| Year |
Citation |
Score |
| 2024 |
Bandyopadhyay A, Sengupta A, Elvitigala T, Pakrasi HB. Endogenous clock-mediated regulation of intracellular oxygen dynamics is essential for diazotrophic growth of unicellular cyanobacteria. Nature Communications. 15: 3712. PMID 38697963 DOI: 10.1038/s41467-024-48039-0 |
0.779 |
|
| 2023 |
Biswas S, Niedzwiedzki DM, Liberton M, Pakrasi HB. Phylogenetic and spectroscopic insights on the evolution of core antenna proteins in cyanobacteria. Photosynthesis Research. PMID 37737529 DOI: 10.1007/s11120-023-01046-6 |
0.711 |
|
| 2022 |
Zhao R, Sengupta A, Tan AX, Whelan R, Pinkerton T, Menasalvas J, Eng T, Mukhopadhyay A, Jun YS, Pakrasi HB, Tang YJ. Photobiological production of high-value pigments via compartmentalized co-cultures using Ca-alginate hydrogels. Scientific Reports. 12: 22163. PMID 36550285 DOI: 10.1038/s41598-022-26437-y |
0.435 |
|
| 2022 |
Liberton M, Biswas S, Pakrasi HB. Photosynthetic modulation during the diurnal cycle in a unicellular diazotrophic cyanobacterium grown under nitrogen-replete and nitrogen-fixing conditions. Scientific Reports. 12: 18939. PMID 36344535 DOI: 10.1038/s41598-022-21829-6 |
0.713 |
|
| 2022 |
Walker PL, Pakrasi HB. A Ubiquitously Conserved Cyanobacterial Protein Phosphatase Essential for High Light Tolerance in a Fast-Growing Cyanobacterium. Microbiology Spectrum. e0100822. PMID 35727069 DOI: 10.1128/spectrum.01008-22 |
0.306 |
|
| 2022 |
Johnson VM, Biswas S, Roose JL, Pakrasi HB, Liu H. Psb27, a photosystem II assembly protein, enables quenching of excess light energy during its participation in the PSII lifecycle. Photosynthesis Research. PMID 34985637 DOI: 10.1007/s11120-021-00895-3 |
0.783 |
|
| 2021 |
Bandyopadhyay A, Ye Z, Benedikty Z, Trtilek M, Pakrasi HB. Antenna Modification Leads to Enhanced Nitrogenase Activity in a High Light-Tolerant Cyanobacterium. Mbio. 12: e0340821. PMID 34933453 DOI: 10.1128/mbio.03408-21 |
0.347 |
|
| 2021 |
Hendry JI, Dinh HV, Sarkar D, Wang L, Bandyopadhyay A, Pakrasi HB, Maranas CD. A Genome-Scale Metabolic Model of 33047 to Guide Genetic Modifications to Overproduce Nylon Monomers. Metabolites. 11. PMID 33804103 DOI: 10.3390/metabo11030168 |
0.3 |
|
| 2021 |
Chen HS, Niedzwiedzki DM, Bandyopadhyay A, Biswas S, Pakrasi HB. A Novel Mode of Photoprotection Mediated by a Cysteine Residue in the Chlorophyll Protein IsiA. Mbio. 12. PMID 33593975 DOI: 10.1128/mBio.03663-20 |
0.335 |
|
| 2020 |
Liu D, Liberton M, Hendry JI, Aminian-Dehkordi J, Maranas CD, Pakrasi HB. Engineering biology approaches for food and nutrient production by cyanobacteria. Current Opinion in Biotechnology. 67: 1-6. PMID 33129046 DOI: 10.1016/j.copbio.2020.09.011 |
0.676 |
|
| 2020 |
Sengupta A, Pritam P, Jaiswal D, Bandyopadhyay A, Pakrasi HB, Wangikar PP. Photosynthetic Co-Production of Succinate and Ethylene in A Fast-Growing Cyanobacterium, PCC 11801. Metabolites. 10. PMID 32560048 DOI: 10.3390/Metabo10060250 |
0.337 |
|
| 2020 |
Liu D, Johnson VM, Pakrasi HB. A reversibly induced CRISPRi system targeting Photosystem II in the cyanobacterium Synechocystis sp. PCC 6803. Acs Synthetic Biology. PMID 32379958 DOI: 10.1021/Acssynbio.0C00106 |
0.354 |
|
| 2020 |
Lin PC, Zhang F, Pakrasi HB. Enhanced production of sucrose in the fast-growing cyanobacterium Synechococcus elongatus UTEX 2973. Scientific Reports. 10: 390. PMID 31942010 DOI: 10.1038/S41598-019-57319-5 |
0.331 |
|
| 2020 |
Jaiswal D, Sengupta A, Sengupta S, Madhu S, Pakrasi HB, Wangikar PP. A Novel Cyanobacterium Synechococcus elongatus PCC 11802 has Distinct Genomic and Metabolomic Characteristics Compared to its Neighbor PCC 11801. Scientific Reports. 10: 191. PMID 31932622 DOI: 10.1038/S41598-019-57051-0 |
0.375 |
|
| 2019 |
Knoot CJ, Biswas S, Pakrasi HB. Tunable repression of key photosynthetic processes using Cas12a CRISPR interference in the fast-growing cyanobacterium Synechococcus sp. UTEX 2973. Acs Synthetic Biology. PMID 31829621 DOI: 10.1021/Acssynbio.9B00417 |
0.347 |
|
| 2019 |
Weisz DA, Johnson VM, Niedzwiedzki DM, Shinn MK, Liu H, Klitzke CF, Gross ML, Blankenship RE, Lohman TM, Pakrasi HB. A novel chlorophyll protein complex in the repair cycle of photosystem II. Proceedings of the National Academy of Sciences of the United States of America. PMID 31594847 DOI: 10.1073/Pnas.1909644116 |
0.421 |
|
| 2019 |
Hendry JI, Bandyopadhyay A, Srinivasan S, Pakrasi HB, Maranas CD. Metabolic model guided strain design of cyanobacteria. Current Opinion in Biotechnology. 64: 17-23. PMID 31585306 DOI: 10.1016/J.Copbio.2019.08.011 |
0.357 |
|
| 2019 |
Nagarajan A, Zhou M, Nguyen AY, Liberton M, Kedia K, Shi T, Piehowski P, Shukla A, Fillmore TL, Nicora C, Smith RD, Koppenaal DW, Jacobs JM, Pakrasi HB. Proteomic Insights into Phycobilisome Degradation, A Selective and Tightly Controlled Process in The Fast-Growing Cyanobacterium UTEX 2973. Biomolecules. 9. PMID 31426316 DOI: 10.3390/biom9080374 |
0.728 |
|
| 2019 |
Knoot CJ, Khatri Y, Hohlman RM, Sherman DH, Pakrasi HB. Engineered production of hapalindole alkaloids in the cyanobacterium Synechococcus sp. UTEX 2973. Acs Synthetic Biology. PMID 31284716 DOI: 10.1021/Acssynbio.9B00229 |
0.338 |
|
| 2019 |
Wendt KE, Pakrasi HB. Genomics Approaches to Deciphering Natural Transformation in Cyanobacteria. Frontiers in Microbiology. 10: 1259. PMID 31231343 DOI: 10.3389/Fmicb.2019.01259 |
0.327 |
|
| 2019 |
Liu H, Weisz DA, Zhang MM, Cheng M, Zhang B, Zhang H, Gerstenecker GS, Pakrasi HB, Gross ML, Blankenship RE. Phycobilisomes Harbor FNR in Cyanobacteria. Mbio. 10. PMID 31015331 DOI: 10.1128/Mbio.00669-19 |
0.382 |
|
| 2019 |
Stingaciu LR, O'Neill HM, Liberton M, Pakrasi HB, Urban VS. Influence of Chemically Disrupted Photosynthesis on Cyanobacterial Thylakoid Dynamics in Synechocystis sp. PCC 6803. Scientific Reports. 9: 5711. PMID 30952892 DOI: 10.1038/S41598-019-42024-0 |
0.717 |
|
| 2019 |
Ungerer J, Wendt KE, Hendry JI, Maranas CD, Pakrasi HB. Reply to Zhou and Li: Plasticity of the genomic haplotype of leads to rapid strain adaptation under laboratory conditions. Proceedings of the National Academy of Sciences of the United States of America. PMID 30755539 DOI: 10.1073/Pnas.1900792116 |
0.324 |
|
| 2019 |
Knoot CJ, Pakrasi HB. Diverse hydrocarbon biosynthetic enzymes can substitute for olefin synthase in the cyanobacterium Synechococcus sp. PCC 7002. Scientific Reports. 9: 1360. PMID 30718738 DOI: 10.1038/S41598-018-38124-Y |
0.34 |
|
| 2019 |
