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Kangling Zhang - Publications

Affiliations: 
Chemistry University of Pacific 
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55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zhang K, Sowers ML, Cherryhomes EI, Singh VK, Mishra A, Restrepo BI, Khan A, Jagannath C. Sirtuin-dependent metabolic and epigenetic regulation of macrophages during tuberculosis. Frontiers in Immunology. 14: 1121495. PMID 36993975 DOI: 10.3389/fimmu.2023.1121495  0.306
2022 Sowers ML, Tang H, Singh VK, Khan A, Mishra A, Restrepo BI, Jagannath C, Zhang K. Multi-OMICs analysis reveals metabolic and epigenetic changes associated with macrophage polarization. The Journal of Biological Chemistry. 102418. PMID 36030823 DOI: 10.1016/j.jbc.2022.102418  0.361
2021 Patil NY, Tang H, Rus I, Zhang K, Joshi AD. Decoding cinnabarinic acid specific stanniocalcin 2 induction by aryl hydrocarbon receptor. Molecular Pharmacology. PMID 34764210 DOI: 10.1124/molpharm.121.000376  0.353
2018 Mishra A, Roy F, Dou Y, Zhang K, Tang H, Fletcher HM. Role of Acetyltransferase in Gingipain Biogenesis in . Journal of Bacteriology. PMID 30249709 DOI: 10.1128/Jb.00385-18  0.315
2017 Ren Y, Choi E, Zhang K, Chen Y, Ye S, Deng X, Zhang K, Bao X. Detection of Nuclear Protein Profile Changes by Human Metapneumovirus M2-2 Protein Using Quantitative Differential Proteomics. Vaccines. 5. PMID 29207503 DOI: 10.3390/Vaccines5040045  0.302
2017 Zhang K, Xu P, Sowers JL, Machuca DF, Mirfattah B, Herring J, Tang H, Chen Y, Tian B, Brasier AR, Sowers LC. Proteome analysis of hypoxic glioblastoma cells reveals sequential metabolic adaptation  of one-carbon metabolic pathways. Molecular & Cellular Proteomics : McP. PMID 28874504 DOI: 10.1074/Mcp.Ra117.000154  0.317
2016 Mirfattah B, Herring J, Tang H, Zhang K. Probes and targets of DNA methylation and demethylation in drug development. Current Topics in Medicinal Chemistry. PMID 27848896 DOI: 10.2174/1568026617666161116143828  0.454
2016 Kim SY, Sim CK, Zhang Q, Tang H, Brunmeir R, Pan H, Karnani N, Han W, Zhang K, Xu F. An Alternative Strategy for Pan-acetyl-lysine Antibody Generation. Plos One. 11: e0162528. PMID 27606599 DOI: 10.1371/Journal.Pone.0162528  0.325
2016 Tang H, Tian B, Brasier AR, Sowers LC, Zhang K. Measurement of Histone Methylation Dynamics by One-Carbon Metabolic Isotope Labeling and High-energy Collisional Dissociation Methylation Signature Ion Detection. Scientific Reports. 6: 31537. PMID 27530234 DOI: 10.1038/Srep31537  0.539
2016 Kim SY, Sim CK, Tang H, Han W, Zhang K, Xu F. Acetylome study in mouse adipocytes identifies targets of SIRT1 deacetylation in chromatin organization and RNA processing. Archives of Biochemistry and Biophysics. PMID 27021582 DOI: 10.1016/J.Abb.2016.03.025  0.456
2015 Kim SY, Sim CK, Tang H, Han W, Zhang K, Xu F. Acetylome Analysis Identifies SIRT1 Targets in mRNA-Processing and Chromatin-Remodeling in Mouse Liver. Plos One. 10: e0140619. PMID 26468954 DOI: 10.1371/Journal.Pone.0140619  0.372
2015 Sowers J, Mirfattah B, Xu P, Tang H, Park IY, Walker C, Wu P, Laezza F, Sowers LC, Zhang K. Quantification of histone modifications by parallel-reaction-monitoring (PRM) - a method validation. Analytical Chemistry. PMID 26356480 DOI: 10.1021/Acs.Analchem.5B02615  0.583
2015 Nicholas D, Tang H, Zhang Q, Rudra J, Xu F, Langridge W, Zhang K. Quantitative proteomics reveals a role for epigenetic reprogramming during human monocyte differentiation. Molecular & Cellular Proteomics : McP. 14: 15-29. PMID 25316709 DOI: 10.1074/Mcp.M113.035089  0.538
