N, Nordenfelt S, Tandon A, Skoglund P, Lazaridis I, Sankararaman S, Fu Q, Rohland N, ... ... Henn BM, et al. The Simons Genome Diversity Project: 300 genomes from 142 diverse populations. Nature. PMID 27654912 DOI: 10.1038/Nature18964  0.514
2016 Uren C, Kim M, Martin AR, Bobo D, Gignoux CR, van Helden PD, Möller M, Hoal EG, Henn BM. Fine-Scale Human Population Structure in Southern Africa Reflects Ecogeographic Boundaries. Genetics. PMID 27474727 DOI: 10.1534/Genetics.116.187369  0.588
2016 Monzón JD, Atkinson EG, Henn BM, Benach JL. Population and Evolutionary Genomics of Amblyomma americanum, an Expanding Arthropod Disease Vector. Genome Biology and Evolution. 8: 1351-60. PMID 27190204 DOI: 10.1093/Gbe/Evw080  0.586
2016 Wallace IJ, Botigué LR, Lin M, Smaers JB, Henn BM, Grine FE. Worldwide variation in hip fracture incidence weakly aligns with genetic divergence between populations. Osteoporosis International : a Journal Established as Result of Cooperation Between the European Foundation For Osteoporosis and the National Osteoporosis Foundation of the Usa. PMID 27091742 DOI: 10.1007/S00198-016-3591-X  0.357
2015 Henn BM, Botigué LR, Peischl S, Dupanloup I, Lipatov M, Maples BK, Martin AR, Musharoff S, Cann H, Snyder MP, Excoffier L, Kidd JM, Bustamante CD. Distance from sub-Saharan Africa predicts mutational load in diverse human genomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 26712023 DOI: 10.1073/Pnas.1510805112  0.485
2015 Hilton HG, Norman PJ, Nemat-Gorgani N, Goyos A, Hollenbach JA, Henn BM, Gignoux CR, Guethlein LA, Parham P. Loss and Gain of Natural Killer Cell Receptor Function in an African Hunter-Gatherer Population. Plos Genetics. 11: e1005439. PMID 26292085 DOI: 10.1371/Journal.Pgen.1005439  0.339
2015 Sudmant PH, Mallick S, Nelson BJ, Hormozdiari F, Krumm N, Huddleston J, Coe BP, Baker C, Nordenfelt S, Bamshad M, Jorde LB, Posukh OL, Sahakyan H, Watkins WS, Yepiskoposyan L, ... ... Henn B, et al. Global diversity, population stratification, and selection of human copy number variation. Science (New York, N.Y.). PMID 26249230 DOI: 10.1126/Science.Aab3761  0.599
2015 Henn BM, Botigué LR, Bustamante CD, Clark AG, Gravel S. Estimating the mutation load in human genomes. Nature Reviews. Genetics. 16: 333-43. PMID 25963372 DOI: 10.1038/Nrg3931  0.446
2015 Hilton H, Norman P, Nemat-Gorgani N, Goyos A, Gignoux C, Mountain J, Henn B, Guethlein L, Parham P. LBP10 Human Immunology. 76: 219. DOI: 10.1016/J.Humimm.2015.01.042  0.476
2014 Lazaridis I, Patterson N, Mittnik A, Renaud G, Mallick S, Kirsanow K, Sudmant PH, Schraiber JG, Castellano S, Lipson M, Berger B, Economou C, Bollongino R, Fu Q, Bos KI, ... ... Henn BM, et al. Ancient human genomes suggest three ancestral populations for present-day Europeans. Nature. 513: 409-13. PMID 25230663 DOI: 10.1038/Nature13673  0.55
2014 Martin AR, Costa HA, Lappalainen T, Henn BM, Kidd JM, Yee MC, Grubert F, Cann HM, Snyder M, Montgomery SB, Bustamante CD. Transcriptome sequencing from diverse human populations reveals differentiated regulatory architecture. Plos Genetics. 10: e1004549. PMID 25121757 DOI: 10.1371/Journal.Pgen.1004549  0.549
2014 Sikora M, Carpenter ML, Moreno-Estrada A, Henn BM, Underhill PA, Sánchez-Quinto F, Zara I, Pitzalis M, Sidore C, Busonero F, Maschio A, Angius A, Jones C, Mendoza-Revilla J, Nekhrizov G, et al. Population genomic analysis of ancient and modern genomes yields new insights into the genetic ancestry of the Tyrolean Iceman and the genetic structure of Europe. Plos Genetics. 10: e1004353. PMID 24809476 DOI: 10.1371/Journal.Pgen.1004353  0.517
