Rui Yi, Ph.D. - Publications

Affiliations: 
2004 Duke University, Durham, NC 
Area:
Cell Biology, Molecular Biology

35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wang J, Lee JE, Riemondy K, Yu Y, Marquez SM, Lai EC, Yi R. XPO5 promotes primary miRNA processing independently of RanGTP. Nature Communications. 11: 1845. PMID 32296071 DOI: 10.1038/S41467-020-15598-X  0.644
2020 Bjerke GA, Yi R. Integrated analysis of directly captured microRNA targets reveals the impact of microRNAs on mammalian transcriptome. Rna (New York, N.Y.). PMID 31900330 DOI: 10.1261/Rna.073635.119  0.683
2019 Fan X, Bjerke GA, Riemondy K, Wang L, Yi R. A basal-enriched microRNA is required for prostate tumorigenesis in a Pten knockout mouse model. Molecular Carcinogenesis. PMID 31512783 DOI: 10.1002/Mc.23112  0.498
2019 Shukla S, Bjerke GA, Muhlrad D, Yi R, Parker R. The RNase PARN Controls the Levels of Specific miRNAs that Contribute to p53 Regulation. Molecular Cell. PMID 30770239 DOI: 10.1016/J.Molcel.2019.01.010  0.626
2019 Wang D, Yi R. Is it time to take R(epressive) out of PRC1? Genes & Development. 33: 4-5. PMID 30602437 DOI: 10.1101/Gad.322651.118  0.351
2018 Fan X, Wang D, Burgmaier JE, Teng Y, Romano RA, Sinha S, Yi R. Single Cell and Open Chromatin Analysis Reveals Molecular Origin of Epidermal Cells of the Skin. Developmental Cell. PMID 30220568 DOI: 10.1016/J.Devcel.2018.08.010  0.336
2018 Hoefert JE, Bjerke GA, Wang D, Yi R. The microRNA-200 family coordinately regulates cell adhesion and proliferation in hair morphogenesis. The Journal of Cell Biology. PMID 29602800 DOI: 10.1083/Jcb.201708173  0.645
2017 Yi R. Mechanisms of Quiescent Hair Follicle Stem Cell Regulation. Stem Cells (Dayton, Ohio). PMID 28856849 DOI: 10.1002/Stem.2696  0.319
2016 Latil M, Nassar D, Beck B, Boumahdi S, Wang L, Brisebarre A, Dubois C, Nkusi E, Lenglez S, Checinska A, Vercauteren Drubbel A, Devos M, Declercq W, Yi R, Blanpain C. Cell-Type-Specific Chromatin States Differentially Prime Squamous Cell Carcinoma Tumor-Initiating Cells for Epithelial to Mesenchymal Transition. Cell Stem Cell. PMID 27889319 DOI: 10.1016/J.Stem.2016.10.018  0.315
2016 Yi R, Li Y, Wang FL, Miao G, Qi RM, Zhao YY. MicroRNAs as diagnostic and prognostic biomarkers in colorectal cancer. World Journal of Gastrointestinal Oncology. 8: 330-40. PMID 27096028 DOI: 10.4251/wjgo.v8.i4.330  0.569
2016 Bennett CG, Riemondy K, Chapnick DA, Bunker E, Liu X, Kuersten S, Yi R. Genome-wide analysis of Musashi-2 targets reveals novel functions in governing epithelial cell migration. Nucleic Acids Research. PMID 27034466 DOI: 10.1093/Nar/Gkw207  0.404
2016 Rezza A, Wang Z, Sennett R, Qiao W, Wang D, Heitman N, Mok KW, Clavel C, Yi R, Zandstra P, Ma'ayan A, Rendl M. Signaling Networks among Stem Cell Precursors, Transit-Amplifying Progenitors, and their Niche in Developing Hair Follicles. Cell Reports. PMID 27009580 DOI: 10.1016/J.Celrep.2016.02.078  0.329
2016 Wang L, Siegenthaler JA, Dowell RD, Yi R. Foxc1 reinforces quiescence in self-renewing hair follicle stem cells. Science (New York, N.Y.). 351: 613-7. PMID 26912704 DOI: 10.1126/Science.Aad5440  0.304
2015 Riemondy K, Wang XJ, Torchia EC, Roop DR, Yi R. MicroRNA-203 represses selection and expansion of oncogenic Hras transformed tumor initiating cells. Elife. 4. PMID 26203562 DOI: 10.7554/Elife.07004  0.487
2015 Riemondy K, Wang X, Torchia EC, Roop DR, Yi R. Author response: MicroRNA-203 represses selection and expansion of oncogenic Hras transformed tumor initiating cells Elife. DOI: 10.7554/Elife.07004.026  0.33
2014 Lee JE, Yi R. Highly efficient ligation of small RNA molecules for microRNA quantitation by high-throughput sequencing. Journal of Visualized Experiments : Jove. e52095. PMID 25490151 DOI: 10.3791/52095  0.649
2014 Riemondy K, Hoefert JE, Yi R. Not miR-ly micromanagers: the functions and regulatory networks of microRNAs in mammalian skin. Wiley Interdisciplinary Reviews. Rna. 5: 849-65. PMID 25044412 DOI: 10.1002/Wrna.1250  0.649
