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Cecil M. Lewis - Publications

Affiliations: 
Department of Anthropology University of Oklahoma, Norman, OK, United States 
Area:
Genetics, Cultural Anthropology, Latin American Studies
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31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Borry M, Cordova B, Perri A, Wibowo M, Prasad Honap T, Ko J, Yu J, Britton K, Girdland-Flink L, Power RC, Stuijts I, Salazar-García DC, Hofman C, Hagan R, Samdapawindé Kagoné T, ... ... Lewis C, et al. CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content. Peerj. 8: e9001. PMID 32337106 DOI: 10.7717/Peerj.9001  0.34
2020 Honap TP, Sankaranarayanan K, Schnorr SL, Ozga AT, Warinner C, Lewis CM. Biogeographic study of human gut-associated crAssphage suggests impacts from industrialization and recent expansion. Plos One. 15: e0226930. PMID 31940321 DOI: 10.1371/Journal.Pone.0226930  0.358
2019 Hagan RW, Hofman CA, Hübner A, Reinhard K, Schnorr S, Lewis CM, Sankaranarayanan K, Warinner CG. Comparison of extraction methods for recovering ancient microbial DNA from paleofeces. American Journal of Physical Anthropology. PMID 31785113 DOI: 10.1002/Ajpa.23978  0.319
2019 Schnorr SL, Hofman CA, Netshifhefhe SR, Duncan FD, Honap TP, Lesnik J, Lewis CM. Taxonomic features and comparisons of the gut microbiome from two edible fungus-farming termites (Macrotermes falciger; M. natalensis) harvested in the Vhembe district of Limpopo, South Africa. Bmc Microbiology. 19: 164. PMID 31315576 DOI: 10.1186/S12866-019-1540-5  0.352
2019 Patel NB, Obregón-Tito AJ, Tito RY, Trujillo-Villaroel O, Marin-Reyes L, Troncoso-Corzo L, Guija-Poma E, Lewis CM, Lawson PA. Citroniella saccharovorans gen. nov. sp. nov., a member of the family Peptoniphilaceae isolated from a human fecal sample from a coastal traditional community member. International Journal of Systematic and Evolutionary Microbiology. PMID 30767850 DOI: 10.1099/Ijsem.0.003287  0.314
2018 Ziesemer KA, Ramos-Madrigal J, Mann AE, Brandt BW, Sankaranarayanan K, Ozga AT, Hoogland M, Hofman CA, Salazar-García DC, Frohlich B, Milner GR, Stone AC, Aldenderfer M, Lewis CM, Hofman CL, et al. The efficacy of whole human genome capture on ancient dental calculus and dentin. American Journal of Physical Anthropology. PMID 30586168 DOI: 10.1002/Ajpa.23763  0.325
2018 Mann AE, Sabin S, Ziesemer K, Vågene ÅJ, Schroeder H, Ozga AT, Sankaranarayanan K, Hofman CA, Fellows Yates JA, Salazar-García DC, Frohlich B, Aldenderfer M, Hoogland M, Read C, Milner GR, ... ... Lewis CM, et al. Differential preservation of endogenous human and microbial DNA in dental calculus and dentin. Scientific Reports. 8: 9822. PMID 29959351 DOI: 10.1038/S41598-018-28091-9  0.332
2016 Schnorr SL, Sankaranarayanan K, Lewis CM, Warinner C. Insights into human evolution from ancient and contemporary microbiome studies. Current Opinion in Genetics & Development. 41: 14-26. PMID 27507098 DOI: 10.1016/J.Gde.2016.07.003  0.342
2016 Jeong C, Ozga AT, Witonsky DB, Malmström H, Edlund H, Hofman CA, Hagan RW, Jakobsson M, Lewis CM, Aldenderfer MS, Di Rienzo A, Warinner C. Long-term genetic stability and a high-altitude East Asian origin for the peoples of the high valleys of the Himalayan arc. Proceedings of the National Academy of Sciences of the United States of America. PMID 27325755 DOI: 10.1073/Pnas.1520844113  0.365
