John Doebley - Publications

Affiliations: 
1987-1999 University of Minnesota, Twin Cities, Minneapolis, MN 
 1999- University of Wisconsin, Madison, Madison, WI 
Area:
Genetics, Biostatistics Biology, Molecular Biology
Website:
https://genetics.wisc.edu/staff/doebley-john/

123 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Samayoa LF, Olukolu BA, Yang CJ, Chen Q, Stetter MG, York AM, Sanchez-Gonzalez JJ, Glaubitz JC, Bradbury PJ, Romay MC, Sun Q, Yang J, Ross-Ibarra J, Buckler ES, Doebley JF, et al. Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte. Plos Genetics. 17: e1009797. PMID 34928949 DOI: 10.1371/journal.pgen.1009797  0.651
2021 Chen Q, Samayoa LF, Yang CJ, Olukolu BA, York AM, Sanchez-Gonzalez JJ, Xue W, Glaubitz JC, Bradbury PJ, Romay MC, Sun Q, Buckler ES, Holland JB, Doebley JF. A conserved genetic architecture among populations of the maize progenitor, teosinte, was radically altered by domestication. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34686607 DOI: 10.1073/pnas.2112970118  0.686
2020 Chen Q, Samayoa LF, Yang CJ, Bradbury PJ, Olukolu BA, Neumeyer MA, Romay MC, Sun Q, Lorant A, Buckler ES, Ross-Ibarra J, Holland JB, Doebley JF. The genetic architecture of the maize progenitor, teosinte, and how it was altered during maize domestication. Plos Genetics. 16: e1008791. PMID 32407310 DOI: 10.1371/Journal.Pgen.1008791  0.704
2019 Chen Q, Yang CJ, York AM, Xue W, Daskalska LL, DeValk CA, Krueger KW, Lawton SB, Spiegelberg BG, Schnell JM, Neumeyer MA, Perry JS, Peterson AC, Kim B, Bergstrom L, ... ... Doebley JF, et al. TeoNAM: A Nested Association Mapping Population for Domestication and Agronomic Trait Analysis in Maize. Genetics. PMID 31481533 DOI: 10.1534/genetics.119.302594  0.386
2019 Xue W, Anderson SN, Wang X, Yang L, Crisp PA, Li Q, Noshay J, Albert PS, Birchler JA, Bilinski P, Stitzer MC, Ross-Ibarra J, Flint-Garcia S, Chen X, Springer NM, ... Doebley JF, et al. Hybrid Decay: A Transgenerational Epigenetic Decline in Vigor and Viability Triggered in Backcross Populations of Teosinte with Maize. Genetics. PMID 31320409 DOI: 10.1534/Genetics.119.302378  0.341
2019 Yang CJ, Samayoa LF, Bradbury PJ, Olukolu BA, Xue W, York AM, Tuholski MR, Wang W, Daskalska LL, Neumeyer MA, Sanchez-Gonzalez JJ, Romay MC, Glaubitz JC, Sun Q, Buckler ES, ... ... Doebley JF, et al. The genetic architecture of teosinte catalyzed and constrained maize domestication. Proceedings of the National Academy of Sciences of the United States of America. PMID 30842282 DOI: 10.1073/Pnas.1820997116  0.692
2018 Guo L, Wang X, Zhao M, Huang C, Li C, Li D, Yang CJ, York AM, Xue W, Xu G, Liang Y, Chen Q, Doebley JF, Tian F. Stepwise cis-Regulatory Changes in ZCN8 Contribute to Maize Flowering-Time Adaptation. Current Biology : Cb. PMID 30220503 DOI: 10.1016/j.cub.2018.07.029  0.362
2017 Bukowski R, Guo X, Lu Y, Zou C, He B, Rong Z, Wang B, Xu D, Yang B, Xie C, Fan L, Gao S, Xu X, Zhang G, Li Y, ... ... Doebley JF, et al. Construction of the third generation Zea mays haplotype map. Gigascience. PMID 29300887 DOI: 10.1093/Gigascience/Gix134  0.347
2017 Huang C, Sun H, Xu D, Chen Q, Liang Y, Wang X, Xu G, Tian J, Wang C, Li D, Wu L, Yang X, Jin W, Doebley JF, Tian F. ZmCCT9 enhances maize adaptation to higher latitudes. Proceedings of the National Academy of Sciences of the United States of America. PMID 29279404 DOI: 10.1073/pnas.1718058115  0.303
2017 Wang X, Chen Q, Wu Y, Lemmon ZH, Xu G, Huang C, Liang Y, Xu D, Li D, Doebley JF, Tian F. Genome-wide analysis of transcriptional variability in a large maize-teosinte population. Molecular Plant. PMID 29275164 DOI: 10.1016/j.molp.2017.12.011  0.328