Liberton M, Bandyopadhyay A, Pakrasi HB. Enhanced nitrogen fixation in a deficient strain of sp. ATCC 51142, a unicellular nitrogen-fixing cyanobacterium. Applied and Environmental Microbiology. PMID 30709817 DOI: 10.1128/Aem.02887-18 |
0.75 |
|
| 2019 |
Sarkar D, Mueller TJ, Liu D, Pakrasi HB, Maranas CD. A diurnal flux balance model of Synechocystis sp. PCC 6803 metabolism. Plos Computational Biology. 15: e1006692. PMID 30677028 DOI: 10.1371/Journal.Pcbi.1006692 |
0.389 |
|
| 2018 |
Hendry JI, Gopalakrishnan S, Ungerer J, Pakrasi HB, Tang Y, Maranas CD. Genome-scale fluxome of Synechococcus elongatus UTEX 2973 using transient 13C-labeling data. Plant Physiology. PMID 30552197 DOI: 10.1104/Pp.18.01357 |
0.55 |
|
| 2018 |
Jaiswal D, Sengupta A, Sohoni S, Sengupta S, Phadnavis AG, Pakrasi HB, Wangikar PP. Genome Features and Biochemical Characteristics of a Robust, Fast Growing and Naturally Transformable Cyanobacterium Synechococcus elongatus PCC 11801 Isolated from India. Scientific Reports. 8: 16632. PMID 30413737 DOI: 10.1038/S41598-018-34872-Z |
0.384 |
|
| 2018 |
Ungerer J, Wendt KE, Hendry JI, Maranas CD, Pakrasi HB. Comparative genomics reveals the molecular determinants of rapid growth of the cyanobacterium UTEX 2973. Proceedings of the National Academy of Sciences of the United States of America. PMID 30409802 DOI: 10.1073/Pnas.1814912115 |
0.346 |
|
| 2018 |
Liu D, Liberton M, Yu J, Pakrasi HB, Bhattacharyya-Pakrasi M. Engineering Nitrogen Fixation Activity in an Oxygenic Phototroph. Mbio. 9. PMID 29871920 DOI: 10.1128/Mbio.01029-18 |
0.728 |
|
| 2018 |
Sengupta A, Pakrasi HB, Wangikar PP. Recent advances in synthetic biology of cyanobacteria. Applied Microbiology and Biotechnology. PMID 29744631 DOI: 10.1007/S00253-018-9046-X |
0.322 |
|
| 2018 |
Gopalakrishnan S, Pakrasi HB, Maranas CD. Elucidation of photoautotrophic carbon flux topology in Synechocystis PCC 6803 using genome-scale carbon mapping models. Metabolic Engineering. PMID 29526818 DOI: 10.1016/J.Ymben.2018.03.008 |
0.339 |
|
| 2018 |
Singh AK, Kishore GM, Pakrasi HB. Emerging platforms for co-utilization of one-carbon substrates by photosynthetic organisms. Current Opinion in Biotechnology. 53: 201-208. PMID 29510332 DOI: 10.1016/J.Copbio.2018.02.002 |
0.523 |
|
| 2018 |
Ungerer J, Lin PC, Chen HY, Pakrasi HB. Adjustments to Photosystem Stoichiometry and Electron Transfer Proteins Are Key to the Remarkably Fast Growth of the Cyanobacterium Synechococcus elongatus UTEX 2973. Mbio. 9. PMID 29437923 DOI: 10.1128/Mbio.02327-17 |
0.373 |
|
| 2018 |
Chen HY, Bandyopadhyay A, Pakrasi HB. Function, regulation and distribution of IsiA, a membrane-bound chlorophyll a-antenna protein in cyanobacteria Photosynthetica. 56: 322-333. DOI: 10.1007/S11099-018-0787-7 |
0.369 |
|
| 2017 |
Lin PC, Saha R, Zhang F, Pakrasi HB. Metabolic engineering of the pentose phosphate pathway for enhanced limonene production in the cyanobacterium Synechocysti s sp. PCC 6803. Scientific Reports. 7: 17503. PMID 29235513 DOI: 10.1038/S41598-017-17831-Y |
0.329 |
|
| 2017 |
Abernathy MH, Yu J, Ma F, Liberton M, Ungerer J, Hollinshead WD, Gopalakrishnan S, He L, Maranas CD, Pakrasi HB, Allen DK, Tang YJ. Deciphering cyanobacterial phenotypes for fast photoautotrophic growth via isotopically nonstationary metabolic flux analysis. Biotechnology For Biofuels. 10: 273. PMID 29177008 DOI: 10.1186/S13068-017-0958-Y |
0.757 |
|
| 2017 |
Weisz DA, Gross ML, Pakrasi HB. Reactive oxygen species leave a damage trail that reveals water channels in Photosystem II. Science Advances. 3: eaao3013. PMID 29159285 DOI: 10.1126/Sciadv.Aao3013 |
0.346 |
|
| 2017 |
Murton J, Nagarajan A, Nguyen AY, Liberton M, Hancock HA, Pakrasi HB, Timlin JA. Population-level coordination of pigment response in individual cyanobacterial cells under altered nitrogen levels. Photosynthesis Research. PMID 28733863 DOI: 10.1007/S11120-017-0422-7 |
0.731 |
|
| 2017 |
Liberton M, Chrisler WB, Nicora CD, Moore RJ, Smith RD, Koppenaal DW, Pakrasi HB, Jacobs JM. Phycobilisome truncation causes widespread proteome changes in Synechocystis sp. PCC 6803. Plos One. 12: e0173251. PMID 28253354 DOI: 10.1371/Journal.Pone.0173251 |
0.756 |
|
| 2017 |
Weisz DA, Liu H, Zhang H, Thangapandian S, Tajkhorshid E, Gross ML, Pakrasi HB. Mass spectrometry-based cross-linking study shows that the Psb28 protein binds to cytochrome b559 in Photosystem II. Proceedings of the National Academy of Sciences of the United States of America. PMID 28193857 DOI: 10.1073/Pnas.1620360114 |
0.373 |
|
| 2017 |
Mueller TJ, Ungerer JL, Pakrasi HB, Maranas CD. Identifying the Metabolic Differences of a Fast-Growth Phenotype in Synechococcus UTEX 2973. Scientific Reports. 7: 41569. PMID 28139686 DOI: 10.1038/Srep41569 |
0.342 |
|
| 2017 |
Nguyen AY, Bricker WP, Zhang H, Weisz DA, Gross ML, Pakrasi HB. The proteolysis adaptor, NblA, binds to the N-terminus of β-phycocyanin: Implications for the mechanism of phycobilisome degradation. Photosynthesis Research. PMID 28078551 DOI: 10.1007/S11120-016-0334-Y |
0.309 |
|
| 2017 |
Chen HS, Liberton M, Pakrasi HB, Niedzwiedzki DM. Reevaluating the Mechanism of Excitation Energy Regulation in Iron-Starved Cyanobacteria. Biochimica Et Biophysica Acta. PMID 28077273 DOI: 10.1016/J.Bbabio.2017.01.001 |
0.72 |
|
| 2016 |
Ungerer J, Pakrasi HB. Cpf1 Is A Versatile Tool for CRISPR Genome Editing Across Diverse Species of Cyanobacteria. Scientific Reports. 6: 39681. PMID 28000776 DOI: 10.1038/Srep39681 |
0.332 |
|
| 2016 |
Zhu Y, Liberton M, Pakrasi HB. A Novel Redoxin in the Thylakoid Membrane Regulates the Titer of Photosystem I. The Journal of Biological Chemistry. PMID 27382055 DOI: 10.1074/Jbc.M116.721175 |
0.758 |
|
| 2016 |
Wendt KE, Ungerer J, Cobb RE, Zhao H, Pakrasi HB. CRISPR/Cas9 mediated targeted mutagenesis of the fast growing cyanobacterium Synechococcus elongatus UTEX 2973. Microbial Cell Factories. 15: 115. PMID 27339038 DOI: 10.1186/S12934-016-0514-7 |
0.331 |
|
| 2016 |
Weisz DA, Gross ML, Pakrasi HB. The Use of Advanced Mass Spectrometry to Dissect the Life-Cycle of Photosystem II. Frontiers in Plant Science. 7: 617. PMID 27242823 DOI: 10.3389/Fpls.2016.00617 |
0.354 |
|
| 2016 |
Saha R, Liu D, Hoynes-O'Connor A, Liberton M, Yu J, Bhattacharyya-Pakrasi M, Balassy A, Zhang F, Moon TS, Maranas CD, Pakrasi HB. Diurnal Regulation of Cellular Processes in the Cyanobacterium Synechocystis sp. Strain PCC 6803: Insights from Transcriptomic, Fluxomic, and Physiological Analyses. Mbio. 7. PMID 27143387 DOI: 10.1128/Mbio.00464-16 |
