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David E. Pettijohn - Publications

Affiliations: 
University of Colorado, Boulder, Boulder, CO, United States 
 1964 Biophysics Stanford University, Palo Alto, CA 
Area:
DNA Damage, radiotherapy, microbiology, biophysics
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41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
1996 PETTIJOHN D, HANAWALT P. EVIDENCE FOR REPAIR-REPLICATION OF ULTRAVIOLET DAMAGED DNA IN BACTERIA. Journal of Molecular Biology. 9: 395-410. PMID 14202275 DOI: 10.1016/S0022-2836(64)80216-3  0.587
1995 Wagner JP, Quill DM, Pettijohn DE. Increased DNA-bending activity and higher affinity DNA binding of high mobility group protein HMG-1 prepared without acids. The Journal of Biological Chemistry. 270: 7394-8. PMID 7706284 DOI: 10.1074/jbc.270.13.7394  0.403
1995 Cann JR, Pfenninger O, Pettijohn DE. Theory of the mobility-shift assay of nonspecific protein-DNA complexes governed by conditional probabilities: the HU:DNA complex. Electrophoresis. 16: 881-7. PMID 7498130 DOI: 10.1002/Elps.11501601148  0.345
1994 Oñate SA, Prendergast P, Wagner JP, Nissen M, Reeves R, Pettijohn DE, Edwards DP. The DNA-bending protein HMG-1 enhances progesterone receptor binding to its target DNA sequences. Molecular and Cellular Biology. 14: 3376-91. PMID 8164686 DOI: 10.1128/Mcb.14.5.3376  0.326
1989 Hodges-Garcia Y, Hagerman PJ, Pettijohn DE. DNA ring closure mediated by protein HU Journal of Biological Chemistry. 264: 14621-14623. PMID 2768236  0.449
1988 Winston S, Pettijohn DE. Relaxation of DNA torsional tension in defined domains of bacterial chromosomes in vivo. Canadian Journal of Microbiology. 34: 522-5. PMID 3141032 DOI: 10.1139/m88-089  0.357
1986 Broyles SS, Pettijohn DE. Interaction of the Escherichia coli HU protein with DNA. Evidence for formation of nucleosome-like structures with altered DNA helical pitch Journal of Molecular Biology. 187: 47-60. PMID 3514923 DOI: 10.1016/0022-2836(86)90405-5  0.455
1983 Sinden RR, Broyles SS, Pettijohn DE. Perfect palindromic lac operator DNA sequence exists as a stable cruciform structure in supercoiled DNA in vitro but not in vivo Proceedings of the National Academy of Sciences of the United States of America. 80: 1797-1801. PMID 6340109  0.408
1982 Sinden RR, Pettijohn DE. Torsional tension in intracellular bacteriophage T4 DNA. Evidence that a linear DNA duplex can be supercoiled in vivo. Journal of Molecular Biology. 162: 659-77. PMID 6762444 DOI: 10.1016/0022-2836(82)90394-1  0.407
1982 Sinden RR, Pettijohn DE, Francke B. Organization of herpes simplex virus type 1 deoxyribonucleic acid during replication probed in living cells with 4,5',8-trimethylpsoralen. Biochemistry. 21: 4484-90. PMID 6289885 DOI: 10.1021/bi00261a045  0.43
1982 Carlson JO, Pfenninger O, Sinden RR, Lehman JM, Pettijohn DE. New procedure using a psoralen derivative for analysis of nucleosome associated DNA sequences in chromatin of living cells. Nucleic Acids Research. 10: 2043-63. PMID 6281729 DOI: 10.1093/nar/10.6.2043  0.31
1981 Sinden RR, Pettijohn DE. Chromosomes in living Escherichia coli cells are segregated into domains of supercoiling. Proceedings of the National Academy of Sciences of the United States of America. 78: 224-8. PMID 6165987 DOI: 10.1073/pnas.78.1.224  0.425
