Year |
Citation |
Score |
2024 |
Huang X, Zentella R, Park J, Reser L, Bai DL, Ross MM, Shabanowitz J, Hunt DF, Sun TP. Phosphorylation activates master growth regulator DELLA by promoting histone H2A binding at chromatin in Arabidopsis. Nature Communications. 15: 7694. PMID 39227587 DOI: 10.1038/s41467-024-52033-x |
0.462 |
|
2023 |
Huang X, Zentella R, Park J, Reser L, Bai DL, Ross MM, Shabanowitz J, Hunt DF, Sun TP. Phosphorylation Promotes DELLA Activity by Enhancing Its Binding to Histone H2A at Target Chromatin in . Biorxiv : the Preprint Server For Biology. PMID 37873288 DOI: 10.1101/2023.10.10.561786 |
0.474 |
|
2021 |
Maron MI, Lehman SM, Gayatri S, DeAngelo JD, Hegde S, Lorton BM, Sun Y, Bai DL, Sidoli S, Gupta V, Marunde MR, Bone JR, Sun ZW, Bedford MT, Shabanowitz J, et al. Independent transcriptomic and proteomic regulation by type I and II protein arginine methyltransferases. Iscience. 24: 102971. PMID 34505004 DOI: 10.1016/j.isci.2021.102971 |
0.415 |
|
2021 |
Penny SA, Abelin JG, Malaker SA, Myers PT, Saeed AZ, Steadman LG, Bai DL, Ward ST, Shabanowitz J, Hunt DF, Cobbold M. Tumor Infiltrating Lymphocytes Target HLA-I Phosphopeptides Derived From Cancer Signaling in Colorectal Cancer. Frontiers in Immunology. 12: 723566. PMID 34504498 DOI: 10.3389/fimmu.2021.723566 |
0.384 |
|
2021 |
McCloud RL, Yuan K, Mahoney KE, Bai DL, Shabanowitz J, Ross MM, Hunt DF, Hsu KL. Direct Target Site Identification of a Sulfonyl-Triazole Covalent Kinase Probe by LC-MS Chemical Proteomics. Analytical Chemistry. PMID 34431655 DOI: 10.1021/acs.analchem.1c01591 |
0.505 |
|
2020 |
Srzentić K, Fornelli L, Tsybin YO, Loo JA, Seckler H, Agar JN, Anderson LC, Bai DL, Beck A, Brodbelt JS, van der Burgt YEM, Chamot-Rooke J, Chatterjee S, Chen Y, Clarke DJ, et al. Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 32812765 DOI: 10.1021/Jasms.0C00036 |
0.5 |
|
2020 |
D'Ippolito RA, Panepinto M, Mahoney KE, Bai DL, Shabanowitz J, Hunt DF. Sequencing a bispecific antibody by controlling chain concentration effects when using an immobilized nonspecific protease. Analytical Chemistry. PMID 32597636 DOI: 10.1021/Acs.Analchem.0C01126 |
0.489 |
|
2019 |
Hinkle J, D'Ippolito RA, Panepinto MC, Wang W, Bai DL, Shabanowitz J, Hunt DF. Unambiguous Sequence Characterization of a Monoclonal Antibody in a Single Analysis Using a Nonspecific Immobilized Enzyme Reactor. Analytical Chemistry. PMID 31584792 DOI: 10.1021/Acs.Analchem.9B02666 |
0.524 |
|
2019 |
D'Ippolito RA, Minamino N, Rivera-Casas C, Cheema MS, Bai DL, Kasinsky HE, Shabanowitz J, Eirin-Lopez JM, Ueda T, Hunt DF, Ausió J. Protamines from liverwort are produced by posttranslational cleavage and C-terminal di-aminopropanelation of several male germ-specific H1 histones. The Journal of Biological Chemistry. PMID 31527083 DOI: 10.1074/Jbc.Ra119.010316 |
0.471 |
|
2019 |
Ugrin SA, English AM, Syka JEP, Bai DL, Anderson LC, Shabanowitz J, Hunt DF. Ion-Ion Proton Transfer and Parallel Ion Parking for the Analysis of Mixtures of Intact Proteins on a Modified Orbitrap Mass Analyzer. Journal of the American Society For Mass Spectrometry. PMID 31392699 DOI: 10.1007/S13361-019-02290-8 |
0.53 |
|
2017 |
Malaker SA, Penny SA, Steadman LG, Myers PT, Loke J, Raghavan M, Bai DL, Shabanowitz J, Hunt D, Cobbold M. Identification of glycopeptides as post-translationally modified neoantigens in leukemia. Cancer Immunology Research. PMID 28314751 DOI: 10.1158/2326-6066.Cir-16-0280 |
0.471 |
|
2016 |
Malaker SA, Ferracane MJ, Depontieu FR, Zarling AL, Shabanowitz J, Bai DL, Topalian SL, Engelhard VH, Hunt DF. Identification and Characterization of Complex Glycosylated Peptides Presented by the MHC Class II Processing Pathway in Melanoma. Journal of Proteome Research. PMID 27550523 DOI: 10.1021/Acs.Jproteome.6B00496 |
0.465 |
|
2015 |
Bailey AO, Panchenko T, Shabanowitz J, Lehman SM, Bai DL, Hunt DF, Black BE, Foltz DR. Identification of the posttranslational modifications present in centromeric chromatin. Molecular & Cellular Proteomics : McP. PMID 26685127 DOI: 10.1074/Mcp.M115.053710 |