0.747 |
|
| 2016 |
Liberton M, Saha R, Jacobs JM, Nguyen AY, Gritsenko MA, Smith RD, Koppenaal DW, Pakrasi HB. Global Proteomic Analysis Reveals an Exclusive Role of Thylakoid Membranes in Bioenergetics of a Model Cyanobacterium. Molecular & Cellular Proteomics : McP. PMID 27056914 DOI: 10.1074/Mcp.M115.057240 |
0.701 |
|
| 2016 |
Stingaciu LR, O'Neill H, Liberton M, Urban VS, Pakrasi HB, Ohl M. Revealing the Dynamics of Thylakoid Membranes in Living Cyanobacterial Cells. Scientific Reports. 6: 19627. PMID 26790980 DOI: 10.1038/Srep19627 |
0.71 |
|
| 2015 |
Mueller TJ, Welsh EA, Pakrasi HB, Maranas CD. Identifying regulatory changes to facilitate nitrogen fixation in the non-diazotroph Synechocystis sp. PCC 6803. Acs Synthetic Biology. PMID 26692191 DOI: 10.1021/Acssynbio.5B00202 |
0.369 |
|
| 2015 |
Berla BM, Saha R, Maranas CD, Pakrasi HB. Cyanobacterial Alkanes Modulate Photosynthetic Cyclic Electron Flow to Assist Growth under Cold Stress. Scientific Reports. 5: 14894. PMID 26459862 DOI: 10.1038/Srep14894 |
0.376 |
|
| 2015 |
Ng AH, Berla BM, Pakrasi HB. Fine-Tuning of Photoautotrophic Protein Production by Combining Promoters and Neutral Sites in the Cyanobacterium Synechocystis sp. Strain PCC 6803. Applied and Environmental Microbiology. 81: 6857-63. PMID 26209663 DOI: 10.1128/Aem.01349-15 |
0.342 |
|
| 2015 |
Liu H, Weisz DA, Pakrasi HB. Multiple copies of the PsbQ protein in a cyanobacterial photosystem II assembly intermediate complex. Photosynthesis Research. 126: 375-83. PMID 25800517 DOI: 10.1007/S11120-015-0123-Z |
0.373 |
|
| 2015 |
Yu J, Liberton M, Cliften PF, Head RD, Jacobs JM, Smith RD, Koppenaal DW, Brand JJ, Pakrasi HB. Synechococcus elongatus UTEX 2973, a fast growing cyanobacterial chassis for biosynthesis using light and CO₂. Scientific Reports. 5: 8132. PMID 25633131 DOI: 10.1038/Srep08132 |
0.718 |
|
| 2015 |
Wegener KM, Nagarajan A, Pakrasi HB. An atypical psbA gene encodes a sentinel D1 protein to form a physiologically relevant inactive photosystem II complex in cyanobacteria. The Journal of Biological Chemistry. 290: 3764-74. PMID 25525275 DOI: 10.1074/Jbc.M114.604124 |
0.81 |
|
| 2014 |
Nagarajan A, Page LE, Liberton M, Pakrasi HB. Consequences of Decreased Light Harvesting Capability on Photosystem II Function in Synechocystis sp. PCC 6803. Life (Basel, Switzerland). 4: 903-14. PMID 25513759 DOI: 10.3390/Life4040903 |
0.8 |
|
| 2014 |
Guo J, Nguyen AY, Dai Z, Su D, Gaffrey MJ, Moore RJ, Jacobs JM, Monroe ME, Smith RD, Koppenaal DW, Pakrasi HB, Qian WJ. Proteome-wide light/dark modulation of thiol oxidation in cyanobacteria revealed by quantitative site-specific redox proteomics. Molecular & Cellular Proteomics : McP. 13: 3270-85. PMID 25118246 DOI: 10.1074/Mcp.M114.041160 |
0.376 |
|
| 2014 |
Aryal UK, Callister SJ, McMahon BH, McCue LA, Brown J, Stöckel J, Liberton M, Mishra S, Zhang X, Nicora CD, Angel TE, Koppenaal DW, Smith RD, Pakrasi HB, Sherman LA. Proteomic profiles of five strains of oxygenic photosynthetic cyanobacteria of the genus Cyanothece. Journal of Proteome Research. 13: 3262-76. PMID 24846609 DOI: 10.1021/Pr5000889 |
0.8 |
|
| 2014 |
You L, Berla B, He L, Pakrasi HB, Tang YJ. 13C-MFA delineates the photomixotrophic metabolism of Synechocystis sp. PCC 6803 under light- and carbon-sufficient conditions. Biotechnology Journal. 9: 684-92. PMID 24659531 DOI: 10.1002/Biot.201300477 |
0.569 |
|
| 2014 |
Liu H, Zhang H, Weisz DA, Vidavsky I, Gross ML, Pakrasi HB. MS-based cross-linking analysis reveals the location of the PsbQ protein in cyanobacterial photosystem II. Proceedings of the National Academy of Sciences of the United States of America. 111: 4638-43. PMID 24550459 DOI: 10.1073/Pnas.1323063111 |
0.369 |
|
| 2014 |
Arey BW, Dohnalkova AC, Koppenaal DW, Liberton M, Pakrasi HB. High resolution electron and ion microscopy of photosynthetic complexes Microscopy and Microanalysis. 20: 1186-1187. DOI: 10.1017/S1431927614007661 |
0.668 |
|
| 2013 |
Mueller TJ, Berla BM, Pakrasi HB, Maranas CD. Rapid construction of metabolic models for a family of Cyanobacteria using a multiple source annotation workflow. Bmc Systems Biology. 7: 142. PMID 24369854 DOI: 10.1186/1752-0509-7-142 |
0.362 |
|
| 2013 |
Liberton M, Collins AM, Page LE, O'Dell WB, O'Neill H, Urban VS, Timlin JA, Pakrasi HB. Probing the consequences of antenna modification in cyanobacteria. Photosynthesis Research. 118: 17-24. PMID 24132812 DOI: 10.1007/S11120-013-9940-0 |
0.795 |
|
| 2013 |
Berla BM, Saha R, Immethun CM, Maranas CD, Moon TS, Pakrasi HB. Synthetic biology of cyanobacteria: unique challenges and opportunities. Frontiers in Microbiology. 4: 246. PMID 24009604 DOI: 10.3389/Fmicb.2013.00246 |
0.342 |
|
| 2013 |
Liu H, Chen J, Huang RY, Weisz D, Gross ML, Pakrasi HB. Mass spectrometry-based footprinting reveals structural dynamics of loop E of the chlorophyll-binding protein CP43 during photosystem II assembly in the cyanobacterium Synechocystis 6803. The Journal of Biological Chemistry. 288: 14212-20. PMID 23546881 DOI: 10.1074/Jbc.M113.467613 |
0.333 |
|
| 2013 |
Stöckel J, Elvitigala TR, Liberton M, Pakrasi HB. Carbon availability affects diurnally controlled processes and cell morphology of Cyanothece 51142. Plos One. 8: e56887. PMID 23457634 DOI: 10.1371/Journal.Pone.0056887 |
0.789 |
|
| 2013 |
Krishnakumar S, Gaudana SB, Viswanathan GA, Pakrasi HB, Wangikar PP. Rhythm of carbon and nitrogen fixation in unicellular cyanobacteria under turbulent and highly aerobic conditions. Biotechnology and Bioengineering. 110: 2371-9. PMID 23456695 DOI: 10.1002/Bit.24882 |
0.401 |
|
| 2013 |
Landry BP, Stöckel J, Pakrasi HB. Use of degradation tags to control protein levels in the Cyanobacterium Synechocystis sp. Strain PCC 6803. Applied and Environmental Microbiology. 79: 2833-5. PMID 23396339 DOI: 10.1128/Aem.03741-12 |
0.353 |
|
| 2013 |
Bandyopadhyay A, Elvitigala T, Liberton M, Pakrasi HB. Variations in the rhythms of respiration and nitrogen fixation in members of the unicellular diazotrophic cyanobacterial genus Cyanothece. Plant Physiology. 161: 1334-46. PMID 23274238 DOI: 10.1104/Pp.112.208231 |
0.812 |
|
| 2013 |
Liberton M, Page LE, O'Dell WB, O'Neill H, Mamontov E, Urban VS, Pakrasi HB. Organization and flexibility of cyanobacterial thylakoid membranes examined by neutron scattering. The Journal of Biological Chemistry. 288: 3632-40. PMID 23255600 DOI: 10.1074/Jbc.M112.416933 |
0.803 |
|
