Ian M. Ehrenreich, Ph.D. - Publications

Affiliations: 
North Carolina State University, Raleigh, NC 
Area:
Genomics

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Isdaner AJ, Levis NA, Ehrenreich IM, Pfennig DW. Genetic Variants Underlying Plasticity in Natural Populations of Spadefoot Toads: Environmental Assessment versus Phenotypic Response. Genes. 15. PMID 38790242 DOI: 10.3390/genes15050611  0.353
2022 Matsui T, Mullis MN, Roy KR, Hale JJ, Schell R, Levy SF, Ehrenreich IM. The interplay of additivity, dominance, and epistasis on fitness in a diploid yeast cross. Nature Communications. 13: 1463. PMID 35304450 DOI: 10.1038/s41467-022-29111-z  0.348
2020 Coradini ALV, Hull CB, Ehrenreich IM. Building genomes to understand biology. Nature Communications. 11: 6177. PMID 33268788 DOI: 10.1038/s41467-020-19753-2  0.314
2019 Seidl F, Levis NA, Schell R, Pfennig DW, Pfennig KS, Ehrenreich IM. Genome of , a Rapidly Developing, Phenotypically Plastic, and Desert-Adapted Spadefoot Toad. G3 (Bethesda, Md.). PMID 31578218 DOI: 10.1534/G3.119.400705  0.363
2019 Seidl F, Levis NA, Jones CD, Monroy-Eklund A, Ehrenreich IM, Pfennig KS. Variation in hybrid gene expression: implications for the evolution of genetic incompatibilities in interbreeding species. Molecular Ecology. PMID 31541560 DOI: 10.1111/Mec.15246  0.406
2019 Lee JT, Coradini ALV, Shen A, Ehrenreich IM. Layers of Cryptic Genetic Variation Underlie a Yeast Complex Trait. Genetics. PMID 30787041 DOI: 10.1534/Genetics.119.301907  0.455
2018 Mullis MN, Matsui T, Schell R, Foree R, Ehrenreich IM. The complex underpinnings of genetic background effects. Nature Communications. 9: 3548. PMID 30224702 DOI: 10.1038/S41467-018-06023-5  0.393
2017 Linder RA, Greco JP, Seidl F, Matsui T, Ehrenreich IM. The Stress-Inducible Peroxidase TSA2 Underlies a Conditionally Beneficial Chromosomal Duplication in Saccharomyces cerevisiae. G3 (Bethesda, Md.). PMID 28743806 DOI: 10.1534/G3.117.300069  0.318
2017 Ehrenreich IM. Epistasis: Searching for Interacting Genetic Variants Using Crosses. G3 (Bethesda, Md.). 7: 1619-1622. PMID 28592644 DOI: 10.1534/G3.117.042770  0.39
2017 Ehrenreich IM. Epistasis: Searching for Interacting Genetic Variants Using Crosses. Genetics. 206: 531-535. PMID 28592494 DOI: 10.1534/Genetics.117.203059  0.39
2017 Ehrenreich IM, Magwene PM. Genetic Analysis of Complex Traits in Saccharomyces cerevisiae. Cold Spring Harbor Protocols. 2017: pdb.top077602. PMID 28572210 DOI: 10.1101/Pdb.Top077602  0.49
2017 Ehrenreich IM, Magwene PM. Genetic Dissection of Heritable Traits in Yeast Using Bulk Segregant Analysis. Cold Spring Harbor Protocols. 2017: pdb.prot088989. PMID 28572183 DOI: 10.1101/Pdb.Prot088989  0.455
2017 Matsui T, Lee JT, Ehrenreich IM. Genetic suppression: Extending our knowledge from lab experiments to natural populations. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 28471485 DOI: 10.1002/Bies.201700023  0.441
2016 Schell R, Mullis M, Ehrenreich IM. Modifiers of the Genotype-Phenotype Map: Hsp90 and Beyond. Plos Biology. 14: e2001015. PMID 27832066 DOI: 10.1371/Journal.Pbio.2001015  0.449
