| Year |
Citation |
Score |
| 2024 |
Zhou Z, Tran PQ, Cowley ES, Trembath-Reichert E, Anantharaman K. Diversity and ecology of microbial sulfur metabolism. Nature Reviews. Microbiology. PMID 39420098 DOI: 10.1038/s41579-024-01104-3 |
0.364 |
|
| 2024 |
Anantharaman K, Martin C, Gitter A. Protein Set Transformer: A protein-based genome language model to power high diversity viromics. Research Square. PMID 39399683 DOI: 10.21203/rs.3.rs-4844047/v1 |
0.317 |
|
| 2024 |
Kosmopoulos JC, Klier KM, Langwig MV, Tran PQ, Anantharaman K. Viromes vs. mixed community metagenomes: choice of method dictates interpretation of viral community ecology. Microbiome. 12: 195. PMID 39375774 DOI: 10.1186/s40168-024-01905-x |
0.316 |
|
| 2024 |
Oliver T, Varghese N, Roux S, Schulz F, Huntemann M, Clum A, Foster B, Foster B, Riley R, LaButti K, Egan R, Hajek P, Mukherjee S, Ovchinnikova G, Reddy TBK, ... ... Anantharaman K, et al. Coassembly and binning of a twenty-year metagenomic time-series from Lake Mendota. Scientific Data. 11: 966. PMID 39231974 DOI: 10.1038/s41597-024-03826-8 |
0.391 |
|
| 2024 |
Klier KM, Martin C, Langwig MV, Anantharaman K. Evolutionary history and origins of Dsr-mediated sulfur oxidation. The Isme Journal. PMID 39206688 DOI: 10.1093/ismejo/wrae167 |
0.332 |
|
| 2024 |
Martin C, Gitter A, Anantharaman K. Protein Set Transformer: A protein-based genome language model to power high diversity viromics. Biorxiv : the Preprint Server For Biology. PMID 39131363 DOI: 10.1101/2024.07.26.605391 |
0.317 |
|
| 2024 |
Huang X, Wang J, Dumack K, Anantharaman K, Ma B, He Y, Liu W, Di H, Li Y, Xu J. Temperature-dependent trophic associations modulate soil bacterial communities along latitudinal gradients. The Isme Journal. PMID 39113591 DOI: 10.1093/ismejo/wrae145 |
0.313 |
|
| 2024 |
Dieppa-Colón E, Martin C, Anantharaman K. Prophage-DB: A comprehensive database to explore diversity, distribution, and ecology of prophages. Biorxiv : the Preprint Server For Biology. PMID 39071402 DOI: 10.1101/2024.07.11.603044 |
0.415 |
|
| 2024 |
George NA, Zhou Z, Anantharaman K, Hug LA. Discarded diversity: Novel megaphages, auxiliary metabolic genes, and virally encoded CRISPR-Cas systems in landfills. Biorxiv : the Preprint Server For Biology. PMID 38854013 DOI: 10.1101/2024.05.30.596742 |
0.381 |
|
| 2024 |
Chitboonthavisuk C, Martin C, Huss P, Peters JM, Anantharaman K, Raman S. Systematic genome-wide discovery of host factors governing bacteriophage infectivity. Biorxiv : the Preprint Server For Biology. PMID 38659955 DOI: 10.1101/2024.04.20.590424 |
0.32 |
|
| 2024 |
Lan F, Saba J, Ross TD, Zhou Z, Krauska K, Anantharaman K, Landick R, Venturelli OS. Massively parallel single-cell sequencing of diverse microbial populations. Nature Methods. PMID 38233503 DOI: 10.1038/s41592-023-02157-7 |
0.578 |
|
| 2023 |
Zhou Z, Martin C, Kosmopoulos JC, Anantharaman K. ViWrap: A modular pipeline to identify, bin, classify, and predict viral-host relationships for viruses from metagenomes. Imeta. 2. PMID 38152703 DOI: 10.1002/imt2.118 |