| 2013 |
Varman AM, Xiao Y, Pakrasi HB, Tang YJ. Metabolic engineering of Synechocystis sp. strain PCC 6803 for isobutanol production. Applied and Environmental Microbiology. 79: 908-14. PMID 23183979 DOI: 10.1128/Aem.02827-12 |
0.78 |
|
| 2013 |
Musgrave WB, Yi H, Kline D, Cameron JC, Wignes J, Dey S, Pakrasi HB, Jez JM. Probing the origins of glutathione biosynthesis through biochemical analysis of glutamate-cysteine ligase and glutathione synthetase from a model photosynthetic prokaryote. The Biochemical Journal. 450: 63-72. PMID 23170977 DOI: 10.1042/Bj20121332 |
0.638 |
|
| 2013 |
Memon D, Singh AK, Pakrasi HB, Wangikar PP. A global analysis of adaptive evolution of operons in cyanobacteria. Antonie Van Leeuwenhoek. 103: 331-46. PMID 22987250 DOI: 10.1007/S10482-012-9813-0 |
0.565 |
|
| 2012 |
Saha R, Verseput AT, Berla BM, Mueller TJ, Pakrasi HB, Maranas CD. Reconstruction and comparison of the metabolic potential of cyanobacteria Cyanothece sp. ATCC 51142 and Synechocystis sp. PCC 6803. Plos One. 7: e48285. PMID 23133581 DOI: 10.1371/Journal.Pone.0048285 |
0.384 |
|
| 2012 |
Page LE, Liberton M, Pakrasi HB. Reduction of photoautotrophic productivity in the cyanobacterium Synechocystis sp. strain PCC 6803 by phycobilisome antenna truncation. Applied and Environmental Microbiology. 78: 6349-51. PMID 22706065 DOI: 10.1128/Aem.00499-12 |
0.783 |
|
| 2012 |
Berla BM, Pakrasi HB. Upregulation of plasmid genes during stationary phase in Synechocystis sp. strain PCC 6803, a cyanobacterium. Applied and Environmental Microbiology. 78: 5448-51. PMID 22636001 DOI: 10.1128/Aem.01174-12 |
0.311 |
|
| 2012 |
Collins AM, Liberton M, Jones HD, Garcia OF, Pakrasi HB, Timlin JA. Photosynthetic pigment localization and thylakoid membrane morphology are altered in Synechocystis 6803 phycobilisome mutants. Plant Physiology. 158: 1600-9. PMID 22331410 DOI: 10.1104/Pp.111.192849 |
0.752 |
|
| 2012 |
You L, Page L, Feng X, Berla B, Pakrasi HB, Tang YJ. Metabolic pathway confirmation and discovery through (13)C-labeling of proteinogenic amino acids. Journal of Visualized Experiments : Jove. e3583. PMID 22314852 DOI: 10.3791/3583 |
0.776 |
|
| 2012 |
Aryal UK, Stöckel J, Welsh EA, Gritsenko MA, Nicora CD, Koppenaal DW, Smith RD, Pakrasi HB, Jacobs JM. Dynamic proteome analysis of Cyanothece sp. ATCC 51142 under constant light. Journal of Proteome Research. 11: 609-19. PMID 22060561 DOI: 10.1021/Pr200959X |
0.431 |
|
| 2012 |
Milne JL, Cameron JC, Page LE, Benson SM, Pakrasi HB. Algal technologies for biological capture and utilization of CO2 require breakthroughs in basic research Acs Symposium Series. 1116: 107-141. DOI: 10.1021/bk-2012-1116.ch007 |
0.776 |
|
| 2011 |
Aryal UK, Stöckel J, Krovvidi RK, Gritsenko MA, Monroe ME, Moore RJ, Koppenaal DW, Smith RD, Pakrasi HB, Jacobs JM. Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles. Bmc Systems Biology. 5: 194. PMID 22133144 DOI: 10.1186/1752-0509-5-194 |
0.363 |
|
| 2011 |
Liu H, Huang RY, Chen J, Gross ML, Pakrasi HB. Psb27, a transiently associated protein, binds to the chlorophyll binding protein CP43 in photosystem II assembly intermediates. Proceedings of the National Academy of Sciences of the United States of America. 108: 18536-41. PMID 22031695 DOI: 10.1073/Pnas.1111597108 |
0.378 |
|
| 2011 |
Bandyopadhyay A, Elvitigala T, Welsh E, Stöckel J, Liberton M, Min H, Sherman LA, Pakrasi HB. Novel metabolic attributes of the genus cyanothece, comprising a group of unicellular nitrogen-fixing Cyanothece. Mbio. 2. PMID 21972240 DOI: 10.1128/Mbio.00214-11 |
0.808 |
|
| 2011 |
McDermott JE, Oehmen CS, McCue LA, Hill E, Choi DM, Stöckel J, Liberton M, Pakrasi HB, Sherman LA. A model of cyclic transcriptomic behavior in the cyanobacterium Cyanothece sp. ATCC 51142. Molecular Biosystems. 7: 2407-18. PMID 21698331 DOI: 10.1039/C1Mb05006K |
0.79 |
|
| 2011 |
Wegener KM, Bennewitz S, Oelmüller R, Pakrasi HB. The Psb32 protein aids in repairing photodamaged photosystem II in the cyanobacterium Synechocystis 6803. Molecular Plant. 4: 1052-61. PMID 21653280 DOI: 10.1093/Mp/Ssr044 |
0.809 |
|
| 2011 |
Liu H, Roose JL, Cameron JC, Pakrasi HB. A genetically tagged Psb27 protein allows purification of two consecutive photosystem II (PSII) assembly intermediates in Synechocystis 6803, a cyanobacterium. The Journal of Biological Chemistry. 286: 24865-71. PMID 21592967 DOI: 10.1074/Jbc.M111.246231 |
0.812 |
|
| 2011 |
Cameron JC, Pakrasi HB. Glutathione facilitates antibiotic resistance and photosystem I stability during exposure to gentamicin in cyanobacteria. Applied and Environmental Microbiology. 77: 3547-50. PMID 21460113 DOI: 10.1128/Aem.02542-10 |
0.57 |
|
| 2011 |
Liberton M, Austin JR, Berg RH, Pakrasi HB. Insights into the complex 3-D architecture of thylakoid membranes in unicellular cyanobacterium Cyanothece sp. ATCC 51142. Plant Signaling & Behavior. 6: 566-9. PMID 21445014 DOI: 10.4161/Psb.6.4.14946 |
0.714 |
|
| 2011 |
Stöckel J, Jacobs JM, Elvitigala TR, Liberton M, Welsh EA, Polpitiya AD, Gritsenko MA, Nicora CD, Koppenaal DW, Smith RD, Pakrasi HB. Diurnal rhythms result in significant changes in the cellular protein complement in the cyanobacterium Cyanothece 51142. Plos One. 6: e16680. PMID 21364985 DOI: 10.1371/Journal.Pone.0016680 |
0.817 |
|
| 2011 |
Cameron JC, Pakrasi HB. Glutathione in Synechocystis 6803: a closer look into the physiology of a ∆gshB mutant. Plant Signaling & Behavior. 6: 89-92. PMID 21301218 DOI: 10.4161/Psb.6.1.14145 |
0.632 |
|
| 2011 |
Liberton M, Austin JR, Berg RH, Pakrasi HB. Unique thylakoid membrane architecture of a unicellular N2-fixing cyanobacterium revealed by electron tomography. Plant Physiology. 155: 1656-66. PMID 21173021 DOI: 10.1104/Pp.110.165332 |
0.719 |
|
| 2011 |
Inoue-Kashino N, Kashino Y, Orii H, Satoh K, Terashima I, Pakrasi HB. S4 protein Sll1252 is necessary for energy balancing in photosynthetic electron transport in Synechocystis sp. PCC 6803. Biochemistry. 50: 329-39. PMID 21141807 DOI: 10.1021/Bi101077E |
0.394 |
|
| 2011 |
Wang W, Ghosh BK, Pakrasi HB. Identification and modeling of genes with diurnal oscillations from microarray time series data. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 8: 108-21. PMID 21071801 DOI: 10.1109/Tcbb.2009.37 |
0.338 |
|
| 2011 |
Cameron JC, Pakrasi HB. Glutathione in synechocystis 6803: A closer look into the physiology of a ΔgshB mutant Plant Signaling and Behavior. 6. DOI: 10.4161.psb.6.1.14145 |
0.596 |
|
| 2011 |
