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Collin M. Timm, Ph.D. - Publications

Affiliations: 
2013 Chemical Engineering University of Wisconsin, Madison, Madison, WI 
Area:
Chemical Engineering, Virology Biology
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Timm AC, Brensinger B, Hart M, Timm C, Karig D. Screening microbiota for effects on host tissues. Biotechnology and Bioengineering. PMID 36829297 DOI: 10.1002/bit.28363  0.686
2021 Carper DL, Weston DJ, Barde A, Timm CM, Lu TY, Burdick LH, Jawdy SS, Klingeman DM, Robeson MS, Veach AM, Cregger MA, Kalluri UC, Schadt CW, Podar M, Doktycz MJ, et al. Cultivating the Bacterial Microbiota of Roots. Msystems. e0130620. PMID 34156297 DOI: 10.1128/mSystems.01306-20  0.378
2021 Wang J, Carper DL, Burdick LH, Shrestha HK, Appidi MR, Abraham PE, Timm CM, Hettich RL, Pelletier DA, Doktycz MJ. Formation, characterization and modeling of emergent synthetic microbial communities. Computational and Structural Biotechnology Journal. 19: 1917-1927. PMID 33995895 DOI: 10.1016/j.csbj.2021.03.034  0.384
2019 Henning JA, Weston DJ, Pelletier DA, Timm CM, Jawdy SS, Classen AT. Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways. American Journal of Botany. PMID 31657872 DOI: 10.1002/Ajb2.1373  0.333
2019 Uehling JK, Entler MR, Meredith HR, Millet LJ, Timm CM, Aufrecht JA, Bonito GM, Engle NL, Labbé JL, Doktycz MJ, Retterer ST, Spatafora JW, Stajich JE, Tschaplinski TJ, Vilgalys RJ. Microfluidics and Metabolomics Reveal Symbiotic Bacterial-Fungal Interactions Between and Include Metabolite Exchange. Frontiers in Microbiology. 10: 2163. PMID 31632357 DOI: 10.3389/Fmicb.2019.02163  0.338
2018 Timm CM, Lloyd EP, Egan A, Mariner R, Karig D. Direct Growth of Bacteria in Headspace Vials Allows for Screening of Volatiles by Gas Chromatography Mass Spectrometry. Frontiers in Microbiology. 9: 491. PMID 29662472 DOI: 10.3389/Fmicb.2018.00491  0.335
2017 Cabugao KG, Timm CM, Carrell AA, Childs J, Lu TS, Pelletier DA, Weston DJ, Norby RJ. Root and Rhizosphere Bacterial Phosphatase Activity Varies with Tree Species and Soil Phosphorus Availability in Puerto Rico Tropical Forest. Frontiers in Plant Science. 8: 1834. PMID 29163572 DOI: 10.3389/Fpls.2017.01834  0.318
2016 Hansen RR, Timm AC, Timm CM, Bible AN, Morrell-Falvey JL, Pelletier DA, Simpson ML, Doktycz MJ, Retterer ST. Correction: Stochastic Assembly of Bacteria in Microwell Arrays Reveals the Importance of Confinement in Community Development. Plos One. 11: e0160135. PMID 27441627 DOI: 10.1371/journal.pone.0160135  0.665
2016 Timm CM, Pelletier DA, Jawdy SS, Gunter LE, Henning JA, Engle N, Aufrecht J, Gee E, Nookaew I, Yang Z, Lu TY, Tschaplinski TJ, Doktycz MJ, Tuskan GA, Weston DJ. Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System. Frontiers in Plant Science. 7: 497. PMID 27200001 DOI: 10.3389/Fpls.2016.00497  0.417
2016 Hansen RH, Timm AC, Timm CM, Bible AN, Morrell-Falvey JL, Pelletier DA, Simpson ML, Doktycz MJ, Retterer ST. Stochastic Assembly of Bacteria in Microwell Arrays Reveals the Importance of Confinement in Community Development. Plos One. 11: e0155080. PMID 27152511 DOI: 10.1371/Journal.Pone.0155080  0.685
2015 Timm CM, Hansen RR, Doktycz MJ, Retterer ST, Pelletier DA. Microstencils to generate defined, multi-species patterns of bacteria. Biomicrofluidics. 9: 064103. PMID 26594264 DOI: 10.1063/1.4935938  0.425
2015 Timm CM, Campbell AG, Utturkar SM, Jun SR, Parales RE, Tan WA, Robeson MS, Lu TY, Jawdy S, Brown SD, Ussery DW, Schadt CW, Tuskan GA, Doktycz MJ, Weston DJ, et al. Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment. Frontiers in Microbiology. 6: 1118. PMID 26528266 DOI: 10.3389/Fmicb.2015.01118  0.336
2015 Jun SR, Wassenaar TM, Nookaew I, Hauser L, Wanchai V, Land M, Timm C, Lu TS, Schadt CW, Doktycz MJ, Pelletier DA, Ussery DW. Comparative genome analysis of Pseudomonas genomes including Populus-associated isolates. Applied and Environmental Microbiology. PMID 26519390 DOI: 10.1128/Aem.02612-15  0.419
2015 Pesko K, Voigt EA, Swick A, Morley VJ, Timm C, Yin J, Turner PE. Genome rearrangement affects RNA virus adaptability on prostate cancer cells. Frontiers in Genetics. 6: 121. PMID 25883601 DOI: 10.3389/Fgene.2015.00121  0.595
2015 Timm C, Gupta A, Yin J. Robust kinetics of an RNA virus: Transcription rates are set by genome levels. Biotechnology and Bioengineering. 112: 1655-62. PMID 25726926 DOI: 10.1002/Bit.25578  0.595
2014 Weston DJ, Timm CM, Walker AP, Gu L, Muchero W, Schmutz J, Shaw AJ, Tuskan GA, Warren JM, Wullschleger SD. Sphagnum physiology in the context of changing climate: emergent influences of genomics, modelling and host-microbiome interactions on understanding ecosystem function. Plant, Cell & Environment. PMID 25266403 DOI: 10.1111/Pce.12458  0.364
2014 Timm C, Akpinar F, Yin J. Quantitative characterization of defective virus emergence by deep sequencing. Journal of Virology. 88: 2623-32. PMID 24352442 DOI: 10.1128/Jvi.02675-13  0.671
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