2017 Wills DM, Fang Z, York AM, Holland JB, Doebley JF. Defining the role of the MADS-box gene, Zea agamous like1, a target of selection during maize domestication. The Journal of Heredity. PMID 28992108 DOI: 10.1093/jhered/esx073  0.68
2017 Studer AJ, Wang H, Doebley JF. Selection During Maize Domestication Targeted a Gene Network Controlling Plant and Inflorescence Architecture. Genetics. PMID 28754660 DOI: 10.1534/genetics.117.300071  0.322
2016 Yang CJ, Kursel LE, Studer AJ, Bartlett ME, Whipple CJ, Doebley JF. A Gene for Genetic Background in Zea mays: Fine-Mapping enhancer of teosinte branched1.2 (etb1.2) to a YABBY Class Transcription Factor. Genetics. PMID 27729422 DOI: 10.1534/Genetics.116.194928  0.352
2016 Calderón CI, Yandell BS, Doebley JF. Fine Mapping of a QTL Associated with Kernel Row Number on Chromosome 1 of Maize. Plos One. 11: e0150276. PMID 26930509 DOI: 10.1371/Journal.Pone.0150276  0.324
2015 Wang H, Studer AJ, Zhao Q, Meeley R, Doebley JF. Evidence That the Origin of Naked Kernels During Maize Domestication Was Caused by a Single Amino Acid Substitution in tga1. Genetics. 200: 965-74. PMID 25943393 DOI: 10.1534/genetics.115.175752  0.356
2014 Lemmon ZH, Doebley JF. Genetic dissection of a genomic region with pleiotropic effects on domestication traits in maize reveals multiple linked QTL. Genetics. 198: 345-53. PMID 24950893 DOI: 10.1534/genetics.114.165845  0.423
2014 Lang Z, Wills DM, Lemmon ZH, Shannon LM, Bukowski R, Wu Y, Messing J, Doebley JF. Defining the Role of prolamin-box binding factor1 Gene During Maize Domestication. The Journal of Heredity. PMID 24683184 DOI: 10.1093/Jhered/Esu019  0.347
2013 Wills DM, Whipple CJ, Takuno S, Kursel LE, Shannon LM, Ross-Ibarra J, Doebley JF. From many, one: genetic control of prolificacy during maize domestication. Plos Genetics. 9: e1003604. PMID 23825971 DOI: 10.1371/Journal.Pgen.1003604  0.439
2012 Hung HY, Shannon LM, Tian F, Bradbury PJ, Chen C, Flint-Garcia SA, McMullen MD, Ware D, Buckler ES, Doebley JF, Holland JB. ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize. Proceedings of the National Academy of Sciences of the United States of America. 109: E1913-21. PMID 22711828 DOI: 10.1073/Pnas.1203189109  0.664
2012 Hufford MB, Xu X, van Heerwaarden J, Pyhäjärvi T, Chia JM, Cartwright RA, Elshire RJ, Glaubitz JC, Guill KE, Kaeppler SM, Lai J, Morrell PL, Shannon LM, Song C, Springer NM, ... ... Doebley J, et al. Comparative population genomics of maize domestication and improvement. Nature Genetics. 44: 808-11. PMID 22660546 DOI: 10.1038/Ng.2309  0.497
2012 Chia JM, Song C, Bradbury PJ, Costich D, de Leon N, Doebley J, Elshire RJ, Gaut B, Geller L, Glaubitz JC, Gore M, Guill KE, Holland J, Hufford MB, Lai J, et al. Maize HapMap2 identifies extant variation from a genome in flux. Nature Genetics. 44: 803-7. PMID 22660545 DOI: 10.1038/Ng.2313  0.455
2012 Lin Z, Li X, Shannon LM, Yeh CT, Wang ML, Bai G, Peng Z, Li J, Trick HN, Clemente TE, Doebley J, Schnable PS, Tuinstra MR, Tesso TT, White F, et al. Parallel domestication of the Shattering1 genes in cereals. Nature Genetics. 44: 720-4. PMID 22581231 DOI: 10.1038/Ng.2281  0.449
2012 Fang Z, Pyhäjärvi T, Weber AL, Dawe RK, Glaubitz JC, González Jde J, Ross-Ibarra C, Doebley J, Morrell PL, Ross-Ibarra J. Megabase-scale inversion polymorphism in the wild ancestor of maize. Genetics. 191: 883-94. PMID 22542971 DOI: 10.1534/Genetics.112.138578  0.438
2012 Studer AJ, Doebley JF. Evidence for a natural allelic series at the maize domestication locus teosinte branched1. Genetics. 191: 951-8. PMID 22505628 DOI: 10.1534/genetics.112.138479  0.395
