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William Orsi, Ph.D. - Publications

Affiliations: 
2011 Biological Sciences Northeastern University, Boston, MA, United States 
Area:
Ecology Biology, Oceanography Biology, Microbiology Biology
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31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Mincer TJ, Bos RP, Zettler ER, Zhao S, Asbun AA, Orsi WD, Guzzetta VS, Amaral-Zettler LA. Sargasso Sea Vibrio bacteria: Underexplored potential pathovars in a perturbed habitat. Water Research. 120033. PMID 37244770 DOI: 10.1016/j.watres.2023.120033  0.355
2023 Coskun ÖK, Gomez-Saez GV, Beren M, Ozcan D, Hosgormez H, Einsiedl F, Orsi WD. Carbon metabolism and biogeography of candidate phylum " Bipolaricaulota" in geothermal environments of Biga Peninsula, Turkey. Frontiers in Microbiology. 14: 1063139. PMID 36910224 DOI: 10.3389/fmicb.2023.1063139  0.393
2021 Garber AI, Ramírez GA, McAllister SM, Orsi W, D'Hondt S. Cryptic metabolisms in anoxic subseafloor sediment. Environmental Microbiology Reports. PMID 34184398 DOI: 10.1111/1758-2229.12983  0.317
2020 Vuillemin A, Kerrigan Z, D'Hondt S, Orsi WD. Exploring the abundance, metabolic potential, and gene expression of subseafloor Chloroflexi in million-year-old oxic and anoxic abyssal clay. Fems Microbiology Ecology. PMID 33150943 DOI: 10.1093/femsec/fiaa223  0.31
2020 Vuillemin A, Vargas S, Coskun ÖK, Pockalny R, Murray RW, Smith DC, D'Hondt S, Orsi WD. Atribacteria Reproducing over Millions of Years in the Atlantic Abyssal Subseafloor. Mbio. 11. PMID 33024037 DOI: 10.1128/mBio.01937-20  0.309
2018 Kose SH, Grice K, Orsi WD, Ballal M, Coolen MJL. Metagenomics of pigmented and cholesterol gallstones: the putative role of bacteria. Scientific Reports. 8: 11218. PMID 30046045 DOI: 10.1038/S41598-018-29571-8  0.316
2018 Orsi WD. Ecology and evolution of seafloor and subseafloor microbial communities. Nature Reviews. Microbiology. PMID 29967420 DOI: 10.1038/s41579-018-0046-8  0.31
2018 Pichler M, Coskun ÖK, Ortega-Arbulú AS, Conci N, Wörheide G, Vargas S, Orsi WD. A 16S rRNA gene sequencing and analysis protocol for the Illumina MiniSeq platform. Microbiologyopen. e00611. PMID 29575567 DOI: 10.1002/mbo3.611  0.345
2018 Vuillemin A, Ariztegui D, Horn F, Kallmeyer J, Orsi WD. Microbial community composition along a 50,000 year lacustrine sediment sequence. Fems Microbiology Ecology. PMID 29471361 DOI: 10.1093/femsec/fiy029  0.358
2018 More KD, Orsi WD, Galy V, Giosan L, He L, Grice K, Coolen MJ. A 43 kyr record of protist communities and their response to oxygen minimum zone variability in the Northeastern Arabian Sea Earth and Planetary Science Letters. 496: 248-256. DOI: 10.1016/J.Epsl.2018.05.045  0.302
2017 Orsi WD, Wilken S, Del Campo J, Heger T, James E, Richards TA, Keeling PJ, Worden AZ, Santoro AE. Identifying protist consumers of photosynthetic picoeukaryotes in the surface ocean using stable isotope probing. Environmental Microbiology. PMID 29215213 DOI: 10.1111/1462-2920.14018  0.36
2017 Orsi WD, Richards TA, Francis WR. Predicted microbial secretomes and their target substrates in marine sediment. Nature Microbiology. PMID 29062087 DOI: 10.1038/S41564-017-0047-9  0.324
2014 Edgcomb VP, Bernhard JM, Summons RE, Orsi W, Beaudoin D, Visscher PT. Active eukaryotes in microbialites from Highborne Cay, Bahamas, and Hamelin Pool (Shark Bay), Australia. The Isme Journal. 8: 418-29. PMID 23924782 DOI: 10.1038/Ismej.2013.130  0.392
2014 Stoeck T, Filker S, Edgcomb V, Orsi W, Yakimov MM, Pachiadaki M, Breiner H, LaCono V, Stock A. Living at the Limits: Evidence for Microbial Eukaryotes Thriving under Pressure in Deep Anoxic, Hypersaline Habitats Advances in Ecology. 2014: 1-9. DOI: 10.1155/2014/532687  0.374
2013 Stock A, Edgcomb V, Orsi W, Filker S, Breiner HW, Yakimov MM, Stoeck T. Evidence for isolated evolution of deep-sea ciliate communities through geological separation and environmental selection. Bmc Microbiology. 13: 150. PMID 23834625 DOI: 10.1186/1471-2180-13-150  0.342
2013 Orsi W, Biddle JF, Edgcomb V. Deep sequencing of subseafloor eukaryotic rRNA reveals active Fungi across marine subsurface provinces. Plos One. 8: e56335. PMID 23418556 DOI: 10.1371/Journal.Pone.0056335  0.383
