| Year |
Citation |
Score |
| 2024 |
Schiksnis EC, Nicastro IA, Pasquinelli AE. Full-length direct RNA sequencing reveals extensive remodeling of RNA expression, processing and modification in aging . Biorxiv : the Preprint Server For Biology. PMID 38948813 DOI: 10.1101/2024.06.18.599640 |
0.33 |
|
| 2023 |
Chipman LB, Luc S, Nicastro IA, Hulahan JJ, Dann DC, Bodas DM, Pasquinelli AE. Expression, not sequence, distinguishes miR-238 from its miR-239ab sister miRNAs in promoting longevity in Caenorhabditis elegans. Plos Genetics. 19: e1011055. PMID 38011256 DOI: 10.1371/journal.pgen.1011055 |
0.337 |
|
| 2022 |
Elder CR, Pasquinelli AE. New Roles for MicroRNAs in Old Worms. Frontiers in Aging. 3: 871226. PMID 35821862 DOI: 10.3389/fragi.2022.871226 |
0.532 |
|
| 2022 |
Nicholson-Shaw AL, Kofman ER, Yeo GW, Pasquinelli AE. Nuclear and cytoplasmic poly(A) binding proteins (PABPs) favor distinct transcripts and isoforms. Nucleic Acids Research. 50: 4685-4702. PMID 35438785 DOI: 10.1093/nar/gkac263 |
0.376 |
|
| 2021 |
Pagliuso DC, Bodas DM, Pasquinelli AE. Recovery from heat shock requires the microRNA pathway in Caenorhabditis elegans. Plos Genetics. 17: e1009734. PMID 34351906 DOI: 10.1371/journal.pgen.1009734 |
0.4 |
|
| 2019 |
Garrigues JM, Tsu BV, Daugherty MD, Pasquinelli AE. Diversification of the heat shock response by Helitron transposable elements. Elife. 8. PMID 31825311 DOI: 10.7554/Elife.51139 |
0.323 |
|
| 2019 |
Winkenbach LP, Doser R, Reed KJ, Pasquinelli AE, Phillips CM, Claycomb JM. Todos Santos small RNA symposium. Rna Biology. 1-5. PMID 31397621 DOI: 10.1080/15476286.2019.1649586 |
0.346 |
|
| 2019 |
Schreiner WP, Pagliuso DC, Garrigues JM, Chen JS, Aalto AP, Pasquinelli AE. Remodeling of the Caenorhabditis elegans non-coding RNA transcriptome by heat shock. Nucleic Acids Research. PMID 31396626 DOI: 10.1093/Nar/Gkz693 |
0.451 |
|
| 2019 |
De-Souza EA, Camara H, Salgueiro WG, Moro RP, Knittel TL, Tonon G, Pinto S, Pinca APF, Antebi A, Pasquinelli AE, Massirer KB, Mori MA. RNA interference may result in unexpected phenotypes in Caenorhabditis elegans. Nucleic Acids Research. PMID 30838421 DOI: 10.1093/Nar/Gkz154 |
0.738 |
|
| 2019 |
Chipman LB, Pasquinelli AE. miRNA Targeting: Growing beyond the Seed. Trends in Genetics : Tig. PMID 30638669 DOI: 10.1016/J.Tig.2018.12.005 |
0.649 |
|
| 2018 |
Nicholson AL, Pasquinelli AE. Tales of Detailed Poly(A) Tails. Trends in Cell Biology. PMID 30503240 DOI: 10.1016/J.Tcb.2018.11.002 |
0.388 |
|
| 2018 |
Broughton JP, Pasquinelli AE. Detection of microRNA-Target Interactions by Chimera PCR (ChimP). Methods in Molecular Biology (Clifton, N.J.). 1823: 153-165. PMID 29959680 DOI: 10.1007/978-1-4939-8624-8_12 |
0.66 |
|
| 2018 |
Aalto AP, Nicastro IA, Broughton JP, Chipman LB, Schreiner WP, Chen JS, Pasquinelli AE. Opposing roles of microRNA Argonautes during Caenorhabditis elegans aging. Plos Genetics. 14: e1007379. PMID 29927939 DOI: 10.1371/Journal.Pgen.1007379 |
0.629 |
|
| 2018 |
Pasquinelli AE. A rADAR defense against RNAi. Genes & Development. 32: 199-201. PMID 29491134 DOI: 10.1101/Gad.313049.118 |
0.471 |
|
| 2017 |
Lima SA, Chipman LB, Nicholson AL, Chen YH, Yee BA, Yeo GW, Coller J, Pasquinelli AE. Short poly(A) tails are a conserved feature of highly expressed genes. Nature Structural & Molecular Biology. PMID 29106412 DOI: 10.1038/Nsmb.3499 |