Timlin J, Collins A, Liberton M, Jones H, Pakrasi H. Structure and Function of Photosynthetic Complexes in Cyanobacteria Revealed by Hyperspectral Confocal Fluorescence and Electron Microscopy Microscopy and Microanalysis. 17: 226-227. DOI: 10.1017/S1431927611002005 |
0.682 |
|
| 2010 |
Feng X, Page L, Rubens J, Chircus L, Colletti P, Pakrasi HB, Tang YJ. Bridging the gap between fluxomics and industrial biotechnology. Journal of Biomedicine & Biotechnology. 2010: 460717. PMID 21274256 DOI: 10.1155/2010/460717 |
0.78 |
|
| 2010 |
Bandyopadhyay A, Stöckel J, Min H, Sherman LA, Pakrasi HB. High rates of photobiological H2 production by a cyanobacterium under aerobic conditions. Nature Communications. 1: 139. PMID 21266989 DOI: 10.1038/Ncomms1139 |
0.701 |
|
| 2010 |
Cameron JC, Pakrasi HB. Essential role of glutathione in acclimation to environmental and redox perturbations in the cyanobacterium Synechocystis sp. PCC 6803. Plant Physiology. 154: 1672-85. PMID 20935175 DOI: 10.1104/Pp.110.162990 |
0.661 |
|
| 2010 |
Wegener KM, Singh AK, Jacobs JM, Elvitigala T, Welsh EA, Keren N, Gritsenko MA, Ghosh BK, Camp DG, Smith RD, Pakrasi HB. Global proteomics reveal an atypical strategy for carbon/nitrogen assimilation by a cyanobacterium under diverse environmental perturbations. Molecular & Cellular Proteomics : McP. 9: 2678-89. PMID 20858728 DOI: 10.1074/Mcp.M110.000109 |
0.793 |
|
| 2010 |
Singh AK, Elvitigala T, Cameron JC, Ghosh BK, Bhattacharyya-Pakrasi M, Pakrasi HB. Integrative analysis of large scale expression profiles reveals core transcriptional response and coordination between multiple cellular processes in a cyanobacterium. Bmc Systems Biology. 4: 105. PMID 20678200 DOI: 10.1186/1752-0509-4-105 |
0.799 |
|
| 2010 |
Sherman LA, Min H, Toepel J, Pakrasi HB. Better living through cyanothece - unicellular diazotrophic cyanobacteria with highly versatile metabolic systems. Advances in Experimental Medicine and Biology. 675: 275-90. PMID 20532747 DOI: 10.1007/978-1-4419-1528-3_16 |
0.808 |
|
| 2010 |
Feng X, Bandyopadhyay A, Berla B, Page L, Wu B, Pakrasi HB, Tang YJ. Mixotrophic and photoheterotrophic metabolism in Cyanothece sp. ATCC 51142 under continuous light. Microbiology (Reading, England). 156: 2566-74. PMID 20430816 DOI: 10.1099/Mic.0.038232-0 |
0.801 |
|
| 2010 |
Wu B, Zhang B, Feng X, Rubens JR, Huang R, Hicks LM, Pakrasi HB, Tang YJ. Alternative isoleucine synthesis pathway in cyanobacterial species. Microbiology (Reading, England). 156: 596-602. PMID 19875435 DOI: 10.1099/Mic.0.031799-0 |
0.556 |
|
| 2010 |
Elvitigala TR, Polpitiya AD, Wang W, Stöckel J, Khandelwal A, Quatrano RS, Pakrasi HB, Ghosh BK. High-throughput biological data analysis: A step toward understanding cellular regulation Ieee Control Systems Magazine. 30: 81-100. DOI: 10.1109/Mcs.2010.938100 |
0.761 |
|
| 2010 |
Timlin J, Jones H, Liberton M, Davis R, Noek R, Ricken J, Sinclair M, Hadi M, Pakrasi H, Haaland D. Hyperspectral Imaging of Endogenous Pigments in the Bioenergy Sciences Microscopy and Microanalysis. 16: 948-949. DOI: 10.1017/S1431927610061192 |
0.652 |
|
| 2009 |
Singh AK, Bhattacharyya-Pakrasi M, Elvitigala T, Ghosh B, Aurora R, Pakrasi HB. A systems-level analysis of the effects of light quality on the metabolism of a cyanobacterium. Plant Physiology. 151: 1596-608. PMID 19759342 DOI: 10.1104/Pp.109.144824 |
0.807 |
|
| 2009 |
Elvitigala T, Stöckel J, Ghosh BK, Pakrasi HB. Effect of continuous light on diurnal rhythms in Cyanothece sp. ATCC 51142. Bmc Genomics. 10: 226. PMID 19445672 DOI: 10.1186/1471-2164-10-226 |
0.782 |
|
| 2009 |
Elvitigala TR, Singh AK, Pakrasi HB, Ghosh BK. Bayesian network approach to understand regulation of biological processes in cyanobacteria Proceedings of the Ieee Conference On Decision and Control. 3739-3744. DOI: 10.1109/CDC.2009.5399570 |
0.773 |
|
| 2009 |
Elvitigala TR, Pakrasi HB, Ghosh BK. Modeling and simulation of diurnal biological processes in cyanobacteria Proceedings of the American Control Conference. 343-348. DOI: 10.1109/ACC.2009.5159968 |
0.764 |
|
| 2009 |
Liberton M, Austin JR, Berg RH, Pakrasi HB. Three-dimensional arrangement of thylakoid membranes in cyanothece sp. ATCC 51142, a unicellular cyanobacterium Microscopy and Microanalysis. 15: 876-877. DOI: 10.1017/S1431927609098158 |
0.689 |
|
| 2009 |
Elvitigala T, Pakrasi HB, Ghosh BK. Dynamic network modeling of diurnal genes in cyanobacteria Lecture Notes in Control and Information Sciences. 393: 21-41. DOI: 10.1007/978-3-642-03627-9_2 |
0.779 |
|
| 2008 |
Welsh EA, Liberton M, Stöckel J, Loh T, Elvitigala T, Wang C, Wollam A, Fulton RS, Clifton SW, Jacobs JM, Aurora R, Ghosh BK, Sherman LA, Smith RD, Wilson RK, ... Pakrasi HB, et al. The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle. Proceedings of the National Academy of Sciences of the United States of America. 105: 15094-9. PMID 18812508 DOI: 10.1073/Pnas.0805418105 |
0.793 |
|
| 2008 |
Xu M, Bernát G, Singh A, Mi H, Rögner M, Pakrasi HB, Ogawa T. Properties of mutants of Synechocystis sp. strain PCC 6803 lacking inorganic carbon sequestration systems. Plant & Cell Physiology. 49: 1672-7. PMID 18784196 DOI: 10.1093/Pcp/Pcn139 |
0.563 |
|
| 2008 |
Wegener KM, Welsh EA, Thornton LE, Keren N, Jacobs JM, Hixson KK, Monroe ME, Camp DG, Smith RD, Pakrasi HB. High sensitivity proteomics assisted discovery of a novel operon involved in the assembly of photosystem II, a membrane protein complex. The Journal of Biological Chemistry. 283: 27829-37. PMID 18693241 DOI: 10.1074/Jbc.M803918200 |
0.815 |
|
| 2008 |
Singh AK, Elvitigala T, Bhattacharyya-Pakrasi M, Aurora R, Ghosh B, Pakrasi HB. Integration of carbon and nitrogen metabolism with energy production is crucial to light acclimation in the cyanobacterium Synechocystis. Plant Physiology. 148: 467-78. PMID 18599646 DOI: 10.1104/Pp.108.123489 |
0.821 |
|
| 2008 |
Xu M, Ogawa T, Pakrasi HB, Mi H. Identification and localization of the CupB protein involved in constitutive CO2 uptake in the cyanobacterium, Synechocystis sp. strain PCC 6803. Plant & Cell Physiology. 49: 994-7. PMID 18467341 DOI: 10.1093/Pcp/Pcn074 |
0.377 |
|
| 2008 |
Stöckel J, Welsh EA, Liberton M, Kunnvakkam R, Aurora R, Pakrasi HB. Global transcriptomic analysis of Cyanothece 51142 reveals robust diurnal oscillation of central metabolic processes. Proceedings of the National Academy of Sciences of the United States of America. 105: 6156-61. PMID 18427117 DOI: 10.1073/Pnas.0711068105 |
0.739 |
|
