| Year |
Citation |
Score |
| 2023 |
Ramayo-Caldas Y, Crespo-Piazuelo D, Morata J, González-Rodríguez O, Sebastià C, Castello A, Dalmau A, Ramos-Onsins S, Alexiou KG, Folch JM, Quintanilla R, Ballester M. Copy Number Variation on Loci Affects the Diversity and Composition of the Fecal Microbiota in Pigs. Microbiology Spectrum. e0527122. PMID 37255458 DOI: 10.1128/spectrum.05271-22 |
0.315 |
|
| 2023 |
Bazakos C, Alexiou KG, Ramos-Onsins S, Koubouris G, Tourvas N, Xanthopoulou A, Mellidou I, Moysiadis T, Vourlaki IT, Metzidakis I, Sergentani C, Manolikaki I, Michailidis M, Pistikoudi A, Polidoros A, et al. Whole genome scanning of a Mediterranean basin hotspot collection provides new insights into olive tree biodiversity and biology. The Plant Journal : For Cell and Molecular Biology. PMID 37164361 DOI: 10.1111/tpj.16270 |
0.332 |
|
| 2020 |
Rodríguez-Valera Y, Rocha D, Naves M, Renand G, Pérez-Pineda E, Ramayo-Caldas Y, Ramos-Onsins SE. The Identification of Runs of Homozygosity Gives a Focus on the Genetic Diversity and Adaptation of the "Charolais de Cuba" Cattle. Animals : An Open Access Journal From Mdpi. 10. PMID 33261195 DOI: 10.3390/ani10122233 |
0.369 |
|
| 2018 |
Ferretti L, Ribeca P, Ramos-Onsins SE. The Site Frequency/Dosage Spectrum of Autopolyploid Populations. Frontiers in Genetics. 9: 480. PMID 30405691 DOI: 10.3389/fgene.2018.00480 |
0.347 |
|
| 2018 |
Rodriguez-Valera Y, Renand G, Naves M, Fonseca-Jiménez Y, Moreno-Probance TI, Ramos-Onsins S, Rocha D, Ramayo-Caldas Y. Genetic diversity and selection signatures of the beef 'Charolais de Cuba' breed. Scientific Reports. 8: 11005. PMID 30030481 DOI: 10.1038/s41598-018-29453-z |
0.306 |
|
| 2018 |
Rodriguez-Valera Y, Renand G, Naves M, Fonseca-Jiménez Y, Moreno-Probance TI, Ramos-Onsins S, Rocha D, Ramayo-Caldas Y. Genetic diversity and selection signatures of the beef 'Charolais de Cuba' breed. Scientific Reports. 8: 11005. PMID 30030481 DOI: 10.1038/s41598-018-29453-z |
0.306 |
|
| 2018 |
Ferretti L, Klassmann A, Raineri E, Ramos-Onsins SE, Wiehe T, Achaz G. The neutral frequency spectrum of linked sites. Theoretical Population Biology. PMID 29964061 DOI: 10.1016/J.Tpb.2018.06.001 |
0.653 |
|
| 2018 |
Morata J, Tormo M, Alexiou KG, Vives C, Ramos-Onsins SE, Garcia-Mas J, Casacuberta JM. The Evolutionary Consequences of Transposon-Related Pericentromer Expansion in Melon. Genome Biology and Evolution. 10: 1584-1595. PMID 29901717 DOI: 10.1093/gbe/evy115 |
0.304 |
|
| 2018 |
Guirao-Rico S, Ramirez O, Ojeda A, Amills M, Ramos-Onsins SE. Porcine Y-chromosome variation is consistent with the occurrence of paternal gene flow from non-Asian to Asian populations. Heredity. 120: 63-76. PMID 29234173 DOI: 10.1038/S41437-017-0002-9 |
0.762 |
|
| 2017 |
Rozas J, Ferrer-Mata A, Sánchez-DelBarrio JC, Guirao-Rico S, Librado P, Ramos-Onsins SE, Sánchez-Gracia A. DnaSP 6: DNA Sequence Polymorphism Analysis of Large Datasets. Molecular Biology and Evolution. PMID 29029172 DOI: 10.1093/Molbev/Msx248 |
0.725 |
|
| 2017 |
Ferretti L, Ledda A, Wiehe T, Achaz G, Ramos-Onsins SE. Decomposing the Site Frequency Spectrum: The Impact of Tree Topology on Neutrality Tests. Genetics. PMID 28679545 DOI: 10.1534/Genetics.116.188763 |
0.642 |
|
| 2016 |
Montemuiño C, Espinosa A, Moure JC, Vera G, Hernández P, Ramos-Onsins S. Approaching Long Genomic Regions and Large Recombination Rates with msParSm as an Alternative to MaCS. Evolutionary Bioinformatics Online. 12: 223-228. PMID 27721650 DOI: 10.4137/Ebo.S40268 |
0.332 |
|
| 2016 |
Clop A, Sharaf A, Castelló A, Ramos-Onsins S, Cirera S, Mercadé A, Derdak S, Beltran S, Huisman A, Fredholm M, van As P, Sánchez A. Identification of protein-damaging mutations in 10 swine taste receptors and 191 appetite-reward genes. Bmc Genomics. 17: 685. PMID 27566279 DOI: 10.1186/S12864-016-2972-Z |
