William Orsi, Ph.D. - Publications

Affiliations: 
2011 Biological Sciences Northeastern University, Boston, MA, United States 
Area:
Ecology Biology, Oceanography Biology, Microbiology Biology

29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Orsi WD, Jørgensen BB, Biddle JF. Transcriptional analysis of sulfate reducing and chemolithoautotrophic sulfur oxidizing bacteria in the deep subseafloor. Environmental Microbiology Reports. PMID 26991974 DOI: 10.1111/1758-2229.12387  0.44
2016 Orsi WD, Smith JM, Liu S, Liu Z, Sakamoto CM, Wilken S, Poirier C, Richards TA, Keeling PJ, Worden AZ, Santoro AE. Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean. The Isme Journal. PMID 26953597 DOI: 10.1038/Ismej.2016.20  0.44
2015 Klein F, Humphris SE, Guo W, Schubotz F, Schwarzenbach EM, Orsi WD. Fluid mixing and the deep biosphere of a fossil Lost City-type hydrothermal system at the Iberia Margin. Proceedings of the National Academy of Sciences of the United States of America. 112: 12036-41. PMID 26324888 DOI: 10.1073/Pnas.1504674112  0.44
2015 Engelhardt T, Orsi WD, Jørgensen BB. Viral activities and life cycles in deep subseafloor sediments. Environmental Microbiology Reports. 7: 868-73. PMID 26109514 DOI: 10.1111/1758-2229.12316  0.44
2015 Coolen MJ, Orsi WD. The transcriptional response of microbial communities in thawing Alaskan permafrost soils. Frontiers in Microbiology. 6: 197. PMID 25852660 DOI: 10.3389/fmicb.2015.00197  0.44
2015 Orsi WD, Smith JM, Wilcox HM, Swalwell JE, Carini P, Worden AZ, Santoro AE. Ecophysiology of uncultivated marine euryarchaea is linked to particulate organic matter. The Isme Journal. PMID 25615436 DOI: 10.1038/Ismej.2014.260  0.44
2015 Santoro AE, Dupont CL, Richter RA, Craig MT, Carini P, McIlvin MR, Yang Y, Orsi WD, Moran DM, Saito MA. Genomic and proteomic characterization of "Candidatus Nitrosopelagicus brevis": an ammonia-oxidizing archaeon from the open ocean. Proceedings of the National Academy of Sciences of the United States of America. 112: 1173-8. PMID 25587132 DOI: 10.1073/Pnas.1416223112  0.44
2014 Edgcomb VP, Bernhard JM, Summons RE, Orsi W, Beaudoin D, Visscher PT. Active eukaryotes in microbialites from Highborne Cay, Bahamas, and Hamelin Pool (Shark Bay), Australia. The Isme Journal. 8: 418-29. PMID 23924782 DOI: 10.1038/Ismej.2013.130  0.44
2014 Orcutt BN, LaRowe DE, Lloyd KG, Mills H, Orsi W, Reese BK, Sauvage J, Huber JA, Amend J. IODP deep biosphere research workshop report - A synthesis of recent investigations, and discussion of new research questions and drilling targets Scientific Drilling. 61-66. DOI: 10.5194/Sd-17-61-2014  0.44
2014 Orsi WD, Richards TA, Santoro AE. Cellular maintenance processes that potentially underpin the survival of subseafloor fungi over geological timescales Estuarine, Coastal and Shelf Science. DOI: 10.1016/J.Ecss.2015.04.009  0.44
2013 Stock A, Edgcomb V, Orsi W, Filker S, Breiner HW, Yakimov MM, Stoeck T. Evidence for isolated evolution of deep-sea ciliate communities through geological separation and environmental selection. Bmc Microbiology. 13: 150. PMID 23834625 DOI: 10.1186/1471-2180-13-150  0.44
2013 Orsi WD, Edgcomb VP, Christman GD, Biddle JF. Gene expression in the deep biosphere. Nature. 499: 205-8. PMID 23760485 DOI: 10.1038/Nature12230  0.44
2013 Coolen MJ, Orsi WD, Balkema C, Quince C, Harris K, Sylva SP, Filipova-Marinova M, Giosan L. Evolution of the plankton paleome in the Black Sea from the Deglacial to Anthropocene. Proceedings of the National Academy of Sciences of the United States of America. 110: 8609-14. PMID 23650351 DOI: 10.1073/Pnas.1219283110  0.44
2013 Orsi W, Biddle JF, Edgcomb V. Deep sequencing of subseafloor eukaryotic rRNA reveals active Fungi across marine subsurface provinces. Plos One. 8: e56335. PMID 23418556 DOI: 10.1371/Journal.Pone.0056335  0.44
2013 Filker S, Stock A, Breiner HW, Edgcomb V, Orsi W, Yakimov MM, Stoeck T. Environmental selection of protistan plankton communities in hypersaline anoxic deep-sea basins, Eastern Mediterranean Sea. Microbiologyopen. 2: 54-63. PMID 23239531 DOI: 10.1002/mbo3.56  0.44
