Xiangqin Cui - Publications

Affiliations: 
Biostatistics University of Alabama, Birmingham, Birmingham, AL, United States 
Area:
Biostatistics Biology

38/106 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kim S, Park HJ, Cui X, Zhi D. Collective effects of long-range DNA methylations predict gene expressions and estimate phenotypes in cancer. Scientific Reports. 10: 3920. PMID 32127627 DOI: 10.1038/S41598-020-60845-2  0.303
2017 Peng Y, Yan S, Chen D, Cui X, Jiao K. Pdgfrb is a direct regulatory target of TGFβ signaling in atrioventricular cushion mesenchymal cells. Plos One. 12: e0175791. PMID 28426709 DOI: 10.1371/Journal.Pone.0175791  0.359
2015 Yang C, Bartolucci AA, Cui X. Multigroup Equivalence Analysis for High-Dimensional Expression Data. Cancer Informatics. 14: 253-263. PMID 26628859 DOI: 10.4137/Cin.S17304  0.322
2015 Mrug M, Zhou J, Yang C, Aronow BJ, Cui X, Schoeb TR, Siegal GP, Yoder BK, Guay-Woodford LM. Genetic and Informatic Analyses Implicate Kif12 as a Candidate Gene within the Mpkd2 Locus That Modulates Renal Cystic Disease Severity in the Cys1cpk Mouse. Plos One. 10: e0135678. PMID 26295839 DOI: 10.1371/Journal.Pone.0135678  0.347
2015 Plyler ZE, Hill AE, McAtee CW, Cui X, Moseley LA, Sorscher EJ. SNP Formation Bias in the Murine Genome Provides Evidence for Parallel Evolution. Genome Biology and Evolution. PMID 26253317 DOI: 10.1093/Gbe/Evv150  0.312
2015 Cui X, Yu S, Tamhane A, Causey ZL, Steg A, Danila MI, Reynolds RJ, Wang J, Wanzeck KC, Tang Q, Ledbetter SS, Redden DT, Johnson MR, Bridges SL. Simple regression for correcting ΔCt bias in RT-qPCR low-density array data normalization. Bmc Genomics. 16: 82. PMID 25888492 DOI: 10.1186/S12864-015-1274-1  0.397
2015 Cuna A, Halloran B, Faye-Petersen O, Kelly D, Crossman DK, Cui X, Pandit K, Kaminski N, Bhattacharya S, Ahmad A, Mariani TJ, Ambalavanan N. Alterations in Gene Expression and DNA Methylation during Murine and Human Lung Alveolar Septation. American Journal of Respiratory Cell and Molecular Biology. 53: 60-73. PMID 25387348 DOI: 10.1542/Peds.137.Supplement_3.434A  0.359
2014 Boddu R, Yang C, O'Connor AK, Hendrickson RC, Boone B, Cui X, Garcia-Gonzalez M, Igarashi P, Onuchic LF, Germino GG, Guay-Woodford LM. Intragenic motifs regulate the transcriptional complexity of Pkhd1/PKHD1. Journal of Molecular Medicine (Berlin, Germany). 92: 1045-56. PMID 24984783 DOI: 10.1007/S00109-014-1185-7  0.358
2014 Qiu J, Qi Y, Cui X. Applying shrinkage variance estimators to the TOST test in high dimensional settings. Statistical Applications in Genetics and Molecular Biology. 13: 323-41. PMID 24864302 DOI: 10.1515/Sagmb-2013-0045  0.394
2014 Yan Q, Tiwari HK, Yi N, Lin WY, Gao G, Lou XY, Cui X, Liu N. Kernel-machine testing coupled with a rank-truncation method for genetic pathway analysis. Genetic Epidemiology. 38: 447-56. PMID 24849109 DOI: 10.1002/Gepi.21813  0.339
2013 Thalacker-Mercer A, Stec M, Cui X, Cross J, Windham S, Bamman M. Cluster analysis reveals differential transcript profiles associated with resistance training-induced human skeletal muscle hypertrophy Physiological Genomics. 45: 499-507. PMID 23632419 DOI: 10.1152/Physiolgenomics.00167.2012  0.332
2013 Reynolds RJ, Cui X, Vaughan LK, Redden DT, Causey Z, Perkins E, Shah T, Hughes LB, Damle A, Kern M, Gregersen PK, Johnson MR, Bridges SL. Gene expression patterns in peripheral blood cells associated with radiographic severity in African Americans with early rheumatoid arthritis. Rheumatology International. 33: 129-37. PMID 22238028 DOI: 10.1007/S00296-011-2355-3  0.337
2012 Tan CK, Carey AJ, Cui X, Webb RI, Ipe D, Crowley M, Cripps AW, Benjamin WH, Ulett KB, Schembri MA, Ulett GC. Genome-wide mapping of cystitis due to Streptococcus agalactiae and Escherichia coli in mice identifies a unique bladder transcriptome that signifies pathogen-specific antimicrobial defense against urinary tract infection. Infection and Immunity. 80: 3145-60. PMID 22733575 DOI: 10.1128/Iai.00023-12  0.366
