Joshua N. Burton - Publications

Affiliations: 
Genome Sciences University of Washington, Seattle, Seattle, WA 

16/52 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Soza VL, Lindsley D, Waalkes A, Ramage E, Patwardhan RP, Burton JN, Adey A, Kumar A, Qiu R, Shendure J, Hall B. The Rhododendron genome and chromosomal organization provide insight into shared whole genome duplications across the heath family (Ericaceae). Genome Biology and Evolution. PMID 31702783 DOI: 10.1093/Gbe/Evz245  0.788
2017 Heil CS, Burton JN, Liachko I, Friedrich A, Hanson NA, Morris CL, Schacherer J, Shendure J, Thomas JH, Dunham MJ. Identification of a novel interspecific hybrid yeast from a metagenomic spontaneously inoculated beer sample using Hi-C. Yeast (Chichester, England). PMID 28892574 DOI: 10.1002/Yea.3280  0.712
2017 Roach DJ, Burton JN, Lee C, Stackhouse B, Butler-Wu SM, Cookson BT, Shendure J, Salipante SJ. Correction: A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota. Plos Genetics. 13: e1006724. PMID 28410416 DOI: 10.1371/journal.pgen.1006724  0.699
2017 Bickhart DM, Rosen BD, Koren S, Sayre BL, Hastie AR, Chan S, Lee J, Lam ET, Liachko I, Sullivan ST, Burton JN, Huson HJ, Nystrom JC, Kelley CM, Hutchison JL, et al. Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome. Nature Genetics. PMID 28263316 DOI: 10.1038/Ng.3802  0.681
2015 Roach DJ, Burton JN, Lee C, Stackhouse B, Butler-Wu SM, Cookson BT, Shendure J, Salipante SJ. A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota. Plos Genetics. 11: e1005413. PMID 26230489 DOI: 10.1371/Journal.Pgen.1005413  0.763
2015 Varoquaux N, Liachko I, Ay F, Burton JN, Shendure J, Dunham MJ, Vert JP, Noble WS. Accurate identification of centromere locations in yeast genomes using Hi-C. Nucleic Acids Research. 43: 5331-9. PMID 25940625 DOI: 10.1093/Nar/Gkv424  0.707
2015 Roach DJ, Burton JN, Lee C, Stackhouse B, Butler-Wu SM, Cookson BT, Shendure J, Salipante SJ. A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota Plos Genetics. 11. DOI: 10.1371/journal.pgen.1005413  0.707
2014 Adey A, Kitzman JO, Burton JN, Daza R, Kumar A, Christiansen L, Ronaghi M, Amini S, Gunderson KL, Steemers FJ, Shendure J. In vitro, long-range sequence information for de novo genome assembly via transposase contiguity. Genome Research. 24: 2041-9. PMID 25327137 DOI: 10.1101/Gr.178319.114  0.81
2014 Burton JN, Liachko I, Dunham MJ, Shendure J. Species-level deconvolution of metagenome assemblies with Hi-C-based contact probability maps. G3 (Bethesda, Md.). 4: 1339-46. PMID 24855317 DOI: 10.1534/G3.114.011825  0.676
2014 Taylor SD, Ericson NG, Burton JN, Prolla TA, Silber JR, Shendure J, Bielas JH. Targeted enrichment and high-resolution digital profiling of mitochondrial DNA deletions in human brain Aging Cell. 13: 29-38. PMID 23911137 DOI: 10.1111/Acel.12146  0.591
2014 Adey A, Kitzman JO, Burton JN, Daza R, Kumar A, Christiansen L, Ronaghi M, Amini S, Gunderson KL, Steemers FJ, Shendure J. In vitro, long-range sequence information for de novo genome assembly via transposase contiguity Genome Research. 24: 2041-2049. DOI: 10.1101/gr.178319.114  0.793
2013 Burton JN, Adey A, Patwardhan RP, Qiu R, Kitzman JO, Shendure J. Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions Nature Biotechnology. 31: 1119-1125. PMID 24185095 DOI: 10.1038/Nbt.2727  0.764
2013 Laurie MT, Bertout JA, Taylor SD, Burton JN, Shendure JA, Bielas JH. Simultaneous digital quantification and fluorescence-based size characterization of massively parallel sequencing libraries Biotechniques. 55: 61-67. PMID 23931593 DOI: 10.2144/000114063  0.559
