| Year |
Citation |
Score |
| 2024 |
Han S, Guiberson ER, Li Y, Sonnenburg JL. High-throughput identification of gut microbiome-dependent metabolites. Nature Protocols. PMID 38740909 DOI: 10.1038/s41596-024-00980-6 |
0.739 |
|
| 2023 |
Voogdt CGP, Tripathi S, Bassler SO, McKeithen-Mead SA, Guiberson ER, Koumoutsi A, Bravo AM, Buie C, Zimmermann M, Sonnenburg JL, Typas A, Deutschbauer AM, Shiver AL, Huang KC. Randomly barcoded transposon mutant libraries for gut commensals II: Applying libraries for functional genetics. Cell Reports. 43: 113519. PMID 38142398 DOI: 10.1016/j.celrep.2023.113519 |
0.732 |
|
| 2023 |
Gerrick ER, Zlitni S, West PT, Carter MM, Mechler CM, Olm MR, Caffrey EB, Li JA, Higginbottom SK, Severyn CJ, Kracke F, Spormann AM, Sonnenburg JL, Bhatt AS, Howitt MR. Metabolic diversity in commensal protists regulates intestinal immunity and trans-kingdom competition. Cell. PMID 38096822 DOI: 10.1016/j.cell.2023.11.018 |
0.344 |
|
| 2023 |
Olm MR, Spencer SP, Silva EL, Sonnenburg JL. Metagenomic Immunoglobulin Sequencing (MIG-Seq) Exposes Patterns of IgA Antibody Binding in the Healthy Human Gut Microbiome. Biorxiv : the Preprint Server For Biology. PMID 38045399 DOI: 10.1101/2023.11.21.568153 |
0.313 |
|
| 2023 |
Shiver AL, Sun J, Culver R, Violette A, Wynter C, Nieckarz M, Mattiello SP, Sekhon PK, Friess L, Carlson HK, Wong D, Higginbottom S, Weglarz M, Wang W, Knapp BD, ... ... Sonnenburg J, et al. A mutant fitness compendium in Bifidobacteria reveals molecular determinants of colonization and host-microbe interactions. Biorxiv : the Preprint Server For Biology. PMID 37693407 DOI: 10.1101/2023.08.29.555234 |
0.335 |
|
| 2023 |
Pruss KM, Chen H, Liu Y, Van Treuren W, Higginbottom SK, Jarman JB, Fischer CR, Mak J, Wong B, Cowan TM, Fischbach MA, Sonnenburg JL, Dodd D. Host-microbe co-metabolism via MCAD generates circulating metabolites including hippuric acid. Nature Communications. 14: 512. PMID 36720857 DOI: 10.1038/s41467-023-36138-3 |
0.353 |
|
| 2022 |
Cheng AG, Ho PY, Aranda-Díaz A, Jain S, Yu FB, Meng X, Wang M, Iakiviak M, Nagashima K, Zhao A, Murugkar P, Patil A, Atabakhsh K, Weakley A, Yan J, ... ... Sonnenburg JL, et al. Design, construction, and in vivo augmentation of a complex gut microbiome. Cell. PMID 36070752 DOI: 10.1016/j.cell.2022.08.003 |
0.309 |
|
| 2021 |
Han S, Van Treuren W, Fischer CR, Merrill BD, DeFelice BC, Sanchez JM, Higginbottom SK, Guthrie L, Fall LA, Dodd D, Fischbach MA, Sonnenburg JL. A metabolomics pipeline for the mechanistic interrogation of the gut microbiome. Nature. 595: 415-420. PMID 34262212 DOI: 10.1038/s41586-021-03707-9 |
0.355 |
|
| 2021 |
Olm MR, Sonnenburg JL. Ancient human faeces reveal gut microbes of the past. Nature. PMID 34007025 DOI: 10.1038/d41586-021-01266-7 |
0.315 |
|
| 2020 |
Mars RAT, Yang Y, Ward T, Houtti M, Priya S, Lekatz HR, Tang X, Sun Z, Kalari KR, Korem T, Bhattarai Y, Zheng T, Bar N, Frost G, Johnson AJ, ... ... Sonnenburg J, et al. Longitudinal Multi-omics Reveals Subset-Specific Mechanisms Underlying Irritable Bowel Syndrome. Cell. PMID 32916129 DOI: 10.1016/J.Cell.2020.08.007 |
0.428 |
|
| 2020 |
Hryckowian AJ, Merrill BD, Porter NT, Van Treuren W, Nelson EJ, Garlena RA, Russell DA, Martens EC, Sonnenburg JL. Bacteroides thetaiotaomicron-Infecting Bacteriophage Isolates Inform Sequence-Based Host Range Predictions. Cell Host & Microbe. PMID 32652063 DOI: 10.1016/J.Chom.2020.06.011 |
0.389 |
|
| 2020 |
Porter NT, Hryckowian AJ, Merrill BD, Fuentes JJ, Gardner JO, Glowacki RWP, Singh S, Crawford RD, Snitkin ES, Sonnenburg JL, Martens EC. Phase-variable capsular polysaccharides and lipoproteins modify bacteriophage susceptibility in Bacteroides thetaiotaomicron. Nature Microbiology. PMID 32601452 DOI: 10.1038/S41564-020-0746-5 |
0.375 |
|
| 2020 |