2012 Fang Z, Du R, Cui X. Uniform approximation is more appropriate for Wilcoxon Rank-Sum Test in gene set analysis. Plos One. 7: e31505. PMID 22347488 DOI: 10.1371/Journal.Pone.0031505  0.454
2012 Duarte CW, Willey CD, Zhi D, Cui X, Harris JJ, Vaughan LK, Mehta T, McCubrey RO, Khodarev NN, Weichselbaum RR, Gillespie GY. Expression signature of IFN/STAT1 signaling genes predicts poor survival outcome in glioblastoma multiforme in a subtype-specific manner. Plos One. 7: e29653. PMID 22242177 DOI: 10.1371/Journal.Pone.0029653  0.396
2012 Duell BL, Carey AJ, Tan CK, Cui X, Webb RI, Totsika M, Schembri MA, Derrington P, Irving-Rodgers H, Brooks AJ, Cripps AW, Crowley M, Ulett GC. Innate transcriptional networks activated in bladder in response to uropathogenic Escherichia coli drive diverse biological pathways and rapid synthesis of IL-10 for defense against bacterial urinary tract infection. Journal of Immunology (Baltimore, Md. : 1950). 188: 781-92. PMID 22184725 DOI: 10.4049/Jimmunol.1101231  0.309
2011 Fang Z, Cui X. Design and validation issues in RNA-seq experiments. Briefings in Bioinformatics. 12: 280-7. PMID 21498551 DOI: 10.1093/Bib/Bbr004  0.311
2011 Chen YW, Pat B, Gladden JD, Zheng J, Powell P, Wei CC, Cui X, Husain A, Dell'italia LJ. Dynamic molecular and histopathological changes in the extracellular matrix and inflammation in the transition to heart failure in isolated volume overload. American Journal of Physiology. Heart and Circulatory Physiology. 300: H2251-60. PMID 21421827 DOI: 10.1152/Ajpheart.01104.2010  0.338
2011 Gao L, Fang Z, Zhang K, Zhi D, Cui X. Length bias correction for RNA-seq data in gene set analyses. Bioinformatics (Oxford, England). 27: 662-9. PMID 21252076 DOI: 10.1093/Bioinformatics/Btr005  0.407
2011 Wu X, Patki A, Lara-Castro C, Cui X, Zhang K, Walton RG, Osier MV, Gadbury GL, Allison DB, Martin M, Garvey WT. Genes and biochemical pathways in human skeletal muscle affecting resting energy expenditure and fuel partitioning. Journal of Applied Physiology (Bethesda, Md. : 1985). 110: 746-55. PMID 21109598 DOI: 10.1152/Japplphysiol.00293.2010  0.428
2010 Qiu J, Cui X. Evaluation of a statistical equivalence test applied to microarray data. Journal of Biopharmaceutical Statistics. 20: 240-66. PMID 20309757 DOI: 10.1080/10543400903572738  0.444
2009 Zhu H, Li GJ, Ding L, Cui X, Berg H, Assmann SM, Xia Y. Arabidopsis extra large G-protein 2 (XLG2) interacts with the Gbeta subunit of heterotrimeric G protein and functions in disease resistance. Molecular Plant. 2: 513-25. PMID 19825634 DOI: 10.1093/Mp/Ssp001  0.623
2009 Ioannidis JP, Allison DB, Ball CA, Coulibaly I, Cui X, Culhane AC, Falchi M, Furlanello C, Game L, Jurman G, Mangion J, Mehta T, Nitzberg M, Page GP, Petretto E, et al. Repeatability of published microarray gene expression analyses. Nature Genetics. 41: 149-55. PMID 19174838 DOI: 10.1038/Ng.295  0.368
2009 Cui X, Loraine AE. Consistency analysis of redundant probe sets on affymetrix three-prime expression arrays and applications to differential mRNA processing. Plos One. 4: e4229. PMID 19165320 DOI: 10.1371/Journal.Pone.0004229  0.346
2008 Mrug M, Zhou J, Woo Y, Cui X, Szalai AJ, Novak J, Churchill GA, Guay-Woodford LM. Overexpression of innate immune response genes in a model of recessive polycystic kidney disease Kidney International. 73: 63-76. PMID 17960140 DOI: 10.1038/Sj.Ki.5002627  0.328
2008 Mrug M, Zhou J, Woo Y, Cui X, Szalai AJ, Novak J, Churchill GA, Guay-Woodford LM. Response to 'Overexpression of complement-component genes in Han:SPRD rats a model of polycystic kidney disease' Kidney International. 73: 1325. DOI: 10.1038/Ki.2008.52  0.375
