Cees Dekker - Publications

Affiliations: 
1993- Bionanoscience Delft University of Technology, Delft, Zuid-Holland, Netherlands 
Area:
biophysics of single biomolecules, nanobiology
Website:
http://www.ceesdekker.net/

235 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Barth R, Pradhan B, Kim E, Davidson IF, van der Torre J, Peters JM, Dekker C. Author Correction: Testing pseudotopological and nontopological models for SMC-driven DNA loop extrusion against roadblock-traversal experiments. Scientific Reports. 13: 11616. PMID 37463951 DOI: 10.1038/s41598-023-38687-5  0.781
2023 Barth R, Pradhan B, Kim E, Davidson IF, van der Torre J, Peters JM, Dekker C. Testing pseudotopological and nontopological models for SMC-driven DNA loop extrusion against roadblock-traversal experiments. Scientific Reports. 13: 8100. PMID 37208374 DOI: 10.1038/s41598-023-35359-2  0.796
2023 Kim E, Barth R, Dekker C. Looping the Genome with SMC Complexes. Annual Review of Biochemistry. PMID 37137166 DOI: 10.1146/annurev-biochem-032620-110506  0.572
2022 Holub M, Birnie A, Japaridze A, van der Torre J, Ridder MD, de Ram C, Pabst M, Dekker C. Extracting and characterizing protein-free megabase-pair DNA for experiments. Cell Reports Methods. 2: 100366. PMID 36590691 DOI: 10.1016/j.crmeth.2022.100366  0.318
2022 Pradhan B, Barth R, Kim E, Davidson IF, Bauer B, van Laar T, Yang W, Ryu JK, van der Torre J, Peters JM, Dekker C. SMC complexes can traverse physical roadblocks bigger than their ring size. Cell Reports. 41: 111491. PMID 36261017 DOI: 10.1016/j.celrep.2022.111491  0.801
2022 Kim E, Gonzalez AM, Pradhan B, van der Torre J, Dekker C. Condensin-driven loop extrusion on supercoiled DNA. Nature Structural & Molecular Biology. 29: 719-727. PMID 35835864 DOI: 10.1038/s41594-022-00802-x  0.806
2022 Tišma M, Panoukidou M, Antar H, Soh YM, Barth R, Pradhan B, Barth A, van der Torre J, Michieletto D, Gruber S, Dekker C. ParB proteins can bypass DNA-bound roadblocks via dimer-dimer recruitment. Science Advances. 8: eabn3299. PMID 35767606 DOI: 10.1126/sciadv.abn3299  0.796
2021 Hulleman CN, Thorsen RØ, Kim E, Dekker C, Stallinga S, Rieger B. Simultaneous orientation and 3D localization microscopy with a Vortex point spread function. Nature Communications. 12: 5934. PMID 34635658 DOI: 10.1038/s41467-021-26228-5  0.581
2021 Alfaro JA, Bohländer P, Dai M, Filius M, Howard CJ, van Kooten XF, Ohayon S, Pomorski A, Schmid S, Aksimentiev A, Anslyn EV, Bedran G, Cao C, Chinappi M, Coyaud E, ... Dekker C, et al. The emerging landscape of single-molecule protein sequencing technologies. Nature Methods. 18: 604-617. PMID 34099939 DOI: 10.1038/s41592-021-01143-1  0.435
2021 Ryu JK, Bouchoux C, Liu HW, Kim E, Minamino M, de Groot R, Katan AJ, Bonato A, Marenduzzo D, Michieletto D, Uhlmann F, Dekker C. Bridging-induced phase separation induced by cohesin SMC protein complexes. Science Advances. 7. PMID 33568486 DOI: 10.1126/sciadv.abe5905  0.59
2020 Japaridze A, Gogou C, Kerssemakers JWJ, Nguyen HM, Dekker C. Direct observation of independently moving replisomes in Escherichia coli. Nature Communications. 11: 3109. PMID 32561741 DOI: 10.1038/S41467-020-16946-7  0.302
2020 Kim E, Kerssemakers J, Shaltiel IA, Haering CH, Dekker C. DNA-loop extruding condensin complexes can traverse one another. Nature. PMID 32132705 DOI: 10.1038/S41586-020-2067-5  0.654
2019 Elbatsh AMO, Kim E, Eeftens JM, Raaijmakers JA, van der Weide RH, García-Nieto A, Bravo S, Ganji M, Uit de Bos J, Teunissen H, Medema RH, de Wit E, Haering CH, Dekker C, Rowland BD. Distinct Roles for Condensin's Two ATPase Sites in Chromosome Condensation. Molecular Cell. PMID 31629658 DOI: 10.1016/J.Molcel.2019.09.020  0.581
2019 Restrepo-Pérez L, Huang G, Bohländer PR, Worp N, Eelkema R, Maglia G, Joo C, Dekker C. Resolving Chemical Modifications to a Single Amino Acid within a Peptide Using a Biological Nanopore. Acs Nano. PMID 31536327 DOI: 10.1021/Acsnano.9B05156  0.303
2019 Wu F, Swain P, Kuijpers L, Zheng X, Felter K, Guurink M, Solari J, Jun S, Shimizu TS, Chaudhuri D, Mulder B, Dekker C. Cell Boundary Confinement Sets the Size and Position of the E. coli Chromosome. Current Biology : Cb. PMID 31155353 DOI: 10.1016/J.Cub.2019.05.015  0.302
2019 Hol FJH, Whitesides GM, Dekker C. Bacteria-in-paper, a versatile platform to study bacterial ecology. Ecology Letters. PMID 31099139 DOI: 10.1111/Ele.13274  0.402
2019 Wu F, Japaridze A, Zheng X, Wiktor J, Kerssemakers JWJ, Dekker C. Direct imaging of the circular chromosome in a live bacterium. Nature Communications. 10: 2194. PMID 31097704 DOI: 10.1038/S41467-019-10221-0  0.321
2019 Kabiri Y, Ravelli RBG, Lehnert T, Qi H, Katan AJ, Roest N, Kaiser U, Dekker C, Peters PJ, Zandbergen H. Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques. Scientific Reports. 9: 7218. PMID 31076614 DOI: 10.1038/S41598-019-43687-5  0.363
2019 Fanalista F, Birnie A, Maan R, Burla F, Charles K, Pawlik G, Deshpande S, Koenderink GH, Dogterom M, Dekker C. Shape and Size Control of Artificial Cells for Bottom-Up Biology. Acs Nano. PMID 31074603 DOI: 10.1021/Acsnano.9B00220  0.302
2019 Deshpande S, Brandenburg F, Lau A, Last MGF, Spoelstra WK, Reese L, Wunnava S, Dogterom M, Dekker C. Spatiotemporal control of coacervate formation within liposomes. Nature Communications. 10: 1800. PMID 30996302 DOI: 10.1038/S41467-019-09855-X  0.306
2019 Zhao S, Restrepo-Pérez L, Soskine M, Maglia G, Joo C, Dekker C, Aksimentiev A. Electro-Mechanical Conductance Modulation of a Nanopore Using a Removable Gate. Acs Nano. PMID 30715850 DOI: 10.1021/Acsnano.8B09266  0.305
2019 Tans SJ, Dekker C. Potential modulations along carbon nanotubes Nature. 404: 834-5. PMID 10786780 DOI: 10.1038/35009026  0.308
2019 Schmid S, Stoemmer P, Dietz H, Dekker C. High Bandwidth Sensing of Single Protein Dynamics using Nanopores and DNA Origami Biophysical Journal. 116: 341a-342a. DOI: 10.1016/J.Bpj.2018.11.1861  0.402
2018 Kim SH, Ganji M, Kim E, van der Torre J, Abbondanzieri E, Dekker C. DNA sequence encodes the position of DNA supercoils. Elife. 7. PMID 30523779 DOI: 10.7554/Elife.36557  0.65
2018 Verschueren DV, Pud S, Shi X, De Angelis L, Kuipers L, Dekker C. Label-Free Optical Detection of DNA Translocations Through Plasmonic Nanopores. Acs Nano. PMID 30512931 DOI: 10.1021/Acsnano.8B06758  0.348
2018 Kabiri Y, Angelin A, Ahmed I, Mutlu H, Bauer J, Niemeyer CM, Zandbergen H, Dekker C. Intercalating electron dyes for TEM visualization of DNA at the single-molecule level. Chembiochem : a European Journal of Chemical Biology. PMID 30501011 DOI: 10.1002/Cbic.201800638  0.397