2016 Yuan W, Flowers JM, Sahraie DJ, Ehrenreich IM, Purugganan MD. Extreme QTL mapping of germination speed in Arabidopsis thaliana. Molecular Ecology. PMID 27454560 DOI: 10.1111/Mec.13768  0.724
2016 Matsui T, Ehrenreich IM. Gene-Environment Interactions in Stress Response Contribute Additively to a Genotype-Environment Interaction. Plos Genetics. 12: e1006158. PMID 27437938 DOI: 10.1371/Journal.Pgen.1006158  0.369
2016 Taylor MB, Phan J, Lee JT, McCadden M, Ehrenreich IM. Diverse genetic architectures lead to the same cryptic phenotype in a yeast cross. Nature Communications. 7: 11669. PMID 27248513 DOI: 10.1038/Ncomms11669  0.397
2016 Lee JT, Taylor MB, Shen A, Ehrenreich IM. Multi-locus Genotypes Underlying Temperature Sensitivity in a Mutationally Induced Trait. Plos Genetics. 12: e1005929. PMID 26990313 DOI: 10.1371/Journal.Pgen.1005929  0.425
2015 Linder RA, Seidl F, Ha K, Ehrenreich IM. The complex genetic and molecular basis of a model quantitative trait. Molecular Biology of the Cell. PMID 26510497 DOI: 10.1091/Mbc.E15-06-0408  0.445
2015 Taylor MB, Ehrenreich IM. Transcriptional Derepression Uncovers Cryptic Higher-Order Genetic Interactions. Plos Genetics. 11: e1005606. PMID 26484664 DOI: 10.1371/Journal.Pgen.1005606  0.421
2015 Ehrenreich IM, Pfennig DW. Genetic assimilation: a review of its potential proximate causes and evolutionary consequences. Annals of Botany. PMID 26359425 DOI: 10.1093/Aob/Mcv130  0.463
2015 Matsui T, Linder R, Phan J, Seidl F, Ehrenreich IM. Regulatory Rewiring in a Cross Causes Extensive Genetic Heterogeneity. Genetics. 201: 769-77. PMID 26232408 DOI: 10.1534/Genetics.115.180661  0.481
2015 Taylor MB, Ehrenreich IM. Higher-order genetic interactions and their contribution to complex traits. Trends in Genetics : Tig. 31: 34-40. PMID 25284288 DOI: 10.1016/J.Tig.2014.09.001  0.433
2014 Pfennig DW, Ehrenreich IM. Towards a gene regulatory network perspective on phenotypic plasticity, genetic accommodation and genetic assimilation. Molecular Ecology. 23: 4438-40. PMID 25208504 DOI: 10.1111/Mec.12887  0.401
2014 Taylor MB, Ehrenreich IM. Genetic interactions involving five or more genes contribute to a complex trait in yeast. Plos Genetics. 10: e1004324. PMID 24784154 DOI: 10.1371/Journal.Pgen.1004324  0.485
2013 Bloom JS, Ehrenreich IM, Loo WT, Lite TL, Kruglyak L. Finding the sources of missing heritability in a yeast cross. Nature. 494: 234-7. PMID 23376951 DOI: 10.1038/Nature11867  0.468
2012 Jang H, Ehrenreich IM. Genome-wide characterization of genetic variation in the unicellular, green alga Chlamydomonas reinhardtii. Plos One. 7: e41307. PMID 22848460 DOI: 10.1371/Journal.Pone.0041307  0.438
2012 Banta JA, Ehrenreich IM, Gerard S, Chou L, Wilczek A, Schmitt J, Kover PX, Purugganan MD. Climate envelope modelling reveals intraspecific relationships among flowering phenology, niche breadth and potential range size in Arabidopsis thaliana. Ecology Letters. 15: 769-77. PMID 22583905 DOI: 10.1111/J.1461-0248.2012.01796.X  0.747