2007 Wu X, Wang J, Cui X, Maianu L, Rhees B, Rosinski J, So WV, Willi SM, Osier MV, Hill HS, Page GP, Allison DB, Martin M, Garvey WT. The effect of insulin on expression of genes and biochemical pathways in human skeletal muscle. Endocrine. 31: 5-17. PMID 17709892 DOI: 10.1007/S12020-007-0007-X  0.319
2006 Laudencia-Chingcuanco DL, Stamova BS, Lazo GR, Cui X, Anderson OD. Analysis of the wheat endosperm transcriptome. Journal of Applied Genetics. 47: 287-302. PMID 17132893 DOI: 10.1007/Bf03194638  0.453
2006 Cui X, Affourtit J, Shockley KR, Woo Y, Churchill GA. Inheritance patterns of transcript levels in F1 hybrid mice Genetics. 174: 627-637. PMID 16888332 DOI: 10.1534/Genetics.106.060251  0.349
2006 Allison DB, Cui X, Page GP, Sabripour M. Microarray data analysis: from disarray to consolidation and consensus. Nature Reviews. Genetics. 7: 55-65. PMID 16369572 DOI: 10.1038/Nrg1749  0.326
2005 Yao H, Guo L, Fu Y, Borsuk LA, Wen TJ, Skibbe DS, Cui X, Scheffler BE, Cao J, Emrich SJ, Ashlock DA, Schnable PS. Evaluation of five ab initio gene prediction programs for the discovery of maize genes. Plant Molecular Biology. 57: 445-60. PMID 15830133 DOI: 10.1007/S11103-005-0271-1  0.602
2005 Mrug M, Li R, Cui X, Schoeb TR, Churchill GA, Guay-Woodford LM. Kinesin family member 12 is a candidate polycystic kidney disease modifier in the cpk mouse. Journal of the American Society of Nephrology : Jasn. 16: 905-16. PMID 15728779 DOI: 10.1681/Asn.2004121083  0.349
2005 Cui X, Hwang JT, Qiu J, Blades NJ, Churchill GA. Improved statistical tests for differential gene expression by shrinking variance components estimates. Biostatistics (Oxford, England). 6: 59-75. PMID 15618528 DOI: 10.1093/Biostatistics/Kxh018  0.379
2004 Lobenhofer EK, Cui X, Bennett L, Cable PL, Merrick BA, Churchill GA, Afshari CA. Exploration of low-dose estrogen effects: Identification of No Observed Transcriptional Effect Level (NOTEL) Toxicologic Pathology. 32: 482-492. PMID 15223774 DOI: 10.1080/01926230490483324  0.34
2003 Cui X, Hsia AP, Liu F, Ashlock DA, Wise RP, Schnable PS. Alternative transcription initiation sites and polyadenylation sites are recruited during Mu suppression at the rf2a locus of maize. Genetics. 163: 685-98. PMID 12618406  0.704
2002 Skibbe DS, Liu F, Wen TJ, Yandeau MD, Cui X, Cao J, Simmons CR, Schnable PS. Characterization of the aldehyde dehydrogenase gene families of Zea mays and Arabidopsis. Plant Molecular Biology. 48: 751-64. PMID 11999848 DOI: 10.1023/A:1014870429630  0.681
2001 Liu F, Cui X, Horner HT, Weiner H, Schnable PS. Mitochondrial aldehyde dehydrogenase activity is required for male fertility in maize. The Plant Cell. 13: 1063-78. PMID 11340182 DOI: 10.1105/Tpc.13.5.1063  0.635
1996 Cui X, Wise RP, Schnable PS. The rf2 nuclear restorer gene of male-sterile T-cytoplasm maize. Science (New York, N.Y.). 272: 1334-6. PMID 8650543 DOI: 10.1126/Science.272.5266.1334  0.594
Low-probability matches (unlikely to be authored by this person)
2009 Cui X, Zhou J, Qiu J, Johnson MR, Mrug M. Validation of endogenous internal real-time PCR controls in renal tissues. American Journal of Nephrology. 30: 413-7. PMID 19729889 DOI: 10.1159/000235993  0.295
2016 Barnes S, Benton HP, Casazza K, Cooper SJ, Cui X, Du X, Engler J, Kabarowski JH, Li S, Pathmasiri W, Prasain JK, Renfrow MB, Tiwari HK. Training in metabolomics research. I. Designing the experiment, collecting and extracting samples and generating metabolomics data. Journal of Mass Spectrometry : Jms. 51: 461-475. PMID 27434804 DOI: 10.1002/Jms.3782  0.295
2003 Cui X, Churchill GA. Statistical tests for differential expression in cDNA microarray experiments Genome Biology. 4. PMID 12702200 DOI: 10.1186/Gb-2003-4-4-210  0.288
