Maria Barna - Publications

Affiliations: 
Stanford University, Palo Alto, CA 

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Susanto TT, Hung V, Levine AG, Kerr CH, Yoo Y, Chen Y, Oses-Prieto JA, Fromm L, Fujii K, Wernig M, Burlingame AL, Ruggero D, Barna M. RAPIDASH: A tag-free enrichment of ribosome-associated proteins reveals compositional dynamics in embryonic tissues and stimulated macrophages. Biorxiv : the Preprint Server For Biology. PMID 38106052 DOI: 10.1101/2023.12.07.570613  0.307
2023 Xu AF, Molinuevo R, Fazzari E, Tom H, Zhang Z, Menendez J, Casey KM, Ruggero D, Hinck L, Pritchard JK, Barna M. Subfunctionalized expression drives evolutionary retention of ribosomal protein paralogs and in vertebrates. Elife. 12. PMID 37306301 DOI: 10.7554/eLife.78695  0.323
2022 Forester CM, Oses-Prieto JA, Phillips NJ, Miglani S, Pang X, Byeon GW, DeMarco R, Burlingame A, Barna M, Ruggero D. Regulation of eIF4E guides a unique translational program to control erythroid maturation. Science Advances. 8: eadd3942. PMID 36563140 DOI: 10.1126/sciadv.add3942  0.342
2022 Genuth NR, Shi Z, Kunimoto K, Hung V, Xu AF, Kerr CH, Tiu GC, Oses-Prieto JA, Salomon-Shulman REA, Axelrod JD, Burlingame AL, Loh KM, Barna M. A stem cell roadmap of ribosome heterogeneity reveals a function for RPL10A in mesoderm production. Nature Communications. 13: 5491. PMID 36123354 DOI: 10.1038/s41467-022-33263-3  0.305
2022 Leppek K, Byeon GW, Fujii K, Barna M. VELCRO-IP RNA-seq reveals ribosome expansion segment function in translation genome-wide. Cell Reports. 34: 108629. PMID 33472078 DOI: 10.1016/j.celrep.2020.108629  0.31
2021 Fujii K, Zhulyn O, Byeon GW, Genuth NR, Kerr CH, Walsh EM, Barna M. Controlling tissue patterning by translational regulation of signaling transcripts through the core translation factor eIF3c. Developmental Cell. 56: 2928-2937.e9. PMID 34752747 DOI: 10.1016/j.devcel.2021.10.009  0.34
2021 Tiu GC, Kerr CH, Forester CM, Krishnarao PS, Rosenblatt HD, Raj N, Lantz TC, Zhulyn O, Bowen ME, Shokat L, Attardi LD, Ruggero D, Barna M. A p53-dependent translational program directs tissue-selective phenotypes in a model of ribosomopathies. Developmental Cell. PMID 34242585 DOI: 10.1016/j.devcel.2021.06.013  0.308
2021 Byeon GW, Cenik ES, Jiang L, Tang H, Das R, Barna M. Functional and structural basis of extreme conservation in vertebrate 5' untranslated regions. Nature Genetics. PMID 33821006 DOI: 10.1038/s41588-021-00830-1  0.32
2019 Yamada SB, Gendron TF, Niccoli T, Genuth NR, Grosely R, Shi Y, Glaria I, Kramer NJ, Nakayama L, Fang S, Dinger TJI, Thoeng A, Rocha G, Barna M, Puglisi JD, et al. RPS25 is required for efficient RAN translation of C9orf72 and other neurodegenerative disease-associated nucleotide repeats. Nature Neuroscience. PMID 31358992 DOI: 10.1038/S41593-019-0455-7  0.332
2019 Leppek K, Barna M. An rRNA variant to deal with stress. Nature Microbiology. 4: 382-383. PMID 30787478 DOI: 10.1038/S41564-019-0396-7  0.305
2019 Xu Y, Poggio M, Jin HY, Shi Z, Forester CM, Wang Y, Stumpf CR, Xue L, Devericks E, So L, Nguyen HG, Griselin A, Gordan JD, Umetsu SE, Reich SH, ... ... Barna M, et al. Translation control of the immune checkpoint in cancer and its therapeutic targeting. Nature Medicine. PMID 30643286 DOI: 10.1038/S41591-018-0321-2  0.326