| 2008 |
Singh AK, Bhattacharyya-Pakrasi M, Pakrasi HB. Identification of an atypical membrane protein involved in the formation of protein disulfide bonds in oxygenic photosynthetic organisms. The Journal of Biological Chemistry. 283: 15762-70. PMID 18413314 DOI: 10.1074/Jbc.M800982200 |
0.587 |
|
| 2008 |
Toepel J, Welsh E, Summerfield TC, Pakrasi HB, Sherman LA. Differential transcriptional analysis of the cyanobacterium Cyanothece sp. strain ATCC 51142 during light-dark and continuous-light growth. Journal of Bacteriology. 190: 3904-13. PMID 18390663 DOI: 10.1128/Jb.00206-08 |
0.812 |
|
| 2008 |
Roose JL, Pakrasi HB. The Psb27 protein facilitates manganese cluster assembly in photosystem II. The Journal of Biological Chemistry. 283: 4044-50. PMID 18089572 DOI: 10.1074/Jbc.M708960200 |
0.777 |
|
| 2008 |
Ghosh BK, Pakrasi HB, Elvitigala TR. Controlling diurnal rhythms by light 2008 10th International Conference On Control, Automation, Robotics and Vision, Icarcv 2008. 1367-1372. DOI: 10.1109/ICARCV.2008.4795722 |
0.775 |
|
| 2008 |
Welsh EA, Liberton M, Stöckel J, Pakrasi HB. Reply to Zhang et al.: Identification of origins of replication in the Cyanothece 51142 genome Proceedings of the National Academy of Sciences of the United States of America. 105: E126-E127. DOI: 10.1073/Pnas.0810681106 |
0.664 |
|
| 2007 |
Aurora R, Hihara Y, Singh AK, Pakrasi HB. A network of genes regulated by light in cyanobacteria. Omics : a Journal of Integrative Biology. 11: 166-85. PMID 17594236 DOI: 10.1089/Omi.2007.4323 |
0.557 |
|
| 2007 |
Roose JL, Kashino Y, Pakrasi HB. The PsbQ protein defines cyanobacterial Photosystem II complexes with highest activity and stability. Proceedings of the National Academy of Sciences of the United States of America. 104: 2548-53. PMID 17287351 DOI: 10.1073/Pnas.0609337104 |
0.793 |
|
| 2007 |
Roose JL, Wegener KM, Pakrasi HB. The extrinsic proteins of Photosystem II. Photosynthesis Research. 92: 369-87. PMID 17200881 DOI: 10.1007/S11120-006-9117-1 |
0.798 |
|
| 2007 |
Kashino Y, Harayama T, Pakrasi HB, Satoh K. Preparation of membrane proteins for analysis by two-dimensional gel electrophoresis. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 849: 282-92. PMID 17113836 DOI: 10.1016/J.Jchromb.2006.10.067 |
0.312 |
|
| 2006 |
Buchko GW, Robinson H, Ni S, Pakrasi HB, Kennedy MA. Cloning, expression, crystallization and preliminary crystallographic analysis of a pentapeptide-repeat protein (Rfr23) from the bacterium Cyanothece 51142. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 62: 1251-4. PMID 17142909 DOI: 10.1107/S174430910604663X |
0.31 |
|
| 2006 |
Buchko GW, Ni S, Robinson H, Welsh EA, Pakrasi HB, Kennedy MA. Characterization of two potentially universal turn motifs that shape the repeated five-residues fold--crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142. Protein Science : a Publication of the Protein Society. 15: 2579-95. PMID 17075135 DOI: 10.1110/Ps.062407506 |
0.302 |
|
| 2006 |
Koropatkin NM, Pakrasi HB, Smith TJ. Atomic structure of a nitrate-binding protein crucial for photosynthetic productivity. Proceedings of the National Academy of Sciences of the United States of America. 103: 9820-5. PMID 16777960 DOI: 10.1073/Pnas.0602517103 |
0.372 |
|
| 2006 |
Liberton M, Howard Berg R, Heuser J, Roth R, Pakrasi HB. Ultrastructure of the membrane systems in the unicellular cyanobacterium Synechocystis sp. strain PCC 6803. Protoplasma. 227: 129-38. PMID 16736255 DOI: 10.1007/S00709-006-0145-7 |
0.707 |
|
| 2006 |
Kashino Y, Inoue-Kashino N, Roose JL, Pakrasi HB. Absence of the PsbQ protein results in destabilization of the PsbV protein and decreased oxygen evolution activity in cyanobacterial photosystem II. The Journal of Biological Chemistry. 281: 20834-41. PMID 16723351 DOI: 10.1074/Jbc.M603188200 |
0.779 |
|
| 2005 |
Keren N, Ohkawa H, Welsh EA, Liberton M, Pakrasi HB. Psb29, a conserved 22-kD protein, functions in the biogenesis of Photosystem II complexes in Synechocystis and Arabidopsis. The Plant Cell. 17: 2768-81. PMID 16155179 DOI: 10.1105/Tpc.105.035048 |
0.758 |
|
| 2005 |
Thornton LE, Keren N, Ohad I, Pakrasi HB. Physcomitrella patens and Ceratodon purpureus, mosses as model organisms in photosynthesis studies Photosynthesis Research. 83: 87-96. PMID 16143910 DOI: 10.1007/S11120-004-5577-3 |
0.694 |
|
| 2005 |
Inoue-Kashino N, Kashino Y, Satoh K, Terashima I, Pakrasi HB. PsbU provides a stable architecture for the oxygen-evolving system in cyanobacterial photosystem II. Biochemistry. 44: 12214-28. PMID 16142920 DOI: 10.1021/Bi047539K |
0.406 |
|
| 2005 |
Zhang P, Battchikova N, Paakkarinen V, Katoh H, Iwai M, Ikeuchi M, Pakrasi HB, Ogawa T, Aro EM. Isolation, subunit composition and interaction of the NDH-1 complexes from Thermosynechococcus elongatus BP-1. The Biochemical Journal. 390: 513-20. PMID 15910282 DOI: 10.1042/Bj20050390 |
0.322 |
|
| 2005 |
Keren N, Liberton M, Pakrasi HB. Photochemical competence of assembled photosystem II core complex in cyanobacterial plasma membrane Journal of Biological Chemistry. 280: 6548-6553. PMID 15611096 DOI: 10.1074/Jbc.M410218200 |
0.726 |
|
| 2004 |
Roose JL, Pakrasi HB. Evidence that D1 processing is required for manganese binding and extrinsic protein assembly into photosystem II. The Journal of Biological Chemistry. 279: 45417-22. PMID 15308630 DOI: 10.1074/Jbc.M408458200 |
0.79 |
|
| 2004 |
Thomton LE, Ohkawa H, Roose JL, Kashino Y, Keren N, Pakrasi HB. Homologs of plant PsbP and PsbQ proteins are necessary for regulation of photosystem II activity in the cyanobacterium Synechocystis 6803 W inside box sign Plant Cell. 16: 2164-2175. PMID 15258264 DOI: 10.1105/Tpc.104.023515 |
0.784 |
|
| 2004 |
Kobayashi M, Ishizuka T, Katayama M, Kanehisa M, Bhattacharyya-Pakrasi M, Pakrasi HB, Ikeuchi M. Response to oxidative stress involves a novel peroxiredoxin gene in the unicellular cyanobacterium Synechocystis sp. PCC 6803 Plant and Cell Physiology. 45: 290-299. PMID 15047877 DOI: 10.1093/Pcp/Pch034 |
0.39 |
|
| 2003 |
Chandler LE, Bartsevich VV, Pakrasi HB. Regulation of manganese uptake in Synechocystis 6803 by RfrA, a member of a novel family of proteins containing a repeated five-residues domain. Biochemistry. 42: 5508-14. PMID 12731893 DOI: 10.1021/Bi027113A |
0.355 |
|
| 2003 |