2015 Tang Q, Danila MI, Cui X, Parks L, Baker BJ, Reynolds RJ, Raman C, Wanseck KC, Redden DT, Johnson MR, Bridges SL. Expression of Interferon-γ Receptor Genes in Peripheral Blood Mononuclear Cells Is Associated With Rheumatoid Arthritis and Its Radiographic Severity in African Americans. Arthritis & Rheumatology (Hoboken, N.J.). 67: 1165-70. PMID 25708927 DOI: 10.1002/Art.39056  0.286
2007 Ye J, Cui X, Loraine A, Bynum K, Kim NC, White G, Luca MD, Garfinkel MD, Lu X, Ruden DM. Methods for nutrigenomics and longevity studies in Drosophila effects of diets high in sucrose, palmitic acid, soy, or beef Methods of Molecular Biology. 371: 111-141. DOI: 10.1385/1-59745-361-7:111  0.279
2019 Zhong H, Kim S, Zhi D, Cui X. Predicting gene expression using DNA methylation in three human populations. Peerj. 7: e6757. PMID 31106051 DOI: 10.7717/Peerj.6757  0.273
2016 Barnes S, Benton HP, Casazza K, Cooper SJ, Cui X, Du X, Engler JA, Kabarowski JH, Li S, Pathmasiri W, Prasain JK, Renfrow MB, Tiwari HK. Training in metabolomics research. I. Designing the experiment, collecting and extracting samples and generating metabolomics data. Journal of Mass Spectrometry : Jms. 51: ii-iii. PMID 27434812 DOI: 10.1002/Jms.3672  0.272
2017 Zhang X, Mallick H, Tang Z, Zhang L, Cui X, Benson AK, Yi N. Negative binomial mixed models for analyzing microbiome count data. Bmc Bioinformatics. 18: 4. PMID 28049409 DOI: 10.1186/S12859-016-1441-7  0.269
2010 Thalacker-Mercer AE, Dell'Italia LJ, Cui X, Cross JM, Bamman MM. Differential genomic responses in old vs. young humans despite similar levels of modest muscle damage after resistance loading. Physiological Genomics. 40: 141-9. PMID 19903761 DOI: 10.1152/Physiolgenomics.00151.2009  0.264
2015 Wang Y, Kapoor P, Parks R, Silva-Sanchez A, Alam SM, Verkoczy L, Liao HX, Zhuang Y, Burrows P, Levinson M, Elgavish A, Cui X, Haynes BF, Schroeder H. HIV-1 gp140 epitope recognition is influenced by immunoglobulin DH gene segment sequence. Immunogenetics. PMID 26687685 DOI: 10.1007/S00251-015-0890-X  0.264
2009 Chen L, Page GP, Mehta T, Feng R, Cui X. Single nucleotide polymorphisms affect both cis- and trans-eQTLs. Genomics. 93: 501-8. PMID 19248827 DOI: 10.1016/J.Ygeno.2009.01.011  0.263
2016 Barnes S, Benton HP, Casazza K, Cooper SJ, Cui X, Du X, Engler J, Kabarowski JH, Li S, Pathmasiri W, Prasain JK, Renfrow MB, Tiwari HK. Training in metabolomics research. II. Processing and statistical analysis of metabolomics data, metabolite identification, pathway analysis, applications of metabolomics and its future. Journal of Mass Spectrometry : Jms. 51: 535-548. PMID 28239968 DOI: 10.1002/Jms.3780  0.26
2014 Rojnueangnit K, Mikhail FM, Cui X, Yu S, Robin NH. Predictor(s) of Abnormal Array Comparative Genomic Hybridization Results in Patients With Cleft Lip and/or Palate. The Cleft Palate-Craniofacial Journal : Official Publication of the American Cleft Palate-Craniofacial Association. PMID 25489768 DOI: 10.1597/14-088  0.255
2003 Cui X, Kerr MK, Churchill GA. Transformations for cDNA microarray data. Statistical Applications in Genetics and Molecular Biology. 2: Article4. PMID 16646782 DOI: 10.2202/1544-6115.1009  0.254
2007 Gao Y, Guo S, Yin Q, Cui X, Hisamitsu T, Jiang X. Possible involvement of integrin signaling pathway in the process of recovery from restraint stress in rats. Neuroscience Bulletin. 23: 229-235. PMID 17687398 DOI: 10.1007/S12264-007-0034-X  0.252
2014 Yang S, Cui X, Fang Z. BCRgt: a Bayesian cluster regression-based genotyping algorithm for the samples with copy number alterations. Bmc Bioinformatics. 15: 74. PMID 24629125 DOI: 10.1186/1471-2105-15-74  0.25