0.641 |
|
| 2015 |
Sanseverino W, Hénaff E, Vives C, Pinosio S, Burgos-Paz W, Morgante M, Ramos-Onsins SE, Garcia-Mas J, Casacuberta JM. Transposon Insertions, Structural Variations, and SNPs Contribute to the Evolution of the Melon Genome. Molecular Biology and Evolution. 32: 2760-74. PMID 26174143 DOI: 10.1093/Molbev/Msv152 |
0.39 |
|
| 2015 |
Bianco E, Nevado B, Ramos-Onsins SE, Pérez-Enciso M. A deep catalog of autosomal single nucleotide variation in the pig. Plos One. 10: e0118867. PMID 25789620 DOI: 10.1371/journal.pone.0118867 |
0.385 |
|
| 2014 |
Ramos-Onsins SE, Burgos-Paz W, Manunza A, Amills M. Mining the pig genome to investigate the domestication process Heredity. 113: 471-484. PMID 25074569 DOI: 10.1038/hdy.2014.68 |
0.312 |
|
| 2014 |
Nevado B, Ramos-Onsins SE, Perez-Enciso M. Resequencing studies of nonmodel organisms using closely related reference genomes: Optimal experimental designs and bioinformatics approaches for population genomics Molecular Ecology. 23: 1764-1779. PMID 24795998 DOI: 10.1111/mec.12693 |
0.314 |
|
| 2014 |
Pfeifer B, Wittelsbürger U, Ramos-Onsins SE, Lercher MJ. PopGenome: an efficient Swiss army knife for population genomic analyses in R. Molecular Biology and Evolution. 31: 1929-36. PMID 24739305 DOI: 10.1093/molbev/msu136 |
0.345 |
|
| 2013 |
Ferretti L, Ramos-Onsins SE, Pérez-Enciso M. Population genomics from pool sequencing. Molecular Ecology. 22: 5561-76. PMID 24102736 DOI: 10.1111/mec.12522 |
0.399 |
|
| 2013 |
Segura J, Ferretti L, Ramos-Onsins S, Capilla L, Farré M, Reis F, Oliver-Bonet M, Fernández-Bellón H, Garcia F, Garcia-Caldés M, Robinson TJ, Ruiz-Herrera A. Evolution of recombination in eutherian mammals: insights into mechanisms that affect recombination rates and crossover interference. Proceedings. Biological Sciences / the Royal Society. 280: 20131945. PMID 24068360 DOI: 10.1098/Rspb.2013.1945 |
0.452 |
|
| 2013 |
Burgos-Paz W, Souza CA, Castelló A, Mercadé A, Okumura N, Sheremet'eva IN, Huang LS, Cho IC, Paiva SR, Ramos-Onsins S, Pérez-Enciso M. Worldwide genetic relationships of pigs as inferred from X chromosome SNPs. Animal Genetics. 44: 130-8. PMID 22590984 DOI: 10.1111/J.1365-2052.2012.02374.X |
0.465 |
|
| 2011 |
Amaral AJ, Ferretti L, Megens HJ, Crooijmans RP, Nie H, Ramos-Onsins SE, Perez-Enciso M, Schook LB, Groenen MA. Genome-wide footprints of pig domestication and selection revealed through massive parallel sequencing of pooled DNA. Plos One. 6: e14782. PMID 21483733 DOI: 10.1371/Journal.Pone.0014782 |
0.317 |
|
| 2011 |
Ojeda A, Ramos-Onsins SE, Marletta D, Huang LS, Folch JM, Pérez-Enciso M. Evolutionary study of a potential selection target region in the pig. Heredity. 106: 330-8. PMID 20502482 DOI: 10.1038/hdy.2010.61 |
0.378 |
|
| 2010 |
Heidel AJ, Ramos-Onsins SE, Wang WK, Chiang TY, Mitchell-Olds T. Population history in Arabidopsis halleri using multilocus analysis. Molecular Ecology. 19: 3364-79. PMID 20670364 DOI: 10.1111/J.1365-294X.2010.04761.X |
0.628 |
|
| 2010 |
He F, Chen WH, Collins S, Acquisti C, Goebel U, Ramos-Onsins S, Lercher MJ, de Meaux J. Assessing the influence of adjacent gene orientation on the evolution of gene upstream regions in Arabidopsis thaliana. Genetics. 185: 695-701. PMID 20233855 DOI: 10.1534/Genetics.110.114629 |
0.459 |
|
| 2009 |
Song BH, Windsor AJ, Schmid KJ, Ramos-Onsins S, Schranz ME, Heidel AJ, Mitchell-Olds T. Multilocus patterns of nucleotide diversity, population structure and linkage disequilibrium in Boechera stricta, a wild relative of Arabidopsis. Genetics. 181: 1021-33. PMID 19104077 DOI: 10.1534/Genetics.108.095364 |
0.791 |
|
| 2008 |