2012 Preston JC, Wang H, Kursel L, Doebley J, Kellogg EA. The role of teosinte glume architecture (tga1) in coordinated regulation and evolution of grass glumes and inflorescence axes. The New Phytologist. 193: 204-15. PMID 21954998 DOI: 10.1111/J.1469-8137.2011.03908.X  0.421
2011 Studer A, Zhao Q, Ross-Ibarra J, Doebley J. Identification of a functional transposon insertion in the maize domestication gene tb1. Nature Genetics. 43: 1160-3. PMID 21946354 DOI: 10.1038/Ng.942  0.426
2011 Whipple CJ, Kebrom TH, Weber AL, Yang F, Hall D, Meeley R, Schmidt R, Doebley J, Brutnell TP, Jackson DP. Grassy tillers1 promotes apical dominance in maize and responds to Shade signals in the grasses Proceedings of the National Academy of Sciences of the United States of America. 108: E506-E512. PMID 21808030 DOI: 10.1073/Pnas.1102819108  0.471
2011 Studer AJ, Doebley JF. Do large effect QTL fractionate? A case study at the maize domestication QTL teosinte branched1. Genetics. 188: 673-81. PMID 21515578 DOI: 10.1534/genetics.111.126508  0.4
2011 van Heerwaarden J, Doebley J, Briggs WH, Glaubitz JC, Goodman MM, de Jesus Sanchez Gonzalez J, Ross-Ibarra J. Genetic signals of origin, spread, and introgression in a large sample of maize landraces. Proceedings of the National Academy of Sciences of the United States of America. 108: 1088-92. PMID 21189301 DOI: 10.1073/Pnas.1013011108  0.726
2011 Zhao Q, Weber AL, McMullen MD, Guill K, Doebley J. MADS-box genes of maize: frequent targets of selection during domestication. Genetics Research. 93: 65-75. PMID 21144126 DOI: 10.1017/S0016672310000509  0.441
2010 Van Heerwaarden J, Ross-Ibarra J, Doebley J, Glaubitz JC, González Jde J, Gaut BS, Eguiarte LE. Fine scale genetic structure in the wild ancestor of maize (Zea mays ssp. parviglumis). Molecular Ecology. 19: 1162-73. PMID 20163543 DOI: 10.1111/J.1365-294X.2010.04559.X  0.49
2010 Paterson AH, Lin YR, Li Z, Schertz KF, Doebley JF, Pinson SR, Liu SC, Stansel JW, Irvine JE. Convergent domestication of cereal crops by independent mutations at corresponding genetic Loci. Science (New York, N.Y.). 269: 1714-8. PMID 17821643 DOI: 10.1126/science.269.5231.1714  0.422
2009 Weber AL, Zhao Q, McMullen MD, Doebley JF. Using association mapping in teosinte to investigate the function of maize selection-candidate genes. Plos One. 4: e8227. PMID 20011044 DOI: 10.1371/journal.pone.0008227  0.363
2009 Doebley J. S14-02 Evolution under domestication: Examples from maize and other crops Mechanisms of Development. 126: S14. DOI: 10.1016/J.Mod.2009.06.979  0.351
2009 Quijada P, Shannon LM, Glaubitz JC, Studer AJ, Doebley J. Characterization of a major maize domestication qtl on the short arm of chromosome 1 Maydica. 54: 401-408.  0.349
2008 Vigouroux Y, Glaubitz JC, Matsuoka Y, Goodman MM, Sánchez G J, Doebley J. Population structure and genetic diversity of New World maize races assessed by DNA microsatellites. American Journal of Botany. 95: 1240-53. PMID 21632329 DOI: 10.3732/Ajb.0800097  0.698
2008 Weber AL, Briggs WH, Rucker J, Baltazar BM, de Jesús Sánchez-Gonzalez J, Feng P, Buckler ES, Doebley J. The genetic architecture of complex traits in teosinte (Zea mays ssp. parviglumis): new evidence from association mapping. Genetics. 180: 1221-32. PMID 18791250 DOI: 10.1534/Genetics.108.090134  0.39
2008 Zhao Q, Thuillet AC, Uhlmann NK, Weber A, Rafalski JA, Allen SM, Tingey S, Doebley J. The role of regulatory genes during maize domestication: evidence from nucleotide polymorphism and gene expression. Genetics. 178: 2133-43. PMID 18430939 DOI: 10.1534/Genetics.107.085506  0.433