2012 Zhou J, Ouyang X, Schoeb TR, Bolisetty S, Cui X, Mrug S, Yoder BK, Johnson MR, Szalai AJ, Mrug M. Kidney injury accelerates cystogenesis via pathways modulated by heme oxygenase and complement. Journal of the American Society of Nephrology : Jasn. 23: 1161-71. PMID 22518005 DOI: 10.1681/Asn.2011050442  0.249
2014 Peng Y, Song L, Zhao M, Harmelink C, Debenedittis P, Cui X, Wang Q, Jiao K. Critical roles of miRNA-mediated regulation of TGFβ signalling during mouse cardiogenesis. Cardiovascular Research. 103: 258-67. PMID 24835278 DOI: 10.1093/Cvr/Cvu126  0.249
2012 Wu H, Wu MC, Zhi D, Santorico SA, Cui X. Statistics for next generation sequencing - meeting report. Frontiers in Genetics. 3: 128. PMID 22811695 DOI: 10.3389/Fgene.2012.00128  0.247
2015 Yan Q, Tiwari HK, Yi N, Gao G, Zhang K, Lin WY, Lou XY, Cui X, Liu N. A Sequence Kernel Association Test for Dichotomous Traits in Family Samples under a Generalized Linear Mixed Model. Human Heredity. 79: 60-8. PMID 25791389 DOI: 10.1159/000375409  0.245
2007 Brand JP, Chen L, Cui X, Bartolucci AA, Page GP, Kim K, Barnes S, Srinivasasainagendra V, Beasley MT, Allison DB. An adaptive alpha spending algorithm improves the power of statistical inference in microarray data analysis. Bioinformation. 1: 384-9. PMID 17597927 DOI: 10.6026/97320630001384  0.241
2018 Carson TL, Wang F, Cui X, Jackson BE, Pol LVD, Lefkowitz EJ, Morrow C, Baskin M. Abstract A59: Racial comparisons of the gut microbiota of generally healthy black and white women for insights into colorectal cancer disparities Cancer Epidemiology, Biomarkers & Prevention. 27. DOI: 10.1158/1538-7755.Disp17-A59  0.237
2014 Barnes J, Pat B, Chen YW, Powell PC, Bradley WE, Zheng J, Karki A, Cui X, Guichard J, Wei CC, Collawn J, Dell'Italia LJ. Whole-genome profiling highlights the molecular complexity underlying eccentric cardiac hypertrophy. Therapeutic Advances in Cardiovascular Disease. 8: 97-118. PMID 24692245 DOI: 10.1177/1753944714527490  0.236
2018 Hartman H, Wang Y, Schroeder HW, Cui X. Absorbance summation: A novel approach for analyzing high-throughput ELISA data in the absence of a standard. Plos One. 13: e0198528. PMID 29883460 DOI: 10.1371/Journal.Pone.0198528  0.235
2006 Cui X, Loraine A. Global correlation analysis between redundant probe sets using a large collection of Arabidopsis ath1 expression profiling data Computational Systems Bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference. 223-226. PMID 17369640  0.234
2010 Zhou J, Ouyang X, Cui X, Schoeb TR, Smythies LE, Johnson MR, Guay-Woodford LM, Chapman AB, Mrug M. Renal CD14 expression correlates with the progression of cystic kidney disease. Kidney International. 78: 550-60. PMID 20555320 DOI: 10.1038/Ki.2010.175  0.234
2017 Romano SN, Edwards HE, Souder JP, Ryan KJ, Cui X, Gorelick DA. G protein-coupled estrogen receptor regulates embryonic heart rate in zebrafish. Plos Genetics. 13: e1007069. PMID 29065151 DOI: 10.1371/Journal.Pgen.1007069  0.23
2018 Atkinson TP, Centor RM, Xiao L, Wang F, Cui X, Van Der Pol W, Morrow CD, Ratliff AE, Crabb DM, Totten AH, Estrada CA, Faircloth MB, Waites KB. Analysis of the tonsillar microbiome in young adults with sore throat reveals a high relative abundance of Fusobacterium necrophorum with low diversity. Plos One. 13: e0189423. PMID 29351278 DOI: 10.1371/Journal.Pone.0189423  0.23
2006 Allison DB, Cui X, Page GP, Sabripour M. Erratum: Microarray data analysis: from disarray to consolidation and consensus Nature Reviews Genetics. 7: 406-406. DOI: 10.1038/Nrg1869  0.22
2010 Ulett GC, Webb RI, Ulett KB, Cui X, Benjamin WH, Crowley M, Schembri MA. Group B Streptococcus (GBS) urinary tract infection involves binding of GBS to bladder uroepithelium and potent but GBS-specific induction of interleukin 1alpha. The Journal of Infectious Diseases. 201: 866-70. PMID 20132033 DOI: 10.1086/650696  0.218