0.641 |
|
| 2023 |
Liu Y, Cheng YY, Zhou Z, Vivas EI, Warren MF, Rey FE, Anantharaman K, Venturelli OS. Shaping human gut community assembly and butyrate production by controlling the arginine dihydrolase pathway. Biorxiv : the Preprint Server For Biology. PMID 37986770 DOI: 10.1101/2023.01.10.523442 |
0.586 |
|
| 2023 |
Kosmopoulos JC, Klier KM, Langwig MV, Tran PQ, Anantharaman K. Viromes vs. mixed community metagenomes: choice of method dictates interpretation of viral community ecology. Biorxiv : the Preprint Server For Biology. PMID 37904928 DOI: 10.1101/2023.10.15.562385 |
0.794 |
|
| 2023 |
Zhou K, Wong TY, Long L, Anantharaman K, Zhang W, Wong WC, Zhang R, Qian PY. Genomic and transcriptomic insights into complex virus-prokaryote interactions in marine biofilms. The Isme Journal. PMID 37875603 DOI: 10.1038/s41396-023-01546-2 |
0.352 |
|
| 2023 |
Diao M, Dyksma S, Koeksoy E, Ngugi DK, Anantharaman K, Loy A, Pester M. Global diversity and inferred ecophysiology of microorganisms with the potential for dissimilatory sulfate/sulfite reduction. Fems Microbiology Reviews. 47. PMID 37796897 DOI: 10.1093/femsre/fuad058 |
0.4 |
|
| 2023 |
Rahlff J, Wietz M, Giebel HA, Bayfield O, Nilsson E, Bergström K, Kieft K, Anantharaman K, Ribas-Ribas M, Schweitzer HD, Wurl O, Hoetzinger M, Antson A, Holmfeldt K. Ecogenomics and cultivation reveal distinctive viral-bacterial communities in the surface microlayer of a Baltic Sea slick. Isme Communications. 3: 97. PMID 37723220 DOI: 10.1038/s43705-023-00307-8 |
0.804 |
|
| 2023 |
Salamzade R, Tran P, Martin C, Manson AL, Gilmore MS, Earl AM, Anantharaman K, Kalan LR. zol & fai: large-scale targeted detection and evolutionary investigation of gene clusters. Biorxiv : the Preprint Server For Biology. PMID 37333121 DOI: 10.1101/2023.06.07.544063 |
0.747 |
|
| 2023 |
Tran PQ, Bachand SC, Hotvedt JC, Kieft K, McDaniel EA, McMahon KD, Anantharaman K. Physiological and genomic evidence of cysteine degradation and aerobic hydrogen sulfide production in freshwater bacteria. Msystems. e0020123. PMID 37285121 DOI: 10.1128/msystems.00201-23 |
0.799 |
|
| 2023 |
Mangalea MR, Keift K, Duerkop BA, Anantharaman K. Assembly and Annotation of Viral Metagenomes from Short-Read Sequencing Data. Methods in Molecular Biology (Clifton, N.J.). 2649: 317-337. PMID 37258871 DOI: 10.1007/978-1-0716-3072-3_17 |
0.36 |
|
| 2023 |
Zhou Z, Tran PQ, Adams AM, Kieft K, Breier JA, Fortunato CS, Sheik CS, Huber JA, Li M, Dick GJ, Anantharaman K. Sulfur cycling connects microbiomes and biogeochemistry in deep-sea hydrothermal plumes. The Isme Journal. PMID 37179442 DOI: 10.1038/s41396-023-01421-0 |
0.793 |
|
| 2023 |
Kuppa Baskaran DK, Umale S, Zhou Z, Raman K, Anantharaman K. Metagenome-based metabolic modelling predicts unique microbial interactions in deep-sea hydrothermal plume microbiomes. Isme Communications. 3: 42. PMID 37120693 DOI: 10.1038/s43705-023-00242-8 |
0.631 |
|
| 2023 |
