| Year |
Citation |
Score |
| 2024 |
Wang B, Mount SM. Latent Dirichlet allocation mixture models for nucleotide sequence analysis. Nar Genomics and Bioinformatics. 6: lqae099. PMID 39131816 DOI: 10.1093/nargab/lqae099 |
0.411 |
|
| 2022 |
Rahmatpour N, Kuo LY, Kang J, Herman E, Lei L, Li M, Srinivasan S, Zipper R, Wolniak SM, Delwiche CF, Mount S, Li FW. Analyses of Marsilea vestita genome and transcriptomes do not support widespread intron retention during spermatogenesis. The New Phytologist. PMID 36451524 DOI: 10.1111/nph.18652 |
0.39 |
|
| 2021 |
Sretenovic S, Yin D, Levav A, Selengut JD, Mount SM, Qi Y. Expanding plant genome-editing scope by an engineered iSpyMacCas9 system that targets A-rich PAM sequences. Plant Communications. 2: 100101. PMID 33898973 DOI: 10.1016/j.xplc.2020.100101 |
0.312 |
|
| 2021 |
Zhang Y, Ren Q, Tang X, Liu S, Malzahn AA, Zhou J, Wang J, Yin D, Pan C, Yuan M, Huang L, Yang H, Zhao Y, Fang Q, Zheng X, ... ... Mount SM, et al. Expanding the scope of plant genome engineering with Cas12a orthologs and highly multiplexable editing systems. Nature Communications. 12: 1944. PMID 33782402 DOI: 10.1038/s41467-021-22330-w |
0.307 |
|
| 2019 |
Gunady MK, Mount SM, Corrada Bravo H. Yanagi: Fast and interpretable segment-based alternative splicing and gene expression analysis. Bmc Bioinformatics. 20: 421. PMID 31409274 DOI: 10.1186/S12859-019-2947-6 |
0.423 |
|
| 2019 |
Mount SM, Avsec Ž, Carmel L, Casadio R, Çelik MH, Chen K, Cheng J, Cohen NE, Fairbrother WG, Fenesh T, Gagneur J, Gotea V, Holzer T, Lin CF, Martelli PL, et al. Assessing predictions of the impact of variants on splicing in CAGI5. Human Mutation. PMID 31301154 DOI: 10.1002/Humu.23869 |
0.405 |
|
| 2017 |
Zhang XN, Shi Y, Powers JJ, Gowda NB, Zhang C, Ibrahim HMM, Ball HB, Chen SL, Lu H, Mount SM. Transcriptome analyses reveal SR45 to be a neutral splicing regulator and a suppressor of innate immunity in Arabidopsis thaliana. Bmc Genomics. 18: 772. PMID 29020934 DOI: 10.1186/s12864-017-4183-7 |
0.372 |
|
| 2016 |
Buffalo V, Mount SM, Coop G. A Genealogical Look at Shared Ancestry on the X Chromosome. Genetics. PMID 27356612 DOI: 10.1534/Genetics.116.190041 |
0.314 |
|
| 2015 |
Mount SM, Wolin SL. Recognizing the 35th anniversary of the proposal that snRNPs are involved in splicing. Molecular Biology of the Cell. 26: 3557-60. PMID 26463979 DOI: 10.1091/Mbc.E14-10-1486 |
0.356 |
|
| 2015 |
Gibbons TR, Mount SM, Cooper ED, Delwiche CF. Erratum to: Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm. Bmc Bioinformatics. 16: 274. PMID 26315999 DOI: 10.1186/S12859-015-0690-1 |
0.329 |
|
| 2015 |
Pal LR, Yu CH, Mount SM, Moult J. Insights from GWAS: emerging landscape of mechanisms underlying complex trait disease. Bmc Genomics. 16: S4. PMID 26110739 DOI: 10.1186/1471-2164-16-S8-S4 |
0.333 |
|
| 2014 |
Patro R, Mount SM, Kingsford C. Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms. Nature Biotechnology. 32: 462-4. PMID 24752080 DOI: 10.1038/Nbt.2862 |