2008 Thuillet AC, Tenaillon MI, Anderson LK, Mitchell SE, Kresovich S, Stack SM, Gaut B, Doebley J. A weak effect of background selection on trinucleotide microsatellites in maize Journal of Heredity. 99: 45-55. PMID 17962226 DOI: 10.1093/Jhered/Esm082  0.447
2007 Briggs WH, McMullen MD, Gaut BS, Doebley J. Linkage mapping of domestication loci in a large maize teosinte backcross resource. Genetics. 177: 1915-28. PMID 17947434 DOI: 10.1534/Genetics.107.076497  0.496
2007 Weber A, Clark RM, Vaughn L, Sánchez-Gonzalez Jde J, Yu J, Yandell BS, Bradbury P, Doebley J. Major regulatory genes in maize contribute to standing variation in teosinte (Zea mays ssp. parviglumis). Genetics. 177: 2349-59. PMID 17947410 DOI: 10.1534/Genetics.107.080424  0.392
2006 Doebley JF, Gaut BS, Smith BD. The molecular genetics of crop domestication. Cell. 127: 1309-21. PMID 17190597 DOI: 10.1016/J.Cell.2006.12.006  0.376
2006 Doebley J. Plant science. Unfallen grains: how ancient farmers turned weeds into crops. Science (New York, N.Y.). 312: 1318-9. PMID 16741100 DOI: 10.1126/Science.1128836  0.412
2006 Clark RM, Wagler TN, Quijada P, Doebley J. A distant upstream enhancer at the maize domestication gene tb1 has pleiotropic effects on plant and inflorescent architecture. Nature Genetics. 38: 594-7. PMID 16642024 DOI: 10.1038/Ng1784  0.5
2006 Zhao W, Canaran P, Jurkuta R, Fulton T, Glaubitz J, Buckler E, Doebley J, Gaut B, Goodman M, Holland J, Kresovich S, McMullen M, Stein L, Ware D. Panzea: a database and resource for molecular and functional diversity in the maize genome. Nucleic Acids Research. 34: D752-7. PMID 16381974 DOI: 10.1093/Nar/Gkj011  0.697
2006 Yu J, Pressoir G, Briggs WH, Vroh Bi I, Yamasaki M, Doebley JF, McMullen MD, Gaut BS, Nielsen DM, Holland JB, Kresovich S, Buckler ES. A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nature Genetics. 38: 203-8. PMID 16380716 DOI: 10.1038/Ng1702  0.621
2006 Bomblies K, Doebley JF. Pleiotropic effects of the duplicate maize FLORICAULA/LEAFY genes zfl1 and zfl2 on traits under selection during maize domestication. Genetics. 172: 519-31. PMID 16204211 DOI: 10.1534/Genetics.105.048595  0.428
2006 Doebley J. The evolution of plant form: An example from maize Developmental Biology. 295: 337. DOI: 10.1016/J.Ydbio.2006.04.048  0.358
2005 Flint-Garcia SA, Thuillet AC, Yu J, Pressoir G, Romero SM, Mitchell SE, Doebley J, Kresovich S, Goodman MM, Buckler ES. Maize association population: a high-resolution platform for quantitative trait locus dissection. The Plant Journal : For Cell and Molecular Biology. 44: 1054-64. PMID 16359397 DOI: 10.1111/J.1365-313X.2005.02591.X  0.692
2005 Yamasaki M, Tenaillon MI, Bi IV, Schroeder SG, Sanchez-Villeda H, Doebley JF, Gaut BS, McMullen MD. A large-scale screen for artificial selection in maize identifies candidate agronomic loci for domestication and crop improvement. The Plant Cell. 17: 2859-72. PMID 16227451 DOI: 10.1105/Tpc.105.037242  0.391
2005 Wang H, Nussbaum-Wagler T, Li B, Zhao Q, Vigouroux Y, Faller M, Bomblies K, Lukens L, Doebley JF. The origin of the naked grains of maize. Nature. 436: 714-9. PMID 16079849 DOI: 10.1038/Nature03863  0.669
2005 Clark RM, Tavaré S, Doebley J. Estimating a nucleotide substitution rate for maize from polymorphism at a major domestication locus. Molecular Biology and Evolution. 22: 2304-12. PMID 16079248 DOI: 10.1093/Molbev/Msi228  0.405
2005 Wright SI, Bi IV, Schroeder SG, Yamasaki M, Doebley JF, McMullen MD, Gaut BS. The effects of artificial selection on the maize genome. Science (New York, N.Y.). 308: 1310-4. PMID 15919994 DOI: 10.1126/Science.1107891  0.434