2018 Shi X, Verschueren DV, Dekker C. Active Delivery of Single DNA Molecules into a Plasmonic Nanopore for Label-Free Optical Sensing. Nano Letters. PMID 30460853 DOI: 10.1021/Acs.Nanolett.8B04146  0.32
2018 Restrepo-Pérez L, Joo C, Dekker C. Paving the way to single-molecule protein sequencing. Nature Nanotechnology. 13: 786-796. PMID 30190617 DOI: 10.1038/S41565-018-0236-6  0.309
2018 Yang W, Restrepo-Pérez L, Bengtson M, Heerema SJ, Birnie A, van der Torre J, Dekker C. Detection of CRISPR-dCas9 on DNA with solid-state nanopores. Nano Letters. PMID 30187755 DOI: 10.1021/Acs.Nanolett.8B02968  0.38
2018 Cadinu P, Campolo G, Pud S, Yang W, Edel JB, Dekker C, Ivanov AP. Double barrel nanopores as a new tool for controlling single-molecule transport. Nano Letters. PMID 29569930 DOI: 10.1021/Acs.Nanolett.8B00860  0.35
2018 Caspi Y, Dekker C. Dividing the Archaeal Way: The Ancient Cdv Cell-Division Machinery. Frontiers in Microbiology. 9: 174. PMID 29551994 DOI: 10.3389/Fmicb.2018.00174  0.303
2018 Ketterer P, Ananth AN, Laman Trip DS, Mishra A, Bertosin E, Ganji M, van der Torre J, Onck P, Dietz H, Dekker C. DNA origami scaffold for studying intrinsically disordered proteins of the nuclear pore complex. Nature Communications. 9: 902. PMID 29500415 DOI: 10.1038/S41467-018-03313-W  0.373
2018 Heerema SJ, Vicarelli L, Pud S, Schouten RN, Zandbergen HW, Dekker C. Probing DNA translocations with Inplane Current Signals in a Graphene Nanoribbon with a Nanopore. Acs Nano. PMID 29474060 DOI: 10.1021/Acsnano.7B08635  0.32
2018 Ganji M, Shaltiel IA, Bisht S, Kim E, Kalichava A, Haering CH, Dekker C. Real-time imaging of DNA loop extrusion by condensin. Science (New York, N.Y.). PMID 29472443 DOI: 10.1126/Science.Aar7831  0.654
2018 Kim SH, Ganji M, Kim E, Torre Jvd, Abbondanzieri E, Dekker C. Author response: DNA sequence encodes the position of DNA supercoils Elife. DOI: 10.7554/Elife.36557.055  0.365
2017 Wiktor J, van der Does M, Büller L, Sherratt DJ, Dekker C. Direct observation of end resection by RecBCD during double-stranded DNA break repair in vivo. Nucleic Acids Research. PMID 29294118 DOI: 10.1093/Nar/Gkx1290  0.414
2017 Shi X, Verschueren D, Pud S, Dekker C. Integrating Sub-3 nm Plasmonic Gaps into Solid-State Nanopores. Small (Weinheim An Der Bergstrasse, Germany). PMID 29251411 DOI: 10.1002/Smll.201703307  0.34
2017 Eeftens J, Dekker C. Catching DNA with hoops-biophysical approaches to clarify the mechanism of SMC proteins. Nature Structural & Molecular Biology. 24: 1012-1020. PMID 29215640 DOI: 10.1038/Nsmb.3507  0.365
2017 Eeftens JM, Bisht S, Kerssemakers J, Kschonsak M, Haering CH, Dekker C. Real-time detection of condensin-driven DNA compaction reveals a multistep binding mechanism. The Embo Journal. PMID 29118001 DOI: 10.15252/Embj.201797596  0.431
2017 Terakawa T, Bisht S, Eeftens JM, Dekker C, Haering CH, Greene EC. The condensin complex is a mechanochemical motor that translocates along DNA. Science (New York, N.Y.). PMID 28882993 DOI: 10.1126/Science.Aan6516  0.364
2017 Restrepo-Pérez L, John S, Aksimentiev A, Joo C, Dekker C. SDS-assisted protein transport through solid-state nanopores. Nanoscale. PMID 28776058 DOI: 10.1039/C7Nr02450A  0.343
2017 Kabiri Y, Ananth AN, van der Torre J, Katan A, Hong JY, Malladi S, Kong J, Zandbergen H, Dekker C. Distortion of DNA Origami on Graphene Imaged with Advanced TEM Techniques. Small (Weinheim An Der Bergstrasse, Germany). PMID 28620911 DOI: 10.1002/Smll.201700876  0.346
2017 Burnham DR, Nijholt B, De Vlaminck I, Quan J, Yusufzai T, Dekker C. Annealing helicase HARP closes RPA-stabilized DNA bubbles non-processively. Nucleic Acids Research. PMID 28334870 DOI: 10.1093/Nar/Gkx147  0.411
2017 Nechemia-Arbely Y, Fachinetti D, Miga KH, Sekulic N, Soni GV, Kim DH, Wong AK, Lee AY, Nguyen K, Dekker C, Ren B, Black BE, Cleveland DW. Human centromeric CENP-A chromatin is a homotypic, octameric nucleosome at all cell cycle points. The Journal of Cell Biology. PMID 28235947 DOI: 10.1083/Jcb.201608083  0.318
2017 Vlijm R, Kim SH, De Zwart PL, Dalal Y, Dekker C. The supercoiling state of DNA determines the handedness of both H3 and CENP-A nucleosomes. Nanoscale. PMID 28094382 DOI: 10.1039/C6Nr06245H  0.375
2017 Restrepo-Perez L, Soskine M, John S, Aksimentiev A, Maglia G, Joo C, Dekker C. Single-Molecule Protein Fingerprinting with Nanopores Biophysical Journal. 112: 330a. DOI: 10.1016/J.Bpj.2016.11.1789  0.32
2017 Hyun Kim S, Ganji M, van der Torre J, Abbondanzieri E, Dekker C. DNA Sequence can Pin the Position of DNA Supercoils Biophysical Journal. 112: 214a. DOI: 10.1016/J.Bpj.2016.11.1182  0.418
2016 Pud S, Chao SH, Belkin M, Verschueren D, Huijben T, van Engelenburg C, Dekker C, Aksimentiev A. Mechanical Trapping of DNA in a Double-Nanopore System. Nano Letters. 16: 8021-8028. PMID 27960493 DOI: 10.1021/Acs.Nanolett.6B04642  0.448
2016 Kim SH, Vlijm R, van der Torre J, Dalal Y, Dekker C. CENP-A and H3 Nucleosomes Display a Similar Stability to Force-Mediated Disassembly. Plos One. 11: e0165078. PMID 27820823 DOI: 10.1371/Journal.Pone.0165078  0.32
2016 Plesa C, Verschueren D, Pud S, van der Torre J, Ruitenberg JW, Witteveen MJ, Jonsson MP, Grosberg AY, Rabin Y, Dekker C. Direct observation of DNA knots using a solid-state nanopore. Nature Nanotechnology. PMID 27525473 DOI: 10.1038/Nnano.2016.153  0.815
2016 Ganji M, Kim SH, van der Torre J, Abbondanzieri E, Dekker C. Intercalation-based single-molecule fluorescence assay to study DNA supercoil dynamics. Nano Letters. PMID 27356180 DOI: 10.1021/Acs.Nanolett.6B02213  0.433
2016 Wiktor J, Lesterlin C, Sherratt DJ, Dekker C. CRISPR-mediated control of the bacterial initiation of replication. Nucleic Acids Research. PMID 27036863 DOI: 10.1093/Nar/Gkw214  0.343
2016 Eeftens JM, Katan AJ, Kschonsak M, Hassler M, de Wilde L, Dief EM, Haering CH, Dekker C. Condensin Smc2-Smc4 Dimers Are Flexible and Dynamic. Cell Reports. PMID 26904946 DOI: 10.1016/J.Celrep.2016.01.063  0.311
2016 Hol FJ, Rotem O, Jurkevitch E, Dekker C, Koster DA. Bacterial predator-prey dynamics in microscale patchy landscapes. Proceedings. Biological Sciences / the Royal Society. 283. PMID 26865299 DOI: 10.1098/Rspb.2015.2154  0.686
2016 Heerema SJ, Dekker C. Graphene nanodevices for DNA sequencing. Nature Nanotechnology. 11: 127-36. PMID 26839258 DOI: 10.1038/Nnano.2015.307  0.308