Ramírez-Soriano A, Ramos-Onsins SE, Rozas J, Calafell F, Navarro A. Statistical power analysis of neutrality tests under demographic expansions, contractions and bottlenecks with recombination. Genetics. 179: 555-67. PMID 18493071 DOI: 10.1534/Genetics.107.083006 |
0.714 |
|
| 2008 |
Ramos-Onsins SE, Puerma E, Balañá-Alcaide D, Salguero D, Aguadé M. Multilocus analysis of variation using a large empirical data set: phenylpropanoid pathway genes in Arabidopsis thaliana. Molecular Ecology. 17: 1211-23. PMID 18221273 DOI: 10.1111/J.1365-294X.2007.03633.X |
0.79 |
|
| 2007 |
Ramos-Onsins SE, Mitchell-Olds T. Mlcoalsim: multilocus coalescent simulations. Evolutionary Bioinformatics Online. 3: 41-4. PMID 19430603 DOI: 10.4137/Ebo.S0 |
0.596 |
|
| 2007 |
Ramos-Onsins SE, Mousset S, Mitchell-Olds T, Stephan W. Population genetic inference using a fixed number of segregating sites: a reassessment. Genetical Research. 89: 231-44. PMID 18208629 DOI: 10.1017/S0016672307008877 |
0.546 |
|
| 2006 |
Balañá-Alcaide D, Ramos-Onsins SE, Boone Q, Aguadé M. Highly structured nucleotide variation within and among Arabidopsis lyrata populations at the FAH1 and DFR gene regions. Molecular Ecology. 15: 2059-68. PMID 16780424 DOI: 10.1111/j.1365-294X.2006.02918.x |
0.765 |
|
| 2006 |
Quesada H, Ramos-Onsins SE, Rozas J, Aguadé M. Positive selection versus demography: evolutionary inferences based on an unusual haplotype structure in Drosophila simulans. Molecular Biology and Evolution. 23: 1643-7. PMID 16757657 DOI: 10.1093/Molbev/Msl031 |
0.77 |
|
| 2005 |
Quesada H, Ramos-Onsins SE, Aguadé M. Birth-and-death evolution of the Cecropin multigene family in Drosophila. Journal of Molecular Evolution. 60: 1-11. PMID 15696364 DOI: 10.1007/s00239-004-0053-4 |
0.774 |
|
| 2005 |
Schmid KJ, Ramos-Onsins S, Ringys-Beckstein H, Weisshaar B, Mitchell-Olds T. A multilocus sequence survey in Arabidopsis thaliana reveals a genome-wide departure from a neutral model of DNA sequence polymorphism. Genetics. 169: 1601-15. PMID 15654111 DOI: 10.1534/Genetics.104.033795 |
0.762 |
|
| 2004 |
Ramos-Onsins SE, Stranger BE, Mitchell-Olds T, Aguadé M. Multilocus analysis of variation and speciation in the closely related species Arabidopsis halleri and A. lyrata. Genetics. 166: 373-88. PMID 15020431 DOI: 10.1534/Genetics.166.1.373 |
0.77 |
|
| 2002 |
Ramos-Onsins SE, Rozas J. Statistical properties of new neutrality tests against population growth. Molecular Biology and Evolution. 19: 2092-100. PMID 12446801 DOI: 10.1093/Oxfordjournals.Molbev.A004034 |
0.687 |
|
| 2002 |
Kuittinen H, Aguadé M, Charlesworth D, Haan ADE, Lauga B, Mitchell-Olds T, Oikarinen S, Ramos-Onsins S, Stranger B, Van Tienderen P, Savolainen O. Primers for 22 candidate genes for ecological adaptations in Brassicaceae Molecular Ecology Notes. 2: 258-262. DOI: 10.1046/J.1471-8286.2002.00210.X |
0.727 |
|
| 2000 |
Zhao Z, Jin L, Fu YX, Ramsay M, Jenkins T, Leskinen E, Pamilo P, Trexler M, Patthy L, Jorde LB, Ramos-Onsins S, Yu N, Li WH. Worldwide DNA sequence variation in a 10-kilobase noncoding region on human chromosome 22 Proceedings of the National Academy of Sciences of the United States of America. 97: 11354-11358. PMID 11005839 DOI: 10.1073/Pnas.200348197 |
0.454 |
|
| 1998 |
Ramos-Onsins S, Aguadé M. Molecular evolution of the Cecropin multigene family in Drosophila. functional genes vs. pseudogenes. Genetics. 150: 157-71. PMID 9725836 |
0.752 |
|
| 1998 |
Ramos-Onsins S, Segarra C, Rozas J, Aguadé M. Molecular and chromosomal phylogeny in the obscura group of Drosophila inferred from sequences of the rp49 gene region. Molecular Phylogenetics and Evolution. 9: 33-41. PMID 9479691 DOI: 10.1006/Mpev.1997.0438 |
0.779 |
|
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