0.389 |
|
| 2010 |
Lin CF, Mount SM, Jarmo?owski A, Maka?owski W. Evolutionary dynamics of U12-type spliceosomal introns. Bmc Evolutionary Biology. 10: 47. PMID 20163699 DOI: 10.1186/1471-2148-10-47 |
0.331 |
|
| 2009 |
Zhang XN, Mount SM. Two alternatively spliced isoforms of the Arabidopsis SR45 protein have distinct roles during normal plant development. Plant Physiology. 150: 1450-8. PMID 19403727 DOI: 10.1104/pp.109.138180 |
0.32 |
|
| 2008 |
Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KL, Salzberg SL, Feng L, Jones MR, Skelton RL, Murray JE, ... ... Mount SM, et al. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature. 452: 991-6. PMID 18432245 DOI: 10.1038/Nature06856 |
0.536 |
|
| 2007 |
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Mount SM, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341 |
0.712 |
|
| 2007 |
Dogan RI, Getoor L, Wilbur WJ, Mount SM. Features generated for computational splice-site prediction correspond to functional elements. Bmc Bioinformatics. 8: 410. PMID 17958908 DOI: 10.1186/1471-2105-8-410 |
0.336 |
|
| 2007 |
Pertea M, Mount SM, Salzberg SL. A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana. Bmc Bioinformatics. 8: 159. PMID 17517127 DOI: 10.1186/1471-2105-8-159 |
0.357 |
|
| 2007 |
Mount SM, Gotea V, Lin CF, Hernandez K, Makalowski W. Spliceosomal small nuclear RNA genes in 11 insect genomes. Rna (New York, N.Y.). 13: 5-14. PMID 17095541 DOI: 10.1261/rna.259207 |
0.585 |
|
| 2006 |
Campbell MA, Haas BJ, Hamilton JP, Mount SM, Buell CR. Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis. Bmc Genomics. 7: 327. PMID 17194304 DOI: 10.1186/1471-2164-7-327 |
0.495 |
|
| 2004 |
Roberts M, Hayes W, Hunt BR, Mount SM, Yorke JA. Reducing storage requirements for biological sequence comparison. Bioinformatics (Oxford, England). 20: 3363-9. PMID 15256412 DOI: 10.1093/Bioinformatics/Bth408 |
0.412 |
|
| 2003 |
Haas BJ, Delcher AL, Mount SM, Wortman JR, Smith RK, Hannick LI, Maiti R, Ronning CM, Rusch DB, Town CD, Salzberg SL, White O. Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. Nucleic Acids Research. 31: 5654-66. PMID 14500829 DOI: 10.1093/Nar/Gkg770 |
0.541 |
|
| 2003 |
Nagengast AA, Stitzinger SM, Tseng CH, Mount SM, Salz HK. Sex-lethal splicing autoregulation in vivo: interactions between SEX-LETHAL, the U1 snRNP and U2AF underlie male exon skipping. Development (Cambridge, England). 130: 463-71. PMID 12490553 DOI: 10.1242/dev.00274 |
0.333 |
|
| 2002 |
Mount SM, Chang C. Evidence for a plastid origin of plant ethylene receptor genes. Plant Physiology. 130: 10-4. PMID 12226482 DOI: 10.1104/Pp.005397 |
0.363 |
|
| 2000 |
Mount SM. Genomic sequence, splicing, and gene annotation. American Journal of Human Genetics. 67: 788-92. PMID 10986039 DOI: 10.1086/303098 |
0.466 |
|
| 2000 |
Mount SM, Salz HK. Pre-messenger RNA processing factors in the Drosophila genome. The Journal of Cell Biology. 150: F37-44. PMID 10908584 DOI: 10.1083/Jcb.150.2.F37 |
0.411 |