2016 Hyun Kim S, Vlijm R, de Zwart P, der Torre Jv, Dalal Y, Dekker C. The Handedness of Nucleosomes is Governed by the Supercoiling of DNA Biophysical Journal. 110: 70a. DOI: 10.1016/J.Bpj.2015.11.440  0.361
2016 Wiktor J, Lesterlin C, Sherratt D, Dekker C. Bacterial Cell Cycle Control by Modified CRISPR Binding Biophysical Journal. 110: 62a. DOI: 10.1016/J.Bpj.2015.11.400  0.371
2016 Hyun Kim S, Ganji M, van J, Torre d, Abbondanzieri E, Dekker C. The Occurrence of Plectonemes in Supercoiled DNA Depends on DNA Sequence Biophysical Journal. 110: 563a. DOI: 10.1016/J.Bpj.2015.11.3013  0.443
2016 Ordu O, Vlijm R, Lee M, Lusser A, Dekker C, Dekker NH. Investigating the Handedness Dynamics of Tetrasomes Biophysical Journal. 110: 562a. DOI: 10.1016/J.Bpj.2015.11.3007  0.36
2016 Eeftens J, Katan A, Kschonsak M, Hassler M, Dief E, de Wilde L, Haering C, Dekker C. Single-Molecule Experiments to Resolve Structural and Mechanical Properties of Condensin Biophysical Journal. 110: 528a. DOI: 10.1016/J.Bpj.2015.11.2826  0.387
2015 Vlijm R, V D Torre J, Dekker C. Counterintuitive DNA Sequence Dependence in Supercoiling-Induced DNA Melting. Plos One. 10: e0141576. PMID 26513573 DOI: 10.1371/Journal.Pone.0141576  0.418
2015 Eeftens JM, van der Torre J, Burnham DR, Dekker C. Copper-free click chemistry for attachment of biomolecules in magnetic tweezers. Bmc Biophysics. 8: 9. PMID 26413268 DOI: 10.1186/S13628-015-0023-9  0.323
2015 Belkin M, Chao SH, Jonsson MP, Dekker C, Aksimentiev A. Plasmonic Nanopores for Trapping, Controlling Displacement and Sequencing of DNA Molecules. Acs Nano. PMID 26401685 DOI: 10.1021/Acsnano.5B04173  0.686
2015 Pud S, Verschueren D, Vukovic N, Plesa C, Jonsson MP, Dekker C. Self-Aligned Plasmonic Nanopores by Optically Controlled Dielectric Breakdown. Nano Letters. PMID 26333767 DOI: 10.1021/Acs.Nanolett.5B03239  0.771
2015 Plesa C, van Loo N, Dekker C. DNA nanopore translocation in glutamate solutions. Nanoscale. 7: 13605-9. PMID 26206066 DOI: 10.1039/C5Nr02793D  0.768
2015 Hol FJ, Hubert B, Dekker C, Keymer JE. Density-dependent adaptive resistance allows swimming bacteria to colonize an antibiotic gradient. The Isme Journal. PMID 26140531 DOI: 10.1038/Ismej.2015.107  0.756
2015 Wu F, Van Rijn E, Van Schie BG, Keymer JE, Dekker C. Multi-color imaging of the bacterial nucleoid and division proteins with blue, orange, and near-infrared fluorescent proteins. Frontiers in Microbiology. 6: 607. PMID 26136737 DOI: 10.3389/Fmicb.2015.00607  0.669
2015 Wu F, van Schie BG, Keymer JE, Dekker C. Symmetry and scale orient Min protein patterns in shaped bacterial sculptures. Nature Nanotechnology. PMID 26098227 DOI: 10.1038/Nnano.2015.126  0.681
2015 Hol FJ, Galajda P, Woolthuis RG, Dekker C, Keymer JE. The idiosyncrasy of spatial structure in bacterial competition. Bmc Research Notes. 8: 245. PMID 26081497 DOI: 10.1186/S13104-015-1169-X  0.765
2015 Verschueren DV, Jonsson MP, Dekker C. Temperature dependence of DNA translocations through solid-state nanopores. Nanotechnology. 26: 234004. PMID 25994084 DOI: 10.1088/0957-4484/26/23/234004  0.679
2015 Plesa C, Ruitenberg JW, Witteveen MJ, Dekker C. Detection of Individual Proteins Bound along DNA Using Solid-State Nanopores. Nano Letters. 15: 3153-8. PMID 25928590 DOI: 10.1021/Acs.Nanolett.5B00249  0.797
2015 Blosser TR, Loeff L, Westra ER, Vlot M, Künne T, Sobota M, Dekker C, Brouns SJ, Joo C. Two distinct DNA binding modes guide dual roles of a CRISPR-Cas protein complex. Molecular Cell. 58: 60-70. PMID 25752578 DOI: 10.1016/J.Molcel.2015.01.028  0.311
2015 Plesa C, Dekker C. Data analysis methods for solid-state nanopores. Nanotechnology. 26: 084003. PMID 25648179 DOI: 10.1088/0957-4484/26/8/084003  0.742
2015 Vlijm R, Mashaghi A, Bernard S, Modesti M, Dekker C. Experimental phase diagram of negatively supercoiled DNA measured by magnetic tweezers and fluorescence. Nanoscale. 7: 3205-16. PMID 25615283 DOI: 10.1039/C4Nr04332D  0.42
2015 Vlijm R, Lee M, Lipfert J, Lusser A, Dekker C, Dekker NH. Nucleosome assembly dynamics involve spontaneous fluctuations in the handedness of tetrasomes. Cell Reports. 10: 216-25. PMID 25578730 DOI: 10.1016/J.Celrep.2014.12.022  0.394
2015 Li Y, Nicoli F, Chen C, Lagae L, Groeseneken G, Stakenborg T, Zandbergen HW, Dekker C, Van Dorpe P, Jonsson MP. Photoresistance switching of plasmonic nanopores. Nano Letters. 15: 776-82. PMID 25514824 DOI: 10.1021/Nl504516D  0.603
2015 Plesa C, van Loo N, Ketterer P, Dietz H, Dekker C. Velocity of DNA during translocation through a solid-state nanopore. Nano Letters. 15: 732-7. PMID 25496458 DOI: 10.1021/Nl504375C  0.799
2015 Katan AJ, Vlijm R, Lusser A, Dekker C. Dynamics of nucleosomal structures measured by high-speed atomic force microscopy. Small (Weinheim An Der Bergstrasse, Germany). 11: 976-84. PMID 25336288 DOI: 10.1002/Smll.201401318  0.382
2015 Muthukumar M, Plesa C, Dekker C. Single-molecule sensing with nanopores Physics Today. 68: 40-46. DOI: 10.1063/Pt.3.2881  0.778
2015 Plesa C, Verschueren D, Ruitenberg JW, Witteveen MJ, Jonsson MP, Grosberg AY, Rabin Y, Dekker C. Observation of DNA Knots Using Solid-State Nanopores Biophysical Journal. 108: 166a. DOI: 10.1016/J.Bpj.2014.11.913  0.816
2015 Vlijm R, Dalal Y, Dekker C. Torque Mediated Kinetics of CENP-A Nucleosomes Reveals Resilience to Tension Biophysical Journal. 108: 539a. DOI: 10.1016/J.Bpj.2014.11.2954  0.344
2015 Wu F, van Schie b, Keymer J, Dekker C. Symmetry and Scale Orient Min Oscillation Patterns in Bacterial Shape Sculptures Biophysical Journal. 108: 364a. DOI: 10.1016/J.Bpj.2014.11.1997  0.688
2014 Nicoli F, Verschueren D, Klein M, Dekker C, Jonsson MP. DNA translocations through solid-state plasmonic nanopores. Nano Letters. 14: 6917-25. PMID 25347403 DOI: 10.1021/Nl503034J  0.687
2014 Hol FJ, Dekker C. Zooming in to see the bigger picture: microfluidic and nanofabrication tools to study bacteria. Science (New York, N.Y.). 346: 1251821. PMID 25342809 DOI: 10.1126/Science.1251821  0.716
2014 Burnham DR, De Vlaminck I, Henighan T, Dekker C. Skewed brownian fluctuations in single-molecule magnetic tweezers. Plos One. 9: e108271. PMID 25265383 DOI: 10.1371/Journal.Pone.0108271  0.375
2014 Hol FJ, Voges MJ, Dekker C, Keymer JE. Nutrient-responsive regulation determines biodiversity in a colicin-mediated bacterial community. Bmc Biology. 12: 68. PMID 25159553 DOI: 10.1186/S12915-014-0068-2  0.766
2014 Plesa C, Ananth AN, Linko V, Gülcher C, Katan AJ, Dietz H, Dekker C. Ionic permeability and mechanical properties of DNA origami nanoplates on solid-state nanopores. Acs Nano. 8: 35-43. PMID 24295288 DOI: 10.1021/Nn405045X  0.792