0.45 |
|
| 2016 |
Pasquinelli AE. A sense-able microRNA. Genes & Development. 30: 2019-2020. PMID 27798846 DOI: 10.1101/Gad.290023.116 |
0.587 |
|
| 2016 |
Broughton JP, Lovci MT, Huang JL, Yeo GW, Pasquinelli AE. Pairing beyond the Seed Supports MicroRNA Targeting Specificity. Molecular Cell. PMID 27720646 DOI: 10.1016/J.Molcel.2016.09.004 |
0.609 |
|
| 2016 |
Broughton JP, Pasquinelli AE. A tale of two sequences: microRNA-target chimeric reads. Genetics, Selection, Evolution : Gse. 48: 31. PMID 27044644 DOI: 10.1186/S12711-016-0209-X |
0.634 |
|
| 2015 |
Mondol V, Ahn BC, Pasquinelli AE. Splicing remodels the let-7 primary microRNA to facilitate Drosha processing in Caenorhabditis elegans. Rna (New York, N.Y.). 21: 1396-403. PMID 26081559 DOI: 10.1261/Rna.052118.115 |
0.684 |
|
| 2015 |
Pasquinelli AE. MicroRNAs: heralds of the noncoding RNA revolution. Rna (New York, N.Y.). 21: 709-10. PMID 25780202 DOI: 10.1261/Rna.049981.115 |
0.716 |
|
| 2014 |
Van Wynsberghe PM, Pasquinelli AE. Period homolog LIN-42 regulates miRNA transcription to impact developmental timing. Worm. 3: e974453. PMID 26435883 DOI: 10.4161/21624054.2014.974453 |
0.604 |
|
| 2014 |
Lima SA, Pasquinelli AE. Identification of miRNAs and their targets in C. elegans. Advances in Experimental Medicine and Biology. 825: 431-50. PMID 25201113 DOI: 10.1007/978-1-4939-1221-6_12 |
0.68 |
|
| 2014 |
Van Wynsberghe PM, Finnegan EF, Stark T, Angelus EP, Homan KE, Yeo GW, Pasquinelli AE. The Period protein homolog LIN-42 negatively regulates microRNA biogenesis in C. elegans. Developmental Biology. 390: 126-35. PMID 24699545 DOI: 10.1016/J.Ydbio.2014.03.017 |
0.676 |
|
| 2013 |
Massirer KB, Pasquinelli AE. MicroRNAs that interfere with RNAi. Worm. 2: e21835. PMID 24058860 DOI: 10.4161/worm.21835 |
0.814 |
|
| 2013 |
Pasquinelli AE. The primary target of let-7 microRNA. Biochemical Society Transactions. 41: 821-4. PMID 23863138 DOI: 10.1042/Bst20130020 |
0.686 |
|
| 2013 |
Broughton JP, Pasquinelli AE. Identifying Argonaute binding sites in Caenorhabditis elegans using iCLIP. Methods (San Diego, Calif.). 63: 119-25. PMID 23583680 DOI: 10.1016/J.Ymeth.2013.03.033 |
0.616 |
|
| 2013 |
Hunter SE, Finnegan EF, Zisoulis DG, Lovci MT, Melnik-Martinez KV, Yeo GW, Pasquinelli AE. Functional genomic analysis of the let-7 regulatory network in Caenorhabditis elegans. Plos Genetics. 9: e1003353. PMID 23516374 DOI: 10.1371/Journal.Pgen.1003353 |
0.771 |
|
| 2013 |
Kai ZS, Finnegan EF, Huang S, Pasquinelli AE. Multiple cis-elements and trans-acting factors regulate dynamic spatio-temporal transcription of let-7 in Caenorhabditis elegans. Developmental Biology. 374: 223-33. PMID 23201578 DOI: 10.1016/J.Ydbio.2012.11.021 |
0.705 |
|
| 2013 |
Finnegan EF, Pasquinelli AE. MicroRNA biogenesis: regulating the regulators. Critical Reviews in Biochemistry and Molecular Biology. 48: 51-68. PMID 23163351 DOI: 10.3109/10409238.2012.738643 |
0.694 |
|
| 2012 |
Pasquinelli AE. Birthing histone mRNAs by CSR-1 section. The Embo Journal. 31: 3790-1. PMID 22960639 DOI: 10.1038/Emboj.2012.254 |
0.327 |
|
| 2012 |
Zisoulis DG, Kai ZS, Chang RK, Pasquinelli AE. Autoregulation of microRNA biogenesis by let-7 and Argonaute. Nature. 486: 541-4. PMID 22722835 DOI: 10.1038/Nature11134 |