Huss P, Kieft K, Meger A, Nishikawa K, Anantharaman K, Raman S. Deep metagenomic mining reveals bacteriophage sequence motifs driving host specificity. Biorxiv : the Preprint Server For Biology. PMID 36798209 DOI: 10.1101/2023.02.07.527309 |
0.763 |
|
| 2023 |
Zhou Z, Martin C, Kosmopoulos JC, Anantharaman K. ViWrap: A modular pipeline to identify, bin, classify, and predict viral-host relationships for viruses from metagenomes. Biorxiv : the Preprint Server For Biology. PMID 36778280 DOI: 10.1101/2023.01.30.526317 |
0.641 |
|
| 2023 |
Cheng YY, Zhou Z, Papadopoulos JM, Zuke JD, Falbel TG, Anantharaman K, Burton BM, Venturelli OS. Efficient plasmid transfer via natural competence in a microbial co-culture. Molecular Systems Biology. e11406. PMID 36714980 DOI: 10.15252/msb.202211406 |
0.524 |
|
| 2022 |
Zhou Z, Liu Y, Anantharaman K, Li M. The expanding Asgard archaea invoke novel insights into Tree of Life and eukaryogenesis. Mlife. 1: 374-381. PMID 38818484 DOI: 10.1002/mlf2.12048 |
0.314 |
|
| 2022 |
Zhou Z, St John E, Anantharaman K, Reysenbach AL. Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits. Microbiome. 10: 241. PMID 36572924 DOI: 10.1186/s40168-022-01424-7 |
0.651 |
|
| 2022 |
Chelluboina B, Kieft K, Breister A, Anantharaman K, Vemuganti R. Gut virome dysbiosis following focal cerebral ischemia in mice. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 271678X221107702. PMID 35702025 DOI: 10.1177/0271678X221107702 |
0.755 |
|
| 2022 |
Kieft K, Adams A, Salamzade R, Kalan L, Anantharaman K. vRhyme enables binning of viral genomes from metagenomes. Nucleic Acids Research. PMID 35544285 DOI: 10.1093/nar/gkac341 |
0.808 |
|
| 2022 |
Kieft K, Anantharaman K. Deciphering Active Prophages from Metagenomes. Msystems. e0008422. PMID 35323045 DOI: 10.1128/msystems.00084-22 |
0.796 |
|
| 2022 |
Zhou Z, Tran PQ, Breister AM, Liu Y, Kieft K, Cowley ES, Karaoz U, Anantharaman K. METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks. Microbiome. 10: 33. PMID 35172890 DOI: 10.1186/s40168-021-01213-8 |
0.813 |
|
| 2022 |
Kieft K, Anantharaman K. Virus genomics: what is being overlooked? Current Opinion in Virology. 53: 101200. PMID 35051682 DOI: 10.1016/j.coviro.2022.101200 |
0.796 |
|
| 2022 |
Feng J, Qian Y, Zhou Z, Ertmer S, Vivas EI, Lan F, Hamilton JJ, Rey FE, Anantharaman K, Venturelli OS. Polysaccharide utilization loci in Bacteroides determine population fitness and community-level interactions. Cell Host & Microbe. PMID 34995484 DOI: 10.1016/j.chom.2021.12.006 |
0.608 |
|
| 2021 |
Tran PQ, Anantharaman K. Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling. Msystems. 6: e0113821. PMID 34636672 DOI: 10.1128/mSystems.01138-21 |
0.756 |
|
| 2021 |
Kieft K, Breister AM, Huss P, Linz AM, Zanetakos E, Zhou Z, Rahlff J, Esser SP, Probst AJ, Raman S, Roux S, Anantharaman K. Virus-associated organosulfur metabolism in human and environmental systems. Cell Reports. 36: 109471. PMID 34348151 DOI: 10.1016/j.celrep.2021.109471 |
0.802 |
|
| 2021 |
Kieft K, Zhou Z, Anderson RE, Buchan A, Campbell BJ, Hallam SJ, Hess M, Sullivan MB, Walsh DA, Roux S, Anantharaman K. Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages. Nature Communications. 12: 3503. PMID 34108477 DOI: 10.1038/s41467-021-23698-5 |