Fragiadakis GK, Wastyk HC, Robinson JL, Sonnenburg ED, Sonnenburg JL, Gardner CD. Long-term dietary intervention reveals resilience of the gut microbiota despite changes in diet and weight. The American Journal of Clinical Nutrition. PMID 32186326 DOI: 10.1093/Ajcn/Nqaa046 |
0.301 |
|
| 2020 |
Sinha SR, Haileselassie Y, Nguyen LP, Tropini C, Wang M, Becker LS, Sim D, Jarr K, Spear ET, Singh G, Namkoong H, Bittinger K, Fischbach MA, Sonnenburg JL, Habtezion A. Dysbiosis-Induced Secondary Bile Acid Deficiency Promotes Intestinal Inflammation. Cell Host & Microbe. PMID 32101703 DOI: 10.1016/J.Chom.2020.01.021 |
0.342 |
|
| 2020 |
Liou CS, Sirk SJ, Diaz CAC, Klein AP, Fischer CR, Higginbottom SK, Erez A, Donia MS, Sonnenburg JL, Sattely ES. A Metabolic Pathway for Activation of Dietary Glucosinolates by a Human Gut Symbiont. Cell. 180: 717-728.e19. PMID 32084341 DOI: 10.1016/J.Cell.2020.01.023 |
0.393 |
|
| 2020 |
Oliveira RA, Ng KM, Correia MB, Cabral V, Shi H, Sonnenburg JL, Huang KC, Xavier KB. Klebsiella michiganensis transmission enhances resistance to Enterobacteriaceae gut invasion by nutrition competition. Nature Microbiology. PMID 31959968 DOI: 10.1038/S41564-019-0658-4 |
0.364 |
|
| 2019 |
Guo CJ, Allen BM, Hiam KJ, Dodd D, Van Treuren W, Higginbottom S, Nagashima K, Fischer CR, Sonnenburg JL, Spitzer MH, Fischbach MA. Depletion of microbiome-derived molecules in the host using genetics. Science (New York, N.Y.). 366. PMID 31831639 DOI: 10.1126/Science.Aav1282 |
0.393 |
|
| 2019 |
Ng KM, Aranda-Díaz A, Tropini C, Frankel MR, Van Treuren W, O'Laughlin CT, Merrill BD, Yu FB, Pruss KM, Oliveira RA, Higginbottom SK, Neff NF, Fischbach MA, Xavier KB, Sonnenburg JL, et al. Recovery of the Gut Microbiota after Antibiotics Depends on Host Diet, Community Context, and Environmental Reservoirs. Cell Host & Microbe. 26: 650-665.e4. PMID 31726029 DOI: 10.1016/J.Chom.2019.10.011 |
0.39 |
|
| 2019 |
Joglekar P, Ding H, Canales-Herrerias P, Pasricha PJ, Sonnenburg JL, Peterson DA. Intestinal IgA Regulates Expression of a Fructan Polysaccharide Utilization Locus in Colonizing Gut Commensal Bacteroides thetaiotaomicron. Mbio. 10. PMID 31690674 DOI: 10.1128/Mbio.02324-19 |
0.449 |
|
| 2019 |
Sonnenburg JL, Sonnenburg ED. Vulnerability of the industrialized microbiota. Science (New York, N.Y.). 366. PMID 31649168 DOI: 10.1126/Science.Aaw9255 |
0.42 |
|
| 2019 |
Spencer SP, Fragiadakis GK, Sonnenburg JL. Pursuing Human-Relevant Gut Microbiota-Immune Interactions. Immunity. 51: 225-239. PMID 31433970 DOI: 10.1016/J.Immuni.2019.08.002 |
0.43 |
|
| 2019 |
Camilleri M, Lyle BJ, Madsen KL, Sonnenburg JL, Verbeke K, Wu GD. Role for Diet in Normal Gut Barrier Function: Developing Guidance within the Framework of Food Labeling Regulations. American Journal of Physiology. Gastrointestinal and Liver Physiology. PMID 31125257 DOI: 10.1152/Ajpgi.00063.2019 |
0.383 |
|
| 2019 |
Sonnenburg ED, Sonnenburg JL. The ancestral and industrialized gut microbiota and implications for human health. Nature Reviews. Microbiology. 17: 383-390. PMID 31089293 DOI: 10.1038/S41579-019-0191-8 |
0.406 |
|
| 2019 |
Saffouri GB, Shields-Cutler RR, Chen J, Yang Y, Lekatz HR, Hale VL, Cho JM, Battaglioli EJ, Bhattarai Y, Thompson KJ, Kalari KK, Behera G, Berry JC, Peters SA, Patel R, ... ... Sonnenburg JL, et al. Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders. Nature Communications. 10: 2012. PMID 31043597 DOI: 10.1038/S41467-019-09964-7 |
0.326 |
|
| 2019 |
Napier BA, Andres-Terre M, Massis LM, Hryckowian AJ, Higginbottom SK, Cumnock K, Casey KM, Haileselassie B, Lugo KA, Schneider DS, Sonnenburg JL, Monack DM. Western diet regulates immune status and the response to LPS-driven sepsis independent of diet-associated microbiome. Proceedings of the National Academy of Sciences of the United States of America. 116: 3688-3694. PMID 30808756 DOI: 10.1073/Pnas.1814273116 |
