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Wulan Deng, Ph.D. - Publications

Affiliations: 
2012 Biology University of Pennsylvania, Philadelphia, PA, United States 
Area:
Molecular Biology, Genetics
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21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Wang Z, Wang B, Niu D, Yin C, Bi Y, Cattoglio C, Loh KM, Lavis LD, Ge H, Deng W. Mesoscale chromatin confinement facilitates target search of pioneer transcription factors in live cells. Nature Structural & Molecular Biology. PMID 39367253 DOI: 10.1038/s41594-024-01385-5  0.463
2021 Wang Z, Deng W. Dynamic transcription regulation at the single-molecule level. Developmental Biology. 482: 67-81. PMID 34896367 DOI: 10.1016/j.ydbio.2021.11.004  0.39
2017 Deng W, Blobel GA. Detecting Long-Range Enhancer-Promoter Interactions by Quantitative Chromosome Conformation Capture. Methods in Molecular Biology (Clifton, N.J.). 1468: 51-62. PMID 27662870 DOI: 10.1007/978-1-4939-4035-6_6  0.576
2016 Breda L, Motta I, Lourenco S, Gemmo C, Deng W, Rupon JW, Abdulmalik OY, Manwani D, Blobel GA, Rivella S. Forced chromatin looping raises fetal hemoglobin in adult sickle cells to higher levels than pharmacologic inducers. Blood. PMID 27405777 DOI: 10.1182/Blood-2016-01-691089  0.661
2015 Knight SC, Xie L, Deng W, Guglielmi B, Witkowsky LB, Bosanac L, Zhang ET, El Beheiry M, Masson JB, Dahan M, Liu Z, Doudna JA, Tjian R. Dynamics of CRISPR-Cas9 genome interrogation in living cells. Science (New York, N.Y.). 350: 823-6. PMID 26564855 DOI: 10.1126/Science.Aac6572  0.422
2015 Deng W, Shi X, Tjian R, Lionnet T, Singer RH. CASFISH: CRISPR/Cas9-mediated in situ labeling of genomic loci in fixed cells. Proceedings of the National Academy of Sciences of the United States of America. 112: 11870-5. PMID 26324940 DOI: 10.1073/Pnas.1515692112  0.386
2014 Deng W, Rupon JW, Krivega I, Breda L, Motta I, Jahn KS, Reik A, Gregory PD, Rivella S, Dean A, Blobel GA. Reactivation of developmentally silenced globin genes by forced chromatin looping. Cell. 158: 849-60. PMID 25126789 DOI: 10.1016/J.Cell.2014.05.050  0.708
2014 Deng W, Blobel GA. Manipulating nuclear architecture. Current Opinion in Genetics & Development. 25: 1-7. PMID 24584091 DOI: 10.1016/J.Gde.2013.10.014  0.619
2014 Breda L, Rupon JW, Motta I, Deng W, Blobel GA, Rivella S. Comparing Strategies to Reactivate Fetal Globin Expression for the Treatment of Beta-Globinopathies Blood. 124: 333-333. DOI: 10.1182/Blood.V124.21.333.333  0.644
2013 Rupon JW, Deng W, Wang H, Gregory PD, Reik A, Dean A, Blobel GA. Using Forced Chromatin Looping To Overcome Developmental Silencing Of Embryonic and Fetal β-Type Globin Genes In Adult Erythroid Cells Blood. 122: 433-433. DOI: 10.1182/Blood.V122.21.433.433  0.693
2013 Deng W, Rupon JW, Wang H, Reik A, Gregory PD, Blobel GA. Controlling long-range genomic interactions to reprogram the β-globin locus Epigenetics & Chromatin. 6. DOI: 10.1182/Blood.V120.21.280.280  0.714
2012 Stamatoyannopoulos JA, Snyder M, Hardison R, Ren B, Gingeras T, Gilbert DM, Groudine M, Bender M, Kaul R, Canfield T, Giste E, Johnson A, Zhang M, Balasundaram G, ... ... Deng W, et al. An encyclopedia of mouse DNA elements (Mouse ENCODE). Genome Biology. 13: 418. PMID 22889292 DOI: 10.1186/Gb-2012-13-8-418  0.539
2012 Deng W, Lee J, Wang H, Miller J, Reik A, Gregory PD, Dean A, Blobel GA. Controlling long-range genomic interactions at a native locus by targeted tethering of a looping factor. Cell. 149: 1233-44. PMID 22682246 DOI: 10.1016/J.Cell.2012.03.051  0.718
2012 Deng W, Rupon JW, Wang H, Reik A, Gregory PD, Blobel GA. Controlling Long-Range Genomic Interactions to Reprogram the β-Globin Locus Blood. 120: 280-280. DOI: 10.1182/blood.v120.21.280.280  0.691
2011 Lamonica JM, Deng W, Kadauke S, Campbell AE, Gamsjaeger R, Wang H, Cheng Y, Billin AN, Hardison RC, Mackay JP, Blobel GA. Bromodomain protein Brd3 associates with acetylated GATA1 to promote its chromatin occupancy at erythroid target genes. Proceedings of the National Academy of Sciences of the United States of America. 108: E159-68. PMID 21536911 DOI: 10.1073/Pnas.1102140108  0.697
2010 Deng W, Blobel GA. Do chromatin loops provide epigenetic gene expression states? Current Opinion in Genetics & Development. 20: 548-54. PMID 20598523 DOI: 10.1016/J.Gde.2010.06.007  0.688
2010 Deng W, Gregory PD, Reik A, Blobel G. Manipulating Higher Order Chromatin Structure of the β-Globin Locus by Targeted Tethering of a “looping” Factor Blood. 116: 647-647. DOI: 10.1182/Blood.V116.21.647.647  0.675
2010 Lamonica JM, Kadauke S, Deng W, Blobel G. Acetylation-Dependent Interaction of GATA-1 with the Potential Mitotic “Bookmarking” Protein Brd3. Blood. 116: 2598-2598. DOI: 10.1182/Blood.V116.21.2598.2598  0.707
2009 Cheng Y, Wu W, Kumar SA, Yu D, Deng W, Tripic T, King DC, Chen KB, Zhang Y, Drautz D, Giardine B, Schuster SC, Miller W, Chiaromonte F, Zhang Y, et al. Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression. Genome Research. 19: 2172-84. PMID 19887574 DOI: 10.1101/Gr.098921.109  0.725
2009 Tripic T, Deng W, Cheng Y, Zhang Y, Vakoc CR, Gregory GD, Hardison RC, Blobel GA. SCL and associated proteins distinguish active from repressive GATA transcription factor complexes. Blood. 113: 2191-201. PMID 19011221 DOI: 10.1182/Blood-2008-07-169417  0.732
2007 Zhou F, Wu G, Deng W, Pu Y, Wei C, Li Y. Interaction of rice dwarf virus outer capsid P8 protein with rice glycolate oxidase mediates relocalization of P8. Febs Letters. 581: 34-40. PMID 17174956 DOI: 10.1016/J.Febslet.2006.11.073  0.305
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