2013 Burgaud G, Woehlke S, Rédou V, Orsi W, Beaudoin D, Barbier G, Biddle JF, Edgcomb VP. Deciphering the presence and activity of fungal communities in marine sediments using a model estuarine system Aquatic Microbial Ecology. 70: 45-62. DOI: 10.3354/Ame01638  0.44
2012 Orsi W, Charvet S, Vd'ačný P, Bernhard JM, Edgcomb VP. Prevalence of partnerships between bacteria and ciliates in oxygen-depleted marine water columns. Frontiers in Microbiology. 3: 341. PMID 23049527 DOI: 10.3389/Fmicb.2012.00341  0.44
2012 Vd'ačný P, Bourland WA, Orsi W, Epstein SS, Foissner W. Genealogical analyses of multiple loci of litostomatean ciliates (Protista, Ciliophora, Litostomatea). Molecular Phylogenetics and Evolution. 65: 397-411. PMID 22789763 DOI: 10.1016/J.Ympev.2012.06.024  0.44
2012 Orsi W, Song YC, Hallam S, Edgcomb V. Effect of oxygen minimum zone formation on communities of marine protists. The Isme Journal. 6: 1586-601. PMID 22402396 DOI: 10.1038/ismej.2012.7  0.44
2012 Orsi W, Edgcomb V, Faria J, Foissner W, Fowle WH, Hohmann T, Suarez P, Taylor C, Taylor GT, Vd'acný P, Epstein SS. Class Cariacotrichea, a novel ciliate taxon from the anoxic Cariaco Basin, Venezuela. International Journal of Systematic and Evolutionary Microbiology. 62: 1425-33. PMID 21841005 DOI: 10.1099/Ijs.0.034710-0  0.44
2011 Vďačný P, Orsi W, Bourland WA, Shimano S, Epstein SS, Foissner W. Morphological and molecular phylogeny of dileptid and tracheliid ciliates: resolution at the base of the class Litostomatea (Ciliophora, Rhynchostomatia). European Journal of Protistology. 47: 295-313. PMID 21641780 DOI: 10.1016/J.Ejop.2011.04.006  0.44
2011 Edgcomb V, Orsi W, Bunge J, Jeon S, Christen R, Leslin C, Holder M, Taylor GT, Suarez P, Varela R, Epstein S. Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness. The Isme Journal. 5: 1344-56. PMID 21390079 DOI: 10.1038/Ismej.2011.6  0.44
2011 Orsi W, Edgcomb V, Jeon S, Leslin C, Bunge J, Taylor GT, Varela R, Epstein S. Protistan microbial observatory in the Cariaco Basin, Caribbean. II. Habitat specialization. The Isme Journal. 5: 1357-73. PMID 21390077 DOI: 10.1038/Ismej.2011.7  0.44
2011 Edgcomb V, Orsi W, Taylor GT, Vdacny P, Taylor C, Suarez P, Epstein S. Accessing marine protists from the anoxic Cariaco Basin. The Isme Journal. 5: 1237-41. PMID 21390076 DOI: 10.1038/Ismej.2011.10  0.44
2011 Vd'ačný P, Bourland WA, Orsi W, Epstein SS, Foissner W. Phylogeny and classification of the Litostomatea (Protista, Ciliophora), with emphasis on free-living taxa and the 18S rRNA gene. Molecular Phylogenetics and Evolution. 59: 510-22. PMID 21333743 DOI: 10.1016/J.Ympev.2011.02.016  0.44
2011 Edgcomb VP, Orsi W, Breiner HW, Stock A, Filker S, Yakimov MM, Stoeck T. Novel active kinetoplastids associated with hypersaline anoxic basins in the Eastern Mediterranean deep-sea Deep-Sea Research Part I: Oceanographic Research Papers. 58: 1040-1048. DOI: 10.1016/j.dsr.2011.07.003  0.44
2010 Vďačný P, Orsi W, Foissner W. Molecular and morphological evidence for a sister group relationship of the classes Armophorea and Litostomatea (Ciliophora, Intramacronucleata, Lamellicorticata infraphyl. nov.), with an account on basal litostomateans. European Journal of Protistology. 46: 298-309. PMID 20829002 DOI: 10.1016/J.Ejop.2010.07.002  0.44
2009 Stoeck T, Behnke A, Christen R, Amaral-Zettler L, Rodriguez-Mora MJ, Chistoserdov A, Orsi W, Edgcomb VP. Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities. Bmc Biology. 7: 72. PMID 19886985 DOI: 10.1186/1741-7007-7-72  0.44
2009 Edgcomb V, Orsi W, Leslin C, Epstein SS, Bunge J, Jeon S, Yakimov MM, Behnke A, Stoeck T. Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern Mediterranean Sea. Extremophiles : Life Under Extreme Conditions. 13: 151-67. PMID 19057844 DOI: 10.1007/S00792-008-0206-2  0.44
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