|
| 2000 |
Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, Richards S, Ashburner M, Henderson SN, ... ... Mount SM, et al. The genome sequence of Drosophila melanogaster. Science (New York, N.Y.). 287: 2185-95. PMID 10731132 DOI: 10.1126/Science.287.5461.2185 |
0.623 |
|
| 2000 |
Mount SM, Anderson P. Expanding the definition of informational suppression. Trends in Genetics : Tig. 16: 157. PMID 10729829 DOI: 10.1016/S0168-9525(99)01964-2 |
0.378 |
|
| 1999 |
Woodson SA, Mount SM. The RNA World, second edition, edited by Raymond F. Gesteland, Thomas R. Cech, and John F. Atkins. 1999. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press. Hardcover, 709 pp. $129. Rna. 5: 1133-1134. DOI: 10.1017/S1355838299001259 |
0.332 |
|
| 1997 |
Mount SM. Genetic depletion reveals an essential role for an SR protein splicing factor in vertebrate cells. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 19: 189-92. PMID 9080768 DOI: 10.1002/bies.950190302 |
0.351 |
|
| 1996 |
Peculis BA, Mount SM. Ribosomal RNA: small nucleolar RNAs make their mark. Current Biology : Cb. 6: 1413-5. PMID 8939586 DOI: 10.1016/S0960-9822(96)00745-2 |
0.344 |
|
| 1996 |
Mount SM. AT-AC introns: an ATtACk on dogma. Science (New York, N.Y.). 271: 1690-2. PMID 8596928 DOI: 10.1126/science.271.5256.1690 |
0.339 |
|
| 1995 |
Peng X, Mount SM. Genetic enhancement of RNA-processing defects by a dominant mutation in B52, the Drosophila gene for an SR protein splicing factor. Molecular and Cellular Biology. 15: 6273-82. PMID 7565780 DOI: 10.1128/Mcb.15.11.6273 |
0.381 |
|
| 1995 |
Guo M, Mount SM. Localization of sequences required for size-specific splicing of a small Drosophila intron in vitro. Journal of Molecular Biology. 253: 426-37. PMID 7473725 DOI: 10.1006/jmbi.1995.0564 |
0.444 |
|
| 1993 |
Guo M, Lo PC, Mount SM. Species-specific signals for the splicing of a short Drosophila intron in vitro. Molecular and Cellular Biology. 13: 1104-18. PMID 8423778 DOI: 10.1128/Mcb.13.2.1104 |
0.448 |
|
| 1992 |
Mount SM, Burks C, Hertz G, Stormo GD, White O, Fields C. Splicing signals in Drosophila: intron size, information content, and consensus sequences. Nucleic Acids Research. 20: 4255-62. PMID 1508718 DOI: 10.1093/nar/20.16.4255 |
0.428 |
|
| 1991 |
Kurkulos M, Weinberg JM, Pepling ME, Mount SM. Polyadenylylation in copia requires unusually distant upstream sequences. Proceedings of the National Academy of Sciences of the United States of America. 88: 3038-42. PMID 1849643 DOI: 10.1073/Pnas.88.8.3038 |
0.463 |
|
| 1990 |
Lo PC, Mount SM. Drosophila melanogaster genes for U1 snRNA variants and their expression during development. Nucleic Acids Research. 18: 6971-9. PMID 2124674 DOI: 10.1093/Nar/18.23.6971 |
0.486 |
|
| 1990 |
Pepling M, Mount SM. Sequence of a cDNA from the Drosophila melanogaster white gene. Nucleic Acids Research. 18: 1633. PMID 2109311 DOI: 10.1093/Nar/18.6.1633 |
0.47 |
|
| 1990 |