0.815 |
|
| 2021 |
Mangalea MR, Paez-Espino D, Kieft K, Chatterjee A, Chriswell ME, Seifert JA, Feser ML, Demoruelle MK, Sakatos A, Anantharaman K, Deane KD, Kuhn KA, Holers VM, Duerkop BA. Individuals at risk for rheumatoid arthritis harbor differential intestinal bacteriophage communities with distinct metabolic potential. Cell Host & Microbe. PMID 33957082 DOI: 10.1016/j.chom.2021.03.020 |
0.748 |
|
| 2021 |
Tran PQ, Bachand SC, McIntyre PB, Kraemer BM, Vadeboncoeur Y, Kimirei IA, Tamatamah R, McMahon KD, Anantharaman K. Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika. The Isme Journal. PMID 33564113 DOI: 10.1038/s41396-021-00898-x |
0.793 |
|
| 2020 |
Murray AE, Freudenstein J, Gribaldo S, Hatzenpichler R, Hugenholtz P, Kämpfer P, Konstantinidis KT, Lane CE, Papke RT, Parks DH, Rossello-Mora R, Stott MB, Sutcliffe IC, Thrash JC, Venter SN, ... ... Anantharaman K, et al. Author Correction: Roadmap for naming uncultivated Archaea and Bacteria. Nature Microbiology. PMID 33184503 DOI: 10.1038/s41564-020-00827-2 |
0.515 |
|
| 2020 |
Zhou Z, Liu Y, Pan J, Cron BR, Toner BM, Anantharaman K, Breier JA, Dick GJ, Li M. Gammaproteobacteria mediating utilization of methyl-, sulfur- and petroleum organic compounds in deep ocean hydrothermal plumes. The Isme Journal. PMID 32820229 DOI: 10.1038/S41396-020-00745-5 |
0.706 |
|
| 2020 |
McDaniel EA, Peterson BD, Stevens SLR, Tran PQ, Anantharaman K, McMahon KD. Expanded Phylogenetic Diversity and Metabolic Flexibility of Mercury-Methylating Microorganisms. Msystems. 5. PMID 32817383 DOI: 10.1128/mSystems.00299-20 |
0.786 |
|
| 2020 |
Kieft K, Zhou Z, Anantharaman K. VIBRANT: automated recovery, annotation and curation of microbial viruses, and evaluation of viral community function from genomic sequences. Microbiome. 8: 90. PMID 32522236 DOI: 10.1186/s40168-020-00867-0 |
0.833 |
|
| 2020 |
Murray AE, Freudenstein J, Gribaldo S, Hatzenpichler R, Hugenholtz P, Kämpfer P, Konstantinidis KT, Lane CE, Papke RT, Parks DH, Rossello-Mora R, Stott MB, Sutcliffe IC, Thrash JC, Venter SN, ... ... Anantharaman K, et al. Roadmap for naming uncultivated Archaea and Bacteria. Nature Microbiology. PMID 32514073 DOI: 10.1038/S41564-020-0733-X |
0.654 |
|
| 2020 |
Zhou Z, Tran PQ, Kieft K, Anantharaman K. Genome diversification in globally distributed novel marine Proteobacteria is linked to environmental adaptation. The Isme Journal. PMID 32393808 DOI: 10.1038/s41396-020-0669-4 |
0.81 |
|
| 2020 |
Chen LX, Anantharaman K, Shaiber A, Eren AM, Banfield JF. Accurate and complete genomes from metagenomes. Genome Research. PMID 32188701 DOI: 10.1101/Gr.258640.119 |
0.588 |
|
| 2020 |
Al-Shayeb B, Sachdeva R, Chen LX, Ward F, Munk P, Devoto A, Castelle CJ, Olm MR, Bouma-Gregson K, Amano Y, He C, Méheust R, Brooks B, Thomas A, Lavy A, ... ... Anantharaman K, et al. Clades of huge phages from across Earth's ecosystems. Nature. PMID 32051592 DOI: 10.1038/S41586-020-2007-4 |