2014 Tang H, Fang H, Yin E, Brasier AR, Sowers LC, Zhang K. Multiplexed parallel reaction monitoring targeting histone modifications on the QExactive mass spectrometer. Analytical Chemistry. 86: 5526-34. PMID 24823915 DOI: 10.1021/Ac500972X  0.608
2014 Xiao D, Dasgupta C, Chen M, Zhang K, Buchholz J, Xu Z, Zhang L. Inhibition of DNA methylation reverses norepinephrine-induced cardiac hypertrophy in rats. Cardiovascular Research. 101: 373-82. PMID 24272874 DOI: 10.1093/Cvr/Cvt264  0.32
2012 Qian W, Miki D, Zhang H, Liu Y, Zhang X, Tang K, Kan Y, La H, Li X, Li S, Zhu X, Shi X, Zhang K, Pontes O, Chen X, et al. A histone acetyltransferase regulates active DNA demethylation in Arabidopsis. Science (New York, N.Y.). 336: 1445-8. PMID 22700931 DOI: 10.1126/Science.1219416  0.453
2012 Zhang K, Schrag M, Crofton A, Trivedi R, Vinters H, Kirsch W. Targeted proteomics for quantification of histone acetylation in Alzheimer's disease. Proteomics. 12: 1261-8. PMID 22577027 DOI: 10.1002/Pmic.201200010  0.516
2012 Liao Y, Mirshahidi H, Zhang K, Mirshahidi S, Williamson S, Hsueh C. Abstract 2663: Phase I study of azacitidine and cisplatin in patients with advanced head and neck or non-small cell lung cancer Cancer Research. 72: 2663-2663. DOI: 10.1158/1538-7445.Am2012-2663  0.315
2011 He YF, Li BZ, Li Z, Liu P, Wang Y, Tang Q, Ding J, Jia Y, Chen Z, Li L, Sun Y, Li X, Dai Q, Song CX, Zhang K, et al. Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA. Science (New York, N.Y.). 333: 1303-7. PMID 21817016 DOI: 10.1126/Science.1210944  0.392
2011 Xiong L, Darwanto A, Sharma S, Herring J, Hu S, Filippova M, Filippov V, Wang Y, Chen CS, Duerksen-Hughes PJ, Sowers LC, Zhang K. Mass spectrometric studies on epigenetic interaction networks in cell differentiation. The Journal of Biological Chemistry. 286: 13657-68. PMID 21335548 DOI: 10.1074/Jbc.M110.204800  0.497
2011 Tan F, Zhang K, Mujahid H, Verma DP, Peng Z. Differential histone modification and protein expression associated with cell wall removal and regeneration in rice (Oryza sativa). Journal of Proteome Research. 10: 551-63. PMID 20958091 DOI: 10.1021/Pr100748E  0.389
2011 Zhang K, Haynes TAS, Filippova M, Filippov V, Duerksen-Hughes PJ. Quantification of ceramide levels in mammalian cells by high performance liquid chromatography coupled to tandem mass spectrometry with multiple-reaction-monitoring mode (HPLC-MS/MS-MRM) Analytical Methods. 3: 1193-1197. DOI: 10.1039/C1Ay05022B  0.343
2010 Darwanto A, Curtis MP, Schrag M, Kirsch W, Liu P, Xu G, Neidigh JW, Zhang K. A modified "cross-talk" between histone H2B Lys-120 ubiquitination and H3 Lys-79 methylation. The Journal of Biological Chemistry. 285: 21868-76. PMID 20442396 DOI: 10.1074/Jbc.M110.126813  0.578
2009 Hu JL, Zhou BO, Zhang RR, Zhang KL, Zhou JQ, Xu GL. The N-terminus of histone H3 is required for de novo DNA methylation in chromatin Proceedings of the National Academy of Sciences of the United States of America. 106: 22187-22192. PMID 20018712 DOI: 10.1073/Pnas.0905767106  0.575
2009 Liu B, Lin Y, Darwanto A, Song X, Xu G, Zhang K. Identification and characterization of propionylation at histone H3 lysine 23 in mammalian cells. The Journal of Biological Chemistry. 284: 32288-95. PMID 19801601 DOI: 10.1074/Jbc.M109.045856  0.572
2009 Lin YH, Kakadia PM, Chen Y, Li YQ, Deshpande AJ, Buske C, Zhang KL, Zhang Y, Xu GL, Bohlander SK. Global reduction of the epigenetic H3K79 methylation mark and increased chromosomal instability in CALM-AF10-positive leukemias. Blood. 114: 651-8. PMID 19443658 DOI: 10.1182/Blood-2009-03-209395  0.424