Mancebo R, Lo PC, Mount SM. Structure and expression of the Drosophila melanogaster gene for the U1 small nuclear ribonucleoprotein particle 70K protein. Molecular and Cellular Biology. 10: 2492-502. PMID 1692955 DOI: 10.1128/Mcb.10.6.2492 |
0.464 |
|
| 1988 |
Mount SM, Green MM, Rubin GM. Partial revertants of the transposable element-associated suppressible allele white-apricot in Drosophila melanogaster: structures and responsiveness to genetic modifiers. Genetics. 118: 221-34. PMID 2834265 |
0.446 |
|
| 1987 |
Mount SM. Sequence similarity. Nature. 325: 487. PMID 3100960 DOI: 10.1038/325487c0 |
0.36 |
|
| 1985 |
Mount SM, Rubin GM. Complete nucleotide sequence of the Drosophila transposable element copia: homology between copia and retroviral proteins. Molecular and Cellular Biology. 5: 1630-8. PMID 2410772 DOI: 10.1128/Mcb.5.7.1630 |
0.614 |
|
| 1983 |
Mount S, Steitz J. RNA processing: Lessons from mutant globins Nature. 303: 380-381. PMID 6855891 DOI: 10.1038/303380A0 |
0.323 |
|
| 1983 |
Mount SM. RNA processing. Sequences that signal where to splice. Nature. 304: 309-10. PMID 6348551 DOI: 10.1038/304309A0 |
0.433 |
|
| 1983 |
Steitz JA, Wolin SL, Rinke J, Pettersson I, Mount SM, Lerner EA, Hinterberger M, Gottlieb E. Small ribonucleoproteins from eukaryotes: structures and roles in RNA biogenesis. Cold Spring Harbor Symposia On Quantitative Biology. 47: 893-900. PMID 6222869 DOI: 10.1101/Sqb.1983.047.01.103 |
0.331 |
|
| 1983 |
Padgett RA, Mount SM, Steitz JA, Sharp PA. Splicing of messenger RNA precursors is inhibited by antisera to small nuclear ribonucleoprotein. Cell. 35: 101-7. PMID 6194895 DOI: 10.1016/0092-8674(83)90212-X |
0.321 |
|
| 1983 |
Mount SM, Pettersson I, Hinterberger M, Karmas A, Steitz JA. The U1 small nuclear RNA-protein complex selectively binds a 5' splice site in vitro. Cell. 33: 509-18. PMID 6190573 DOI: 10.1016/0092-8674(83)90432-4 |
0.399 |
|
| 1983 |
Bernstein LB, Mount SM, Weiner AM. Pseudogenes for human small nuclear RNA U3 appear to arise by integration of self-primed reverse transcripts of the RNA into new chromosomal sites. Cell. 32: 461-72. PMID 6186397 DOI: 10.1016/0092-8674(83)90466-X |
0.386 |
|
| 1982 |
Mount SM. A catalogue of splice junction sequences. Nucleic Acids Research. 10: 459-72. PMID 7063411 DOI: 10.1093/Nar/10.2.459 |
0.494 |
|
| 1981 |
Mount SM, Steitz JA. Sequence of U1 RNA from Drosophila melanogaster: implications for U1 secondary structure and possible involvement in splicing. Nucleic Acids Research. 9: 6351-68. PMID 6172778 DOI: 10.1093/Nar/9.23.6351 |
0.494 |
|
| 1981 |
Dingermann T, Sharp S, Appel B, DeFranco D, Mount S, Heiermann R, Pongs O, Söll D. Transcription of cloned tRNA and 5s RNA genes in a Drosophila cell free extract Nucleic Acids Research. 9: 3907-3918. PMID 6170932 DOI: 10.1093/Nar/9.16.3907 |
0.379 |
|
| 1980 |
Lerner MR, Boyle JA, Mount SM, Wolin SL, Steitz JA. Are snRNPs involved in splicing? Nature. 283: 220-4. PMID 7350545 DOI: 10.1038/283220A0 |
0.352 |
|
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