0.811 |
|
| 2012 |
Aalto AP, Pasquinelli AE. Small non-coding RNAs mount a silent revolution in gene expression. Current Opinion in Cell Biology. 24: 333-40. PMID 22464106 DOI: 10.1016/J.Ceb.2012.03.006 |
0.437 |
|
| 2012 |
Massirer KB, Perez SG, Mondol V, Pasquinelli AE. The miR-35-41 family of microRNAs regulates RNAi sensitivity in Caenorhabditis elegans. Plos Genetics. 8: e1002536. PMID 22412382 DOI: 10.1371/Journal.Pgen.1002536 |
0.788 |
|
| 2012 |
Pasquinelli AE. MicroRNAs and their targets: recognition, regulation and an emerging reciprocal relationship. Nature Reviews. Genetics. 13: 271-82. PMID 22411466 DOI: 10.1038/Nrg3162 |
0.692 |
|
| 2012 |
Mondol V, Pasquinelli AE. Let's make it happen: the role of let-7 microRNA in development. Current Topics in Developmental Biology. 99: 1-30. PMID 22365733 DOI: 10.1016/B978-0-12-387038-4.00001-X |
0.593 |
|
| 2012 |
Pasquinelli AE. A team effort blocks the ribosome in its tracks. Nature Structural & Molecular Biology. 19: 133-4. PMID 22301874 DOI: 10.1038/Nsmb.2236 |
0.343 |
|
| 2011 |
Van Wynsberghe PM, Chan SP, Slack FJ, Pasquinelli AE. Analysis of microRNA Expression and Function Methods in Cell Biology. 106: 219-252. PMID 22118279 DOI: 10.1016/B978-0-12-544172-8.00008-6 |
0.682 |
|
| 2011 |
Zisoulis DG, Yeo GW, Pasquinelli AE. Comprehensive identification of miRNA target sites in live animals. Methods in Molecular Biology (Clifton, N.J.). 732: 169-85. PMID 21431713 DOI: 10.1007/978-1-61779-083-6_13 |
0.673 |
|
| 2011 |
Van Wynsberghe PM, Kai ZS, Massirer KB, Burton VH, Yeo GW, Pasquinelli AE. LIN-28 co-transcriptionally binds primary let-7 to regulate miRNA maturation in Caenorhabditis elegans. Nature Structural & Molecular Biology. 18: 302-8. PMID 21297634 DOI: 10.1038/Nsmb.1986 |
0.816 |
|
| 2010 |
Bracht JR, Van Wynsberghe PM, Mondol V, Pasquinelli AE. Regulation of lin-4 miRNA expression, organismal growth and development by a conserved RNA binding protein in C. elegans Developmental Biology. 348: 210-221. PMID 20937268 DOI: 10.1016/J.Ydbio.2010.10.003 |
0.842 |
|
| 2010 |
Pasquinelli AE. Molecular biology. Paring miRNAs through pairing. Science (New York, N.Y.). 328: 1494-5. PMID 20558697 DOI: 10.1126/Science.1191531 |
0.651 |
|
| 2010 |
Godshalk SE, Melnik-Martinez KV, Pasquinelli AE, Slack FJ. MicroRNAs and cancer: a meeting summary of the eponymous Keystone Conference. Epigenetics. 5: 164-8. PMID 20168081 DOI: 10.4161/Epi.5.2.11162 |
0.64 |
|
| 2010 |
Zisoulis DG, Lovci MT, Wilbert ML, Hutt KR, Liang TY, Pasquinelli AE, Yeo GW. Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans. Nature Structural & Molecular Biology. 17: 173-9. PMID 20062054 DOI: 10.1038/Nsmb.1745 |
0.639 |
|
| 2010 |
Kai Z, Pasquinelli AE. A genome wide view of hunchback-like-1 targets. Cell Cycle (Georgetown, Tex.). 9: 230-1. PMID 20061795 DOI: 10.4161/Cc.9.2.10608 |
0.568 |
|
| 2010 |
Kai ZS, Pasquinelli AE. MicroRNA assassins: factors that regulate the disappearance of miRNAs. Nature Structural & Molecular Biology. 17: 5-10. PMID 20051982 DOI: 10.1038/Nsmb.1762 |
0.785 |
|
| 2010 |
Hinton A, Afrikanova I, Wilson M, King CC, Maurer B, Yeo GW, Hayek A, Pasquinelli AE. A distinct microRNA signature for definitive endoderm derived from human embryonic stem cells. Stem Cells and Development. 19: 797-807. PMID 19807270 DOI: 10.1089/Scd.2009.0224 |