2014 Katan A, Hoogeboom-Vlijm R, Lusser A, Dekker C. Dynamics of NAP1-Assisted Nucleosome Assembly Imaged with High-Speed Atomic Force Microscopy Biophysical Journal. 106: 429a. DOI: 10.1016/J.Bpj.2013.11.2416  0.344
2014 Plesa C, Ruitenberg JW, Witteveen MJ, Dekker C. Detection of Single Proteins Bound along DNA with Solid-State Nanopores Biophysical Journal. 106: 395a. DOI: 10.1016/J.Bpj.2013.11.2230  0.796
2014 Blosser T, Westra E, Loeff L, Dekker C, Brouns S, Joo C. Defense Against Viral Attack: Single-Molecule View on a Bacterial Adaptive Immune System Biophysical Journal. 106: 22a. DOI: 10.1016/J.Bpj.2013.11.178  0.338
2014 Wu F, van Schie B, van Rijn E, Keymer JE, Dekker C. Symmetry Breaking and Plasticity of Min Protein Oscillators in Living Bacteria Sculptured into Defined Geometries Biophysical Journal. 106: 188a. DOI: 10.1016/J.Bpj.2013.11.1123  0.691
2013 Plesa C, Cornelissen L, Tuijtel MW, Dekker C. Non-equilibrium folding of individual DNA molecules recaptured up to 1000 times in a solid state nanopore. Nanotechnology. 24: 475101. PMID 24177388 DOI: 10.1088/0957-4484/24/47/475101  0.791
2013 Hol FJ, Galajda P, Nagy K, Woolthuis RG, Dekker C, Keymer JE. Spatial structure facilitates cooperation in a social dilemma: empirical evidence from a bacterial community. Plos One. 8: e77042. PMID 24167557 DOI: 10.1371/Journal.Pone.0077042  0.766
2013 Schneider GF, Xu Q, Hage S, Luik S, Spoor JN, Malladi S, Zandbergen H, Dekker C. Tailoring the hydrophobicity of graphene for its use as nanopores for DNA translocation. Nature Communications. 4: 2619. PMID 24126320 DOI: 10.1038/Ncomms3619  0.304
2013 van Loenhout MT, De Vlaminck I, Flebus B, den Blanken JF, Zweifel LP, Hooning KM, Kerssemakers JW, Dekker C. Scanning a DNA molecule for bound proteins using hybrid magnetic and optical tweezers. Plos One. 8: e65329. PMID 23755219 DOI: 10.1371/Journal.Pone.0065329  0.436
2013 Jonsson MP, Dekker C. Plasmonic nanopore for electrical profiling of optical intensity landscapes. Nano Letters. 13: 1029-33. PMID 23402575 DOI: 10.1021/Nl304213S  0.613
2013 Plesa C, Kowalczyk SW, Zinsmeester R, Grosberg AY, Rabin Y, Dekker C. Fast translocation of proteins through solid state nanopores Nano Letters. 13: 658-663. PMID 23343345 DOI: 10.1021/Nl3042678  0.761
2013 Soni GV, Jonsson MP, Dekker C. Periodic modulations of optical tweezers near solid-state membranes. Small (Weinheim An Der Bergstrasse, Germany). 9: 679-84. PMID 23129349 DOI: 10.1002/Smll.201201875  0.599
2013 Plesa C, Kowalczyk SW, Zinsmeester R, Grosberg AY, Rabin Y, Dekker C. Correction to Fast Translocation of Proteins through Solid State Nanopores Nano Letters. 13: 3445-3445. DOI: 10.1021/Nl4019269  0.748
2013 Vlijm R, Burnham DR, Bernard S, Modesti M, Dekker C. Real Time Visualization of hRPA Binding to Torsionally Controlled Double-Stranded DNA Biophysical Journal. 104: 73a. DOI: 10.1016/J.Bpj.2012.11.442  0.385
2013 Soni G, Dekker C. Optical Tweezers Controlled Nanopore Detection of Nucleosomes along a DNA Biophysical Journal. 104: 581a. DOI: 10.1016/J.Bpj.2012.11.3225  0.422
2012 Janssen XJ, Jonsson MP, Plesa C, Soni GV, Dekker C, Dekker NH. Rapid manufacturing of low-noise membranes for nanopore sensors by trans-chip illumination lithography. Nanotechnology. 23: 475302. PMID 23103750 DOI: 10.1088/0957-4484/23/47/475302  0.768
2012 Vlijm R, Smitshuijzen JS, Lusser A, Dekker C. NAP1-assisted nucleosome assembly on DNA measured in real time by single-molecule magnetic tweezers. Plos One. 7: e46306. PMID 23050009 DOI: 10.1371/Journal.Pone.0046306  0.374
2012 van Loenhout MT, de Grunt MV, Dekker C. Dynamics of DNA supercoils. Science (New York, N.Y.). 338: 94-7. PMID 22983709 DOI: 10.1126/Science.1225810  0.393
2012 De Vlaminck I, Henighan T, van Loenhout MT, Burnham DR, Dekker C. Magnetic forces and DNA mechanics in multiplexed magnetic tweezers. Plos One. 7: e41432. PMID 22870220 DOI: 10.1371/Journal.Pone.0041432  0.346
2012 Kowalczyk SW, Dekker C. Measurement of the docking time of a DNA molecule onto a solid-state nanopore. Nano Letters. 12: 4159-63. PMID 22803839 DOI: 10.1021/Nl301719A  0.404
2012 De Vlaminck I, van Loenhout MT, Zweifel L, den Blanken J, Hooning K, Hage S, Kerssemakers J, Dekker C. Mechanism of homology recognition in DNA recombination from dual-molecule experiments. Molecular Cell. 46: 616-24. PMID 22560720 DOI: 10.1016/J.Molcel.2012.03.029  0.398
2012 Soni GV, Dekker C. Detection of nucleosomal substructures using solid-state nanopores. Nano Letters. 12: 3180-6. PMID 22554358 DOI: 10.1021/Nl301163M  0.369
2012 Hall AR, Keegstra JM, Duch MC, Hersam MC, Dekker C. Measuring single-wall carbon nanotubes with solid-state nanopores. Methods in Molecular Biology (Clifton, N.J.). 870: 227-39. PMID 22528267 DOI: 10.1007/978-1-61779-773-6_13  0.354
2012 Männik J, Wu F, Hol FJ, Bisicchia P, Sherratt DJ, Keymer JE, Dekker C. Robustness and accuracy of cell division in Escherichia coli in diverse cell shapes. Proceedings of the National Academy of Sciences of the United States of America. 109: 6957-62. PMID 22509007 DOI: 10.1073/Pnas.1120854109  0.776
2012 Schneider GF, Dekker C. DNA sequencing with nanopores. Nature Biotechnology. 30: 326-8. PMID 22491281 DOI: 10.1038/Nbt.2181  0.355
2012 De Vlaminck I, Dekker C. Recent advances in magnetic tweezers. Annual Review of Biophysics. 41: 453-72. PMID 22443989 DOI: 10.1146/Annurev-Biophys-122311-100544  0.334
2012 Kowalczyk SW, Wells DB, Aksimentiev A, Dekker C. Slowing down DNA translocation through a nanopore in lithium chloride. Nano Letters. 12: 1038-44. PMID 22229707 DOI: 10.1021/Nl204273H  0.421
2012 Kowalczyk SW, Grosberg AY, Rabin Y, Dekker C. Reply to 'Comment on Modeling the conductance and DNA blockade of solid-state nanopores' Nanotechnology. 23. DOI: 10.1088/0957-4484/23/8/088002  0.353
2012 Burnham DR, De Vlaminck I, Henighan T, van Loenhout MT, Pfeiffer I, Huijts J, Kerssemakers J, van Langen-Suurling A, van der Drift E, Wyman C, Dekker C. Highly Parallel Magnetic Tweezers for the Study of DNA-Protein Interactions Biophysical Journal. 102: 178a. DOI: 10.1016/J.Bpj.2011.11.968  0.41
2012 Soni G, Wester L, Vlijm R, Dekker C. Nucleosome Detection using Solid State Nanopores Biophysical Journal. 102: 730a. DOI: 10.1016/J.Bpj.2011.11.3960  0.413