2013 Adey A, Burton JN, Kitzman JO, Hiatt JB, Lewis AP, Martin BK, Qiu R, Lee C, Shendure J. The haplotype-resolved genome and epigenome of the aneuploid HeLa cancer cell line. Nature. 500: 207-11. PMID 23925245 DOI: 10.1038/Nature12064  0.711
2011 Gnerre S, Maccallum I, Przybylski D, Ribeiro FJ, Burton JN, Walker BJ, Sharpe T, Hall G, Shea TP, Sykes S, Berlin AM, Aird D, Costello M, Daza R, Williams L, et al. High-quality draft assemblies of mammalian genomes from massively parallel sequence data. Proceedings of the National Academy of Sciences of the United States of America. 108: 1513-8. PMID 21187386 DOI: 10.1073/Pnas.1017351108  0.705
2009 Maccallum I, Przybylski D, Gnerre S, Burton J, Shlyakhter I, Gnirke A, Malek J, McKernan K, Ranade S, Shea TP, Williams L, Young S, Nusbaum C, Jaffe DB. ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads. Genome Biology. 10: R103. PMID 19796385 DOI: 10.1186/Gb-2009-10-10-R103  0.668
Low-probability matches (unlikely to be authored by this person)
2015 Fitzgerald TW, Gerety SS, Jones WD, Van Kogelenberg M, King DA, McRae J, Morley KI, Parthiban V, Al-Turki S, Ambridge K, Barrett DM, Bayzetinova T, Clayton S, Coomber EL, Gribble S, ... ... Burton J, et al. Large-scale discovery of novel genetic causes of developmental disorders Nature. 519: 223-228. DOI: 10.1038/Nature14135  0.16
2021 Burton J, Manning CS, Rattray M, Papalopulu N, Kursawe J. Inferring kinetic parameters of oscillatory gene regulation from single cell time-series data. Journal of the Royal Society, Interface. 18: 20210393. PMID 34583566 DOI: 10.1098/rsif.2021.0393  0.125
2022 Overton CE, Pellis L, Stage HB, Scarabel F, Burton J, Fraser C, Hall I, House TA, Jewell C, Nurtay A, Pagani F, Lythgoe KA. EpiBeds: Data informed modelling of the COVID-19 hospital burden in England. Plos Computational Biology. 18: e1010406. PMID 36067224 DOI: 10.1371/journal.pcbi.1010406  0.117
2020 Burton J, Umu SU, Langseth H, Grotmol T, Grimsrud TK, Haugen TB, Rounge TB. Serum RNA Profiling in the 10-Years Period Prior to Diagnosis of Testicular Germ Cell Tumor. Frontiers in Oncology. 10: 574977. PMID 33251139 DOI: 10.3389/fonc.2020.574977  0.114
2019 Burton JN, Fredrickson AG, Capunay C, Tanner L, Oberg C, Santamaria N, Gefen A, Call E. New Clinically Relevant Method to Evaluate the Life Span of Prophylactic Sacral Dressings. Advances in Skin & Wound Care. 32: S14-S20. PMID 31219897 DOI: 10.1097/01.ASW.0000558697.53057.8e  0.106
2022 Burton J, Wojewodzic MW, Rounge TB, Haugen TB. A Role of the TEX101 Interactome in the Common Aetiology Behind Male Subfertility and Testicular Germ Cell Tumor. Frontiers in Oncology. 12: 892043. PMID 35774118 DOI: 10.3389/fonc.2022.892043  0.104
2014 Zhang X, Burton J, Jin Z, Xiao M, Fan A, Xu J. Isotope studies of human remains from Mayutian, Yunnan Province, China Journal of Archaeological Science. 50: 414-419. DOI: 10.1016/j.jas.2014.08.001  0.086
2015 Zhornitsky S, Greenfield J, Koch MW, Patten SB, Harris C, Wall W, Alikhani K, Burton J, Busche K, Costello F, Davenport JW, Jarvis SE, Lavarato D, Parpal H, Patry DG, et al. Long-term persistence with injectable therapy in relapsing-remitting multiple sclerosis: an 18-year observational cohort study. Plos One. 10: e0123824. PMID 25867095 DOI: 10.1371/Journal.Pone.0123824  0.082
2015 Kim SH, Burton J, Yu CR, Sun L, He C, Wang H, Morse HC, Egwuagu CE. Dual Function of the IRF8 Transcription Factor in Autoimmune Uveitis: Loss of IRF8 in T Cells Exacerbates Uveitis, Whereas Irf8 Deletion in the Retina Confers Protection. Journal of Immunology (Baltimore, Md. : 1950). PMID 26163590 DOI: 10.4049/jimmunol.1500653  0.069