0.602 |
|
| 2009 |
Holtz J, Pasquinelli AE. Uncoupling of lin-14 mRNA and protein repression by nutrient deprivation in Caenorhabditis elegans. Rna (New York, N.Y.). 15: 400-5. PMID 19155321 DOI: 10.1261/Rna.1258309 |
0.66 |
|
| 2009 |
Pasquinelli A. S01-02 Regulation of gene expression by MicroRNAs in Caenorhabitis elegans Mechanisms of Development. 126. DOI: 10.1016/J.Mod.2009.06.1069 |
0.493 |
|
| 2007 |
Norden-Krichmar TM, Holtz J, Pasquinelli AE, Gaasterland T. Computational prediction and experimental validation of Ciona intestinalis microRNA genes. Bmc Genomics. 8: 445. PMID 18047675 DOI: 10.1186/1471-2164-8-445 |
0.583 |
|
| 2007 |
Chendrimada TP, Finn KJ, Ji X, Baillat D, Gregory RI, Liebhaber SA, Pasquinelli AE, Shiekhattar R. MicroRNA silencing through RISC recruitment of eIF6. Nature. 447: 823-8. PMID 17507929 DOI: 10.1038/Nature05841 |
0.687 |
|
| 2006 |
Pasquinelli AE. Demystifying small RNA pathways. Developmental Cell. 10: 419-24. PMID 16625708 DOI: 10.1016/J.Devcel.2006.03.005 |
0.448 |
|
| 2006 |
Massirer KB, Pasquinelli AE. The evolving role of microRNAs in animal gene expression. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 28: 449-52. PMID 16615087 DOI: 10.1002/Bies.20406 |
0.819 |
|
| 2006 |
Bagga S, Pasquinelli AE. Identification and analysis of microRNAs. Genetic Engineering. 27: 1-20. PMID 16382868 DOI: 10.1007/0-387-25856-6_1 |
0.479 |
|
| 2005 |
Lancman JJ, Caruccio NC, Harfe BD, Pasquinelli AE, Schageman JJ, Pertsemlidis A, Fallon JF. Analysis of the regulation of lin-41 during chick and mouse limb development. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 234: 948-60. PMID 16245339 DOI: 10.1002/Dvdy.20591 |
0.616 |
|
| 2005 |
Bagga S, Bracht J, Hunter S, Massirer K, Holtz J, Eachus R, Pasquinelli AE. Regulation by let-7 and lin-4 miRNAs results in target mRNA degradation. Cell. 122: 553-63. PMID 16122423 DOI: 10.1016/J.Cell.2005.07.031 |
0.79 |
|
| 2005 |
Pasquinelli AE, Hunter S, Bracht J. MicroRNAs: a developing story. Current Opinion in Genetics & Development. 15: 200-5. PMID 15797203 DOI: 10.1016/J.Gde.2005.01.002 |
0.797 |
|
| 2005 |
Kim JK, Gabel HW, Kamath RS, Tewari M, Pasquinelli A, Rual JF, Kennedy S, Dybbs M, Bertin N, Kaplan JM, Vidal M, Ruvkun G. Functional genomic analysis of RNA interference in C. elegans. Science (New York, N.Y.). 308: 1164-7. PMID 15790806 DOI: 10.1126/Science.1109267 |
0.466 |
|
| 2005 |
Pasquinelli AE. MicroRNAs: A small contribution from worms Rna Interference Technology: From Basic Science to Drug Development. 69-83. DOI: 10.1017/CBO9780511546402.007 |
0.533 |
|
| 2004 |
Mansfield JH, Harfe BD, Nissen R, Obenauer J, Srineel J, Chaudhuri A, Farzan-Kashani R, Zuker M, Pasquinelli AE, Ruvkun G, Sharp PA, Tabin CJ, McManus MT. MicroRNA-responsive 'sensor' transgenes uncover Hox-like and other developmentally regulated patterns of vertebrate microRNA expression. Nature Genetics. 36: 1079-83. PMID 15361871 DOI: 10.1038/Ng1421 |
0.627 |
|
| 2004 |
Bracht J, Hunter S, Eachus R, Weeks P, Pasquinelli AE. Trans-splicing and polyadenylation of let-7 microRNA primary transcripts. Rna (New York, N.Y.). 10: 1586-94. PMID 15337850 DOI: 10.1261/Rna.7122604 |