0.319 |
|
| 2019 |
Sinha SR, Haileselassie Y, Nguyen L, tropini c, Becker LS, Sim D, Bittinger K, Sonnenburg J, Habtezion A. Su1880 – Secondary Bile Acids Protect Against Intestinal Inflammation Via Bile Acid Tgr5 Receptor Gastroenterology. 156: S-647. DOI: 10.1016/S0016-5085(19)38517-8 |
0.313 |
|
| 2018 |
Jha AR, Davenport ER, Gautam Y, Bhandari D, Tandukar S, Ng KM, Fragiadakis GK, Holmes S, Gautam GP, Leach J, Sherchand JB, Bustamante CD, Sonnenburg JL. Gut microbiome transition across a lifestyle gradient in Himalaya. Plos Biology. 16: e2005396. PMID 30439937 DOI: 10.1371/Journal.Pbio.2005396 |
0.396 |
|
| 2018 |
Sonnenburg J, Sonnenburg E. A Microbiota Assimilation. Cell Metabolism. 28: 675-677. PMID 30403987 DOI: 10.1016/J.Cmet.2018.10.010 |
0.315 |
|
| 2018 |
Battaglioli EJ, Hale VL, Chen J, Jeraldo P, Ruiz-Mojica C, Schmidt BA, Rekdal VM, Till LM, Huq L, Smits SA, Moor WJ, Jones-Hall Y, Smyrk T, Khanna S, Pardi DS, ... ... Sonnenburg JL, et al. uses amino acids associated with gut microbial dysbiosis in a subset of patients with diarrhea. Science Translational Medicine. 10. PMID 30355801 DOI: 10.1126/Scitranslmed.Aam7019 |
0.403 |
|
| 2018 |
Klurfeld DM, Davis CD, Karp RW, Allen-Vercoe E, Chang EB, Chaissaing B, Fahey GC, Hamaker BR, Holscher HD, Lampe JW, Marette A, Martens E, O'Keefe SJ, Rose DJ, Saarela M, ... ... Sonnenburg JL, et al. Considerations for Best Practices in Studies of Fiber or Other Dietary Components and the Intestinal Microbiome. American Journal of Physiology. Endocrinology and Metabolism. PMID 30130151 DOI: 10.1152/Ajpendo.00058.2018 |
0.385 |
|
| 2018 |
Fragiadakis GK, Smits SA, Sonnenburg ED, Van Treuren W, Reid G, Knight R, Manjurano A, Changalucha J, Dominguez-Bello MG, Leach J, Sonnenburg JL. Links between environment, diet, and the hunter-gatherer microbiome. Gut Microbes. 1-12. PMID 30118385 DOI: 10.1080/19490976.2018.1494103 |
0.421 |
|
| 2018 |
Jacobson A, Lam L, Rajendram M, Tamburini F, Honeycutt J, Pham T, Van Treuren W, Pruss K, Stabler SR, Lugo K, Bouley DM, Vilches-Moure JG, Smith M, Sonnenburg JL, Bhatt AS, et al. A Gut Commensal-Produced Metabolite Mediates Colonization Resistance to Salmonella Infection. Cell Host & Microbe. PMID 30057174 DOI: 10.1016/J.Chom.2018.07.002 |
0.393 |
|
| 2018 |
Tropini C, Moss EL, Merrill BD, Ng KM, Higginbottom SK, Casavant EP, Gonzalez CG, Fremin B, Bouley DM, Elias JE, Bhatt AS, Huang KC, Sonnenburg JL. Transient Osmotic Perturbation Causes Long-Term Alteration to the Gut Microbiota. Cell. 173: 1742-1754.e17. PMID 29906449 DOI: 10.1016/J.Cell.2018.05.008 |
0.43 |
|
| 2018 |
Bhattarai Y, Williams BB, Battaglioli EJ, Whitaker WR, Till L, Grover M, Linden DR, Akiba Y, Kandimalla KK, Zachos NC, Kaunitz JD, Sonnenburg JL, Fischbach MA, Farrugia G, Kashyap PC. Gut Microbiota-Produced Tryptamine Activates an Epithelial G-Protein-Coupled Receptor to Increase Colonic Secretion. Cell Host & Microbe. 23: 775-785.e5. PMID 29902441 DOI: 10.1016/J.Chom.2018.05.004 |
0.376 |
|
| 2018 |
Shepherd ES, DeLoache WC, Pruss KM, Whitaker WR, Sonnenburg JL. An exclusive metabolic niche enables strain engraftment in the gut microbiota. Nature. PMID 29743671 DOI: 10.1038/S41586-018-0092-4 |
0.351 |
|
| 2018 |
Hryckowian AJ, Van Treuren W, Smits SA, Davis NM, Gardner JO, Bouley DM, Sonnenburg JL. Microbiota-accessible carbohydrates suppress Clostridium difficile infection in a murine model. Nature Microbiology. PMID 29686297 DOI: 10.1038/S41564-018-0150-6 |
0.378 |
|
| 2018 |
Tropini C, Sonnenburg J, Huang K, Ng K. Mechanical Perturbations to the Gut Microbiota Biophysical Journal. 114. DOI: 10.1016/J.Bpj.2017.11.1842 |
0.378 |
|
| 2017 |