2013 Filker S, Stock A, Breiner HW, Edgcomb V, Orsi W, Yakimov MM, Stoeck T. Environmental selection of protistan plankton communities in hypersaline anoxic deep-sea basins, Eastern Mediterranean Sea. Microbiologyopen. 2: 54-63. PMID 23239531 DOI: 10.1002/mbo3.56  0.358
2013 Burgaud G, Woehlke S, Rédou V, Orsi W, Beaudoin D, Barbier G, Biddle JF, Edgcomb VP. Deciphering the presence and activity of fungal communities in marine sediments using a model estuarine system Aquatic Microbial Ecology. 70: 45-62. DOI: 10.3354/Ame01638  0.442
2012 Orsi W, Charvet S, Vd'ačný P, Bernhard JM, Edgcomb VP. Prevalence of partnerships between bacteria and ciliates in oxygen-depleted marine water columns. Frontiers in Microbiology. 3: 341. PMID 23049527 DOI: 10.3389/Fmicb.2012.00341  0.408
2012 Vd'ačný P, Bourland WA, Orsi W, Epstein SS, Foissner W. Genealogical analyses of multiple loci of litostomatean ciliates (Protista, Ciliophora, Litostomatea). Molecular Phylogenetics and Evolution. 65: 397-411. PMID 22789763 DOI: 10.1016/J.Ympev.2012.06.024  0.672
2012 Orsi W, Song YC, Hallam S, Edgcomb V. Effect of oxygen minimum zone formation on communities of marine protists. The Isme Journal. 6: 1586-601. PMID 22402396 DOI: 10.1038/ismej.2012.7  0.35
2012 Orsi W, Edgcomb V, Faria J, Foissner W, Fowle WH, Hohmann T, Suarez P, Taylor C, Taylor GT, Vd'acný P, Epstein SS. Class Cariacotrichea, a novel ciliate taxon from the anoxic Cariaco Basin, Venezuela. International Journal of Systematic and Evolutionary Microbiology. 62: 1425-33. PMID 21841005 DOI: 10.1099/Ijs.0.034710-0  0.63
2011 Vďačný P, Orsi W, Bourland WA, Shimano S, Epstein SS, Foissner W. Morphological and molecular phylogeny of dileptid and tracheliid ciliates: resolution at the base of the class Litostomatea (Ciliophora, Rhynchostomatia). European Journal of Protistology. 47: 295-313. PMID 21641780 DOI: 10.1016/J.Ejop.2011.04.006  0.623
2011 Edgcomb V, Orsi W, Bunge J, Jeon S, Christen R, Leslin C, Holder M, Taylor GT, Suarez P, Varela R, Epstein S. Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness. The Isme Journal. 5: 1344-56. PMID 21390079 DOI: 10.1038/Ismej.2011.6  0.679
2011 Orsi W, Edgcomb V, Jeon S, Leslin C, Bunge J, Taylor GT, Varela R, Epstein S. Protistan microbial observatory in the Cariaco Basin, Caribbean. II. Habitat specialization. The Isme Journal. 5: 1357-73. PMID 21390077 DOI: 10.1038/Ismej.2011.7  0.654
2011 Edgcomb V, Orsi W, Taylor GT, Vdacny P, Taylor C, Suarez P, Epstein S. Accessing marine protists from the anoxic Cariaco Basin. The Isme Journal. 5: 1237-41. PMID 21390076 DOI: 10.1038/Ismej.2011.10  0.616
2011 Vd'ačný P, Bourland WA, Orsi W, Epstein SS, Foissner W. Phylogeny and classification of the Litostomatea (Protista, Ciliophora), with emphasis on free-living taxa and the 18S rRNA gene. Molecular Phylogenetics and Evolution. 59: 510-22. PMID 21333743 DOI: 10.1016/J.Ympev.2011.02.016  0.672
2011 Edgcomb VP, Orsi W, Breiner HW, Stock A, Filker S, Yakimov MM, Stoeck T. Novel active kinetoplastids associated with hypersaline anoxic basins in the Eastern Mediterranean deep-sea Deep-Sea Research Part I: Oceanographic Research Papers. 58: 1040-1048. DOI: 10.1016/j.dsr.2011.07.003  0.428
2010 Vďačný P, Orsi W, Foissner W. Molecular and morphological evidence for a sister group relationship of the classes Armophorea and Litostomatea (Ciliophora, Intramacronucleata, Lamellicorticata infraphyl. nov.), with an account on basal litostomateans. European Journal of Protistology. 46: 298-309. PMID 20829002 DOI: 10.1016/J.Ejop.2010.07.002  0.456
2009 Stoeck T, Behnke A, Christen R, Amaral-Zettler L, Rodriguez-Mora MJ, Chistoserdov A, Orsi W, Edgcomb VP. Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities. Bmc Biology. 7: 72. PMID 19886985 DOI: 10.1186/1741-7007-7-72  0.402
2009 Edgcomb V, Orsi W, Leslin C, Epstein SS, Bunge J, Jeon S, Yakimov MM, Behnke A, Stoeck T. Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern Mediterranean Sea. Extremophiles : Life Under Extreme Conditions. 13: 151-67. PMID 19057844 DOI: 10.1007/S00792-008-0206-2  0.639
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