2014 Wang L, Yi R. 3'UTRs take a long shot in the brain. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 36: 39-45. PMID 24115048 DOI: 10.1002/Bies.201300100  0.49
2013 Zhang Z, Lee JE, Riemondy K, Anderson EM, Yi R. High-efficiency RNA cloning enables accurate quantification of miRNA expression by deep sequencing. Genome Biology. 14: R109. PMID 24098942 DOI: 10.1186/Gb-2013-14-10-R109  0.568
2013 Wang D, Zhang Z, O'Loughlin E, Wang L, Fan X, Lai EC, Yi R. MicroRNA-205 controls neonatal expansion of skin stem cells by modulating the PI(3)K pathway. Nature Cell Biology. 15: 1153-63. PMID 23974039 DOI: 10.1038/Ncb2827  0.502
2013 Jackson SJ, Zhang Z, Feng D, Flagg M, O'Loughlin E, Wang D, Stokes N, Fuchs E, Yi R. Rapid and widespread suppression of self-renewal by microRNA-203 during epidermal differentiation. Development (Cambridge, England). 140: 1882-91. PMID 23571213 DOI: 10.1242/Dev.089649  0.568
2013 Wang L, Dowell RD, Yi R. Genome-wide maps of polyadenylation reveal dynamic mRNA 3'-end formation in mammalian cell lineages. Rna (New York, N.Y.). 19: 413-25. PMID 23325109 DOI: 10.1261/Rna.035360.112  0.49
2012 Wang D, Zhang Z, O'Loughlin E, Lee T, Houel S, O'Carroll D, Tarakhovsky A, Ahn NG, Yi R. Quantitative functions of Argonaute proteins in mammalian development. Genes & Development. 26: 693-704. PMID 22474261 DOI: 10.1101/Gad.182758.111  0.55
2012 Yi R, Fuchs E. A miR image of stem cells and their lineages. Current Topics in Developmental Biology. 99: 175-99. PMID 22365739 DOI: 10.1016/B978-0-12-387038-4.00007-0  0.454
2011 Yi R, Fuchs E. MicroRNAs and their roles in mammalian stem cells. Journal of Cell Science. 124: 1775-83. PMID 21576351 DOI: 10.1242/Jcs.069104  0.632
2010 Yi R, Fuchs E. MicroRNA-mediated control in the skin. Cell Death and Differentiation. 17: 229-35. PMID 19609273 DOI: 10.1038/Cdd.2009.92  0.558
2009 Yi R, Pasolli HA, Landthaler M, Hafner M, Ojo T, Sheridan R, Sander C, O'Carroll D, Stoffel M, Tuschl T, Fuchs E. DGCR8-dependent microRNA biogenesis is essential for skin development. Proceedings of the National Academy of Sciences of the United States of America. 106: 498-502. PMID 19114655 DOI: 10.1073/Pnas.0810766105  0.529
2008 Yi R, Poy MN, Stoffel M, Fuchs E. A skin microRNA promotes differentiation by repressing 'stemness'. Nature. 452: 225-9. PMID 18311128 DOI: 10.1038/Nature06642  0.453
2006 Yi R, O'Carroll D, Pasolli HA, Zhang Z, Dietrich FS, Tarakhovsky A, Fuchs E. Morphogenesis in skin is governed by discrete sets of differentially expressed microRNAs. Nature Genetics. 38: 356-62. PMID 16462742 DOI: 10.1038/Ng1744  0.634
2005 Yi R, Doehle BP, Qin Y, Macara IG, Cullen BR. Overexpression of exportin 5 enhances RNA interference mediated by short hairpin RNAs and microRNAs. Rna (New York, N.Y.). 11: 220-6. PMID 15613540 DOI: 10.1261/Rna.7233305  0.779
2005 Zeng Y, Yi R, Cullen BR. Recognition and cleavage of primary microRNA precursors by the nuclear processing enzyme Drosha. The Embo Journal. 24: 138-48. PMID 15565168 DOI: 10.1038/Sj.Emboj.7600491  0.576
2003 Yi R, Qin Y, Macara IG, Cullen BR. Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs. Genes & Development. 17: 3011-6. PMID 14681208 DOI: 10.1101/Gad.1158803  0.732
2003 Zeng Y, Yi R, Cullen BR. MicroRNAs and small interfering RNAs can inhibit mRNA expression by similar mechanisms. Proceedings of the National Academy of Sciences of the United States of America. 100: 9779-84. PMID 12902540 DOI: 10.1073/Pnas.1630797100  0.639
2002 Yi R, Bogerd HP, Wiegand HL, Cullen BR. Both ran and importins have the ability to function as nuclear mRNA export factors. Rna (New York, N.Y.). 8: 180-7. PMID 11911364 DOI: 10.1017/S1355838202012384  0.481
2002 Yi R, Bogerd HP, Cullen BR. Recruitment of the Crm1 nuclear export factor is sufficient to induce cytoplasmic expression of incompletely spliced human immunodeficiency virus mRNAs. Journal of Virology. 76: 2036-42. PMID 11836381 DOI: 10.1128/Jvi.76.5.2036-2042.2002  0.501
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