Dodd D, Spitzer MH, Van Treuren W, Merrill BD, Hryckowian AJ, Higginbottom SK, Le A, Cowan TM, Nolan GP, Fischbach MA, Sonnenburg JL. A gut bacterial pathway metabolizes aromatic amino acids into nine circulating metabolites. Nature. PMID 29168502 DOI: 10.1038/Nature24661 |
0.437 |
|
| 2017 |
Smits SA, Leach J, Sonnenburg ED, Gonzalez CG, Lichtman JS, Reid G, Knight R, Manjurano A, Changalucha J, Elias JE, Dominguez-Bello MG, Sonnenburg JL. Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania. Science (New York, N.Y.). 357: 802-806. PMID 28839072 DOI: 10.1126/Science.Aan4834 |
0.319 |
|
| 2017 |
Whitaker WR, Shepherd ES, Sonnenburg JL. Tunable Expression Tools Enable Single-Cell Strain Distinction in the Gut Microbiome. Cell. 169: 538-546.e12. PMID 28431251 DOI: 10.1016/J.Cell.2017.03.041 |
0.374 |
|
| 2017 |
Tropini C, Earle KA, Huang KC, Sonnenburg JL. The Gut Microbiome: Connecting Spatial Organization to Function. Cell Host & Microbe. 21: 433-442. PMID 28407481 DOI: 10.1016/J.Chom.2017.03.010 |
0.395 |
|
| 2017 |
Battaglioli E, Hale V, Chen J, Jeraldo P, Rekdal VM, Huq L, Smits SA, Smyrk T, Khanna S, Pardi DS, Grover M, Patel R, Nelson H, Chia N, Sonnenburg J, et al. Prophylactic Fecal Microbial Transplant Restores Clostridium Difficile Colonization Resistance in a Dysbiotic Subset of Diarrhea Associated Human Microbial Communities Modeled in Germ Free Mice Gastroenterology. 152. DOI: 10.1016/S0016-5085(17)31424-5 |
0.347 |
|
| 2016 |
Hryckowian AJ, Pruss KM, Sonnenburg JL. The emerging metabolic view of Clostridium difficile pathogenesis. Current Opinion in Microbiology. 35: 42-47. PMID 27997854 DOI: 10.1016/J.Mib.2016.11.006 |
0.454 |
|
| 2016 |
Devlin AS, Marcobal A, Dodd D, Nayfach S, Plummer N, Meyer T, Pollard KS, Sonnenburg JL, Fischbach MA. Modulation of a Circulating Uremic Solute via Rational Genetic Manipulation of the Gut Microbiota. Cell Host & Microbe. PMID 27916477 DOI: 10.1016/J.Chom.2016.10.021 |
0.375 |
|
| 2016 |
Smits SA, Marcobal A, Higginbottom S, Sonnenburg JL, Kashyap PC. Individualized Responses of Gut Microbiota to Dietary Intervention Modeled in Humanized Mice. Msystems. 1. PMID 27822551 DOI: 10.1128/mSystems.00098-16 |
0.317 |
|
| 2016 |
Sonnenburg JL, Bäckhed F. Diet-microbiota interactions as moderators of human metabolism. Nature. 535: 56-64. PMID 27383980 DOI: 10.1038/Nature18846 |
0.39 |
|
| 2016 |
Reigstad CS, Linden DR, Szurszewski JH, Sonnenburg JL, Farrugia G, Kashyap PC. Correlated gene expression encoding serotonin (5-HT) receptor 4 and 5-HT transporter in proximal colonic segments of mice across different colonization states and sexes. Neurogastroenterology and Motility : the Official Journal of the European Gastrointestinal Motility Society. PMID 27072889 DOI: 10.1111/Nmo.12840 |
0.325 |
|
| 2016 |
Lichtman JS, Ferreyra JA, Ng KM, Smits SA, Sonnenburg JL, Elias JE. Host-Microbiota Interactions in the Pathogenesis of Antibiotic-Associated Diseases. Cell Reports. PMID 26832403 DOI: 10.1016/J.Celrep.2016.01.009 |
0.443 |
|
| 2016 |
Sonnenburg ED, Smits SA, Tikhonov M, Higginbottom SK, Wingreen NS, Sonnenburg JL. Diet-induced extinctions in the gut microbiota compound over generations. Nature. 529: 212-5. PMID 26762459 DOI: 10.1038/Nature16504 |
0.41 |
|
| 2016 |
Whitaker W, Stanley E, Sonnenburg J. P-191 Genetic Tools for Strong Predictable Expression in the Bacteroides Genus Enable Imaging Species-Specific Difference in Localization in Response to Inflammation Inflammatory Bowel Diseases. 22: S67. DOI: 10.1097/01.Mib.0000480308.57402.51 |
0.316 |
|
| 2015 |
Lichtman JS, Alsentzer E, Jaffe M, Sprockett D, Masutani E, Ikwa E, Fragiadakis GK, Clifford D, Huang BE, Sonnenburg JL, Huang KC, Elias JE. The effect of microbial colonization on the host proteome varies by gastrointestinal location. The Isme Journal. PMID 26574685 DOI: 10.1038/Ismej.2015.187 |
0.383 |
|
| 2015 |