2014 Kidd JM, Sharpton TJ, Bobo D, Norman PJ, Martin AR, Carpenter ML, Sikora M, Gignoux CR, Nemat-Gorgani N, Adams A, Guadalupe M, Guo X, Feng Q, Li Y, Liu X, ... ... Henn BM, et al. Exome capture from saliva produces high quality genomic and metagenomic data. Bmc Genomics. 15: 262. PMID 24708091 DOI: 10.1186/1471-2164-15-262  0.481
2013 Daya M, van der Merwe L, Galal U, Möller M, Salie M, Chimusa ER, Galanter JM, van Helden PD, Henn BM, Gignoux CR, Hoal E. A panel of ancestry informative markers for the complex five-way admixed South African coloured population. Plos One. 8: e82224. PMID 24376522 DOI: 10.1371/Journal.Pone.0082224  0.533
2013 Chimusa ER, Daya M, Möller M, Ramesar R, Henn BM, van Helden PD, Mulder NJ, Hoal EG. Determining ancestry proportions in complex admixture scenarios in South Africa using a novel proxy ancestry selection method. Plos One. 8: e73971. PMID 24066090 DOI: 10.1371/Journal.Pone.0073971  0.543
2013 Poznik GD, Henn BM, Yee MC, Sliwerska E, Euskirchen GM, Lin AA, Snyder M, Quintana-Murci L, Kidd JM, Underhill PA, Bustamante CD. Sequencing Y chromosomes resolves discrepancy in time to common ancestor of males versus females. Science (New York, N.Y.). 341: 562-5. PMID 23908239 DOI: 10.1126/Science.1237619  0.368
2013 Botigué LR, Henn BM, Gravel S, Maples BK, Gignoux CR, Corona E, Atzmon G, Burns E, Ostrer H, Flores C, Bertranpetit J, Comas D, Bustamante CD. Gene flow from North Africa contributes to differential human genetic diversity in southern Europe. Proceedings of the National Academy of Sciences of the United States of America. 110: 11791-6. PMID 23733930 DOI: 10.1073/Pnas.1306223110  0.484
2012 Casto AM, Henn BM, Kidd JM, Bustamante CD, Feldman MW. A tale of two haplotypes: the EDA2R/AR Intergenic region is the most divergent genomic segment between Africans and East Asians in the human genome. Human Biology. 84: 641-94. PMID 23959643 DOI: 10.3378/027.084.0604  0.52
2012 Henn BM, Cavalli-Sforza LL, Feldman MW. The great human expansion. Proceedings of the National Academy of Sciences of the United States of America. 109: 17758-64. PMID 23077256 DOI: 10.1007/S12045-019-0830-4  0.616
2012 Pickrell JK, Patterson N, Barbieri C, Berthold F, Gerlach L, Güldemann T, Kure B, Mpoloka SW, Nakagawa H, Naumann C, Lipson M, Loh PR, Lachance J, Mountain J, Bustamante CD, ... ... Henn BM, et al. The genetic prehistory of southern Africa. Nature Communications. 3: 1143. PMID 23072811 DOI: 10.1038/Ncomms2140  0.611
2012 Granka JM, Henn BM, Gignoux CR, Kidd JM, Bustamante CD, Feldman MW. Limited evidence for classic selective sweeps in African populations. Genetics. 192: 1049-64. PMID 22960214 DOI: 10.1534/Genetics.112.144071  0.534
2012 Campbell CL, Palamara PF, Dubrovsky M, Botigué LR, Fellous M, Atzmon G, Oddoux C, Pearlman A, Hao L, Henn BM, Burns E, Bustamante CD, Comas D, Friedman E, Pe'er I, et al. North African Jewish and non-Jewish populations form distinctive, orthogonal clusters. Proceedings of the National Academy of Sciences of the United States of America. 109: 13865-70. PMID 22869716 DOI: 10.1073/Pnas.1204840109  0.474
2012 Henn BM, Hon L, Macpherson JM, Eriksson N, Saxonov S, Pe'er I, Mountain JL. Cryptic distant relatives are common in both isolated and cosmopolitan genetic samples. Plos One. 7: e34267. PMID 22509285 DOI: 10.1371/Journal.Pone.0034267  0.55
2012 Keller A, Graefen A, Ball M, Matzas M, Boisguerin V, Maixner F, Leidinger P, Backes C, Khairat R, Forster M, Stade B, Franke A, Mayer J, Spangler J, McLaughlin S, ... ... Henn B, et al. New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing. Nature Communications. 3: 698. PMID 22426219 DOI: 10.1038/Ncomms1701  0.376