2012 Ehrenreich IM, Bloom J, Torabi N, Wang X, Jia Y, Kruglyak L. Genetic architecture of highly complex chemical resistance traits across four yeast strains. Plos Genetics. 8: e1002570. PMID 22438822 DOI: 10.1371/Journal.Pgen.1002570  0.446
2010 Ehrenreich IM, Torabi N, Jia Y, Kent J, Martis S, Shapiro JA, Gresham D, Caudy AA, Kruglyak L. Dissection of genetically complex traits with extremely large pools of yeast segregants. Nature. 464: 1039-42. PMID 20393561 DOI: 10.1038/Nature08923  0.441
2009 Ehrenreich IM, Gerke JP, Kruglyak L. Genetic dissection of complex traits in yeast: insights from studies of gene expression and other phenotypes in the BYxRM cross. Cold Spring Harbor Symposia On Quantitative Biology. 74: 145-53. PMID 19734204 DOI: 10.1101/Sqb.2009.74.013  0.466
2009 Kover PX, Valdar W, Trakalo J, Scarcelli N, Ehrenreich IM, Purugganan MD, Durrant C, Mott R. A Multiparent Advanced Generation Inter-Cross to fine-map quantitative traits in Arabidopsis thaliana. Plos Genetics. 5: e1000551. PMID 19593375 DOI: 10.1371/Journal.Pgen.1000551  0.615
2009 Ehrenreich IM, Hanzawa Y, Chou L, Roe JL, Kover PX, Purugganan MD. Candidate gene association mapping of Arabidopsis flowering time. Genetics. 183: 325-35. PMID 19581446 DOI: 10.1534/Genetics.109.105189  0.746
2009 Webb EA, Ehrenreich IM, Brown SL, Valois FW, Waterbury JB. Phenotypic and genotypic characterization of multiple strains of the diazotrophic cyanobacterium, Crocosphaera watsonii, isolated from the open ocean. Environmental Microbiology. 11: 338-48. PMID 19196268 DOI: 10.1111/J.1462-2920.2008.01771.X  0.33
2009 Caicedo AL, Richards C, Ehrenreich IM, Purugganan MD. Complex rearrangements lead to novel chimeric gene fusion polymorphisms at the Arabidopsis thaliana MAF2-5 flowering time gene cluster. Molecular Biology and Evolution. 26: 699-711. PMID 19139056 DOI: 10.1093/Molbev/Msn300  0.731
2009 Richards CL, Hanzawa Y, Katari MS, Ehrenreich IM, Engelmann KE, Purugganan MD. Perspectives on Ecological and Evolutionary Systems Biology Annual Plant Reviews. 35: 331-349. DOI: 10.1002/9781444312249.ch12  0.55
2008 Ehrenreich IM, Purugganan M. MicroRNAs in plants: Possible contributions to phenotypic diversity. Plant Signaling & Behavior. 3: 829-30. PMID 19704512 DOI: 10.4161/Psb.3.10.5914  0.533
2008 Ehrenreich IM, Purugganan MD. Sequence variation of MicroRNAs and their binding sites in Arabidopsis. Plant Physiology. 146: 1974-82. PMID 18305205 DOI: 10.1104/Pp.108.116582  0.512
2007 Ehrenreich IM, Stafford PA, Purugganan MD. The genetic architecture of shoot branching in Arabidopsis thaliana: a comparative assessment of candidate gene associations vs. quantitative trait locus mapping. Genetics. 176: 1223-36. PMID 17435248 DOI: 10.1534/Genetics.107.071928  0.641
2006 Ehrenreich IM, Purugganan MD. The molecular genetic basis of plant adaptation. American Journal of Botany. 93: 953-62. PMID 21642159 DOI: 10.3732/Ajb.93.7.953  0.667
2005 Ehrenreich IM, Waterbury JB, Webb EA. Distribution and diversity of natural product genes in marine and freshwater cyanobacterial cultures and genomes. Applied and Environmental Microbiology. 71: 7401-13. PMID 16269782 DOI: 10.1128/Aem.71.11.7401-7413.2005  0.347
Show low-probability matches.