Swiatek M, Regel RE, Meurer J, Wanner G, Pakrasi HB, Ohad I, Herrmann RG. Effects of selective inactivation of individual genes for low-molecular-mass subunits on the assembly of photosystem II, as revealed by chloroplast transformation: The psbEFLJ operon in Nicotiana tabacum Molecular Genetics and Genomics. 268: 699-710. PMID 12655396 DOI: 10.1007/S00438-002-0791-1 |
0.395 |
|
| 2002 |
Ohkawa H, Sonoda M, Hagino N, Shibata M, Pakrasi HB, Ogawa T. Functionally distinct NAD(P)H dehydrogenases and their membrane localization in Synechocystis sp. PCC6803. Functional Plant Biology : Fpb. 29: 195-200. PMID 32689466 DOI: 10.1071/Pp01180 |
0.399 |
|
| 2002 |
Huang F, Parmryd I, Nilsson F, Persson AL, Pakrasi HB, Andersson B, Norling B. Proteomics of Synechocystis sp. strain PCC 6803: identification of plasma membrane proteins. Molecular & Cellular Proteomics : McP. 1: 956-66. PMID 12543932 DOI: 10.1074/Mcp.M200043-Mcp200 |
0.34 |
|
| 2002 |
Keren N, Kidd MJ, Penner-Hahn JE, Pakrasi HB. A light-dependent mechanism for massive accumulation of manganese in the photosynthetic bacterium Synechocystis sp. PCC 6803. Biochemistry. 41: 15085-92. PMID 12475258 DOI: 10.1021/Bi026892S |
0.374 |
|
| 2002 |
Kashino Y, Koike H, Yoshio M, Egashira H, Ikeuchi M, Pakrasi HB, Satoh K. Low-molecular-mass polypeptide components of a photosystem II preparation from the thermophilic cyanobacterium Thermosynechococcus vulcanus. Plant & Cell Physiology. 43: 1366-73. PMID 12461137 DOI: 10.1093/Pcp/Pcf168 |
0.314 |
|
| 2002 |
Kashino Y, Lauber WM, Carroll JA, Wang Q, Whitmarsh J, Satoh K, Pakrasi HB. Proteomic analysis of a highly active photosystem II preparation from the cyanobacterium Synechocystis sp. PCC 6803 reveals the presence of novel polypeptides. Biochemistry. 41: 8004-12. PMID 12069591 DOI: 10.1021/Bi026012+ |
0.389 |
|
| 2002 |
Ogawa T, Bao DH, Katoh H, Shibata M, Pakrasi HB, Bhattacharyya-Pakrasi M. A two-component signal transduction pathway regulates manganese homeostasis in Synechocystis 6803, a photosynthetic organism. The Journal of Biological Chemistry. 277: 28981-6. PMID 12039966 DOI: 10.1074/Jbc.M204175200 |
0.412 |
|
| 2002 |
Ivleva NB, Sidoruk KV, Pakrasi HB, Shestakov SV. Investigation of the functional role of Ctp proteins in the cyanobacterium Synechocystis sp. PCC 6803 Microbiology. 71: 433-437. DOI: 10.1023/A:1019845610873 |
0.395 |
|
| 2001 |
Zak E, Norling B, Maitra R, Huang F, Andersson B, Pakrasi HB. The initial steps of biogenesis of cyanobacterial photosystems occur in plasma membranes Proceedings of the National Academy of Sciences of the United States of America. 98: 13443-13448. PMID 11687660 DOI: 10.1073/Pnas.241503898 |
0.361 |
|
| 2001 |
Ng WO, Pakrasi HB. DNA photolyase homologs are the major UV resistance factors in the cyanobacterium Synechocystis sp. PCC 6803 Molecular and General Genetics. 264: 924-930. PMID 11254140 DOI: 10.1007/S004380000383 |
0.319 |
|
| 2001 |
Katoh H, Pakrasi H, Ogawa T, Pakrasi M. A zinc transporter in Synechocystis PCC 6803 and DNA microtip analysis of gene expression in response to changes in zinc concentration Science Access. 3. DOI: 10.1071/Sa0403551 |
0.331 |
|
| 2001 |
Kashino Y, Lauber W, Carroll J, Wang Q, Whitmarsh J, Satoh K, Pakrasi H. Characterization of purified His-tagged CP47-containing photosystem II complexes from a cyanobacterium, Synechocystis sp. PCC 6803 Science Access. 3. DOI: 10.1071/Sa0403493 |
0.344 |
|
| 2000 |
Ivleva NB, Shestakov SV, Pakrasi HB. The carboxyl-terminal extension of the precursor D1 protein of photosystem II is required for optimal photosynthetic performance of the cyanobacterium Synechocystis sp. PCC 6803 Plant Physiology. 124: 1403-1411. PMID 11080315 DOI: 10.1104/Pp.124.3.1403 |
0.403 |
|
| 2000 |
Ohkawa H, Pakrasi HB, Ogawa T. Two types of functionally distinct NAD(P)H dehydrogenases in Synechoeystis sp. strain PCC6803 Journal of Biological Chemistry. 275: 31630-31634. PMID 10906128 DOI: 10.1074/Jbc.M003706200 |
0.345 |
|
| 2000 |
Ng WO, Zentella R, Wang Y, Taylor JS, Pakrasi HB. PhrA, the major photoreactivating factor in the cyanobacterium Synechocystis sp. strain PCC 6803 codes for a cyclobutane-pyrimidine-dimer-specific DNA photolyase. Archives of Microbiology. 173: 412-7. PMID 10896222 DOI: 10.1007/S002030000164 |
0.363 |
|
| 2000 |
Zak E, Pakrasi HB. The BtpA protein stabilizes the reaction center proteins of photosystem I in the cyanobacterium Synechocystis sp. PCC 6803 at low temperature Plant Physiology. 123: 215-222. PMID 10806238 DOI: 10.1104/Pp.123.1.215 |
0.371 |
|
| 1999 |
Meetam M, Keren N, Ohad I, Pakrasi HB. The PsbY protein is not essential for oxygenic photosynthesis in the cyanobacterium Synechocystis sp. PCC 6803 Plant Physiology. 121: 1267-1272. PMID 10594113 DOI: 10.1104/Pp.121.4.1267 |
0.43 |
|
| 1999 |
Bartsevich VV, Pakrasi HB. Membrane topology of MntB, the transmembrane protein component of an ABC transporter system for manganese in the cyanobacterium Synechocystis sp. strain PCC 6803 Journal of Bacteriology. 181: 3591-3593. PMID 10348875 DOI: 10.1128/Jb.181.11.3591-3593.1999 |
0.37 |
|
| 1999 |
Elena Z, Norling B, Andersson B, Pakrasi HB. Subcellular localization of the BtpA protein in the cyanobacterium Synechocystis sp. PCC 6803 European Journal of Biochemistry. 261: 311-316. PMID 10103064 DOI: 10.1046/J.1432-1327.1999.00281.X |
0.376 |
|
| 1998 |
Norling B, Zak E, Andersson B, Pakrasi H. 2D-isolation of pure plasma and thylakoid membranes from the cyanobacterium Synechocystis sp. PCC 6803. Febs Letters. 436: 189-92. PMID 9781676 DOI: 10.1016/S0014-5793(98)01123-5 |
0.338 |
|
| 1997 |
McNamara VP, Sutterwala FS, Pakrasi HB, Whitmarsh J. Structural model of cytochrome b559 in photosystem II based on a mutant with genetically fused subunits Proceedings of the National Academy of Sciences of the United States of America. 94: 14173-14178. PMID 9391172 DOI: 10.1073/Pnas.94.25.14173 |
0.362 |
|
| 1997 |
Karnauchov I, Herrmann RG, Pakrasi HB, Klösgen RB. Transport of CtpA protein from the cyanobacterium Synechocystis 6803 across the thylakoid membrane in chloroplasts European Journal of Biochemistry. 249: 497-504. PMID 9370359 DOI: 10.1111/J.1432-1033.1997.T01-1-00497.X |
0.355 |
|
| 1997 |
Bartsevich VV, Pakrasi HB. Molecular identification of a novel protein that regulates biogenesis of photosystem I, a membrane protein complex Journal of Biological Chemistry. 272: 6382-6387. PMID 9045660 DOI: 10.1074/Jbc.272.10.6382 |
0.43 |
|
| 1996 |
Oelmüller R, Herrmann RG, Pakrasi HB. Molecular studies of CtpA, the carboxyl-terminal processing protease for the D1 protein of the photosystem II reaction center in higher plants Journal of Biological Chemistry. 271: 21848-21852. PMID 8702985 DOI: 10.1074/Jbc.271.36.21848 |