2019 Forester CM, Woo-Byeon G, Oses-Prieto J, Burlingame A, Barna M, Ruggero DM. Regulation of eIF4E Guides a Unique Translational Program to Steer Erythroid Maturation Blood. 134: 156-156. DOI: 10.1182/Blood-2019-129608  0.491
2018 Fujii K, Susanto TT, Saurabh S, Barna M. Decoding the Function of Expansion Segments in Ribosomes. Molecular Cell. 72: 1013-1020.e6. PMID 30576652 DOI: 10.1016/J.Molcel.2018.11.023  0.343
2018 Leppek K, Das R, Barna M. Author Correction: Functional 5' UTR mRNA structures in eukaryotic translation regulation and how to find them. Nature Reviews. Molecular Cell Biology. PMID 30111874 DOI: 10.1038/S41580-018-0055-5  0.343
2018 Genuth NR, Barna M. The Discovery of Ribosome Heterogeneity and Its Implications for Gene Regulation and Organismal Life. Molecular Cell. 71: 364-374. PMID 30075139 DOI: 10.1016/J.Molcel.2018.07.018  0.481
2018 Genuth NR, Barna M. Heterogeneity and specialized functions of translation machinery:from genes to organisms Nature Reviews Genetics. 19: 431-452. PMID 29725087 DOI: 10.1038/S41576-018-0008-Z  0.464
2017 Leppek K, Das R, Barna M. Functional 5' UTR mRNA structures in eukaryotic translation regulation and how to find them. Nature Reviews. Molecular Cell Biology. PMID 29165424 DOI: 10.1038/Nrm.2017.103  0.414
2017 Shi Z, Fujii K, Kovary KM, Genuth NR, Röst HL, Teruel MN, Barna M. Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide. Molecular Cell. PMID 28625553 DOI: 10.1016/J.Molcel.2017.05.021  0.473
2017 Simsek D, Tiu GC, Flynn RA, Byeon GW, Leppek K, Xu AF, Chang HY, Barna M. The Mammalian Ribo-interactome Reveals Ribosome Functional Diversity and Heterogeneity. Cell. 169: 1051-1065.e18. PMID 28575669 DOI: 10.1016/J.Cell.2017.05.022  0.393
2017 Simsek D, Barna M. An emerging role for the ribosome as a nexus for post-translational modifications Current Opinion in Cell Biology. 45: 92-101. PMID 28445788 DOI: 10.1016/J.Ceb.2017.02.010  0.439
2017 Fujii K, Shi Z, Zhulyn O, Denans N, Barna M. Pervasive translational regulation of the cell signalling circuitry underlies mammalian development. Nature Communications. 8: 14443. PMID 28195124 DOI: 10.1038/Ncomms14443  0.424
2016 Barna M. Specialized Ribosomes: A New Frontier in Gene Regulation, Organismal Biology, & Evolution Blood. 128. DOI: 10.1182/Blood.V128.22.Sci-41.Sci-41  0.481
2015 Shi Z, Barna M. Translating the Genome in Time and Space: Specialized Ribosomes, RNA Regulons, and RNA-Binding Proteins. Annual Review of Cell and Developmental Biology. PMID 26443190 DOI: 10.1146/Annurev-Cellbio-100814-125346  0.448
2015 Xue S, Barna M. Cis-regulatory RNA elements that regulate specialized ribosome activity. Rna Biology. 1-5. PMID 26327194 DOI: 10.1080/15476286.2015.1085149  0.466
2015 Truitt ML, Conn CS, Shi Z, Pang X, Tokuyasu T, Coady AM, Seo Y, Barna M, Ruggero D. Differential Requirements for eIF4E Dose in Normal Development and Cancer. Cell. 162: 59-71. PMID 26095252 DOI: 10.1016/J.Cell.2015.05.049  0.382
2015 Barna M. The ribosome prophecy Nature Reviews. Molecular Cell Biology. 16: 268. PMID 25907611 DOI: 10.1038/Nrm3993  0.329
