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Gregory P. Fournier, PhD - Publications

Affiliations: 
2014- Earth, Atmospheric & Planetary Sciences Massachusetts Institute of Technology, Cambridge, MA, United States 
Area:
Geobiology, Phylogenetics, Microbiology
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Rangel LT, Fournier GP. Fast-Evolving Alignment Sites Are Highly Informative for Reconstructions of Deep Tree of Life Phylogenies. Microorganisms. 11. PMID 37894157 DOI: 10.3390/microorganisms11102499  0.76
2023 Schwartz SL, Rangel LT, Payette JG, Fournier GP. A Proterozoic microbial origin of extant cyanide-hydrolyzing enzyme diversity. Frontiers in Microbiology. 14: 1130310. PMID 37065136 DOI: 10.3389/fmicb.2023.1130310  0.751
2023 Mondal A, Rangel LT, Payette JG, Fournier GP, Bansal MS. DaTeR: Error-Correcting Phylogenetic Chronograms Using Relative Time Constraints. Bioinformatics (Oxford, England). PMID 36752504 DOI: 10.1093/bioinformatics/btad084  0.752
2022 Fournier GP, Parsons CW, Cutts EM, Tamre E. Standard Candles for Dating Microbial Lineages. Methods in Molecular Biology (Clifton, N.J.). 2569: 41-74. PMID 36083443 DOI: 10.1007/978-1-0716-2691-7_3  0.397
2022 Schwartz SL, Momper L, Rangel LT, Magnabosco C, Amend JP, Fournier GP. Novel nitrite reductase domain structure suggests a chimeric denitrification repertoire in the phylum Chloroflexi. Microbiologyopen. 11: e1258. PMID 35212484 DOI: 10.1002/mbo3.1258  0.756
2021 Rangel LT, Soucy SM, Setubal JC, Gogarten JP, Fournier GP. An efficient, non-phylogenetic method for detecting genes sharing evolutionary signals in phylogenomic datasets. Genome Biology and Evolution. PMID 34390574 DOI: 10.1093/gbe/evab187  0.763
2020 Wade T, Rangel LT, Kundu S, Fournier GP, Bansal MS. Assessing the accuracy of phylogenetic rooting methods on prokaryotic gene families. Plos One. 15: e0232950. PMID 32413061 DOI: 10.1371/Journal.Pone.0232950  0.785
2019 Moore KR, Magnabosco C, Momper L, Gold DA, Bosak T, Fournier GP. An Expanded Ribosomal Phylogeny of Cyanobacteria Supports a Deep Placement of Plastids. Frontiers in Microbiology. 10: 1612. PMID 31354692 DOI: 10.3389/Fmicb.2019.01612  0.49
2019 Gruen DS, Wolfe JM, Fournier GP. Paleozoic diversification of terrestrial chitin-degrading bacterial lineages. Bmc Evolutionary Biology. 19: 34. PMID 30691393 DOI: 10.1186/S12862-019-1357-8  0.637
2018 Wolfe JM, Fournier GP. Reply to 'Molecular clocks provide little information to date methanogenic Archaea'. Nature Ecology & Evolution. PMID 30250155 DOI: 10.1038/S41559-018-0685-1  0.541
2018 Fournier GP, Poole AM. A Briefly Argued Case That Asgard Archaea Are Part of the Eukaryote Tree. Frontiers in Microbiology. 9: 1896. PMID 30158917 DOI: 10.3389/Fmicb.2018.01896  0.463
2018 Wolfe JM, Fournier GP. Horizontal gene transfer constrains the timing of methanogen evolution. Nature Ecology & Evolution. PMID 29610466 DOI: 10.1038/S41559-018-0513-7  0.674
2018 Magnabosco C, Moore KR, Wolfe JM, Fournier GP. Dating phototropic microbial lineages with reticulate gene histories. Geobiology. PMID 29384268 DOI: 10.1111/Gbi.12273  0.642
2017 Cantine MD, Fournier GP. Environmental Adaptation from the Origin of Life to the Last Universal Common Ancestor. Origins of Life and Evolution of the Biosphere : the Journal of the International Society For the Study of the Origin of Life. PMID 28685374 DOI: 10.1007/S11084-017-9542-5  0.371
2017 Gold DA, Caron A, Fournier GP, Summons RE. Paleoproterozoic sterol biosynthesis and the rise of oxygen. Nature. PMID 28264195 DOI: 10.1038/Nature21412  0.422
2015 Fournier GP, Andam CP, Gogarten JP. Ancient horizontal gene transfer and the last common ancestors. Bmc Evolutionary Biology. 15: 70. PMID 25897759 DOI: 10.1186/S12862-015-0350-0  0.8
2015 Fournier GP, Alm EJ. Ancestral Reconstruction of a Pre-LUCA Aminoacyl-tRNA Synthetase Ancestor Supports the Late Addition of Trp to the Genetic Code. Journal of Molecular Evolution. 80: 171-85. PMID 25791872 DOI: 10.1007/S00239-015-9672-1  0.617
2014 Rothman DH, Fournier GP, French KL, Alm EJ, Boyle EA, Cao C, Summons RE. Methanogenic burst in the end-Permian carbon cycle. Proceedings of the National Academy of Sciences of the United States of America. 111: 5462-7. PMID 24706773 DOI: 10.1073/Pnas.1318106111  0.549