1980 Sinden RR, Carlson JO, Pettijohn DE. Torsional tension in the DNA double helix measured with trimethylpsoralen in living E. coli cells: analogous measurements in insect and human cells. Cell. 21: 773-83. PMID 6254668 DOI: 10.1016/0092-8674(80)90440-7  0.461
1980 Pettijohn DE, Pfenninger O. Supercoils in prokaryotic DNA restrained in vivo. Proceedings of the National Academy of Sciences of the United States of America. 77: 1331-5. PMID 6246488 DOI: 10.1073/pnas.77.3.1331  0.42
1979 Van Ness J, Pettijohn DE. A simple autoradiographic method for investigating long range chromosome substructure: size and number of DNA molecules in isolated nucleoids of Escherichia coli. Journal of Molecular Biology. 129: 501-8. PMID 379353 DOI: 10.1016/0022-2836(79)90509-6  0.506
1979 Carlson JO, Pettijohn DE. Lengths of transcriptional units coding for the heat shock proteins in Drosophila melanogaster. Journal of Molecular Biology. 132: 141-61. PMID 119864 DOI: 10.1016/0022-2836(79)90388-7  0.344
1978 Pettijohn D, Hecht RM, Stimpson D, van Scoyk S. An explanation for rotor speed effects observed during sedimentation of large folded DNA molecules. Journal of Molecular Biology. 119: 353-9. PMID 633373 DOI: 10.1016/0022-2836(78)90441-2  0.406
1977 Lydersen BK, Pettijohn DE. Interactions stabilizing DNA tertiary structure in the Escherichia coli chromosome investigated with ionizing radiation. Chromosoma. 62: 199-215. PMID 328241 DOI: 10.1007/Bf00286044  0.546
1977 Hahn WE, Pettijohn DE, Van Ness J. One strand equivalent of the Escherichia coli genome is transcribed: complexity and abundance classes of mRNA. Science (New York, N.Y.). 197: 582-5. PMID 327551 DOI: 10.1126/Science.327551  0.432
1977 Hecht RM, Stimpson D, Pettijohn D. Sedimentation properties of the bacterial chromosome as an isolated nucleoid and as an unfolded DNA fiber. Chromosomal DNA folding measured by rotor speed effects. Journal of Molecular Biology. 111: 257-77. PMID 325212 DOI: 10.1016/S0022-2836(77)80051-X  0.574
1976 Pettijohn DE. Prokaryotic DNA in nucleoid structure. Crc Critical Reviews in Biochemistry. 4: 175-202. PMID 827418 DOI: 10.3109/10409237609105458  0.324
1976 Hamilton S, Pettijohn DE. Properties of condensed bacteriophage T4 DNA isolated from Escherichia coli infected with bacteriophage T4. Journal of Virology. 19: 1012-27. PMID 787557 DOI: 10.1128/JVI.19.3.1012-1027.1976  0.468
1976 Hecht RM, Pettijohn DE. Studies of DNA bound RNA molecules isolated from nucleoids of Escherichia coli. Nucleic Acids Research. 3: 767-88. PMID 775442 DOI: 10.1093/Nar/3.3.767  0.538
1975 Flink I, Pettijohn DE. Polyamines stabilise DNA folds. Nature. 253: 62-3. PMID 1110753 DOI: 10.1038/253062A0  0.549
1975 Giorno R, Hecht RM, Pettijohn D. Analysis by isopycnic centrifugation of isolated nucleoids of Escherichia coli. Nucleic Acids Research. 2: 1559-1568. PMID 1101227 DOI: 10.1093/Nar/2.9.1559  0.383
1975 Giorno R, Stamato T, Lydersen B, Pettijohn D. Transcription in vitro of DNA in isolated bacterial nucleoids. Journal of Molecular Biology. 96: 217-237. PMID 1100843 DOI: 10.1016/0022-2836(75)90344-7  0.524