Earle KA, Billings G, Sigal M, Lichtman JS, Hansson GC, Elias JE, Amieva MR, Huang KC, Sonnenburg JL. Quantitative Imaging of Gut Microbiota Spatial Organization. Cell Host & Microbe. 18: 478-88. PMID 26439864 DOI: 10.1016/J.Chom.2015.09.002 |
0.432 |
|
| 2015 |
Bender KO, Garland M, Ferreyra JA, Hryckowian AJ, Child MA, Puri AW, Solow-Cordero DE, Higginbottom SK, Segal E, Banaei N, Shen A, Sonnenburg JL, Bogyo M. A small-molecule antivirulence agent for treating Clostridium difficile infection. Science Translational Medicine. 7: 306ra148. PMID 26400909 DOI: 10.1126/Scitranslmed.Aac9103 |
0.361 |
|
| 2015 |
Marcobal A, Yusufaly T, Higginbottom S, Snyder M, Sonnenburg JL, Mias GI. Metabolome progression during early gut microbial colonization of gnotobiotic mice. Scientific Reports. 5: 11589. PMID 26118551 DOI: 10.1038/Srep11589 |
0.44 |
|
| 2015 |
Lichtman JS, Sonnenburg JL, Elias JE. Monitoring host responses to the gut microbiota. The Isme Journal. 9: 1908-15. PMID 26057846 DOI: 10.1038/Ismej.2015.93 |
0.434 |
|
| 2015 |
Reigstad CS, Salmonson CE, Rainey JF, Szurszewski JH, Linden DR, Sonnenburg JL, Farrugia G, Kashyap PC. Gut microbes promote colonic serotonin production through an effect of short-chain fatty acids on enterochromaffin cells. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 29: 1395-403. PMID 25550456 DOI: 10.1096/Fj.14-259598 |
0.315 |
|
| 2015 |
Reigstad CS, Salmonson CE, Linden DR, Szurszewski JH, Sonnenburg J, Farrugia G, Kashyap PC. Tu1864 The Gut Microbiota and Sex of the Host Influence the Host Serotonergic Pathway Gastroenterology. 148: S-922. DOI: 10.1016/S0016-5085(15)33134-6 |
0.378 |
|
| 2014 |
Ferreyra JA, Wu KJ, Hryckowian AJ, Bouley DM, Weimer BC, Sonnenburg JL. Gut microbiota-produced succinate promotes C. difficile infection after antibiotic treatment or motility disturbance. Cell Host & Microbe. 16: 770-7. PMID 25498344 DOI: 10.1016/J.Chom.2014.11.003 |
0.366 |
|
| 2014 |
Martens EC, Sonnenburg JL, Relman DA. Editorial overview: insights into molecular mechanisms of microbiota. Journal of Molecular Biology. 426: 3827-9. PMID 25218944 DOI: 10.1016/J.Jmb.2014.08.021 |
0.315 |
|
| 2014 |
Sonnenburg ED, Sonnenburg JL. Starving our microbial self: the deleterious consequences of a diet deficient in microbiota-accessible carbohydrates. Cell Metabolism. 20: 779-86. PMID 25156449 DOI: 10.1016/J.Cmet.2014.07.003 |
0.449 |
|
| 2014 |
Tong M, McHardy I, Ruegger P, Goudarzi M, Kashyap PC, Haritunians T, Li X, Graeber TG, Schwager E, Huttenhower C, Fornace AJ, Sonnenburg JL, McGovern DP, Borneman J, Braun J. Reprograming of gut microbiome energy metabolism by the FUT2 Crohn's disease risk polymorphism. The Isme Journal. 8: 2193-206. PMID 24781901 DOI: 10.1038/Ismej.2014.64 |
0.399 |
|
| 2014 |
Ferreyra JA, Ng KM, Sonnenburg JL. The Enteric Two-Step: nutritional strategies of bacterial pathogens within the gut. Cellular Microbiology. 16: 993-1003. PMID 24720567 DOI: 10.1111/Cmi.12300 |
0.416 |
|
| 2014 |
Sonnenburg ED, Sonnenburg JL. Gut microbes take their vitamins. Cell Host & Microbe. 15: 5-6. PMID 24439893 DOI: 10.1016/J.Chom.2013.12.011 |
0.327 |
|
| 2014 |
Padler-Karavani V, Hurtado-Ziola N, Chang YC, Sonnenburg JL, Ronaghy A, Yu H, Verhagen A, Nizet V, Chen X, Varki N, Varki A, Angata T. Rapid evolution of binding specificities and expression patterns of inhibitory CD33-related Siglecs in primates. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 28: 1280-93. PMID 24308974 DOI: 10.1096/Fj.13-241497 |
0.759 |
|
| 2014 |
Reigstad CS, Salmonson CE, Linden DR, Szurszewski JH, Sonnenburg JL, Farrugia G, Kashyap PC. 25 Colonization of Germ-Free Mice by Human Gut Microbiota Alters Colonic Morphology and Increases Tph1 Expression Likely Contributing to Altered Colonic Contractility Following Colonization Gastroenterology. 146: S-7-S-8. DOI: 10.1016/S0016-5085(14)60025-1 |