2015 Xue S, Tian S, Fujii K, Kladwang W, Das R, Barna M. RNA regulons in Hox 5' UTRs confer ribosome specificity to gene regulation. Nature. 517: 33-8. PMID 25409156 DOI: 10.1038/Nature14010  0.471
2015 Forester CM, Shi Z, Barna M, Ruggero D. A Tailor-Made Protein Synthesis Program Drives Erythroid Development and Disease Blood. 126: 3581-3581. DOI: 10.1182/Blood.V126.23.3581.3581  0.429
2014 Fairchild CL, Barna M. Specialized filopodia: At the 'tip' of morphogen transport and vertebrate tissue patterning Current Opinion in Genetics and Development. 27: 67-73. PMID 24907447 DOI: 10.1016/J.Gde.2014.03.013  0.315
2014 Barna M, Ruggero D. Tailor made protein synthesis for HSCs Cell Stem Cell. 14: 423-424. PMID 24702992 DOI: 10.1016/J.Stem.2014.03.011  0.377
2013 Sanders TA, Llagostera E, Barna M. Specialized filopodia direct long-range transport of SHH during vertebrate tissue patterning Nature. 497: 628-632. PMID 23624372 DOI: 10.1038/Nature12157  0.328
2013 Barna M. Ribosomes take control Proceedings of the National Academy of Sciences of the United States of America. 110: 9-10. PMID 23243144 DOI: 10.1073/Pnas.1218764110  0.494
2012 Xue S, Barna M. Specialized ribosomes: A new frontier in gene regulation and organismal biology Nature Reviews Molecular Cell Biology. 13: 355-369. PMID 22617470 DOI: 10.1038/Nrm3359  0.491
2011 Kondrashov N, Pusic A, Stumpf CR, Shimizu K, Hsieh AC, Xue S, Ishijima J, Shiroishi T, Barna M. Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning. Cell. 145: 383-97. PMID 21529712 DOI: 10.1016/J.Cell.2011.03.028  0.476
2011 Kondrashov N, Pusic A, Stumpf C, Shimizu K, Hsieh A, Xue S, Ishijima J, Shiroishi T, Barna M. Specialized ribosomes control Hox mRNA translation and vertebrate tissue patterning Developmental Biology. 356: 102. DOI: 10.1016/J.Ydbio.2011.05.010  0.357
2008 Barna M, Pusic A, Zollo O, Costa M, Kondrashov N, Rego E, Rao PH, Ruggero D. Suppression of Myc oncogenic activity by ribosomal protein haploinsufficiency Nature. 456: 971-975. PMID 19011615 DOI: 10.1038/Nature07449  0.451
2007 Barna M, Niswander L. Visualization of cartilage formation: insight into cellular properties of skeletal progenitors and chondrodysplasia syndromes. Developmental Cell. 12: 931-41. PMID 17543865 DOI: 10.1016/J.Devcel.2007.04.016  0.314
2005 Barna M, Pandolfi PP, Niswander L. Gli3 and Plzf cooperate in proximal limb patterning at early stages of limb development. Nature. 436: 277-81. PMID 16015334 DOI: 10.1038/Nature03801  0.302
2004 Costoya JA, Hobbs RM, Barna M, Cattoretti G, Manova K, Sukhwani M, Orwig KE, Wolgemuth DJ, Pandolfi PP. Essential role of Plzf in maintenance of spermatogonial stem cells. Nature Genetics. 36: 653-9. PMID 15156143 DOI: 10.1038/Ng1367  0.348
2002 Barna M, Merghoub T, Costoya JA, Ruggero D, Branford M, Bergia A, Samori B, Pandolfi PP. Plzf mediates transcriptional repression of HoxD gene expression through chromatin remodeling. Developmental Cell. 3: 499-510. PMID 12408802 DOI: 10.1016/S1534-5807(02)00289-7  0.363
2000 Barna M, Hawe N, Niswander L, Pandolfi PP. Plzf regulates limb and axial skeletal patterning. Nature Genetics. 25: 166-72. PMID 10835630 DOI: 10.1038/76014  0.366
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