2016 Patel NB, Tito RY, Obregón-Tito AJ, O'Neal L, Trujillo-Villaroel O, Marin-Reyes L, Troncoso-Corzo L, Guija-Poma E, Lewis CM, Lawson PA. Peptoniphilus catoniae sp. nov. isolated from human fecal sample from a coastal traditional community in Peru. International Journal of Systematic and Evolutionary Microbiology. PMID 26907921 DOI: 10.1099/Ijsem.0.000985  0.312
2015 Sankaranarayanan K, Ozga AT, Warinner C, Tito RY, Obregon-Tito AJ, Xu J, Gaffney PM, Jervis LL, Cox D, Stephens L, Foster M, Tallbull G, Spicer P, Lewis CM. Gut Microbiome Diversity among Cheyenne and Arapaho Individuals from Western Oklahoma. Current Biology : Cb. PMID 26671671 DOI: 10.1016/J.Cub.2015.10.060  0.356
2015 Ziesemer KA, Mann AE, Sankaranarayanan K, Schroeder H, Ozga AT, Brandt BW, Zaura E, Waters-Rist A, Hoogland M, Salazar-García DC, Aldenderfer M, Speller C, Hendy J, Weston DA, MacDonald SJ, ... ... Lewis CM, et al. Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification. Scientific Reports. 5: 16498. PMID 26563586 DOI: 10.1038/Srep16498  0.327
2015 O'Neal L, Obregón-Tito AJ, Tito RY, Ozga AT, Polo SI, Lewis CM, Lawson PA. Clostridium amazonense sp. nov. an obliqately anaerobic bacterium isolated from a remote Amazonian community in Peru. Anaerobe. 35: 33-7. PMID 26123611 DOI: 10.1016/J.Anaerobe.2015.06.005  0.314
2015 Obregon-Tito AJ, Tito RY, Metcalf J, Sankaranarayanan K, Clemente JC, Ursell LK, Zech Xu Z, Van Treuren W, Knight R, Gaffney PM, Spicer P, Lawson P, Marin-Reyes L, Trujillo-Villarroel O, Foster M, ... ... Lewis CM, et al. Subsistence strategies in traditional societies distinguish gut microbiomes. Nature Communications. 6: 6505. PMID 25807110 DOI: 10.1038/Ncomms7505  0.344
2015 Warinner C, Lewis CM. Microbiome and Health in Past and Present Human Populations American Anthropologist. DOI: 10.1111/Aman.12367  0.332
2014 Cabana GS, Lewis CM, Tito RY, Covey RA, Cáceres AM, Cruz AF, Durand D, Housman G, Hulsey BI, Iannacone GC, López PW, Martínez R, Medina Á, Dávila OO, Pinto KP, et al. Population genetic structure of traditional populations in the Peruvian Central Andes and implications for South American population history. Human Biology. 86: 147-65. PMID 25836744 DOI: 10.13110/Humanbiology.86.3.0147  0.388
2014 Warinner C, Rodrigues JF, Vyas R, Trachsel C, Shved N, Grossmann J, Radini A, Hancock Y, Tito RY, Fiddyment S, Speller C, Hendy J, Charlton S, Luder HU, Salazar-García DC, ... ... Lewis CM, et al. Pathogens and host immunity in the ancient human oral cavity. Nature Genetics. 46: 336-44. PMID 24562188 DOI: 10.1038/Ng.2906  0.31
2013 Cleeland LM, Reichard MV, Tito RY, Reinhard KJ, Lewis CM. Clarifying Prehistoric Parasitism from a Complementary Morphological and Molecular Approach. Journal of Archaeological Science. 40: 3060-3066. PMID 23645967 DOI: 10.1016/J.Jas.2013.03.010  0.345
2013 Schlebusch CM, Lewis CM, Vahter M, Engström K, Tito RY, Obregón-Tito AJ, Huerta D, Polo SI, Medina ÁC, Brutsaert TD, Concha G, Jakobsson M, Broberg K. Possible positive selection for an arsenic-protective haplotype in humans. Environmental Health Perspectives. 121: 53-8. PMID 23070617 DOI: 10.1289/Ehp.1205504  0.371