0.801 |
|
| 2019 |
Diamond S, Andeer PF, Li Z, Crits-Christoph A, Burstein D, Anantharaman K, Lane KR, Thomas BC, Pan C, Northen TR, Banfield JF. Mediterranean grassland soil C-N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms. Nature Microbiology. PMID 31110364 DOI: 10.1038/S41564-019-0449-Y |
0.55 |
|
| 2019 |
Matheus Carnevali PB, Schulz F, Castelle CJ, Kantor RS, Shih PM, Sharon I, Santini JM, Olm MR, Amano Y, Thomas BC, Anantharaman K, Burstein D, Becraft ED, Stepanauskas R, Woyke T, et al. Author Correction: Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria. Nature Communications. 10: 1451. PMID 30914645 DOI: 10.1038/S41467-019-09423-3 |
0.377 |
|
| 2019 |
Bouma-Gregson K, Olm MR, Probst AJ, Anantharaman K, Power ME, Banfield JF. Impacts of microbial assemblage and environmental conditions on the distribution of anatoxin-a producing cyanobacteria within a river network. The Isme Journal. PMID 30809011 DOI: 10.1038/S41396-019-0374-3 |
0.55 |
|
| 2019 |
Devoto AE, Santini JM, Olm MR, Anantharaman K, Munk P, Tung J, Archie EA, Turnbaugh PJ, Seed KD, Blekhman R, Aarestrup FM, Thomas BC, Banfield JF. Megaphages infect Prevotella and variants are widespread in gut microbiomes. Nature Microbiology. PMID 30692672 DOI: 10.1038/S41564-018-0338-9 |
0.592 |
|
| 2019 |
Matheus Carnevali PB, Schulz F, Castelle CJ, Kantor RS, Shih PM, Sharon I, Santini JM, Olm MR, Amano Y, Thomas BC, Anantharaman K, Burstein D, Becraft ED, Stepanauskas R, Woyke T, et al. Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria. Nature Communications. 10: 463. PMID 30692531 DOI: 10.1038/S41467-018-08246-Y |
0.56 |
|
| 2018 |
Linz AM, He S, Stevens SLR, Anantharaman K, Rohwer RR, Malmstrom RR, Bertilsson S, McMahon KD. Freshwater carbon and nutrient cycles revealed through reconstructed population genomes. Peerj. 6: e6075. PMID 30581671 DOI: 10.7717/Peerj.6075 |
0.426 |
|
| 2018 |
Castelle CJ, Brown CT, Anantharaman K, Probst AJ, Huang RH, Banfield JF. Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations. Nature Reviews. Microbiology. PMID 30181663 DOI: 10.1038/S41579-018-0076-2 |
0.589 |
|
| 2018 |
Anantharaman K, Hausmann B, Jungbluth SP, Kantor RS, Lavy A, Warren LA, Rappé MS, Pester M, Loy A, Thomas BC, Banfield JF. Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle. The Isme Journal. PMID 29467397 DOI: 10.1038/S41396-018-0078-0 |
0.597 |
|
| 2018 |
Probst AJ, Ladd B, Jarett JK, Geller-McGrath DE, Sieber CMK, Emerson JB, Anantharaman K, Thomas BC, Malmstrom RR, Stieglmeier M, Klingl A, Woyke T, Ryan MC, Banfield JF. Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface. Nature Microbiology. PMID 29379208 DOI: 10.1038/S41564-017-0098-Y |
0.604 |
|
| 2017 |
Zecchin S, Mueller RC, Seifert J, Stingl U, Anantharaman K, von Bergen M, Cavalca L, Pester M. Rice paddy Nitrospirae encode and express genes related to sulfate respiration: proposal of the new genus Candidatus Sulfobium. Applied and Environmental Microbiology. PMID 29247059 DOI: 10.1128/Aem.02224-17 |
0.344 |