2012 Schneider GF, Xu Q, Song B, Luik S, Kowalczyk S, Calado V, Yue Wu M, Pandraud G, Maldi S, Zandbergen H, Dekker C. Translocating Single-Stranded DNA through Crystalline Graphene Nanopores Biophysical Journal. 102: 728a. DOI: 10.1016/J.Bpj.2011.11.3951  0.369
2012 Mannik J, Wu F, Hol FJ, Keymer JE, Dekker C. Localization of the Escherichia Coli Divisome by Nucleoid Occlusion and Membrane Curvature Biophysical Journal. 102: 475a. DOI: 10.1016/J.Bpj.2011.11.2605  0.778
2012 Dekker C. Translocation of DNA-Protein Complexes through Solid-State Nanopores Biophysical Journal. 102: 429a. DOI: 10.1016/J.Bpj.2011.11.2350  0.428
2011 De Vlaminck I, Henighan T, van Loenhout MT, Pfeiffer I, Huijts J, Kerssemakers JW, Katan AJ, van Langen-Suurling A, van der Drift E, Wyman C, Dekker C. Highly parallel magnetic tweezers by targeted DNA tethering. Nano Letters. 11: 5489-93. PMID 22017420 DOI: 10.1021/Nl203299E  0.408
2011 Kowalczyk SW, Grosberg AY, Rabin Y, Dekker C. Modeling the conductance and DNA blockade of solid-state nanopores Nanotechnology. 22. PMID 21730759 DOI: 10.1088/0957-4484/22/31/315101  0.345
2011 Kowalczyk SW, Kapinos L, Blosser TR, Magalhães T, van Nies P, Lim RY, Dekker C. Single-molecule transport across an individual biomimetic nuclear pore complex. Nature Nanotechnology. 6: 433-8. PMID 21685911 DOI: 10.1038/Nnano.2011.88  0.321
2011 Hall AR, Keegstra JM, Duch MC, Hersam MC, Dekker C. Translocation of single-wall carbon nanotubes through solid-state nanopores. Nano Letters. 11: 2446-50. PMID 21574581 DOI: 10.1021/Nl200873W  0.366
2011 Dekker C, Kowalczyk S, Kapinos L, Lim RY. In Vitro Measurements of Single-Molecule Transport Across an Individual Biomimetic Nuclear Pore Complex Biophysical Journal. 100: 521a. DOI: 10.1016/J.Bpj.2010.12.3048  0.323
2011 De Vlaminck I, vanLoenhout MT, Zweifel L, den Blanken J, Kerssemakers JW, Hage S, Dekker C. Dual Molecule Assay to Investigate the Mechanics of Homology Search and Recognition in Recombination Biophysical Journal. 100: 10a. DOI: 10.1016/J.Bpj.2010.12.266  0.399
2011 De Vlaminck I, Yusufzai T, van Loenhout MT, Vidic I, Kanaar R, Lebbink JH, Kadonaga JT, Dekker C. Annealing Helicase HARP: A Single Molecule Study Biophysical Journal. 100: 240a. DOI: 10.1016/J.Bpj.2010.12.1529  0.377
2011 Mannik J, Wu F, Hol FJ, Keymer JE, Dekker C. Chromatin Distribution Guides Cell Division in E. Coli Biophysical Journal. 100: 192a-193a. DOI: 10.1016/J.Bpj.2010.12.1269  0.793
2011 Hall A, Scott A, Rotem D, Mehta K, Bayley H, Dekker C. Hybrid Biological/Solid-State Nanopores Biophysical Journal. 100: 168a. DOI: 10.1016/J.Bpj.2010.12.1137  0.365
2010 Hall AR, Scott A, Rotem D, Mehta KK, Bayley H, Dekker C. Hybrid pore formation by directed insertion of α-haemolysin into solid-state nanopores. Nature Nanotechnology. 5: 874-7. PMID 21113160 DOI: 10.1038/Nnano.2010.237  0.378
2010 Heller I, Chatoor S, Männik J, Zevenbergen MA, Dekker C, Lemay SG. Influence of electrolyte composition on liquid-gated carbon nanotube and graphene transistors. Journal of the American Chemical Society. 132: 17149-56. PMID 21077655 DOI: 10.1021/Ja104850N  0.566
2010 Schneider GF, Kowalczyk SW, Calado VE, Pandraud G, Zandbergen HW, Vandersypen LM, Dekker C. DNA translocation through graphene nanopores. Nano Letters. 10: 3163-7. PMID 20608744 DOI: 10.1021/Nl102069Z  0.404
2010 Heller I, Chatoor S, Männik J, Zevenbergen MA, Oostinga JB, Morpurgo AF, Dekker C, Lemay SG. Charge noise in graphene transistors. Nano Letters. 10: 1563-7. PMID 20373788 DOI: 10.1021/Nl903665G  0.537
2010 Kowalczyk SW, Tuijtel MW, Donkers SP, Dekker C. Unraveling single-stranded DNA in a solid-state nanopore. Nano Letters. 10: 1414-20. PMID 20235508 DOI: 10.1021/Nl100271C  0.426
2010 van den Hout M, Hall AR, Wu MY, Zandbergen HW, Dekker C, Dekker NH. Controlling nanopore size, shape and stability. Nanotechnology. 21: 115304. PMID 20173233 DOI: 10.1088/0957-4484/21/11/115304  0.318
2010 Stein D, Deurvorst Z, van der Heyden FH, Koopmans WJ, Gabel A, Dekker C. Electrokinetic concentration of DNA polymers in nanofluidic channels. Nano Letters. 10: 765-72. PMID 20151696 DOI: 10.1021/Nl902228P  0.569
2010 Kowalczyk SW, Hall AR, Dekker C. Detection of local protein structures along DNA using solid-state nanopores. Nano Letters. 10: 324-8. PMID 19902919 DOI: 10.1021/Nl903631M  0.451
2010 Mannik J, Galajda P, Keymer JE, Dekker C. Morphogenesis and Cell Division of E. Coli Under Mechanical Confinement Biophysical Journal. 98: 416a-417a. DOI: 10.1016/J.Bpj.2009.12.2249  0.679
2009 Hall AR, van Dorp S, Lemay SG, Dekker C. Electrophoretic force on a protein-coated DNA molecule in a solid-state nanopore. Nano Letters. 9: 4441-5. PMID 19780587 DOI: 10.1021/Nl9027318  0.642
2009 Männik J, Driessen R, Galajda P, Keymer JE, Dekker C. Bacterial growth and motility in sub-micron constrictions. Proceedings of the National Academy of Sciences of the United States of America. 106: 14861-6. PMID 19706420 DOI: 10.1073/Pnas.0907542106  0.663
2009 Heller I, Smaal WT, Lemay SG, Dekker C. Probing macrophage activity with carbon-nanotube sensors. Small (Weinheim An Der Bergstrasse, Germany). 5: 2528-32. PMID 19697305 DOI: 10.1002/Smll.200900823  0.581
2009 Skinner GM, van den Hout M, Broekmans O, Dekker C, Dekker NH. Distinguishing single- and double-stranded nucleic acid molecules using solid-state nanopores. Nano Letters. 9: 2953-60. PMID 19537802 DOI: 10.1021/Nl901370W  0.355
2009 Keyser UF, van der Does J, Dekker C, Dekker NH. Inserting and manipulating DNA in a nanopore with optical tweezers Methods in Molecular Biology (Clifton, N.J.). 544: 95-112. PMID 19488696 DOI: 10.1007/978-1-59745-483-4_8  0.338
2009 van Loenhout MT, van der Heijden T, Kanaar R, Wyman C, Dekker C. Dynamics of RecA filaments on single-stranded DNA. Nucleic Acids Research. 37: 4089-99. PMID 19429893 DOI: 10.1093/Nar/Gkp326  0.421
2009 Wu MY, Smeets RM, Zandbergen M, Ziese U, Krapf D, Batson PE, Dekker NH, Dekker C, Zandbergen HW. Control of shape and material composition of solid-state nanopores. Nano Letters. 9: 479-84. PMID 19143508 DOI: 10.1021/Nl803613S  0.579
2009 Heller I, Männik J, Lemay SG, Dekker C. Optimizing the signal-to-noise ratio for biosensing with carbon nanotube transistors. Nano Letters. 9: 377-82. PMID 19072626 DOI: 10.1021/Nl8031636  0.558
2009 Smeets RM, Kowalczyk SW, Hall AR, Dekker NH, Dekker C. Translocation of RecA-coated double-stranded DNA through solid-state nanopores. Nano Letters. 9: 3089-96. PMID 19053490 DOI: 10.1021/Nl803189K  0.409
2009 Van Dorp S, Keyser UF, Dekker NH, Dekker C, Lemay SG. Origin of the electrophoretic force on DNA in solid-state nanopores Nature Physics. 5: 347-351. DOI: 10.1038/Nphys1230  0.631