2013 d'Alpoim Guedes J, Bestor TC, Carrasco D, Flad R, Fosse E, Herzfeld M, Lamberg-Karlovsky CC, Lewis CM, Liebmann M, Meadow R, Patterson N, Price M, Reiches M, Richardson S, Shattuck-Heidorn H, et al. Is poverty in our genes?: A critique of Ashraf and Galor, "The 'out of Africa' hypothesis, human genetic diversity, and comparative economic development," American Economic Review (forthcoming) Current Anthropology. 54: 71-79. DOI: 10.1086/669034  0.356
2011 Tito RY, Belknap SL, Sobolik KD, Ingraham RC, Cleeland LM, Lewis CM. Brief Communication: DNA from Early Holocene American Dog American Journal of Physical Anthropology. 145: 653-657. PMID 21541929 DOI: 10.1002/Ajpa.21526  0.393
2009 Lewis CM. Hierarchical modeling of genome-wide Short Tandem Repeat (STR) markers infers native American prehistory. American Journal of Physical Anthropology. 141: 281-289. PMID 19672848 DOI: 10.1002/Ajpa.21143  0.379
2009 Lewis CM. Difficulties in Rejecting a Local Ancestry with mtDNA Haplogroup Data in the South Central Andes Latin American Antiquity. 20: 76-90. DOI: 10.1017/S1045663500002522  0.376
2008 Tito RY, Macmil S, Wiley G, Najar F, Cleeland L, Qu C, Wang P, Romagne F, Leonard S, Ruiz AJ, Reinhard K, Roe BA, Lewis CM. Phylotyping and functional analysis of two ancient human microbiomes. Plos One. 3: e3703. PMID 19002248 DOI: 10.1371/Journal.Pone.0003703  0.375
2008 Verrelli BC, Lewis CM, Stone AC, Perry GH. Different selective pressures shape the molecular evolution of color vision in chimpanzee and human populations. Molecular Biology and Evolution. 25: 2735-43. PMID 18832077 DOI: 10.1093/Molbev/Msn220  0.374
2008 Lewis CM, Long JC. Native South American genetic structure and prehistory inferred from hierarchical modeling of mtDNA. Molecular Biology and Evolution. 25: 478-86. PMID 18222947 DOI: 10.1093/Molbev/Msm225  0.413
2007 Wang S, Lewis CM, Jakobsson M, Ramachandran S, Ray N, Bedoya G, Rojas W, Parra MV, Molina JA, Gallo C, Mazzotti G, Poletti G, Hill K, Hurtado AM, Labuda D, et al. Genetic variation and population structure in native Americans. Plos Genetics. 3: e185. PMID 18039031 DOI: 10.1371/Journal.Pgen.0030185  0.392
2007 Lewis CM, Lizárraga B, Tito RY, López PW, Iannacone GC, Medina A, Martínez R, Polo SI, De La Cruz AF, Cáceres AM, Stone AC. Mitochondrial DNA and the peopling of South America. Human Biology. 79: 159-78. PMID 18027812 DOI: 10.1353/Hub.2007.0031  0.393
2007 Lewis CM, Buikstra JE, Stone AC. Ancient DNA and genetic continuity in the south central Andes Latin American Antiquity. 18: 145-160. DOI: 10.2307/25063101  0.381
2005 Lewis CM, Tito RY, Lizárraga B, Stone AC. Land, language, and loci: mtDNA in Native Americans and the genetic history of Peru. American Journal of Physical Anthropology. 127: 351-60. PMID 15584069 DOI: 10.1002/Ajpa.20102  0.389
2002 Monsalve MV, Stone AC, Lewis CM, Rempel A, Richards M, Straathof D, Devine DV. Brief communication: molecular analysis of the Kwäday Dän Ts'finchi ancient remains found in a glacier in Canada. American Journal of Physical Anthropology. 119: 288-91. PMID 12365041 DOI: 10.1002/Ajpa.10116  0.348
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