0.399 |
|
| 2013 |
McHardy IH, Goudarzi M, Tong M, Ruegger PM, Schwager E, Weger JR, Graeber TG, Sonnenburg JL, Horvath S, Huttenhower C, McGovern DP, Fornace AJ, Borneman J, Braun J. Integrative analysis of the microbiome and metabolome of the human intestinal mucosal surface reveals exquisite inter-relationships. Microbiome. 1: 17. PMID 24450808 DOI: 10.1186/2049-2618-1-17 |
0.421 |
|
| 2013 |
Kashyap PC, Marcobal A, Ursell LK, Smits SA, Sonnenburg ED, Costello EK, Higginbottom SK, Domino SE, Holmes SP, Relman DA, Knight R, Gordon JI, Sonnenburg JL. Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. Proceedings of the National Academy of Sciences of the United States of America. 110: 17059-64. PMID 24062455 DOI: 10.1073/Pnas.1306070110 |
0.408 |
|
| 2013 |
Ng KM, Ferreyra JA, Higginbottom SK, Lynch JB, Kashyap PC, Gopinath S, Naidu N, Choudhury B, Weimer BC, Monack DM, Sonnenburg JL. Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens. Nature. 502: 96-9. PMID 23995682 DOI: 10.1038/Nature12503 |
0.456 |
|
| 2013 |
Lichtman JS, Marcobal A, Sonnenburg JL, Elias JE. Host-centric proteomics of stool: a novel strategy focused on intestinal responses to the gut microbiota. Molecular & Cellular Proteomics : McP. 12: 3310-8. PMID 23982161 DOI: 10.1074/Mcp.M113.029967 |
0.463 |
|
| 2013 |
Wieland Brown LC, Penaranda C, Kashyap PC, Williams BB, Clardy J, Kronenberg M, Sonnenburg JL, Comstock LE, Bluestone JA, Fischbach MA. Production of α-galactosylceramide by a prominent member of the human gut microbiota. Plos Biology. 11: e1001610. PMID 23874157 DOI: 10.1371/Journal.Pbio.1001610 |
0.44 |
|
| 2013 |
Marcobal A, Kashyap PC, Nelson TA, Aronov PA, Donia MS, Spormann A, Fischbach MA, Sonnenburg JL. A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice. The Isme Journal. 7: 1933-43. PMID 23739052 DOI: 10.1038/Ismej.2013.89 |
0.482 |
|
| 2013 |
Marcobal A, Southwick AM, Earle KA, Sonnenburg JL. A refined palate: bacterial consumption of host glycans in the gut. Glycobiology. 23: 1038-46. PMID 23720460 DOI: 10.1093/Glycob/Cwt040 |
0.424 |
|
| 2013 |
Kashyap PC, Marcobal A, Ursell LK, Larauche M, Duboc H, Earle KA, Sonnenburg ED, Ferreyra JA, Higginbottom SK, Million M, Tache Y, Pasricha PJ, Knight R, Farrugia G, Sonnenburg JL. Complex interactions among diet, gastrointestinal transit, and gut microbiota in humanized mice. Gastroenterology. 144: 967-77. PMID 23380084 DOI: 10.1053/J.Gastro.2013.01.047 |
0.409 |
|
| 2013 |
McHardy I, Goudarzi M, Tong M, Ruegger P, Horvath S, Sonnenburg J, Graeber T, Huttenhower C, Borneman J, McGovern DP, Fornace A, Braun J. Tu1983 Comprehensive Inter-Omic Analysis Reveals Exquisite Metabolite-Driven Microbial Relationships Gastroenterology. 144: S-896-S-897. DOI: 10.1016/S0016-5085(13)63339-9 |
0.341 |
|
| 2013 |
Kashyap PC, Marcobal A, Higginbottom S, Smits SA, Sonnenburg J. 481 Individualized Responses of Gut Microbiota to Dietary Intervention Modeled in Humanized Mice Gastroenterology. 144. DOI: 10.1016/S0016-5085(13)60325-X |
0.43 |
|
| 2012 |
Rath CM, Alexandrov T, Higginbottom SK, Song J, Milla ME, Fischbach MA, Sonnenburg JL, Dorrestein PC. Molecular analysis of model gut microbiotas by imaging mass spectrometry and nanodesorption electrospray ionization reveals dietary metabolite transformations. Analytical Chemistry. 84: 9259-67. PMID 23009651 DOI: 10.1021/Ac302039U |
0.391 |
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| 2012 |
Lynch JB, Sonnenburg JL. Prioritization of a plant polysaccharide over a mucus carbohydrate is enforced by a Bacteroides hybrid two-component system. Molecular Microbiology. 85: 478-91. PMID 22686399 DOI: 10.1111/J.1365-2958.2012.08123.X |
0.415 |
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| 2012 |