2014 Stoll ML, Kumar R, Morrow CD, Lefkowitz EJ, Cui X, Genin A, Cron RQ, Elson CO. Altered microbiota associated with abnormal humoral immune responses to commensal organisms in enthesitis-related arthritis. Arthritis Research & Therapy. 16: 486. PMID 25434931 DOI: 10.1186/S13075-014-0486-0  0.207
2015 Si Y, Kim S, Cui X, Zheng L, Oh SJ, Anderson T, AlSharabati M, Kazamel M, Volpicelli-Daley L, Bamman MM, Yu S, King PH. Transforming Growth Factor Beta (TGF-β) Is a Muscle Biomarker of Disease Progression in ALS and Correlates with Smad Expression. Plos One. 10: e0138425. PMID 26375954 DOI: 10.1371/Journal.Pone.0138425  0.207
2016 Gao S, Cui X, Wang X, Burg MB, Dmitrieva NI. Cross-Sectional Positive Association of Serum Lipids and Blood Pressure With Serum Sodium Within the Normal Reference Range of 135-145 mmol/L. Arteriosclerosis, Thrombosis, and Vascular Biology. PMID 28062505 DOI: 10.1161/Atvbaha.116.308413  0.204
2016 Rock CL, Sedjo RL, Toriola A, Liu J, Byers T, Ganz PA, Cui X, Tiwari H, Absher D, Colditz GA. Changes in biomarkers and DNA methylation in breast cancer survivors enrolled in the ENERGY weight loss trial: A pilot study. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 34: 181. PMID 28151336 DOI: 10.1200/Jco.2016.34.3_Suppl.181  0.199
2014 Johnson SL, Hughes SO, Cui X, Li X, Allison DB, Liu Y, Goodell LS, Nicklas T, Power TG, Vollrath K. Portion sizes for children are predicted by parental characteristics and the amounts parents serve themselves. The American Journal of Clinical Nutrition. 99: 763-70. PMID 24477036 DOI: 10.3945/Ajcn.113.078311  0.195
2012 Moskowitz-Kassai E, Mackelaite L, Chen J, Patel K, Dadhania DM, Gross SS, Chander P, Delaney V, Deng L, Chen L, Cui X, Suthanthiran M, Goligorsky MS. Excretion of anti-angiogenic proteins in patients with chronic allograft dysfunction. Nephrology, Dialysis, Transplantation : Official Publication of the European Dialysis and Transplant Association - European Renal Association. 27: 494-7. PMID 22253069 DOI: 10.1093/Ndt/Gfr638  0.193
2018 Carson TL, Wang F, Cui X, Jackson BE, Van Der Pol WJ, Lefkowitz EJ, Morrow C, Baskin ML. Associations between Race, Perceived Psychological Stress, and the Gut Microbiota in a Sample of Generally Healthy Black and White Women: A Pilot Study on the Role of Race and Perceived Psychological Stress. Psychosomatic Medicine. PMID 29901485 DOI: 10.1097/Psy.0000000000000614  0.19
2007 Wu X, Wang J, Cui X, Maianu L, Rhees B, Rosinski J, So WV, Willi SM, Osier MV, Hill HS, Page GP, Allison DB, Martin M, Garvey WT. The effect of insulin on expression of genes and biochemical pathways in human skeletal muscle (Endocrine (2007) 31, 1 (5-17) DOI: 10.1007/s12020-007- 0007-x) Endocrine. 32: 356. DOI: 10.1007/s12020-008-9033-6  0.154
2007 Ye J, Cui X, Loraine A, Bynum K, Kim NC, White G, De Luca M, Garfinkel MD, Lu X, Ruden DM. Methods for nutrigenomics and longevity studies in Drosophila: effects of diets high in sucrose, palmitic acid, soy, or beef. Methods in Molecular Biology (Clifton, N.J.). 371: 111-41. PMID 17634578 DOI: 10.1007/978-1-59745-361-5_10  0.142
2024 Gallini JW, Jasien CL, Mrug M, Cui X. US Veterans Administration Autosomal Dominant Polycystic Kidney Disease Cohort: Demographic, Comorbidity and Key Laboratory Data Characteristics. Kidney360. PMID 38424672 DOI: 10.34067/KID.0000000000000405  0.12
2024 Mrug M, Mrug E, Rosenblum F, Chen J, Cui X, Agarwal A, Zarjou A. Distinct Developmental Reprogramming Footprint of MacrophagesDuring Acute Kidney Injury Across Species. American Journal of Physiology. Renal Physiology. PMID 38357719 DOI: 10.1152/ajprenal.00013.2024  0.117
2022 Stackhouse CT, Anderson JC, Yue Z, Nguyen T, Eustace NJ, Langford CP, Wang J, Rowland Iv JR, Xing C, Mikhail FM, Cui X, Alrefai H, Bash RE, Lee KJ, Yang ES, et al. An in vivo model of glioblastoma radiation resistance identifies long non-coding RNAs and targetable kinases. Jci Insight. PMID 35852875 DOI: 10.1172/jci.insight.148717  0.111
