Omar E. Cornejo, PhD - Publications

Affiliations: 
Genetics Stanford University, Palo Alto, CA 
Area:
population genetics and evolutionary biology

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Miller EL, Evans BA, Cornejo OE, Roberts IS, Rozen DE. Pherotype Polymorphism in Streptococcus pneumoniae Has No Obvious Effects on Population Structure and Recombination. Genome Biology and Evolution. 9: 2546-2559. PMID 28992304 DOI: 10.1093/gbe/evx188  0.32
2016 Chaurio RA, Pacheco MA, Cornejo OE, Durrego E, Stanley CE, Castillo AI, Herrera S, Escalante AA. Evolution of the Transmission-Blocking Vaccine Candidates Pvs28 and Pvs25 in Plasmodium vivax: Geographic Differentiation and Evidence of Positive Selection. Plos Neglected Tropical Diseases. 10: e0004786. PMID 27347876 DOI: 10.1371/journal.pntd.0004786  1
2016 Cooke TF, Yee MC, Muzzio M, Sockell A, Bell R, Cornejo OE, Kelley JL, Bailliet G, Bravi CM, Bustamante CD, Kenny EE. GBStools: A Statistical Method for Estimating Allelic Dropout in Reduced Representation Sequencing Data. Plos Genetics. 12: e1005631. PMID 26828719 DOI: 10.1371/journal.pgen.1005631  1
2015 Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, Homburger JR, Wall J, ... Cornejo OE, et al. Genomic evidence for the Pleistocene and recent population history of Native Americans. Science (New York, N.Y.). PMID 26198033 DOI: 10.1126/science.aab3884  1
2015 Cornejo OE, Fisher D, Escalante AA. Genome-wide patterns of genetic polymorphism and signatures of selection in Plasmodium vivax. Genome Biology and Evolution. 7: 106-19. PMID 25523904 DOI: 10.1093/gbe/evu267  1
2014 Raghavan M, DeGiorgio M, Albrechtsen A, Moltke I, Skoglund P, Korneliussen TS, Grønnow B, Appelt M, Gulløv HC, Friesen TM, Fitzhugh W, Malmström H, Rasmussen S, Olsen J, Melchior L, ... ... Cornejo OE, et al. The genetic prehistory of the New World Arctic. Science (New York, N.Y.). 345: 1255832. PMID 25170159 DOI: 10.1126/science.1255832  1
2014 Rasmussen M, Anzick SL, Waters MR, Skoglund P, DeGiorgio M, Stafford TW, Rasmussen S, Moltke I, Albrechtsen A, Doyle SM, Poznik GD, Gudmundsdottir V, Yadav R, Malaspinas AS, White SS, ... ... Cornejo OE, et al. The genome of a Late Pleistocene human from a Clovis burial site in western Montana. Nature. 506: 225-9. PMID 24522598 DOI: 10.1038/nature13025  1
2013 Pepperell CS, Casto AM, Kitchen A, Granka JM, Cornejo OE, Holmes EC, Holmes EC, Birren B, Galagan J, Feldman MW. The role of selection in shaping diversity of natural M. tuberculosis populations. Plos Pathogens. 9: e1003543. PMID 23966858 DOI: 10.1371/journal.ppat.1003543  1
2013 Utro F, Haiminen N, Livingstone D, Cornejo OE, Royaert S, Schnell RJ, Motamayor JC, Kuhn DN, Parida L. iXora: exact haplotype inferencing and trait association. Bmc Genetics. 14: 48. PMID 23742238 DOI: 10.1186/1471-2156-14-48  1
2013 Motamayor JC, Mockaitis K, Schmutz J, Haiminen N, Livingstone D, Cornejo O, Findley SD, Zheng P, Utro F, Royaert S, Saski C, Jenkins J, Podicheti R, Zhao M, Scheffler BE, et al. The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color. Genome Biology. 14: r53. PMID 23731509 DOI: 10.1186/gb-2013-14-6-r53  1