Marcobal A, Sonnenburg JL. Human milk oligosaccharide consumption by intestinal microbiota Clinical Microbiology and Infection. 18: 12-15. PMID 22647041 DOI: 10.1111/J.1469-0691.2012.03863.X |
0.367 |
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| 2012 |
Schnaar R, Paulson JC, Macauley MS, Nycholat C, Pfrengle F, Rademacher C, Mahan A, Dionne K, Suscovich T, Alter G, Katoh T, Kiwamoto T, Brummet M, Bochner B, Tiemeyer M, ... ... Sonnenburg JL, et al. Program and abstracts for the 2012 Joint Meeting of the Society for Glycobiology & American Society for Matrix Biology Glycobiology. 22: 1518-1650. DOI: 10.1093/Glycob/Cws127 |
0.705 |
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| 2012 |
Kashyap PC, Higginbottom S, Ursell L, Pasricha PJ, Knight R, Farrugia G, Sonnenburg J. Su1991 Diet-Induced Change in Gastrointestinal Transit Significantly Alters Distal Gut Microbial Communities Gastroenterology. 142. DOI: 10.1016/S0016-5085(12)62130-1 |
0.314 |
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| 2012 |
Kashyap PC, Higginbottom S, Farrugia G, Sonnenburg J. 435 Diet and Distal Gut Microbiota Interact to Alter Gastrointestinal Transit Gastroenterology. 142. DOI: 10.1016/S0016-5085(12)60370-9 |
0.33 |
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| 2011 |
Marcobal A, Barboza M, Sonnenburg ED, Pudlo N, Martens EC, Desai P, Lebrilla CB, Weimer BC, Mills DA, German JB, Sonnenburg JL. Bacteroides in the infant gut consume milk oligosaccharides via mucus-utilization pathways. Cell Host & Microbe. 10: 507-14. PMID 22036470 DOI: 10.1016/J.Chom.2011.10.007 |
0.371 |
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| 2011 |
Fischbach MA, Sonnenburg JL. Eating for two: how metabolism establishes interspecies interactions in the gut. Cell Host & Microbe. 10: 336-47. PMID 22018234 DOI: 10.1016/J.Chom.2011.10.002 |
0.368 |
|
| 2011 |
Pfeiffer JK, Sonnenburg JL. The intestinal microbiota and viral susceptibility. Frontiers in Microbiology. 2: 92. PMID 21833331 DOI: 10.3389/Fmicb.2011.00092 |
0.43 |
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| 2011 |
Bolam DN, Sonnenburg JL. Mechanistic insight into polysaccharide use within the intestinal microbiota. Gut Microbes. 2: 86-90. PMID 21637023 DOI: 10.4161/Gmic.2.2.15232 |
0.406 |
|
| 2011 |
Sonnenburg JL, Fischbach MA. Community health care: therapeutic opportunities in the human microbiome. Science Translational Medicine. 3: 78ps12. PMID 21490274 DOI: 10.1126/Scitranslmed.3001626 |
0.39 |
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| 2011 |
Nelson TA, Holmes S, Alekseyenko AV, Shenoy M, Desantis T, Wu CH, Andersen GL, Winston J, Sonnenburg J, Pasricha PJ, Spormann A. PhyloChip microarray analysis reveals altered gastrointestinal microbial communities in a rat model of colonic hypersensitivity. Neurogastroenterology and Motility : the Official Journal of the European Gastrointestinal Motility Society. 23: 169-77, e41-2. PMID 21129126 DOI: 10.1111/J.1365-2982.2010.01637.X |
0.34 |
|
| 2010 |
Sonnenburg ED, Zheng H, Joglekar P, Higginbottom SK, Firbank SJ, Bolam DN, Sonnenburg JL. Specificity of polysaccharide use in intestinal bacteroides species determines diet-induced microbiota alterations. Cell. 141: 1241-52. PMID 20603004 DOI: 10.1016/J.Cell.2010.05.005 |
0.407 |
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| 2010 |
Sonnenburg JL. Microbiology: Genetic pot luck. Nature. 464: 837-8. PMID 20376136 DOI: 10.1038/464837A |
0.316 |
|
| 2010 |
Goodrich-Blair H, Ané JM, Bever JD, Bordenstein SR, Bright M, Chaston JM, Clay K, Currie CR, Douglas AE, Gerardo N, Harrison MJ, Ley RE, McFall-Ngai M, Mukherjee A, Rader B, ... ... Sonnenburg JL, et al. Symbiosis research, technology, and education: Proceedings of the 6th International Symbiosis Society Congress held in Madison Wisconsin, USA, August 2009 Symbiosis. 51: 1-12. DOI: 10.1007/S13199-010-0076-0 |