2021 Cui X, Gao M, Huang Y, Liu X, Xu Y. Familial amyotrophic lateral sclerosis induced by gene mutation of SOD1G142A: a case report. Annals of Palliative Medicine. 10: 12900-12905. PMID 35016464 DOI: 10.21037/apm-21-3254  0.091
2017 Garcia PL, Miller AL, Gamblin TL, Council LN, Christein JD, Arnoletti JP, Heslin MJ, Reddy S, Richardson JH, Cui X, van Waardenburg RCAM, Bradner JE, Yang ES, Yoon KJ. JQ1 induces DNA damage and apoptosis, and inhibits tumor growth in a patient-derived xenograft model of cholangiocarcinoma. Molecular Cancer Therapeutics. PMID 29142067 DOI: 10.1158/1535-7163.Mct-16-0922  0.076
2020 Cui X, Gallini JW, Jasien CL, Mrug M. Autosomal Dominant Polycystic Kidney Disease does not significantly alter major COVID-19 outcomes among veterans. Medrxiv : the Preprint Server For Health Sciences. PMID 33269373 DOI: 10.1101/2020.11.25.20238675  0.063
2021 Doby BL, Brockmeier D, Lee KJ, Jasien C, Gallini J, Cui X, Zhang RH, Karp SJ, Marklin G, Lynch RJ. Opportunity to increase deceased donation for United States veterans. American Journal of Transplantation : Official Journal of the American Society of Transplantation and the American Society of Transplant Surgeons. PMID 34327835 DOI: 10.1111/ajt.16773  0.063
2022 O'Shea JG, Gallini JW, Cui X, Moanna A, Marconi VC. Rapid Antiretroviral Therapy Program: Development and Evaluation at a Veterans Affairs Medical Center in the Southern United States. Aids Patient Care and Stds. PMID 35587641 DOI: 10.1089/apc.2022.0039  0.062
2018 Behring M, Shrestha S, Manne U, Cui X, Gonzalez-Reymundez A, Grueneberg A, Vazquez AI. Integrated landscape of copy number variation and RNA expression associated with nodal metastasis in invasive ductal breast carcinoma. Oncotarget. 9: 36836-36848. PMID 30627325 DOI: 10.18632/Oncotarget.26386  0.054
2021 Cui X, Gallini JW, Jasien CL, Mrug M. Autosomal Dominant Polycystic Kidney Disease Does Not Significantly Alter Major COVID-19 Outcomes among Veterans. Kidney360. 2: 983-988. PMID 35373094 DOI: 10.34067/KID.0007282020  0.053
2020 Hackney ME, Bay AA, Jackson JM, Nocera JR, Krishnamurthy V, Crosson B, Evatt ML, Langley J, Cui X, McKay JL, Huddleston DE. Rationale and Design of the PAIRED Trial: Partnered Dance Aerobic Exercise as a Neuroprotective, Motor, and Cognitive Intervention in Parkinson's Disease. Frontiers in Neurology. 11: 943. PMID 33162925 DOI: 10.3389/fneur.2020.00943  0.053
2024 Ree A, Rapsas B, Denmon C, Vernon M, Rauch SA, Guo Y, Cui X, Stevens JS, Krishnamurthy V, Napadow V, Turner JA, Woodbury A. A Randomized, Sham-Controlled Trial of Cranial Electrical Stimulation for Fibromyalgia Pain and Physical Function, Using Brain Imaging Biomarkers. Journal of Visualized Experiments : Jove. PMID 38251752 DOI: 10.3791/65790  0.051
2016 Zhang J, Riby JE, Conde L, Grizzle WE, Cui X, Skibola CF. A Fucus vesiculosus extract inhibits estrogen receptor activation and induces cell death in female cancer cell lines. Bmc Complementary and Alternative Medicine. 16: 151. PMID 27234961 DOI: 10.1186/S12906-016-1129-6  0.05
2022 Schoen MS, Ramakrishnan U, Alvarez JA, Ziegler TR, Cui X, Singh RH. Characterization of Choline Nutriture among Adults and Children with Phenylketonuria. Nutrients. 14. PMID 36235708 DOI: 10.3390/nu14194056  0.046
2021 Meena RA, Sharifpour M, Gaddh M, Cui X, Xie Y, Di M, Brewster LP, Duwayri Y, Alabi O. COVID-19-associated venous thromboembolism portends worse survival. Seminars in Vascular Surgery. 34: 117-124. PMID 34642031 DOI: 10.1053/j.semvascsurg.2021.08.001  0.046