0.405 |
|
2015 |
Zhang L, English AM, Bai DL, Ugrin SA, Shabanowitz J, Ross MM, Hunt DF, Wang WH. Analysis of Monoclonal Antibody Sequence and Post-translational Modifications by Time-controlled Proteolysis and Tandem Mass Spectrometry. Molecular & Cellular Proteomics : McP. PMID 26621848 DOI: 10.1074/Mcp.O115.056721 |
0.555 |
|
2015 |
Abelin JG, Trantham PD, Penny SA, Patterson AM, Ward ST, Hildebrand WH, Cobbold M, Bai DL, Shabanowitz J, Hunt DF. Complementary IMAC enrichment methods for HLA-associated phosphopeptide identification by mass spectrometry. Nature Protocols. 10: 1308-18. PMID 26247297 DOI: 10.1038/Nprot.2015.086 |
0.487 |
|
2015 |
Anderson LC, English AM, Wang W, Bai DL, Shabanowitz J, Hunt DF. Protein derivatization and sequential ion/ion reactions to enhance sequence coverage produced by electron transfer dissociation mass spectrometry. International Journal of Mass Spectrometry. 377: 617-624. PMID 25844056 DOI: 10.1016/J.Ijms.2014.06.023 |
0.524 |
|
2015 |
Hunt DF, Shabanowitz J, Bai DL. Peptide Sequence Analysis by Electron Transfer Dissociation Mass Spectrometry: A Web-Based Tutorial. Journal of the American Society For Mass Spectrometry. 26: 1256-8. PMID 25821049 DOI: 10.1007/S13361-015-1105-2 |
0.517 |
|
2013 |
Earley L, Anderson LC, Bai DL, Mullen C, Syka JE, English AM, Dunyach JJ, Stafford GC, Shabanowitz J, Hunt DF, Compton PD. Front-end electron transfer dissociation: a new ionization source. Analytical Chemistry. 85: 8385-90. PMID 23909443 DOI: 10.1021/Ac401783F |
0.497 |
|
2013 |
Bailey AO, Panchenko T, Sathyan KM, Petkowski JJ, Pai PJ, Bai DL, Russell DH, Macara IG, Shabanowitz J, Hunt DF, Black BE, Foltz DR. Posttranslational modification of CENP-A influences the conformation of centromeric chromatin. Proceedings of the National Academy of Sciences of the United States of America. 110: 11827-32. PMID 23818633 DOI: 10.1073/Pnas.1300325110 |
0.448 |
|
2012 |
Sridhara V, Bai DL, Chi A, Shabanowitz J, Hunt DF, Bryant SH, Geer LY. Increasing peptide identifications and decreasing search times for ETD spectra by pre-processing and calculation of parent precursor charge. Proteome Science. 10: 8. PMID 22321509 DOI: 10.1186/1477-5956-10-8 |
0.51 |
|
2012 |
Compton PD, Strukl JV, Bai DL, Shabanowitz J, Hunt DF. Optimization of electron transfer dissociation via informed selection of reagents and operating parameters. Analytical Chemistry. 84: 1781-5. PMID 22182179 DOI: 10.1021/Ac202807H |
0.507 |
|
2009 |
Good DM, Wenger CD, McAlister GC, Bai DL, Hunt DF, Coon JJ. Post-acquisition ETD spectral processing for increased peptide identifications. Journal of the American Society For Mass Spectrometry. 20: 1435-40. PMID 19362853 DOI: 10.1016/J.Jasms.2009.03.006 |
0.542 |
|
2007 |
Chi A, Bai DL, Geer LY, Shabanowitz J, Hunt DF. Analysis of intact proteins on a chromatographic time scale by electron transfer dissociation tandem mass spectrometry. International Journal of Mass Spectrometry. 259: 197-203. PMID 17364019 DOI: 10.1016/J.Ijms.2006.09.030 |
0.54 |
|
2007 |
Chi A, Huttenhower C, Geer LY, Coon JJ, Syka JE, Bai DL, Shabanowitz J, Burke DJ, Troyanskaya OG, Hunt DF. Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 104: 2193-8. PMID 17287358 DOI: 10.1073/Pnas.0607084104 |
0.556 |
|
2004 |
Syka JE, Marto JA, Bai DL, Horning S, Senko MW, Schwartz JC, Ueberheide B, Garcia B, Busby S, Muratore T, Shabanowitz J, Hunt DF. Novel linear quadrupole ion trap/FT mass spectrometer: performance characterization and use in the comparative analysis of histone H3 post-translational modifications. Journal of Proteome Research. 3: 621-6. PMID 15253445 DOI: 10.1021/Pr0499794 |
0.543 |
|
2003 |
Seamons A, Sutton J, Bai D, Baird E, Bonn N, Kafsack BF, Shabanowitz J, Hunt DF, Beeson C, Goverman J. Competition between two MHC binding registers in a single peptide processed from myelin basic protein influences tolerance and susceptibility to autoimmunity. The Journal of Experimental Medicine. 197: 1391-7. PMID 12756272 DOI: 10.1084/Jem.20022226 |
0.496 |
|
Show low-probability matches. |