2005 Bomblies K, Doebley JF. Molecular evolution of FLORICAULA/LEAFY orthologs in the Andropogoneae (Poaceae). Molecular Biology and Evolution. 22: 1082-94. PMID 15689530 DOI: 10.1093/Molbev/Msi095  0.401
2005 Fukunaga K, Hill J, Vigouroux Y, Matsuoka Y, Sanchez G J, Liu K, Buckler ES, Doebley J. Genetic diversity and population structure of teosinte. Genetics. 169: 2241-54. PMID 15687282 DOI: 10.1534/Genetics.104.031393  0.539
2005 Vigouroux Y, Mitchell S, Matsuoka Y, Hamblin M, Kresovich S, Smith JS, Jaqueth J, Smith OS, Doebley J. An analysis of genetic diversity across the maize genome using microsatellites. Genetics. 169: 1617-30. PMID 15654118 DOI: 10.1534/Genetics.104.032086  0.503
2004 Gallavotti A, Zhao Q, Kyozuka J, Meeley RB, Ritter MK, Doebley JF, Pè ME, Schmidt RJ. The role of barren stalk1 in the architecture of maize. Nature. 432: 630-5. PMID 15577912 DOI: 10.1038/Nature03148  0.38
2004 Doebley J. The genetics of maize evolution. Annual Review of Genetics. 38: 37-59. PMID 15568971 DOI: 10.1146/Annurev.Genet.38.072902.092425  0.53
2004 Lauter N, Gustus C, Westerbergh A, Doebley J. The inheritance and evolution of leaf pigmentation and pubescence in teosinte. Genetics. 167: 1949-59. PMID 15342532 DOI: 10.1534/Genetics.104.026997  0.47
2004 Westerbergh A, Doebley J. Quantitative trait loci controlling phenotypes related to the perennial versus annual habit in wild relatives of maize. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 109: 1544-53. PMID 15338134 DOI: 10.1007/S00122-004-1778-6  0.451
2004 Clark RM, Linton E, Messing J, Doebley JF. Pattern of diversity in the genomic region near the maize domestication gene tb1. Proceedings of the National Academy of Sciences of the United States of America. 101: 700-7. PMID 14701910 DOI: 10.1073/Pnas.2237049100  0.361
2003 Liu K, Goodman M, Muse S, Smith JS, Buckler E, Doebley J. Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites. Genetics. 165: 2117-28. PMID 14704191  0.695
2003 Jaenicke-Després V, Buckler ES, Smith BD, Gilbert MT, Cooper A, Doebley J, Pääbo S. Early allelic selection in maize as revealed by ancient DNA. Science (New York, N.Y.). 302: 1206-8. PMID 14615538 DOI: 10.1126/Science.1089056  0.479
2003 Vigouroux Y, Matsuoka Y, Doebley J. Directional evolution for microsatellite size in maize. Molecular Biology and Evolution. 20: 1480-3. PMID 12832640 DOI: 10.1093/Molbev/Msg156  0.441
2003 Bomblies K, Wang RL, Ambrose BA, Schmidt RJ, Meeley RB, Doebley J. Duplicate FLORICAULA/LEAFY homologs zfl1 and zfl2 control inflorescence architecture and flower patterning in maize. Development (Cambridge, England). 130: 2385-95. PMID 12702653 DOI: 10.1242/Dev.00457  0.462
2002 Matsuoka Y, Mitchell SE, Kresovich S, Goodman M, Doebley J. Microsatellites in Zea - variability, patterns of mutations, and use for evolutionary studies. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 104: 436-450. PMID 12582717 DOI: 10.1007/S001220100694  0.718
2002 Vigouroux Y, Jaqueth JS, Matsuoka Y, Smith OS, Beavis WD, Smith JS, Doebley J. Rate and pattern of mutation at microsatellite loci in maize. Molecular Biology and Evolution. 19: 1251-60. PMID 12140237 DOI: 10.1093/Oxfordjournals.Molbev.A004186  0.337
2002 Vigouroux Y, McMullen M, Hittinger CT, Houchins K, Schulz L, Kresovich S, Matsuoka Y, Doebley J. Identifying genes of agronomic importance in maize by screening microsatellites for evidence of selection during domestication. Proceedings of the National Academy of Sciences of the United States of America. 99: 9650-5. PMID 12105270 DOI: 10.1073/Pnas.112324299  0.451