2008 Horwitz GA, Zhang K, McBrian MA, Grunstein M, Kurdistani SK, Berk AJ. Adenovirus small e1a alters global patterns of histone modification. Science (New York, N.Y.). 321: 1084-5. PMID 18719283 DOI: 10.1126/Science.1155544  0.48
2008 Peng W, Togawa C, Zhang K, Kurdistani SK. Regulators of cellular levels of histone acetylation in Saccharomyces cerevisiae. Genetics. 179: 277-89. PMID 18493053 DOI: 10.1534/Genetics.107.085068  0.545
2008 Haynes TA, Duerksen-Hughes PJ, Filippova M, Filippov V, Zhang K. C18 ceramide analysis in mammalian cells employing reversed-phase high-performance liquid chromatography tandem mass spectrometry. Analytical Biochemistry. 378: 80-6. PMID 18423390 DOI: 10.1016/J.Ab.2008.03.045  0.31
2008 Zhang K. Characterization of acetylation of Saccharomyces cerevisiae H2B by mass spectrometry International Journal of Mass Spectrometry. 278: 89-94. DOI: 10.1016/J.Ijms.2008.08.018  0.348
2008 Zhang K. Qualitative and quantitative analysis of lysine acetylation and methylation in yeast histone H3 International Journal of Mass Spectrometry. 269: 101-111. DOI: 10.1016/J.Ijms.2007.09.010  0.549
2007 Zhang K, Sridhar VV, Zhu J, Kapoor A, Zhu JK. Distinctive core histone post-translational modification patterns in Arabidopsis thaliana. Plos One. 2: e1210. PMID 18030344 DOI: 10.1371/Journal.Pone.0001210  0.518
2007 Xu F, Zhang Q, Zhang K, Xie W, Grunstein M. Sir2 deacetylates histone H3 lysine 56 to regulate telomeric heterochromatin structure in yeast. Molecular Cell. 27: 890-900. PMID 17889663 DOI: 10.1016/J.Molcel.2007.07.021  0.514
2007 Zhang Q, Zhang K, Zou Y, Perna A, Wang Y. A quantitative study on the in vitro and in vivo acetylation of high mobility group A1 proteins. Journal of the American Society For Mass Spectrometry. 18: 1569-78. PMID 17627840 DOI: 10.1016/J.Jasms.2007.05.020  0.481
2007 Sridhar VV, Kapoor A, Zhang K, Zhu J, Zhou T, Hasegawa PM, Bressan RA, Zhu JK. Control of DNA methylation and heterochromatic silencing by histone H2B deubiquitination. Nature. 447: 735-8. PMID 17554311 DOI: 10.1038/Nature05864  0.565
2007 Han J, Zhou H, Horazdovsky B, Zhang K, Xu RM, Zhang Z. Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication. Science (New York, N.Y.). 315: 653-5. PMID 17272723 DOI: 10.1126/Science.1133234  0.474
2007 Faiola F, Wu YT, Pan S, Zhang K, Farina A, Martinez E. Max is acetylated by p300 at several nuclear localization residues. The Biochemical Journal. 403: 397-407. PMID 17217336 DOI: 10.1042/Bj20061593  0.428
2007 Peng W, Zhang K, Togawa CI, Kurdistani SK. Identification of regulators of global histone acetylation in yeast Saccharomyces cerevisiae The Faseb Journal. 21. DOI: 10.1096/Fasebj.21.5.A291-B  0.524
2006 Zhang K. From purification of large amounts of phospho-compounds (nucleotides) to enrichment of phospho-peptides using anion-exchanging resin Analytical Biochemistry. 357: 225-231. PMID 16919592 DOI: 10.1016/J.Ab.2006.07.001  0.344
2006 Millar CB, Xu F, Zhang K, Grunstein M. Acetylation of H2AZ Lys 14 is associated with genome-wide gene activity in yeast. Genes & Development. 20: 711-22. PMID 16543223 DOI: 10.1101/Gad.1395506  0.479
2005 Faiola F, Liu X, Lo S, Pan S, Zhang K, Lymar E, Farina A, Martinez E. Dual regulation of c-Myc by p300 via acetylation-dependent control of Myc protein turnover and coactivation of Myc-induced transcription. Molecular and Cellular Biology. 25: 10220-34. PMID 16287840 DOI: 10.1128/Mcb.25.23.10220-10234.2005  0.381
2005 Serafin SV, Maranan R, Zhang K, Morton TH. Mass spectrometric differentiation of linear peptides composed of L-amino acids from isomers containing one D-amino acid residue. Analytical Chemistry. 77: 5480-7. PMID 16131056 DOI: 10.1021/Ac050490J  0.322