|
| 2017 |
Banfield JF, Anantharaman K, Williams KH, Thomas BC. Complete 4.55-Megabase-Pair Genome of "Candidatus Fluviicola riflensis," Curated from Short-Read Metagenomic Sequences. Genome Announcements. 5. PMID 29167246 DOI: 10.1128/Genomea.01299-17 |
0.515 |
|
| 2017 |
Hernsdorf AW, Amano Y, Miyakawa K, Ise K, Suzuki Y, Anantharaman K, Probst A, Burstein D, Thomas BC, Banfield JF. Potential for microbial H2 and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments. The Isme Journal. PMID 28350393 DOI: 10.1038/Ismej.2017.39 |
0.664 |
|
| 2017 |
Kantor RS, Huddy RJ, Iyer RM, Thomas BC, Brown CT, Anantharaman K, Tringe SG, Hettich RL, Harrison ST, Banfield JF. Genome-resolved meta-omics ties microbial dynamics to process performance in biotechnology for thiocyanate degradation. Environmental Science & Technology. PMID 28139919 DOI: 10.1021/Acs.Est.6B04477 |
0.533 |
|
| 2017 |
Zaremba-Niedzwiedzka K, Caceres EF, Saw JH, Bäckström D, Juzokaite L, Vancaester E, Seitz KW, Anantharaman K, Starnawski P, Kjeldsen KU, Stott MB, Nunoura T, Banfield JF, Schramm A, Baker BJ, et al. Asgard archaea illuminate the origin of eukaryotic cellular complexity. Nature. PMID 28077874 DOI: 10.1038/Nature21031 |
0.678 |
|
| 2016 |
Burstein D, Harrington LB, Strutt SC, Probst AJ, Anantharaman K, Thomas BC, Doudna JA, Banfield JF. New CRISPR-Cas systems from uncultivated microbes. Nature. PMID 28005056 DOI: 10.1038/Nature21059 |
0.474 |
|
| 2016 |
Marcus DN, Pinto A, Anantharaman K, Ruberg SA, Kramer EL, Raskin L, Dick GJ. Diverse manganese(II)-oxidizing bacteria are prevalent in drinking water systems. Environmental Microbiology Reports. PMID 27935222 DOI: 10.1111/1758-2229.12508 |
0.534 |
|
| 2016 |
Anantharaman K, Brown CT, Hug LA, Sharon I, Castelle CJ, Probst AJ, Thomas BC, Singh A, Wilkins MJ, Karaoz U, Brodie EL, Williams KH, Hubbard SS, Banfield JF. Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system. Nature Communications. 7: 13219. PMID 27774985 DOI: 10.1038/Ncomms13219 |
0.621 |
|
| 2016 |
Hug LA, Baker BJ, Anantharaman K, Brown CT, Probst AJ, Castelle CJ, Butterfield CN, Hernsdorf AW, Amano Y, Ise K, Suzuki Y, Dudek N, Relman DA, Finstad KM, Amundson R, et al. A new view of the tree of life. Nature Microbiology. 1: 16048. PMID 27572647 DOI: 10.1038/Nmicrobiol.2016.48 |
0.764 |
|
| 2016 |
Probst AJ, Castelle CJ, Singh A, Brown CT, Anantharaman K, Sharon I, Hug LA, Burstein D, Emerson JB, Thomas BC, Banfield JF. Genomic resolution of a cold subsurface aquifer community provides metabolic insights for novel microbes adapted to high CO2 concentrations. Environmental Microbiology. PMID 27112493 DOI: 10.1111/1462-2920.13362 |
0.564 |
|
| 2016 |
Anantharaman K, Brown CT, Burstein D, Castelle CJ, Probst AJ, Thomas BC, Williams KH, Banfield JF. Analysis of five complete genome sequences for members of the class Peribacteria in the recently recognized Peregrinibacteria bacterial phylum. Peerj. 4: e1607. PMID 26844018 DOI: 10.7717/Peerj.1607 |
0.565 |
|
| 2016 |