2002 Matsuoka Y, Vigouroux Y, Goodman MM, Sanchez G J, Buckler E, Doebley J. A single domestication for maize shown by multilocus microsatellite genotyping. Proceedings of the National Academy of Sciences of the United States of America. 99: 6080-4. PMID 11983901 DOI: 10.1073/Pnas.052125199  0.723
2002 Westerbergh A, Doebley J. Morphological traits defining species differences in wild relatives of maize are controlled by multiple quantitative trait loci. Evolution; International Journal of Organic Evolution. 56: 273-83. PMID 11926495 DOI: 10.1111/J.0014-3820.2002.Tb01337.X  0.498
2002 Lev-Yadun S, Abbo S, Doebley J. Wheat, rye, and barley on the cob? Nature Biotechnology. 20: 337-8. PMID 11923831 DOI: 10.1038/Nbt0402-337B  0.335
2002 Lauter N, Doebley J. Genetic variation for phenotypically invariant traits detected in teosinte: implications for the evolution of novel forms. Genetics. 160: 333-42. PMID 11805068  0.445
2002 Baum DA, Doebley J, Irish VF, Kramer EM. Response: Missing links: The genetic architecture of flower and floral diversification Trends in Plant Science. 7: 31-34. DOI: 10.1016/S1360-1385(01)02181-1  0.458
2001 Remington DL, Thornsberry JM, Matsuoka Y, Wilson LM, Whitt SR, Doebley J, Kresovich S, Goodman MM, Buckler ES. Structure of linkage disequilibrium and phenotypic associations in the maize genome. Proceedings of the National Academy of Sciences of the United States of America. 98: 11479-84. PMID 11562485 DOI: 10.1073/Pnas.201394398  0.734
2001 Tenaillon MI, Sawkins MC, Long AD, Gaut RL, Doebley JF, Gaut BS. Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp. mays L.). Proceedings of the National Academy of Sciences of the United States of America. 98: 9161-6. PMID 11470895 DOI: 10.1073/Pnas.151244298  0.359
2001 Thornsberry JM, Goodman MM, Doebley J, Kresovich S, Nielsen D, Buckler ES. Dwarf8 polymorphisms associate with variation in flowering time. Nature Genetics. 28: 286-9. PMID 11431702 DOI: 10.1038/90135  0.728
2001 Doebley J. An evolutionist visits the 43rd Annual Maize Genetics Conference Plant Cell. 13: 1255-1259. PMID 11402157 DOI: 10.1105/Tpc.13.6.1255  0.466
2001 Lukens L, Doebley J. Molecular evolution of the teosinte branched gene among maize and related grasses Molecular Biology and Evolution. 18: 627-638. PMID 11264415 DOI: 10.1093/Oxfordjournals.Molbev.A003843  0.667
2001 Bennetzen J, Buckler E, Chandler V, Doebley J, Dorweiler J, Gaut B, Freeling M, Hake S, Kellogg E, Poethig RS, Walbot V, Wessler S. Genetic Evidence and the Origin of Maize Latin American Antiquity. 12: 84-86. DOI: 10.2307/971759  0.412
2001 Wang R, Stec A, Hey J, Lukens L, Doebley J. Erratum: correction: The limits of selection during maize domestication Nature. 410: 718-718. DOI: 10.1038/35070620  0.617
2000 Doebley J. A tomato gene weighs in Science. 289: 71-72. PMID 10928932 DOI: 10.1126/Science.289.5476.71  0.389
1999 White SE, Doebley JF. The molecular evolution of terminal ear1, a regulatory gene in the genus Zea. Genetics. 153: 1455-62. PMID 10545473  0.455
1999 Cubas P, Lauter N, Doebley J, Coen E. The TCP domain: A motif found in proteins regulating plant growth and development Plant Journal. 18: 215-222. PMID 10363373 DOI: 10.1046/J.1365-313X.1999.00444.X  0.36
1999 Wang RL, Stec A, Hey J, Lukens L, Doebley J. The limits of selection during maize domestication Nature. 398: 236-239. PMID 10094045 DOI: 10.1038/18435  0.718
1999 Lukens LN, Doebley J. Epistatic and environmental interactions for quantitative trait loci involved in maize evolution Genetical Research. 74: 291-302. DOI: 10.1017/S0016672399004073  0.692