2019 Behring M, Vazquez AI, Cui X, Irvin MR, Ojesina AI, Agarwal S, Manne U, Shrestha S. Gain of function in somatic TP53 mutations is associated with immune-rich breast tumors and changes in tumor-associated macrophages. Molecular Genetics & Genomic Medicine. e1001. PMID 31637877 DOI: 10.1002/Mgg3.1001  0.045
2020 Hwangpo T, Wang Z, Ghably J, Bhatt SP, Cui X, Schroeder HW. Use of FEF25-75% to Guide IgG Dosing to Protect Pulmonary Function in CVID. Journal of Clinical Immunology. PMID 31897777 DOI: 10.1007/S10875-019-00730-4  0.045
2020 Woodbury A, Krishnamurthy V, Gebre M, Napadow V, Bicknese C, Liu M, Lukemire J, Kalangara J, Cui X, Guo Y, Sniecinski R, Crosson B. Feasibility of Auricular Field Stimulation in Fibromyalgia: Evaluation by Functional Magnetic Resonance Imaging, Randomized Trial. Pain Medicine (Malden, Mass.). PMID 33164085 DOI: 10.1093/pm/pnaa317  0.043
2016 Li Y, Buckhaults P, Cui X, Tollefsbol TO. Combinatorial epigenetic mechanisms and efficacy of early breast cancer inhibition by nutritive botanicals. Epigenomics. PMID 27478970 DOI: 10.2217/Epi-2016-0024  0.041
2021 Xu J, Xiao C, Song W, Cui X, Pan M, Wang Q, Feng Y, Xu Y. Elevated Heme Oxygenase-1 Correlates With Increased Brain Iron Deposition Measured by Quantitative Susceptibility Mapping and Decreased Hemoglobin in Patients With Parkinson's Disease. Frontiers in Aging Neuroscience. 13: 656626. PMID 33815094 DOI: 10.3389/fnagi.2021.656626  0.038
2021 Fu X, Deng W, Cui X, Zhou X, Song W, Pan M, Chi X, Xu J, Jiang Y, Wang Q, Xu Y. Time-Specific Pattern of Iron Deposition in Different Regions in Parkinson's Disease Measured by Quantitative Susceptibility Mapping. Frontiers in Neurology. 12: 631210. PMID 34421781 DOI: 10.3389/fneur.2021.631210  0.038
2020 Anderson BJ, Liu M, Cui X, Stevens M, Arensman MA. Adverse Outcomes Associated with Inpatient Administration of Beers List Medications Following Total Knee Replacement. Clinical Therapeutics. PMID 32248998 DOI: 10.1016/j.clinthera.2020.02.017  0.033
2023 Schoen MS, Boland KM, Christ SE, Cui X, Ramakrishnan U, Ziegler TR, Alvarez JA, Singh RH. Total choline intake and working memory performance in adults with phenylketonuria. Orphanet Journal of Rare Diseases. 18: 222. PMID 37516884 DOI: 10.1186/s13023-023-02842-y  0.032
2023 McLaughlin DK, Hoffmann C, Sasaki M, Li F, Ma J, Cui X, Sutliff RL, Brewster LP. Comparison of arterial storage conditions for delayed arterial ring testing. Jvs-Vascular Science. 4: 100122. PMID 37649473 DOI: 10.1016/j.jvssci.2023.100122  0.029
2021 Kelleher J, Zola S, Cui X, Shiyu Chen S, Gerber C, Parker MW, Davis C, Law S, Golden M, Vaughan CP. Feasibility of personalized visual mapping assistive technology to improve functional ability in persons with dementia. Jmir Aging. PMID 34269690 DOI: 10.2196/28165  0.027
2023 Alabi O, Beriwal S, Gallini JW, Cui X, Jasien C, Brewster L, Hunt KJ, Massarweh NN. Association of Health Care Utilization and Access to Care With Vascular Assessment Before Major Lower Extremity Amputation Among US Veterans. Jama Surgery. e230479. PMID 37074700 DOI: 10.1001/jamasurg.2023.0479  0.027
2022 Rim J, Gallini J, Jasien C, Cui X, Phillips L, Trammell A, Sadikot RT. Use of Oral Anti-Diabetic Drugs and Risk of Hospital and Intensive Care Unit Admissions for Infections. The American Journal of the Medical Sciences. PMID 35077701 DOI: 10.1016/j.amjms.2022.01.003  0.019
2021 Gallini JW, Benkeser D, Cui X, Shah AJ, Phillips LS, Hemnes AR, Hart CM, Trammell AW. Pulmonary hypertension: a new vascular complication of diabetes? Chest. PMID 34537188 DOI: 10.1016/j.chest.2021.09.005  0.01
2019 PHILLIPS LS, MOREHEAD F, SAVOYE LP, RHEE MK, OLSON D, BURGESS EH, CUI X, CALHOUN P, BAILEY R. 157-LB: Mealtime Insulin “Rescue” with Canagliflozin Diabetes. 68: 157-LB. DOI: 10.2337/DB19-157-LB  0.01
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