2009 Kowalczyk SW, Smeets RM, Hall AR, Dekker NH, Dekker C. Static and Dynamic Investigations of RecA-DNA Complex with a Solid-State Nanopore Biophysical Journal. 96: 649a. DOI: 10.1016/J.Bpj.2008.12.3858  0.45
2009 van den Hout M, Skinner GM, Broekmans OD, Dekker C, Dekker NH. Salt Dependence Of RNA Translocations Through Solid State Nanopores Biophysical Journal. 96: 645a. DOI: 10.1016/J.Bpj.2008.12.3837  0.323
2009 Dekker C. Nanostructures For Studying The Physics Of Biomolecules And Cells Biophysical Journal. 96: 552a. DOI: 10.1016/J.Bpj.2008.12.2997  0.395
2009 Skinner GM, van den Hout M, Broekmans O, Dekker C, Dekker NH. Probing the Structural Properties of RNA using Solid-State Nanopores Biophysical Journal. 96: 544a. DOI: 10.1016/J.Bpj.2008.12.2946  0.4
2009 Heller I, Chatoor S, Männik J, Zevenbergen MAG, Dekker C, Lemay SG. Comparing the weak and strong gate-coupling regimes for nanotube and graphene transistors Physica Status Solidi - Rapid Research Letters. 3: 190-192. DOI: 10.1002/Pssr.200903157  0.56
2008 Hoeben FJ, Meijer FS, Dekker C, Albracht SP, Heering HA, Lemay SG. Toward single-enzyme molecule electrochemistry: [NiFe]-hydrogenase protein film voltammetry at nanoelectrodes. Acs Nano. 2: 2497-504. PMID 19206284 DOI: 10.1021/Nn800518D  0.574
2008 Sisáková E, Weiserová M, Dekker C, Seidel R, Szczelkun MD. The interrelationship of helicase and nuclease domains during DNA translocation by the molecular motor EcoR124I. Journal of Molecular Biology. 384: 1273-86. PMID 18952104 DOI: 10.1016/J.Jmb.2008.10.017  0.355
2008 Bonthuis DJ, Meyer C, Stein D, Dekker C. Conformation and dynamics of DNA confined in slitlike nanofluidic channels. Physical Review Letters. 101: 108303. PMID 18851263 DOI: 10.1103/Physrevlett.101.108303  0.556
2008 van den Hout M, Hage S, Dekker C, Dekker NH. End-joining long nucleic acid polymers Nucleic Acids Research. 36. PMID 18658247 DOI: 10.1093/Nar/Gkn442  0.342
2008 van der Heijden T, Dekker C. Monte carlo simulations of protein assembly, disassembly, and linear motion on DNA. Biophysical Journal. 95: 4560-9. PMID 18658217 DOI: 10.1529/Biophysj.108.135061  0.39
2008 van der Heijden T, Modesti M, Hage S, Kanaar R, Wyman C, Dekker C. Homologous recombination in real time: DNA strand exchange by RecA. Molecular Cell. 30: 530-8. PMID 18498754 DOI: 10.1016/J.Molcel.2008.03.010  0.419
2008 Hoeben FJ, Heller I, Albracht SP, Dekker C, Lemay SG, Heering HA. Polymyxin-coated Au and carbon nanotube electrodes for stable [NiFe]-hydrogenase film voltammetry. Langmuir : the Acs Journal of Surfaces and Colloids. 24: 5925-31. PMID 18459755 DOI: 10.1021/La703984Z  0.568
2008 Seidel R, Bloom JG, Dekker C, Szczelkun MD. Motor step size and ATP coupling efficiency of the dsDNA translocase EcoR124I. The Embo Journal. 27: 1388-98. PMID 18388857 DOI: 10.1038/Emboj.2008.69  0.323
2008 Männik J, Heller I, Janssens AM, Lemay SG, Dekker C. Charge noise in liquid-gated single-wall carbon nanotube transistors. Nano Letters. 8: 685-8. PMID 18217786 DOI: 10.1021/Nl073271H  0.565
2008 Heller I, Janssens AM, Männik J, Minot ED, Lemay SG, Dekker C. Identifying the mechanism of biosensing with carbon nanotube transistors. Nano Letters. 8: 591-5. PMID 18162002 DOI: 10.1021/Nl072996I  0.583
2008 Van Den Heuvel MGL, Bondesan R, Lagomarsino MC, Dekker C. Single-molecule observation of anomalous electrohydrodynamic orientation of microtubules Physical Review Letters. 101. DOI: 10.1103/Physrevlett.101.118301  0.303
2007 Dekker C. Solid-state nanopores. Nature Nanotechnology. 2: 209-15. PMID 18654264 DOI: 10.1038/Nnano.2007.27  0.355
2007 van der Heijden T, Seidel R, Modesti M, Kanaar R, Wyman C, Dekker C. Real-time assembly and disassembly of human RAD51 filaments on individual DNA molecules. Nucleic Acids Research. 35: 5646-57. PMID 17709342 DOI: 10.1093/Nar/Gkm629  0.416
2007 LeRoy BJ, Heller I, Pahilwani VK, Dekker C, Lemay SG. Simultaneous electrical transport and scanning tunneling spectroscopy of carbon nanotubes. Nano Letters. 7: 2937-41. PMID 17559287 DOI: 10.1021/Nl0708112  0.586
2007 Modesti M, Ristic D, van der Heijden T, Dekker C, van Mameren J, Peterman EJ, Wuite GJ, Kanaar R, Wyman C. Fluorescent human RAD51 reveals multiple nucleation sites and filament segments tightly associated along a single DNA molecule. Structure (London, England : 1993). 15: 599-609. PMID 17502105 DOI: 10.1016/J.Str.2007.04.003  0.422
2007 Van Den Heuvel MGL, De Graaff MP, Lemay SG, Dekker C. Electrophoresis of individual microtubules in microchannels Proceedings of the National Academy of Sciences of the United States of America. 104: 7770-7775. PMID 17470799 DOI: 10.1073/Pnas.0608316104  0.564
2007 van der Heyden FH, Bonthuis DJ, Stein D, Meyer C, Dekker C. Power generation by pressure-driven transport of ions in nanofluidic channels. Nano Letters. 7: 1022-5. PMID 17352506 DOI: 10.1021/Nl070194H  0.478
2007 Seidel R, Dekker C. Single-molecule studies of nucleic acid motors. Current Opinion in Structural Biology. 17: 80-6. PMID 17207989 DOI: 10.1016/J.Sbi.2006.12.003  0.305
2007 Minot ED, Janssens AM, Heller I, Heering HA, Dekker C, Lemay SG. Carbon nanotube biosensors: The critical role of the reference electrode Applied Physics Letters. 91. DOI: 10.1063/1.2775090  0.572
2007 Van Der Heijden T, Moreno-Herrero F, Kanaar R, Wyman C, Dekker C. AFM tip-induced dissociation of RecA-dsDNA filaments Nano Letters. 7: 1112. DOI: 10.1021/Nl070385K  0.36
2006 Wiggins PA, van der Heijden T, Moreno-Herrero F, Spakowitz A, Phillips R, Widom J, Dekker C, Nelson PC. High flexibility of DNA on short length scales probed by atomic force microscopy. Nature Nanotechnology. 1: 137-41. PMID 18654166 DOI: 10.1038/Nnano.2006.63  0.402
2006 van der Heijden T, Moreno-Herrero F, Kanaar R, Wyman C, Dekker C. Comment on "Direct and real-time visualization of the disassembly of a single RecA-DNA-ATPgammaS complex using AFM imaging in fluid". Nano Letters. 6: 3000-2. PMID 17163748 DOI: 10.1021/Nl061746J  0.367
2006 Krapf D, Quinn BM, Wu MY, Zandbergen HW, Dekker C, Lemay SG. Experimental observation of nonlinear ionic transport at the nanometer scale. Nano Letters. 6: 2531-5. PMID 17090086 DOI: 10.1021/Nl0619453  0.693
2006 Stein D, van der Heyden FH, Koopmans WJ, Dekker C. Pressure-driven transport of confined DNA polymers in fluidic channels. Proceedings of the National Academy of Sciences of the United States of America. 103: 15853-8. PMID 17047033 DOI: 10.1073/Pnas.0605900103  0.558