1998 Doebley J. Maize as a model system for investigating the molecular basis of morphological evolution in plants Symposia of the Society For Experimental Biology. 51: 127-132. PMID 10645435  0.384
1998 White S, Doebley J. Of genes and genomes and the origin of maize Trends in Genetics. 14: 327-332. PMID 9724966 DOI: 10.1016/S0168-9525(98)01524-8  0.468
1998 Doebley J, Lukens L. Transcriptional regulators and the evolution of plant form Plant Cell. 10: 1075-1082. PMID 9668128 DOI: 10.1105/Tpc.10.7.1075  0.651
1997 Doebley J, Wang RL. Genetics and the evolution of plant form: An example from Maize Cold Spring Harbor Symposia On Quantitative Biology. 62: 361-367. PMID 9598370 DOI: 10.1101/Sqb.1997.062.01.043  0.469
1997 Doebley J, Stec A, Hubbard L. The evolution of apical dominance in maize Nature. 386: 485-488. PMID 9087405 DOI: 10.1038/386485A0  0.425
1997 Dorweiler JE, Doebley J. Developmental analysis of teosinte glume architecture1: A key locus in the evolution of maize (Poaceae) American Journal of Botany. 84: 1313-1322. DOI: 10.2307/2446130  0.44
1996 Hanson MA, Gaut BS, Stec AO, Fuerstenberg SI, Goodman MM, Coe EH, Doebley JF. Evolution of anthocyanin biosynthesis in maize kernels: the role of regulatory and enzymatic loci. Genetics. 143: 1395-407. PMID 8807310  0.372
1995 Doebley J, Stec A, Gustus C. teosinte branched1 and the origin of maize: Evidence for epistasis and the evolution of dominance Genetics. 141: 333-346. PMID 8536981  0.418
1995 Doebley J. Genetic Dissection of the Morphological Evolution of Maize Aliso. 14: 297-304. DOI: 10.5642/aliso.19951404.08  0.366
1995 La Duke JC, Doebley J. A chloroplast DNA based phylogeny of the Malvaceae Systematic Botany. 20: 259-271. DOI: 10.2307/2419495  0.324
1995 Paterson AH, Lin YR, Li Z, Schertz KF, Doebley JF, Pinson SRM, Liu SC, Stansel JW, Irvine JE. Convergent domestication of cereal crops by independent mutations at corresponding genetic loci Science. 269: 1714-1718.  0.425
1994 Larson SR, Doebley J. Restriction site variation in the chloroplast genome of Tripsacum (Poaceae): Phylogeny and rates of sequence evolution Systematic Botany. 19: 21-34. DOI: 10.2307/2419709  0.349
1994 Pereira MG, Lee M, Bramel-Cox P, Woodman W, Doebley J, Whitkus R. Construction of an RFLP map in sorghum and comparative mapping in maize Genome. 37: 236-243. DOI: 10.1139/G94-033  0.429
1994 Doebley J, Bacigalupo A, Stec A. Inheritance of kernel weight in two maize-teosinte hybrid populations: Implications for crop evolution Journal of Heredity. 85: 191-195. DOI: 10.1093/Oxfordjournals.Jhered.A111434  0.463
1993 Doebley J, Stec A. Inheritance of the morphological differences between maize and teosinte: Comparison of results for two F2 populations Genetics. 134: 559-570. PMID 8325489  0.379
1993 Doebley J. Genetics, development and plant evolution Current Opinion in Genetics and Development. 3: 865-872. PMID 8118211 DOI: 10.1016/0959-437X(93)90006-B  0.484
1993 Dorweiler J, Stec A, Kermicle J, Doebley J. Teosinte glume architecture 1: A genetic locus controlling a key step in maize evolution Science. 262: 233-235. DOI: 10.1126/Science.262.5131.233  0.45
1992 Aldrich PR, Doebley J, Schertz KF, Stec A. Patterns of allozyme variation in cultivated and wild Sorghum bicolor. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 85: 451-60. PMID 24197460 DOI: 10.1007/Bf00222327  0.529
1992 Aldrich PR, Doebley J. Restriction fragment variation in the nuclear and chloroplast genomes of cultivated and wild Sorghum bicolor. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 85: 293-302. PMID 24197318 DOI: 10.1007/Bf00222873  0.526
1992 Doebley J. Mapping the genes that made maize Trends in Genetics. 8: 302-307. PMID 1365395 DOI: 10.1016/0168-9525(92)90261-2  0.459