1975 Hecht RM, Taggart RT, Pettijohn DE. Size and DNA content of purified E. coli nucleoids observed by fluorescence microscopy Nature. 253: 60-62. PMID 1089200 DOI: 10.1038/253060A0  0.509
1974 Pettijohn DE, Hecht R. RNA molecules bound to the folded bacterial genome stabilize DNA folds and segregate domains of supercoiling. Cold Spring Harbor Symposia On Quantitative Biology. 38: 31-41. PMID 4598638 DOI: 10.1101/Sqb.1974.038.01.006  0.479
1972 Pettijohn DE. Ordered and preferential initiation of ribosomal RNA synthesis in vitro. Nature: New Biology. 235: 204-6. PMID 4551900 DOI: 10.1038/Newbio235204A0  0.383
1971 Stamato TD, Pettijohn DE. Regulation of ribosomal RNA synthesis in stringent bacteria. Nature: New Biology. 234: 99-102. PMID 4943521 DOI: 10.1038/Newbio234099A0  0.468
1971 Kossman CR, Stamato TD, Pettijohn DE. Tandem synthesis of the 16S and 23S ribosomal RNA sequences of Escherichia coli. Nature: New Biology. 234: 102-4. PMID 4943519 DOI: 10.1038/Newbio234102A0  0.386
1971 Stonington OG, Pettijohn DE. The folded genome of Escherichia coli isolated in a protein-DNA-RNA complex. Proceedings of the National Academy of Sciences of the United States of America. 68: 6-9. PMID 4924971 DOI: 10.1073/pnas.68.1.6  0.493
1970 Pettijohn DE, Clarkson K, Kossman CR, Stonington OG. Synthesis of ribosomal RNA on a protein-DNA complex isolated from bacteria: a comparison of ribosomal RNA synthesis in vitro and in vivo. Journal of Molecular Biology. 52: 281-300. PMID 4991980 DOI: 10.1016/0022-2836(70)90031-8  0.55
1970 Pettijohn DE, Stonington OG, Kossman CR. Chain termination of ribosomal RNA synthesis in vitro. Nature. 228: 235-9. PMID 4920919 DOI: 10.1038/228235A0  0.38
1969 Pettijohn DE. Transcription on an RNA polymerase-DNA complex from E. coli: evidence for in vitro synthesis of ribosomal RNA. Biochemical and Biophysical Research Communications. 34: 541-7. PMID 4888871 DOI: 10.1016/0006-291x(69)90416-1  0.422
1968 Hanawalt PC, Pettijohn DE, Pauling EC, Brunk CF, Smith DW, Kanner LC, Couch JL. Repair replication of DNA in vivo. Cold Spring Harbor Symposia On Quantitative Biology. 33: 187-94. PMID 4891962 DOI: 10.1101/Sqb.1968.033.01.022  0.555
1968 Pettijohn D. A study o DNA, partially denatured DNA and protein-DNA complexes in the polyethyleneglycol-dextran phase system. European Journal of Biochemistry. 3: 25-32. PMID 4295050 DOI: 10.1111/J.1432-1033.1967.TB19495.X  0.41
1967 Favre J, Pettijohn DE. A method for extracting purified DNA or protein-DNA complex from escherichia coli. European Journal of Biochemistry. 3: 33-41. PMID 4865565 DOI: 10.1111/j.1432-1033.1967.tb19496.x  0.412
1967 Pettijohn D, Kamiya T. Interaction of RNA polymerase with polyoma DNA Journal of Molecular Biology. 29: 275-295. DOI: 10.1016/0022-2836(67)90216-1  0.467
1964 Pettijohn DE, Hanawalt PC. Isolation of partially density-labeled DNA molecules from bacteria Journal of Molecular Biology. 8: 170-174. DOI: 10.1016/S0022-2836(64)80158-3  0.536
1963 PETTIJOHN DE, HANAWALT PC. Deoxyribonucleic acid replication in bacteria following ultraviolet irradiation. Biochimica Et Biophysica Acta. 72: 127-9. PMID 13942980 DOI: 10.1016/0926-6550(63)90324-4  0.414
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