2005 Zhang K, Faiola F, Martinez E. Six lysine residues on c-Myc are direct substrates for acetylation by p300. Biochemical and Biophysical Research Communications. 336: 274-80. PMID 16126174 DOI: 10.1016/J.Bbrc.2005.08.075  0.442
2005 Shahbazian MD, Zhang K, Grunstein M. Histone H2B ubiquitylation controls processive methylation but not monomethylation by Dot1 and Set1. Molecular Cell. 19: 271-7. PMID 16039595 DOI: 10.1016/J.Molcel.2005.06.010  0.572
2005 Xu F, Zhang K, Grunstein M. Acetylation in histone H3 globular domain regulates gene expression in yeast. Cell. 121: 375-85. PMID 15882620 DOI: 10.1016/J.Cell.2005.03.011  0.548
2005 Zhang K, Tang J, Jones PR. Qualitative and Quantitative Analysis of Histone Acetylation by Mass Spectrometry Current Pharmaceutical Analysis. 1: 319-327. DOI: 10.2174/157341205774597878  0.531
2004 Churikov D, Siino J, Svetlova M, Zhang K, Gineitis A, Morton Bradbury E, Zalensky A. Novel human testis-specific histone H2B encoded by the interrupted gene on the X chromosome. Genomics. 84: 745-56. PMID 15475252 DOI: 10.1016/J.Ygeno.2004.06.001  0.44
2004 Zhang K, Siino JS, Jones PR, Yau PM, Bradbury EM. A mass spectrometric "Western blot" to evaluate the correlations between histone methylation and histone acetylation. Proteomics. 4: 3765-75. PMID 15378694 DOI: 10.1002/Pmic.200400819  0.765
2004 Serafin SV, Zhang K, Aurelio L, Hughes AB, Morton TH. Decomposition of protonated threonine, its stereoisomers, and its homologues in the gas phase: evidence for internal backside displacement. Organic Letters. 6: 1561-4. PMID 15128236 DOI: 10.1021/Ol049700P  0.302
2004 Zhang K, Yau PM, Chandrasekhar B, New R, Kondrat R, Imai BS, Bradbury ME. Differentiation between peptides containing acetylated or tri-methylated lysines by mass spectrometry: an application for determining lysine 9 acetylation and methylation of histone H3. Proteomics. 4: 1-10. PMID 14730666 DOI: 10.1002/Pmic.200300503  0.768
2003 Kim S, Mollet JC, Dong J, Zhang K, Park SY, Lord EM. Chemocyanin, a small basic protein from the lily stigma, induces pollen tube chemotropism. Proceedings of the National Academy of Sciences of the United States of America. 100: 16125-30. PMID 14671326 DOI: 10.1073/Pnas.2533800100  0.324
2003 Zhang K, Tang H. Analysis of core histones by liquid chromatography-mass spectrometry and peptide mapping. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 783: 173-9. PMID 12450536 DOI: 10.1016/S1570-0232(02)00631-1  0.593
2002 Zhang K, Williams KE, Huang L, Yau P, Siino JS, Bradbury EM, Jones PR, Minch MJ, Burlingame AL. Histone acetylation and deacetylation: identification of acetylation and methylation sites of HeLa histone H4 by mass spectrometry. Molecular & Cellular Proteomics : McP. 1: 500-8. PMID 12239278 DOI: 10.1074/Mcp.M200031-Mcp200  0.771
2002 Wang Y, Vivekananda S, Zhang K. ESI-MS/MS for the differentiation of diastereomeric pyrimidine glycols in mononucleosides. Analytical Chemistry. 74: 4505-12. PMID 12236362 DOI: 10.1021/Ac025602A  0.368
2002 Zhang K, Tang H, Huang L, Blankenship JW, Jones PR, Xiang F, Yau PM, Burlingame AL. Identification of acetylation and methylation sites of histone H3 from chicken erythrocytes by high-accuracy matrix-assisted laser desorption ionization-time-of-flight, matrix-assisted laser desorption ionization-postsource decay, and nanoelectrospray ionization tandem mass spectrometry. Analytical Biochemistry. 306: 259-69. PMID 12123664 DOI: 10.1006/Abio.2002.5719  0.763
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