2007 Kerby JD, MacLennan PA, Burton JN, McGwin G, Rue LW. Agreement between prehospital and emergency department glasgow coma scores. The Journal of Trauma. 63: 1026-31. PMID 17993947 DOI: 10.1097/Ta.0B013E318157D9E8  0.068
2019 Burton JN, Fredrickson AG, Capunay C, Tanner L, Oberg C, Santamaria N, Gefen A, Call E. Measuring Tensile Strength to Better Establish Protective Capacity of Sacral Prophylactic Dressings Over 7 Days of Laboratory Aging. Advances in Skin & Wound Care. 32: S21-S27. PMID 31219898 DOI: 10.1097/01.ASW.0000558694.20067.4f  0.063
2017 Call E, Hetzel T, McLean C, Burton JN, Oberg C. Off loading wheelchair cushion provides best case reduction in tissue deformation as indicated by MRI. Journal of Tissue Viability. PMID 28532968 DOI: 10.1016/j.jtv.2017.05.002  0.062
2018 Wilson M, Riedy SM, Himmel M, English A, Burton J, Albritton S, Johnson K, Morgan P, Van Dongen HPA. Sleep quality, sleepiness and the influence of workplace breaks: A cross-sectional survey of health-care workers in two US hospitals. Chronobiology International. 1-4. PMID 29737881 DOI: 10.1080/07420528.2018.1466791  0.061
2003 Tomlinson ID, Mason J, Burton JN, Blakely R, Rosenthal SJ. The design and synthesis of novel derivatives of the dopamine uptake inhibitors GBR 12909 and GBR 12935. High-affinity dopaminergic ligands for conjugation with highly fluorescent cadmium selenide/zinc sulfide core/shell nanocrystals Tetrahedron. 59: 8035-8047. DOI: 10.1016/S0040-4020(03)01179-7  0.061
2015 Ren X, Burton J, Seidel GD, Lafdi K. Computational multiscale modeling and characterization of piezoresistivity in fuzzy fiber reinforced polymer composites International Journal of Solids and Structures. 54: 121-134. DOI: 10.1016/J.Ijsolstr.2014.10.034  0.047
2024 Williamson RE, Macia KS, Burton J, Wickham RE. Mapping the Pathways Between Posttraumatic Stress Disorder, Depression, and Alcohol and Cannabis Use: A Network Analysis. Journal of Dual Diagnosis. 1-9. PMID 38555875 DOI: 10.1080/15504263.2024.2330620  0.043
2015 Rice J, Roberts H, Burton J, Pan J, States V, Rai SN, Galandiuk S. Assay reproducibility in clinical studies of plasma miRNA. Plos One. 10: e0121948. PMID 25853871 DOI: 10.1371/Journal.Pone.0121948  0.04
2015 Costantino T, Burton J, Tayal V, Cone DC. Ultrasound competency and practice: What's in a number? Academic Emergency Medicine. 22: 597-599. DOI: 10.1111/acem.12662  0.035
2015 Masghouni N, Burton J, Philen MK, Al-Haik M. Investigating the energy harvesting capabilities of a hybrid ZnO nanowires/carbon fiber polymer composite beam Nanotechnology. 26. DOI: 10.1088/0957-4484/26/9/095401  0.034
2015 Jäckle A, Lynn P, Burton J. Going online with a face-to-face household panel: Effects of a mixed mode design on item and unit non-response Survey Research Methods. 9: 57-70.  0.033
2015 Pedrini MJ, Seewann A, Bennett KA, Wood AJ, James I, Burton J, Marshall BJ, Carroll WM, Kermode AG. Helicobacter pylori infection as a protective factor against multiple sclerosis risk in females. Journal of Neurology, Neurosurgery, and Psychiatry. 86: 603-7. PMID 25602009 DOI: 10.1136/jnnp-2014-309495  0.033
2015 Redfern H, Burton J, Lonne B, Seiffert H. Social Work and Complex Care Systems: The Case of People Hospitalised with a Disability Australian Social Work. DOI: 10.1080/0312407X.2015.1035295  0.029
2015 Cain KP, Marano N, Kamene M, Sitienei J, Mukherjee S, Galev A, Burton J, Nasibov O, Kioko J, De Cock KM. The movement of multidrug-resistant tuberculosis across borders in East Africa needs a regional and global solution. Plos Medicine. 12: e1001791. PMID 25710472 DOI: 10.1371/journal.pmed.1001791  0.027