0.836 |
|
| 2003 |
Pasquinelli AE, McCoy A, Jiménez E, Saló E, Ruvkun G, Martindale MQ, Baguñà J. Expression of the 22 nucleotide let-7 heterochronic RNA throughout the Metazoa: a role in life history evolution? Evolution & Development. 5: 372-8. PMID 12823453 DOI: 10.1046/J.1525-142X.2003.03044.X |
0.416 |
|
| 2003 |
Bashirullah A, Pasquinelli AE, Kiger AA, Perrimon N, Ruvkun G, Thummel CS. Coordinate regulation of small temporal RNAs at the onset of Drosophila metamorphosis. Developmental Biology. 259: 1-8. PMID 12812783 DOI: 10.1016/S0012-1606(03)00063-0 |
0.457 |
|
| 2003 |
Lin SY, Johnson SM, Abraham M, Vella MC, Pasquinelli A, Gamberi C, Gottlieb E, Slack FJ. The C elegans hunchback homolog, hbl-1, controls temporal patterning and is a probable microRNA target. Developmental Cell. 4: 639-50. PMID 12737800 DOI: 10.1016/S1534-5807(03)00124-2 |
0.522 |
|
| 2002 |
Pasquinelli AE, Ruvkun G. Control of developmental timing by micrornas and their targets. Annual Review of Cell and Developmental Biology. 18: 495-513. PMID 12142272 DOI: 10.1146/Annurev.Cellbio.18.012502.105832 |
0.524 |
|
| 2002 |
Pasquinelli AE. MicroRNAs: deviants no longer. Trends in Genetics : Tig. 18: 171-3. PMID 11932009 DOI: 10.1016/S0168-9525(01)02624-5 |
0.569 |
|
| 2001 |
Grishok A, Pasquinelli AE, Conte D, Li N, Parrish S, Ha I, Baillie DL, Fire A, Ruvkun G, Mello CC. Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing. Cell. 106: 23-34. PMID 11461699 DOI: 10.1016/S0092-8674(01)00431-7 |
0.523 |
|
| 2001 |
Hutvágner G, McLachlan J, Pasquinelli AE, Bálint E, Tuschl T, Zamore PD. A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA. Science (New York, N.Y.). 293: 834-8. PMID 11452083 DOI: 10.1126/Science.1062961 |
0.477 |
|
| 2000 |
Pasquinelli AE, Reinhart BJ, Slack F, Martindale MQ, Kuroda MI, Maller B, Hayward DC, Ball EE, Degnan B, Müller P, Spring J, Srinivasan A, Fishman M, Finnerty J, Corbo J, et al. Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA. Nature. 408: 86-9. PMID 11081512 DOI: 10.1038/35040556 |
0.48 |
|
| 2000 |
Reinhart BJ, Slack FJ, Basson M, Pasquinelli AE, Bettinger JC, Rougvie AE, Horvitz HR, Ruvkun G. The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans. Nature. 403: 901-6. PMID 10706289 DOI: 10.1038/35002607 |
0.51 |
|
| 1997 |
Pasquinelli AE, Powers MA, Lund E, Forbes D, Dahlberg JE. Inhibition of mRNA export in vertebrate cells by nuclear export signal conjugates. Proceedings of the National Academy of Sciences of the United States of America. 94: 14394-9. PMID 9405623 DOI: 10.1073/Pnas.94.26.14394 |
0.628 |
|
| 1997 |
Pasquinelli AE, Ernst RK, Lund E, Grimm C, Zapp ML, Rekosh D, Hammarskjöld ML, Dahlberg JE. The constitutive transport element (CTE) of Mason-Pfizer monkey virus (MPMV) accesses a cellular mRNA export pathway. The Embo Journal. 16: 7500-10. PMID 9405378 DOI: 10.1093/Emboj/16.24.7500 |
0.63 |
|
| 1995 |
Pasquinelli AE, Dahlberg JE, Lund E. Reverse 5' caps in RNAs made in vitro by phage RNA polymerases. Rna (New York, N.Y.). 1: 957-67. PMID 8548660 |
0.57 |
|
| 1994 |
Greenspan DS, Pasquinelli AE. BstUI and DpnLL RFLPS at the col5a1 gene Human Molecular Genetics. 3: 385. PMID 7911701 DOI: 10.1093/Hmg/3.2.385-A |
0.313 |
|
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