0.41 |
|
| 1995 |
Pakrasi HB. Genetic analysis of the form and function of photosystem I and photosystem II Annual Review of Genetics. 29: 755-776. PMID 8825493 DOI: 10.1146/Annurev.Ge.29.120195.003543 |
0.414 |
|
| 1995 |
Ikeuchi M, Shukla VK, Pakrasi HB, noue Y. Directed inactivation of the psbl gene does not affect Photosystem II in the cyanobacterium Synechocystis sp. PCC 6803 Mgg Molecular &Amp; General Genetics. 249: 622-628. PMID 8544827 DOI: 10.1007/BF00418031 |
0.337 |
|
| 1995 |
Bartsevich VV, Pakrasi HB. Molecular identification of an ABC transporter complex for manganese: Analysis of a cyanobacterial mutant strain impaired in the photosynthetic oxygen evolution process Embo Journal. 14: 1845-1853. PMID 7743991 DOI: 10.1002/J.1460-2075.1995.Tb07176.X |
0.426 |
|
| 1995 |
Mor TS, Ohad I, Hirschberg J, Pakrasi HB. An unusual organization of the genes encoding cytochrome b559 in Chlamydomonas reinhardtii: psbE and psbF genes are separately transcribed from different regions of the plastid chromosome Mgg Molecular &Amp; General Genetics. 246: 600-604. PMID 7700232 DOI: 10.1007/Bf00298966 |
0.351 |
|
| 1995 |
Lorković ZJ, Schröder WP, Pakrasi HB, Irrgang KD, Herrmann RG, Oelmüller R. Molecular characterization of PsbW, a nuclear-encoded component of the photosystem II reaction center complex in spinach Proceedings of the National Academy of Sciences of the United States of America. 92: 8930-8934. PMID 7568046 DOI: 10.1073/Pnas.92.19.8930 |
0.387 |
|
| 1994 |
Nyhus KJ, Sonoike K, Pakrasi HB. Nucleotide sequences of the psaA and the psaB genes encoding the reaction center proteins of Photosystem I in Anabaena variabilis ATCC 29413 Bba - Bioenergetics. 1185: 247-251. PMID 8167140 DOI: 10.1016/0005-2728(94)90217-8 |
0.333 |
|
| 1994 |
Anbudurai PR, Mor TS, Ohad I, Shestakov SV, Pakrasi HB. The ctpA gene encodes the C-terminal processing protease for the D1 protein of the photosystem II reaction center complex Proceedings of the National Academy of Sciences of the United States of America. 91: 8082-8086. PMID 8058761 DOI: 10.1073/Pnas.91.17.8082 |
0.41 |
|
| 1994 |
Mannan RM, Pakrasi HB, Sonoike K. The PsaC Protein Is Necessary for the Stable Association of the PsaD, PsaE, and PsaL Proteins in the Photosystem I Complex: Analysis of a Cyanobacterial Mutant Strain Archives of Biochemistry and Biophysics. 315: 68-73. PMID 7979407 DOI: 10.1006/Abbi.1994.1472 |
0.388 |
|
| 1993 |
Anbudurai PR, Pakrasi HB. Mutational analysis of the PsbL protein of photosystem II in the cyanobacterium synechocystis sp. PCC 6803 Zeitschrift Fur Naturforschung - Section C Journal of Biosciences. 48: 267-274. PMID 8512617 DOI: 10.1515/Znc-1993-3-424 |
0.414 |
|
| 1993 |
Nyhus KJ, Thiel T, Pakrasi HB. Targeted interruption of the psaA and psaB genes encoding the reaction-centre proteins of photosystem I in the filamentous cyanobacterium Anabaena variabilis ATCC 29413 Molecular Microbiology. 9: 979-988. PMID 7934924 DOI: 10.1111/J.1365-2958.1993.Tb01227.X |
0.373 |
|
| 1992 |
Shukla VK, Stanbekova GE, Shestakov SV, Pakrasi HB. The D1 protein of the photosystem II reaction-centre complex accumulates in the absence of D2: Analysis of a mutant of the cyanobacterium Synechocystis sp. PCC 6803 lacking cytochrome b559 Molecular Microbiology. 6: 947-956. PMID 1602969 DOI: 10.1111/J.1365-2958.1992.Tb01544.X |
0.351 |
|
| 1992 |
Sonoike K, Ikeuchi M, Pakrasi HB. Presence of an N-terminal presequence in the PsaI protein of the Photosystem I complex in the filamentous cyanobacterium Anabaena variabilis ATCC 29413 Plant Molecular Biology. 20: 987-990. PMID 1463834 DOI: 10.1007/Bf00027168 |
0.353 |
|
| 1992 |
Ikeuchi M, Sonoike K, Koike H, Pakrasi HB, Inoue Y. A novel 3.5 kDa protein component of cyanobacterial photosystem I complexes Plant and Cell Physiology. 33: 1057-1063. DOI: 10.1093/Oxfordjournals.Pcp.A078356 |
0.361 |
|
| 1991 |
Ikeuchi M, Nyhus KJ, Inoue Y, Pakrasi HB. Identities of four low-molecular-mass subunits of the photosystem I complex from Anabaena variabilis ATCC 29413. Evidence for the presence of the psaI gene product in a cyanobacterial complex Febs Letters. 287: 5-9. PMID 1908790 DOI: 10.1016/0014-5793(91)80003-L |
0.355 |
|
| 1991 |
Pakrasi HB, De Ciechi P, Whitmarsh J. Site directed mutagenesis of the heme axial ligands of cytochrome b559 affects the stability of the photosystem II complex Embo Journal. 10: 1619-1627. PMID 1904816 DOI: 10.1002/J.1460-2075.1991.Tb07684.X |
0.328 |
|
| 1991 |
Mannar Mannan R, Whitmarsh J, Nyman P, Pakrasi HB. Directed mutagenesis of an iron-sulfur protein of the photosystem I complex in the filamentous cyanobacterium Anabaena variabilis ATCC 29413 Proceedings of the National Academy of Sciences of the United States of America. 88: 10168-10172. PMID 1658798 DOI: 10.1073/Pnas.88.22.10168 |
0.364 |
|
| 1990 |
Pakrasi HB, Nyhus KJ, Granok H. Targeted Deletion Mutagenesis of the β Subunit of Cytochrome b559 Protein Destabilizes the Reaction Center of Photosystem II Zeitschrift Fur Naturforschung - Section C Journal of Biosciences. 45: 423-429. PMID 2116128 DOI: 10.1515/Znc-1990-0519 |
0.381 |
|
| 1989 |
Hodgson RAJ, Beachy RN, Pakrasi HB. Selective inhibition of photosystem II in spinach by tobacco mosaic virus: An effect of the viral coat protein Febs Letters. 245: 267-270. PMID 2924924 DOI: 10.1016/0014-5793(89)80234-0 |
0.31 |
|
| 1985 |
Pakrasi HB, Goldenberg A, Sherman LA. Membrane Development in the Cyanobacterium, Anacystis nidulans, during Recovery from Iron Starvation. Plant Physiology. 79: 290-5. PMID 16664388 DOI: 10.1104/Pp.79.1.290 |
0.547 |
|
| 1985 |
Pakrasi HB, Riethman HC, Sherman LA. Organization of pigment proteins in the photosystem II complex of the cyanobacterium Anacystis nidulans R2 Proceedings of the National Academy of Sciences of the United States of America. 82: 6903-6907. PMID 3931080 DOI: 10.1073/Pnas.82.20.6903 |
0.735 |
|
| 1985 |
Bricker TM, Pakrasi HB, Sherman LA. Characterization of a spinach photosystem II core preparation isolated by a simplified method Archives of Biochemistry and Biophysics. 237: 170-176. PMID 3882055 DOI: 10.1016/0003-9861(85)90266-8 |
0.727 |
|
| 1984 |
Pakrasi HB, Sherman LA. A Highly Active Oxygen-Evolving Photosystem II Preparation from the Cyanobacterium Anacystis nidulans. Plant Physiology. 74: 742-5. PMID 16663492 DOI: 10.1104/Pp.74.3.742 |
0.549 |
|
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