1992 Doebley J, von Bothmer R, Larson S. CHLOROPLAST DNA VARIATION AND THE PHYLOGENY OF HORDEUM (POACEAE) American Journal of Botany. 79: 576-584. DOI: 10.1002/J.1537-2197.1992.Tb14595.X  0.369
1991 Doebley J, Stec A. Genetic analysis of the morphological differences between maize and teosinte Genetics. 129: 285-295. PMID 1682215  0.434
1990 Doebley J, Durbin M, Golenberg EM, Clegg MT, Ma DP. EVOLUTIONARY ANALYSIS OF THE LARGE SUBUNIT OF CARBOXYLASE (rbcL) NUCLEOTIDE SEQUENCE AMONG THE GRASSES (GRAMINEAE). Evolution; International Journal of Organic Evolution. 44: 1097-1108. PMID 28569033 DOI: 10.1111/J.1558-5646.1990.Tb03828.X  0.347
1990 Doebley J, Stec A, Wendel J, Edwards M. Genetic and morphological analysis of a maize-teosinte F2 population: implications for the origin of maize. Proceedings of the National Academy of Sciences of the United States of America. 87: 9888-9892. PMID 11607138 DOI: 10.1073/Pnas.87.24.9888  0.488
1990 Doebley J. Molecular Evidence and the Evolution of Maize Economic Botany. 44: 6-27. DOI: 10.1007/Bf02860472  0.465
1990 Morden CW, Doebley J, Schertz KF. Allozyme variation among the spontaneous species of Sorghum section Sorghum (Poaceae) Theoretical and Applied Genetics. 80: 296-304. DOI: 10.1007/Bf00210063  0.472
1990 Doebley J, Stec A, Wendel J, Edwards M. Genetic and morphological analysis of a maize-teosinte F2 population: Implications for the origin of maize Proceedings of the National Academy of Sciences of the United States of America. 87: 9888-9892.  0.391
1989 Doebley J. MOLECULAR EVIDENCE FOR A MISSING WILD RELATIVE OF MAIZE AND THE INTROGRESSION OF ITS CHLOROPLAST GENOME INTO ZEA PERENNIS. Evolution; International Journal of Organic Evolution. 43: 1555-1559. PMID 28564240 DOI: 10.1111/J.1558-5646.1989.Tb02603.X  0.325
1989 Morden CW, Doebley JF, Schertz KF. ALLOZYME VARIATION IN OLD WORLD RACES OF SORGHUM BICOLOR (POACEAE) American Journal of Botany. 76: 247-255. DOI: 10.1002/J.1537-2197.1989.Tb11308.X  0.438
1988 Doebley J, Wendel JD, Smith JSC, Stuber CW, Goodman MM. The origin of cornbelt maize: The isozyme evidence Economic Botany. 42: 120-131. DOI: 10.1007/Bf02859042  0.683
1987 Doebley J, Goodman MM, Stuber CW. Patterns of isozyme variation between maize and Mexican annual teosinte Economic Botany. 41: 234-246. DOI: 10.1007/Bf02858971  0.713
1986 Doebley JF, Goodman OM, Stuber CW. EXCEPTIONAL GENETIC DIVERGENCE OF NORTHERN FLINT CORN. American Journal of Botany. 73: 64-69. PMID 30139112 DOI: 10.1002/j.1537-2197.1986.tb09681.x  0.404
1986 Doebley J, Morden CW, Schertz KF. A gene modifying mitochondrial malate dehydrogenase isozymes in Sorghum (Gramineae) Biochemical Genetics. 24: 813-819. PMID 3800867 DOI: 10.1007/Bf00554521  0.383
1986 Doebley JF, Goodman MM, Stuber CW. Exceptional genetic divergence of Northern Flint corn American Journal of Botany. 73: 64-69.  0.353
1984 Doebley JF, Goodman MM, Stuber CW. Isoenzymatic Variation in Zea (Gramineae) Systematic Botany. 9: 203. DOI: 10.2307/2418824  0.647
1984 Doebley JF. Maize Introgression Into Teosinte-A Reappraisal Annals of the Missouri Botanical Garden. 71: 1100. DOI: 10.2307/2399247  0.318
1980 Iltis HH, Doebley JF. TAXONOMY OF ZEA (GRAMINEAE). II. SUBSPECIFIC CATEGORIES IN THE ZEA MAYS COMPLEX AND A GENERIC SYNOPSIS American Journal of Botany. 67: 994-1004. DOI: 10.1002/J.1537-2197.1980.Tb07731.X  0.651
1980 Doebley JF, Iltis HH. TAXONOMY OF ZEA (GRAMINEAE). I. A SUBGENERIC CLASSIFICATION WITH KEY TO TAXA American Journal of Botany. 67: 982-993. DOI: 10.1002/J.1537-2197.1980.Tb07730.X  0.63
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