2022 Soto X, Burton J, Manning CS, Minchington T, Lea R, Lee J, Kursawe J, Rattray M, Papalopulu N. Sequential and additive expression of miR-9 precursors control timing of neurogenesis. Development (Cambridge, England). 149. PMID 36189829 DOI: 10.1242/dev.200474  0.024
2015 Engin D, Burton J, Darab I, Kimpel F, Gupta S. Yb-fiber-MOPA based high energy and average power uplink laser beacon for deep space communication operating under Nested PPM format Proceedings of Spie - the International Society For Optical Engineering. 9466. DOI: 10.1117/12.2177559  0.021
2015 Raddats C, Burton J, Ashman R. Resource configurations for services success in manufacturing companies Journal of Service Management. 26: 97-116. DOI: 10.1108/JOSM-12-2012-0278  0.02
2015 Wilkinson SN, Olley JM, Furuichi T, Burton J, Kinsey-Henderson AE. Sediment source tracing with stratified sampling and weightings based on spatial gradients in soil erosion Journal of Soils and Sediments. DOI: 10.1007/s11368-015-1134-2  0.019
2015 Olley J, Burton J, Hermoso V, Smolders K, Mcmahon J, Thomson B, Watkinson A. Remnant riparian vegetation, sediment and nutrient loads, and river rehabilitation in subtropical Australia Hydrological Processes. 29: 2290-2300. DOI: 10.1002/hyp.10369  0.019
2020 Zhang X, Muddana S, Kumar SR, Burton JN, Labroo P, Shea J, Stocking P, Siegl C, Archer B, Agarwal J, Ambati BK. Topical Pergolide Enhance Corneal Nerve Regrowth Following Induced Corneal Abrasion. Investigative Ophthalmology & Visual Science. 61: 4. PMID 31999819 DOI: 10.1167/Iovs.61.1.4  0.013
2015 Gajewska M, Paini A, Sala Benito JV, Burton J, Worth A, Urani C, Briesen H, Schramm KW. In vitro-to-in vivo correlation of the skin penetration, liver clearance and hepatotoxicity of caffeine Food and Chemical Toxicology. 75: 39-49. DOI: 10.1016/j.fct.2014.10.017  0.011
2019 Davis B, Hilgart D, Erickson S, Labroo P, Burton J, Sant H, Shea J, Gale B, Agarwal J. Local FK506 delivery at the direct nerve repair site improves nerve regeneration. Muscle & Nerve. PMID 31397908 DOI: 10.1002/Mus.26656  0.01
2015 Koritala T, Zolotarevsky E, Bartley AN, Ellis CD, Krolikowski JA, Burton J, Gunaratnam NT. Efficacy and safety of the band and slough technique for endoscopic therapy of nonampullary duodenal adenomas: a case series. Gastrointestinal Endoscopy. 81: 985-8. PMID 25440288 DOI: 10.1016/j.gie.2014.09.043  0.01
2015 Burton J. Ramie Targoff, Posthumous Love: Eros and the Afterlife in Renaissance England. Chicago and London: University of Chicago Press, 2014. xiii + 243 pp. $40.00. ISBN: 978-0226789590 (hb). Renaissance Studies. DOI: 10.1111/rest.12135  0.01
2015 Porter R, Batten L, Burton J, Collinson JM, Cowan P, Kennerley P, Kirwan GM, Newell RG, Pearson D, Riddington R, Salim M, Sheldon R, Scott D, Woodcock M. Rejoinder to the Response of Al-Sheikhly et al. Zoology in the Middle East. 61: 200. DOI: 10.1080/09397140.2015.1023426  0.01
2015 Porter R, Batten L, Burton J, Collinson JM, Cowan P, Kennerley P, Kirwan GM, Newell RG, Pearson D, Riddington R, Salim M, Sheldon R, Scott D, Woodcock M. Towards a better understanding of Basra Reed Warbler Acrocephalus griseldis (Aves: Passeriformes: Acrocephalidae) ecology? A comment on Al-Sheikhly et al. (2013) Zoology in the Middle East. 61: 190-192. DOI: 10.1080/09397140.2015.1023424  0.01
2011 Burton JN, El-Deiry MW. Use of ultrasonic shears in the harvest of the free osteocutaneous fibula flap. The Annals of Otology, Rhinology, and Laryngology. 120: 563-8. PMID 22032068  0.01
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