2013 Cornejo OE, Lefébure T, Bitar PD, Lang P, Richards VP, Eilertson K, Do T, Beighton D, Zeng L, Ahn SJ, Burne RA, Siepel A, Bustamante CD, Stanhope MJ. Evolutionary and population genomics of the cavity causing bacteria Streptococcus mutans. Molecular Biology and Evolution. 30: 881-93. PMID 23228887 DOI: 10.1093/molbev/mss278  1
2012 Utro F, Cornejo OE, Livingstone D, Motamayor JC, Parida L. ARG-based genome-wide analysis of cacao cultivars. Bmc Bioinformatics. 13: S17. PMID 23281769 DOI: 10.1186/1471-2105-13-S19-S17  1
2011 Pacheco MA, Battistuzzi FU, Junge RE, Cornejo OE, Williams CV, Landau I, Rabetafika L, Snounou G, Jones-Engel L, Escalante AA. Timing the origin of human malarias: the lemur puzzle. Bmc Evolutionary Biology. 11: 299. PMID 21992100 DOI: 10.1186/1471-2148-11-299  1
2010 Krief S, Escalante AA, Pacheco MA, Mugisha L, André C, Halbwax M, Fischer A, Krief JM, Kasenene JM, Crandfield M, Cornejo OE, Chavatte JM, Lin C, Letourneur F, Grüner AC, et al. On the diversity of malaria parasites in African apes and the origin of Plasmodium falciparum from Bonobos. Plos Pathogens. 6: e1000765. PMID 20169187 DOI: 10.1371/journal.ppat.1000765  1
2010 Cornejo OE, McGee L, Rozen DE. Polymorphic competence peptides do not restrict recombination in Streptococcus pneumoniae. Molecular Biology and Evolution. 27: 694-702. PMID 19942613 DOI: 10.1093/molbev/msp287  1
2009 Levin BR, Cornejo OE. The population and evolutionary dynamics of homologous gene recombination in bacterial populations. Plos Genetics. 5: e1000601. PMID 19680442 DOI: 10.1371/journal.pgen.1000601  1
2009 Leung SW, Apponi LH, Cornejo OE, Kitchen CM, Valentini SR, Pavlath GK, Dunham CM, Corbett AH. Splice variants of the human ZC3H14 gene generate multiple isoforms of a zinc finger polyadenosine RNA binding protein. Gene. 439: 71-8. PMID 19303045 DOI: 10.1016/j.gene.2009.02.022  1
2009 Cornejo OE, Rozen DE, May RM, Levin BR. Oscillations in continuous culture populations of Streptococcus pneumoniae: population dynamics and the evolution of clonal suicide. Proceedings. Biological Sciences / the Royal Society. 276: 999-1008. PMID 19129121 DOI: 10.1098/rspb.2008.1415  1
2006 Cornejo OE, Escalante AA. The origin and age of Plasmodium vivax. Trends in Parasitology. 22: 558-63. PMID 17035086 DOI: 10.1016/j.pt.2006.09.007  1
2005 Escalante AA, Cornejo OE, Freeland DE, Poe AC, Durrego E, Collins WE, Lal AA. A monkey's tale: the origin of Plasmodium vivax as a human malaria parasite. Proceedings of the National Academy of Sciences of the United States of America. 102: 1980-5. PMID 15684081 DOI: 10.1073/pnas.0409652102  1
2004 Escalante AA, Cornejo OE, Rojas A, Udhayakumar V, Lal AA. Assessing the effect of natural selection in malaria parasites. Trends in Parasitology. 20: 388-95. PMID 15246323 DOI: 10.1016/j.pt.2004.06.002  1
2000 Sebastiani M, Aponte C, Andara C, Cornejo O, Esclasans D, Márquez E, Moscarella R, Ponte A, Vizcaíno D. Impact asessment approach in land use ordering. Case of study: Imataca Forestal Reserve in Venezuela | El enfoque de las evaluaciones de impacto ambiental en el ordenamiento territorial. Caso: Reserva Forestal Imataca, Venezuela Revista Geografica Venezolana. 41: 187-213.  1
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