2012 Henn BM, Botigué LR, Gravel S, Wang W, Brisbin A, Byrnes JK, Fadhlaoui-Zid K, Zalloua PA, Moreno-Estrada A, Bertranpetit J, Bustamante CD, Comas D. Genomic ancestry of North Africans supports back-to-Africa migrations. Plos Genetics. 8: e1002397. PMID 22253600 DOI: 10.1371/Journal.Pgen.1002397  0.559
2011 Gravel S, Henn BM, Gutenkunst RN, Indap AR, Marth GT, Clark AG, Yu F, Gibbs RA, Bustamante CD. Demographic history and rare allele sharing among human populations. Proceedings of the National Academy of Sciences of the United States of America. 108: 11983-8. PMID 21730125 DOI: 10.1073/Pnas.1019276108  0.587
2011 Gignoux CR, Henn BM, Mountain JL. Rapid, global demographic expansions after the origins of agriculture. Proceedings of the National Academy of Sciences of the United States of America. 108: 6044-9. PMID 21444824 DOI: 10.1073/Pnas.0914274108  0.525
2011 Henn BM, Gignoux CR, Jobin M, Granka JM, Macpherson JM, Kidd JM, Rodríguez-Botigué L, Ramachandran S, Hon L, Brisbin A, Lin AA, Underhill PA, Comas D, Kidd KK, Norman PJ, et al. Hunter-gatherer genomic diversity suggests a southern African origin for modern humans. Proceedings of the National Academy of Sciences of the United States of America. 108: 5154-62. PMID 21383195 DOI: 10.1073/Pnas.1017511108  0.601
2011 Henn BM, Bustamante CD, Mountain JL, Feldman MW. Reply to Hublin and Klein: Locating a geographic point of dispersion in Africa for contemporary humans Proceedings of the National Academy of Sciences of the United States of America. 108: E278. DOI: 10.1073/Pnas.1107300108  0.461
2010 Bustamante CD, Henn BM. Human origins: Shadows of early migrations. Nature. 468: 1044-5. PMID 21179156 DOI: 10.1038/4681044A  0.434
2010 Henn BM, Gravel S, Moreno-Estrada A, Acevedo-Acevedo S, Bustamante CD. Fine-scale population structure and the era of next-generation sequencing. Human Molecular Genetics. 19: R221-6. PMID 20876616 DOI: 10.1093/Hmg/Ddq403  0.597
2010 Chiaroni J, King RJ, Myres NM, Henn BM, Ducourneau A, Mitchell MJ, Boetsch G, Sheikha I, Lin AA, Nik-Ahd M, Ahmad J, Lattanzi F, Herrera RJ, Ibrahim ME, Brody A, et al. The emergence of Y-chromosome haplogroup J1e among Arabic-speaking populations. European Journal of Human Genetics : Ejhg. 18: 348-53. PMID 19826455 DOI: 10.1038/Ejhg.2009.166  0.438
2009 Henn BM, Gignoux CR, Feldman MW, Mountain JL. Characterizing the time dependency of human mitochondrial DNA mutation rate estimates. Molecular Biology and Evolution. 26: 217-30. PMID 18984905 DOI: 10.1093/Molbev/Msn244  0.344
2008 Henn BM, Gignoux C, Lin AA, Oefner PJ, Shen P, Scozzari R, Cruciani F, Tishkoff SA, Mountain JL, Underhill PA. Y-chromosomal evidence of a pastoralist migration through Tanzania to southern Africa. Proceedings of the National Academy of Sciences of the United States of America. 105: 10693-8. PMID 18678889 DOI: 10.1073/Pnas.0801184105  0.43
2007 Tishkoff SA, Gonder MK, Henn BM, Mortensen H, Knight A, Gignoux C, Fernandopulle N, Lema G, Nyambo TB, Ramakrishnan U, Reed FA, Mountain JL. History of click-speaking populations of Africa inferred from mtDNA and Y chromosome genetic variation. Molecular Biology and Evolution. 24: 2180-95. PMID 17656633 DOI: 10.1093/Molbev/Msm155  0.705
2003 Knight A, Underhill PA, Mortensen HM, Zhivotovsky LA, Lin AA, Henn BM, Louis D, Ruhlen M, Mountain JL. African Y chromosome and mtDNA divergence provides insight into the history of click languages. Current Biology : Cb. 13: 464-73. PMID 12646128 DOI: 10.1016/S0960-9822(03)00130-1  0.306
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