0.373 |
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| 2009 |
Marco ML, Peters TH, Bongers RS, Molenaar D, van Hemert S, Sonnenburg JL, Gordon JI, Kleerebezem M. Lifestyle of Lactobacillus plantarum in the mouse caecum. Environmental Microbiology. 11: 2747-57. PMID 19638173 DOI: 10.1111/J.1462-2920.2009.02001.X |
0.424 |
|
| 2007 |
Lecuit M, Sonnenburg JL, Cossart P, Gordon JI. Functional genomic studies of the intestinal response to a foodborne enteropathogen in a humanized gnotobiotic mouse model. The Journal of Biological Chemistry. 282: 15065-72. PMID 17389602 DOI: 10.1074/Jbc.M610926200 |
0.398 |
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| 2006 |
Sonnenburg JL, Chen CT, Gordon JI. Genomic and metabolic studies of the impact of probiotics on a model gut symbiont and host. Plos Biology. 4: e413. PMID 17132046 DOI: 10.1371/Journal.Pbio.0040413 |
0.444 |
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| 2006 |
Sonnenburg ED, Sonnenburg JL, Manchester JK, Hansen EE, Chiang HC, Gordon JI. A hybrid two-component system protein of a prominent human gut symbiont couples glycan sensing in vivo to carbohydrate metabolism. Proceedings of the National Academy of Sciences of the United States of America. 103: 8834-9. PMID 16735464 DOI: 10.1073/Pnas.0603249103 |
0.396 |
|
| 2006 |
Bäckhed F, Ley RE, Sonnenburg JL, Gordon JI. The human intestinal microbiota and its relationship to energy balance Scandinavian Journal of Food and Nutrition. 50: 121-123. DOI: 10.1080/17482970601066546 |
0.441 |
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| 2005 |
Sonnenburg JL, Xu J, Leip DD, Chen CH, Westover BP, Weatherford J, Buhler JD, Gordon JI. Glycan foraging in vivo by an intestine-adapted bacterial symbiont. Science (New York, N.Y.). 307: 1955-9. PMID 15790854 DOI: 10.1126/Science.1109051 |
0.417 |
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| 2005 |
Bäckhed F, Ley RE, Sonnenburg JL, Peterson DA, Gordon JI. Host-bacterial mutualism in the human intestine. Science (New York, N.Y.). 307: 1915-20. PMID 15790844 DOI: 10.1126/Science.1104816 |
0.468 |
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| 2005 |
Westover BP, Buhler JD, Sonnenburg JL, Gordon JI. Operon prediction without a training set. Bioinformatics (Oxford, England). 21: 880-8. PMID 15539453 DOI: 10.1093/Bioinformatics/Bti123 |
0.305 |
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| 2004 |
Sonnenburg JL, Angenent LT, Gordon JI. Getting a grip on things: how do communities of bacterial symbionts become established in our intestine? Nature Immunology. 5: 569-73. PMID 15164016 DOI: 10.1038/Ni1079 |
0.385 |
|
| 2004 |
Sonnenburg JL, Altheide TK, Varki A. A uniquely human consequence of domain-specific functional adaptation in a sialic acid-binding receptor. Glycobiology. 14: 339-46. PMID 14693915 DOI: 10.1093/Glycob/Cwh039 |
0.756 |
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| 2004 |
Hurtado-Ziola N, Sonnenburg JL, Varki A. Differential Expression and Function of the CD33-Related Siglecs between Humans and Great Apes. Blood. 104: 1466-1466. DOI: 10.1182/Blood.V104.11.1466.1466 |
0.76 |
|
| 2002 |
Brinkman-Van der Linden EC, Sonnenburg JL, Varki A. Effects of sialic acid substitutions on recognition by Sambucus nigra agglutinin and Maackia amurensis hemagglutinin. Analytical Biochemistry. 303: 98-104. PMID 11906157 DOI: 10.1006/Abio.2001.5539 |
0.466 |
|
| 2002 |
Sonnenburg JL, van Halbeek H, Varki A. Characterization of the acid stability of glycosidically linked neuraminic acid: use in detecting de-N-acetyl-gangliosides in human melanoma. The Journal of Biological Chemistry. 277: 17502-10. PMID 11884388 DOI: 10.1074/Jbc.M110867200 |
0.499 |
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