Burstein D, Sun CL, Brown CT, Sharon I, Anantharaman K, Probst AJ, Thomas BC, Banfield JF. Major bacterial lineages are essentially devoid of CRISPR-Cas viral defence systems. Nature Communications. 7: 10613. PMID 26837824 DOI: 10.1038/Ncomms10613 |
0.506 |
|
| 2016 |
Anantharaman K, Breier JA, Dick GJ. Metagenomic resolution of microbial functions in deep-sea hydrothermal plumes across the Eastern Lau Spreading Center. The Isme Journal. 10: 225-39. PMID 26046257 DOI: 10.1038/Ismej.2015.81 |
0.677 |
|
| 2015 |
Varaljay VA, Satagopan S, North JA, Witte B, Dourado MN, Anantharaman K, Arbing MA, Hoeft McCann S, Oremland RS, Banfield JF, Wrighton KC, Tabita FR. Functional metagenomic selection of RubisCO from uncultivated bacteria. Environmental Microbiology. PMID 26617072 DOI: 10.1111/1462-2920.13138 |
0.484 |
|
| 2015 |
Li M, Baker BJ, Anantharaman K, Jain S, Breier JA, Dick GJ. Genomic and transcriptomic evidence for scavenging of diverse organic compounds by widespread deep-sea archaea. Nature Communications. 6: 8933. PMID 26573375 DOI: 10.1038/Ncomms9933 |
0.756 |
|
| 2015 |
Reed DC, Breier JA, Jiang H, Anantharaman K, Klausmeier CA, Toner BM, Hancock C, Speer K, Thurnherr AM, Dick GJ. Predicting the response of the deep-ocean microbiome to geochemical perturbations by hydrothermal vents. The Isme Journal. PMID 25658053 DOI: 10.1038/Ismej.2015.4 |
0.61 |
|
| 2015 |
Sheik CS, Anantharaman K, Breier JA, Sylvan JB, Edwards KJ, Dick GJ. Spatially resolved sampling reveals dynamic microbial communities in rising hydrothermal plumes across a back-arc basin. The Isme Journal. 9: 1434-45. PMID 25489728 DOI: 10.1038/Ismej.2014.228 |
0.588 |
|
| 2014 |
Anantharaman K, Duhaime MB, Breier JA, Wendt KA, Toner BM, Dick GJ. Sulfur oxidation genes in diverse deep-sea viruses. Science (New York, N.Y.). 344: 757-60. PMID 24789974 DOI: 10.1126/Science.1252229 |
0.662 |
|
| 2014 |
Vorobev A, Jagadevan S, Jain S, Anantharaman K, Dick GJ, Vuilleumier S, Semrau JD. Genomic and transcriptomic analyses of the facultative methanotroph Methylocystis sp. strain SB2 grown on methane or ethanol. Applied and Environmental Microbiology. 80: 3044-52. PMID 24610846 DOI: 10.1128/Aem.00218-14 |
0.551 |
|
| 2013 |
Dick GJ, Anantharaman K, Baker BJ, Li M, Reed DC, Sheik CS. The microbiology of deep-sea hydrothermal vent plumes: ecological and biogeographic linkages to seafloor and water column habitats. Frontiers in Microbiology. 4: 124. PMID 23720658 DOI: 10.3389/Fmicb.2013.00124 |
0.745 |
|
| 2013 |
Anantharaman K, Breier JA, Sheik CS, Dick GJ. Evidence for hydrogen oxidation and metabolic plasticity in widespread deep-sea sulfur-oxidizing bacteria. Proceedings of the National Academy of Sciences of the United States of America. 110: 330-5. PMID 23263870 DOI: 10.1073/Pnas.1215340110 |
0.596 |
|
| 2012 |
Lesniewski RA, Jain S, Anantharaman K, Schloss PD, Dick GJ. The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and lithotrophs. The Isme Journal. 6: 2257-68. PMID 22695860 DOI: 10.1038/Ismej.2012.63 |
0.639 |
|
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