2012 Fournier GP, Andam CP, Alm EJ, Gogarten JP. Erratum to: Molecular Evolution of Aminoacyl tRNA Synthetase Proteins in the Early History of Life Origins of Life and Evolution of Biospheres. 42: 377-377. DOI: 10.1007/S11084-012-9294-1  0.793
2011 Fournier GP, Andam CP, Alm EJ, Gogarten JP. Molecular evolution of aminoacyl tRNA synthetase proteins in the early history of life. Origins of Life and Evolution of the Biosphere : the Journal of the International Society For the Study of the Origin of Life. 41: 621-32. PMID 22200905 DOI: 10.1007/S11084-011-9261-2  0.798
2011 Williams D, Fournier GP, Lapierre P, Swithers KS, Green AG, Andam CP, Gogarten JP. A rooted net of life. Biology Direct. 6: 45. PMID 21936906 DOI: 10.1186/1745-6150-6-45  0.815
2011 Swithers KS, Fournier GP, Green AG, Gogarten JP, Lapierre P. Reassessment of the lineage fusion hypothesis for the origin of double membrane bacteria. Plos One. 6: e23774. PMID 21876769 DOI: 10.1371/Journal.Pone.0023774  0.774
2011 Andam CP, Fournier GP, Gogarten JP. Multilevel populations and the evolution of antibiotic resistance through horizontal gene transfer. Fems Microbiology Reviews. 35: 756-67. PMID 21521245 DOI: 10.1111/J.1574-6976.2011.00274.X  0.759
2011 Fournier GP, Dick AA, Williams D, Gogarten JP. Evolution of the Archaea: emerging views on origins and phylogeny. Research in Microbiology. 162: 92-8. PMID 21034818 DOI: 10.1016/J.Resmic.2010.09.016  0.77
2010 Fournier GP, Neumann JE, Gogarten JP. Inferring the ancient history of the translation machinery and genetic code via recapitulation of ribosomal subunit assembly orders. Plos One. 5: e9437. PMID 20208990 DOI: 10.1371/Journal.Pone.0009437  0.713
2010 Fournier GP, Gogarten JP. Rooting the ribosomal tree of life. Molecular Biology and Evolution. 27: 1792-801. PMID 20194428 DOI: 10.1093/Molbev/Msq057  0.758
2009 Swithers KS, Senejani AG, Fournier GP, Gogarten JP. Conservation of intron and intein insertion sites: implications for life histories of parasitic genetic elements. Bmc Evolutionary Biology. 9: 303. PMID 20043855 DOI: 10.1186/1471-2148-9-303  0.767
2009 Swithers KS, Gogarten JP, Fournier GP. Trees in the web of life. Journal of Biology. 8: 54. PMID 19664165 DOI: 10.1186/Jbiol160  0.803
2009 Fournier GP, Huang J, Gogarten JP. Horizontal gene transfer from extinct and extant lineages: biological innovation and the coral of life. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 364: 2229-39. PMID 19571243 DOI: 10.1098/Rstb.2009.0033  0.789
2009 Zhaxybayeva O, Swithers KS, Lapierre P, Fournier GP, Bickhart DM, DeBoy RT, Nelson KE, Nesbø CL, Doolittle WF, Gogarten JP, Noll KM. On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales. Proceedings of the National Academy of Sciences of the United States of America. 106: 5865-70. PMID 19307556 DOI: 10.1073/Pnas.0901260106  0.803
2009 Fournier G. Horizontal gene transfer and the evolution of methanogenic pathways Methods in Molecular Biology (Clifton, N.J.). 532: 163-179. PMID 19271184 DOI: 10.1007/978-1-60327-853-9_9  0.378
2008 Fournier GP, Gogarten JP. Evolution of acetoclastic methanogenesis in Methanosarcina via horizontal gene transfer from cellulolytic Clostridia. Journal of Bacteriology. 190: 1124-7. PMID 18055595 DOI: 10.1128/Jb.01382-07  0.752
2008 Gogarten JP, Fournier G, Zhaxybayeva O. Gene transfer and the reconstruction of life's early history from genomic data Space Science Reviews. 135: 115-131. DOI: 10.1007/978-0-387-77516-6_10  0.833
2007 Fournier GP, Gogarten JP. Signature of a primitive genetic code in ancient protein lineages. Journal of Molecular Evolution. 65: 425-36. PMID 17922074 DOI: 10.1007/S00239-007-9024-X  0.718
2003 Wei J, Goldberg MB, Burland V, Venkatesan MM, Deng W, Fournier G, Mayhew GF, Plunkett G, Rose DJ, Darling A, Mau B, Perna NT, Payne SM, Runyen-Janecky LJ, Zhou S, et al. Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T. Infection and Immunity. 71: 2775-86. PMID 12704152 DOI: 10.1128/Iai.71.5.2775-2786.2003  0.399
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