2006 van der Heyden FH, Bonthuis DJ, Stein D, Meyer C, Dekker C. Electrokinetic energy conversion efficiency in nanofluidic channels. Nano Letters. 6: 2232-7. PMID 17034089 DOI: 10.1021/Nl061524L  0.469
2006 van der Heyden FH, Stein D, Besteman K, Lemay SG, Dekker C. Charge inversion at high ionic strength studied by streaming currents. Physical Review Letters. 96: 224502. PMID 16803311 DOI: 10.1103/Physrevlett.96.224502  0.631
2006 Heller I, Kong J, Williams KA, Dekker C, Lemay SG. Electrochemistry at single-walled carbon nanotubes: the role of band structure and quantum capacitance. Journal of the American Chemical Society. 128: 7353-9. PMID 16734491 DOI: 10.1021/Ja061212K  0.581
2006 Stanley LK, Seidel R, van der Scheer C, Dekker NH, Szczelkun MD, Dekker C. When a helicase is not a helicase: dsDNA tracking by the motor protein EcoR124I. The Embo Journal. 25: 2230-9. PMID 16642041 DOI: 10.1038/Sj.Emboj.7601104  0.378
2006 Krapf D, Wu MY, Smeets RM, Zandbergen HW, Dekker C, Lemay SG. Fabrication and characterization of nanopore-based electrodes with radii down to 2 nm. Nano Letters. 6: 105-9. PMID 16402796 DOI: 10.1021/Nl052163X  0.705
2006 Smeets RM, Keyser UF, Krapf D, Wu MY, Dekker NH, Dekker C. Salt dependence of ion transport and DNA translocation through solid-state nanopores. Nano Letters. 6: 89-95. PMID 16402793 DOI: 10.1021/Nl052107W  0.628
2006 Keyser UF, Van Der Does J, Dekker C, Dekker NH. Optical tweezers for force measurements on DNA in nanopores Review of Scientific Instruments. 77. DOI: 10.1063/1.2358705  0.397
2006 Keyser UF, Koeleman BN, Van Dorp S, Krapf D, Smeets RMM, Lemay SG, Dekker NH, Dekker C. Direct force measurements on DNA in a solid-state nanopore Nature Physics. 2: 473-477. DOI: 10.1038/Nphys344  0.751
2005 Seidel R, Bloom JG, van Noort J, Dutta CF, Dekker NH, Firman K, Szczelkun MD, Dekker C. Dynamics of initiation, termination and reinitiation of DNA translocation by the motor protein EcoR124I. The Embo Journal. 24: 4188-97. PMID 16292342 DOI: 10.1038/Sj.Emboj.7600881  0.349
2005 Keyser UF, Krapf D, Koeleman BN, Smeets RM, Dekker NH, Dekker C. Nanopore tomography of a laser focus. Nano Letters. 5: 2253-6. PMID 16277463 DOI: 10.1021/Nl051597P  0.566
2005 Moreno-Herrero F, Holtzer L, Koster DA, Shuman S, Dekker C, Dekker NH. Atomic force microscopy shows that vaccinia topoisomerase IB generates filaments on DNA in a cooperative fashion Nucleic Acids Research. 33: 5945-5953. PMID 16237128 DOI: 10.1093/Nar/Gki906  0.421
2005 van der Heyden FH, Stein D, Dekker C. Streaming currents in a single nanofluidic channel. Physical Review Letters. 95: 116104. PMID 16197024 DOI: 10.1103/Physrevlett.95.116104  0.487
2005 Storm AJ, Storm C, Chen J, Zandbergen H, Joanny JF, Dekker C. Fast DNA translocation through a solid-state nanopore. Nano Letters. 5: 1193-7. PMID 16178209 DOI: 10.1021/Nl048030D  0.401
2005 Moreno-Herrero F, de Jager M, Dekker NH, Kanaar R, Wyman C, Dekker C. Mesoscale conformational changes in the DNA-repair complex Rad50/Mre11/Nbs1 upon binding DNA. Nature. 437: 440-3. PMID 16163361 DOI: 10.1038/Nature03927  0.383
2005 Storm AJ, Chen JH, Zandbergen HW, Dekker C. Translocation of double-strand DNA through a silicon oxide nanopore. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 71: 051903. PMID 16089567 DOI: 10.1103/Physreve.71.051903  0.416
2005 Ristic D, Modesti M, van der Heijden T, van Noort J, Dekker C, Kanaar R, Wyman C. Human Rad51 filaments on double- and single-stranded DNA: correlating regular and irregular forms with recombination function. Nucleic Acids Research. 33: 3292-302. PMID 15944450 DOI: 10.1093/Nar/Gki640  0.425
2005 Quinn BM, Dekker C, Lemay SG. Electrodeposition of noble metal nanoparticles on carbon nanotubes. Journal of the American Chemical Society. 127: 6146-7. PMID 15853300 DOI: 10.1021/Ja0508828  0.546
2005 van der Heijden T, van Noort J, van Leest H, Kanaar R, Wyman C, Dekker NH, Dekker N, Dekker C. Torque-limited RecA polymerization on dsDNA. Nucleic Acids Research. 33: 2099-105. PMID 15824062 DOI: 10.1093/Nar/Gki512  0.412
2005 Koster DA, Croquette V, Dekker C, Shuman S, Dekker NH. Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB. Nature. 434: 671-4. PMID 15800630 DOI: 10.1038/Nature03395  0.407
2005 van den Heuvel MG, Butcher CT, Lemay SG, Diez S, Dekker C. Electrical docking of microtubules for kinesin-driven motility in nanostructures. Nano Letters. 5: 235-41. PMID 15794603 DOI: 10.1021/Nl048291N  0.561
2005 Heller I, Kong J, Heering HA, Williams KA, Lemay SG, Dekker C. Individual single-walled carbon nanotubes as nanoelectrodes for electrochemistry. Nano Letters. 5: 137-42. PMID 15792427 DOI: 10.1021/Nl048200M  0.579
2005 Lemay SG, van den Broek DM, Storm AJ, Krapf D, Smeets RM, Heering HA, Dekker C. Lithographically fabricated nanopore-based electrodes for electrochemistry. Analytical Chemistry. 77: 1911-5. PMID 15762604 DOI: 10.1021/Ac0489972  0.688
2005 Abels JA, Moreno-Herrero F, Van Der Heijden T, Dekker C, Dekker NH. Single-molecule measurements of the persistence length of double-stranded RNA Biophysical Journal. 88: 2737-2744. PMID 15653727 DOI: 10.1529/Biophysj.104.052811  0.336
2005 LeRoy BJ, Kong J, Pahilwani VK, Dekker C, Lemay SG. Three-terminal scanning tunneling spectroscopy of suspended carbon nanotubes Physical Review B - Condensed Matter and Materials Physics. 72. DOI: 10.1103/Physrevb.72.075413  0.579
2005 Kong J, LeRoy BJ, Lemay SG, Dekker C. Integration of a gate electrode into carbon nanotube devices for scanning tunneling microscopy Applied Physics Letters. 86: 1-3. DOI: 10.1063/1.1883301  0.583
2004 van Noort J, van der Heijden T, Dutta CF, Firman K, Dekker C. Initiation of translocation by Type I restriction-modification enzymes is associated with a short DNA extrusion. Nucleic Acids Research. 32: 6540-7. PMID 15598825 DOI: 10.1093/Nar/Gkh999  0.365
2004 Leroy BJ, Lemay SG, Kong J, Dekker C. Electrical generation and absorption of phonons in carbon nanotubes. Nature. 432: 371-4. PMID 15549099 DOI: 10.1038/Nature03046  0.575
2004 Stein D, Kruithof M, Dekker C. Surface-charge-governed ion transport in nanofluidic channels. Physical Review Letters. 93: 035901. PMID 15323836 DOI: 10.1103/Physrevlett.93.035901  0.476
2004 Seidel R, van Noort J, van der Scheer C, Bloom JG, Dekker NH, Dutta CF, Blundell A, Robinson T, Firman K, Dekker C. Real-time observation of DNA translocation by the type I restriction modification enzyme EcoR124I. Nature Structural & Molecular Biology. 11: 838-43. PMID 15300241 DOI: 10.1038/Nsmb816  0.405
2004 van Noort J, Verbrugge S, Goosen N, Dekker C, Dame RT. Dual architectural roles of HU: formation of flexible hinges and rigid filaments. Proceedings of the National Academy of Sciences of the United States of America. 101: 6969-74. PMID 15118104 DOI: 10.1073/Pnas.0308230101  0.415
2004 LeRoy BJ, Lemay SG, Kong J, Dekker C. Erratum: “Scanning tunneling spectroscopy of suspended single-wall carbon nanotubes” [Appl. Phys. Lett. 84, 4280 (2004)] Applied Physics Letters. 85: 4246-4246. DOI: 10.1063/1.1808489  0.516
2004 LeRoy BJ, Lemay SG, Kong J, Dekker C. Scanning tunneling spectroscopy of suspended single-wall carbon nanotubes Applied Physics Letters. 84: 4280-4282. DOI: 10.1063/1.1748836  0.581
2003 Storm AJ, Chen JH, Ling XS, Zandbergen HW, Dekker C. Fabrication of solid-state nanopores with single-nanometre precision Nature Materials. 2: 537-540. PMID 12858166 DOI: 10.1038/Nmat941  0.3
2003 van Noort J, van Der Heijden T, de Jager M, Wyman C, Kanaar R, Dekker C. The coiled-coil of the human Rad50 DNA repair protein contains specific segments of increased flexibility. Proceedings of the National Academy of Sciences of the United States of America. 100: 7581-6. PMID 12805565 DOI: 10.1073/Pnas.1330706100  0.371
2003 Maltezopoulos T, Kubetzka A, Morgenstern M, Wiesendanger R, Lemay SG, Dekker C. Direct observation of confined states in metallic single-walled carbon nanotubes Applied Physics Letters. 83: 1011-1013. DOI: 10.1063/1.1598282  0.578
2002 Williams KA, Veenhuizen PT, de la Torre BG, Eritja R, Dekker C. Nanotechnology: carbon nanotubes with DNA recognition. Nature. 420: 761. PMID 12490938 DOI: 10.1038/420761A  0.397
2002 Thorwart M, Grifoni M, Cuniberti G, Postma HW, Dekker C. Correlated tunneling in intramolecular carbon nanotube quantum dots. Physical Review Letters. 89: 196402. PMID 12443136 DOI: 10.1103/Physrevlett.89.196402  0.742
2002 Cuniberti G, Craco L, Porath D, Dekker C. Backbone-induced semiconducting behavior in shortDNAwires Physical Review B. 65. DOI: 10.1103/Physrevb.65.241314  0.37
2002 Janssen JW, Lemay SG, Kouwenhoven LP, Dekker C. Scanning tunneling spectroscopy on crossed carbon nanotubes Physical Review B. 65. DOI: 10.1103/Physrevb.65.115423  0.588
2002 Williams KA, Veenhuizen PTM, Torre BGdl, Eritja R, Dekker C. Towards DNA‐Mediated Self Assembly of Carbon Nanotube Molecular Devices Structural and Electronic Properties of Molecular Nanostructures. Xvi International Winterschool On Electronic Properties of Novel Materials. 633: 444-448. DOI: 10.1063/1.1514159  0.366
2001 De Jager M, Van Noort J, Van Gent DC, Dekker C, Kanaar R, Wyman C. Human Rad50/Mre11 is a flexible complex that can tether DNA ends Molecular Cell. 8: 1129-1135. PMID 11741547 DOI: 10.1016/S1097-2765(01)00381-1  0.36
2001 Lemay SG, Janssen JW, van den Hout M, Mooij M, Bronikowski MJ, Willis PA, Smalley RE, Kouwenhoven LP, Dekker C. Two-dimensional imaging of electronic wavefunctions in carbon nanotubes. Nature. 412: 617-20. PMID 11493914 DOI: 10.1038/35088013  0.546
2001 Postma HW, Teepen T, Yao Z, Grifoni M, Dekker C. Carbon nanotube single-electron transistors at room temperature. Science (New York, N.Y.). 293: 76-9. PMID 11441175 DOI: 10.1126/Science.1061797  0.763
2001 Dekker C, Ratner M. Electronic properties of DNA Physics World. 14: 29-33. DOI: 10.1088/2058-7058/14/8/33  0.402
2001 Storm AJ, Van Noort J, De Vries S, Dekker C. Insulating behavior for DNA molecules between nanoelectrodes at the 100 nm length scale Applied Physics Letters. 79: 3881-3883. DOI: 10.1063/1.1421086  0.426
2000 Porath D, Bezryadin A, de Vries S, Dekker C. Direct measurement of electrical transport through DNA molecules. Nature. 403: 635-8. PMID 10688194 DOI: 10.1038/35001029  0.694
2000 Postma HWC, De Jonge M, Yao Z, Dekker C. Electrical transport through carbon nanotube junctions created by mechanical manipulation Physical Review B - Condensed Matter and Materials Physics. 62: R10653-R10656. DOI: 10.1103/Physrevb.62.R10653  0.321
2000 Venema LC, Janssen JW, Buitelaar MR, Wildöer JWG, Lemay SG, Kouwenhoven LP, Dekker C. Spatially resolved scanning tunneling spectroscopy on single-walled carbon nanotubes Physical Review B. 62: 5238-5244. DOI: 10.1103/Physrevb.62.5238  0.584
1999 Zhen Y, Postma HWC, Balents L, Dekker C. Carbon nanotube intramolecular junctions Nature. 402: 273-276. DOI: 10.1038/46241  0.324
1998 Bezryadin A, Verschueren ARM, Tans SJ, Dekker C. Multiprobe Transport Experiments on Individual Single-Wall Carbon Nanotubes Physical Review Letters. 80: 4036-4039. DOI: 10.1103/Physrevlett.80.4036  0.653
1998 Wildöer JWG, Venema LC, Rinzler AG, Smalley RE, Dekker C. Electronic structure of atomically resolved carbon nanotubes Nature. 391: 59-62. DOI: 10.1038/34139  0.314
1998 Tans SJ, Verschueren ARM, Dekker C. Room-temperature transistor based on a single carbon nanotube Nature. 393: 49-52. DOI: 10.1038/29954  0.333
1998 Tans SJ, Devoret MH, Groeneveld RJA, Dekker C. Electron-electron correlations in carbon manotubes Nature. 394: 761-764. DOI: 10.1038/29494  0.306
1997 Venema LC, Wildöer JWG, Temminck Tuinstra HLJ, Dekker C, Rinzler AG, Smalley RE. Length control of individual carbon nanotubes by nanostructuring with a scanning tunneling microscope Applied Physics Letters. 71: 2629-2631. DOI: 10.1063/1.120161  0.311
1997 Bezryadin A, Dekker C, Schmid G. Electrostatic trapping of single conducting nanoparticles between nanoelectrodes Applied Physics Letters. 71: 1273-1275. DOI: 10.1063/1.119871  0.628
1997 Tans SJ, Devoret MH, Dai H, Thess A, Smalley RE, Geerligs LJ, Dekker C. Individual single-wall carbon nanotubes as quantum wires Nature. 386: 474-477. DOI: 10.1038/386474A0  0.318
1997 Dekker C, Tans S, Oberndorff B, Meyer R, Venema L. STM imaging and spectroscopy of single copperphthalocyanine molecules Synthetic Metals. 84: 853-854. DOI: 10.1016/S0379-6779(96)04179-3  0.304
1997 Tans S, Miedema R, Geerligs L, Dekker C, Wu J, Wegner G. Electrical transport in monolayers of phthalocyanine molecular wires and afm imaging of a single wire bridging two electrodes Synthetic Metals. 84: 733-734. DOI: 10.1016/S0379-6779(96)04121-5  0.308
1995 Wöltgens PJM, Dekker C, Gielkens SWA, de Wijn HW. Voltage noise of YBa2Cu3O7-δ films in the vortex-liquid phase Physica C: Superconductivity and Its Applications. 247: 67-73. DOI: 10.1016/0921-4534(95)00195-6  0.633
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