| Year |
Citation |
Score |
| 2023 |
Ramesh B, Small CM, Healey H, Johnson B, Barker E, Currey M, Bassham S, Myers M, Cresko WA, Jones AG. Improvements to the Gulf pipefish genome. Gigabyte (Hong Kong, China). 2023: gigabyte76. PMID 36969711 DOI: 10.46471/gigabyte.76 |
0.314 |
|
| 2023 |
Currey MC, Walker C, Bassham S, Healey HM, Beck EA, Cresko WA. Genome-wide analysis facilitates estimation of the amount of male contribution in meiotic gynogenetic threespine stickleback (Gasterosteus aculeatus). Journal of Fish Biology. PMID 36647901 DOI: 10.1111/jfb.15321 |
0.317 |
|
| 2022 |
Small CM, Healey HM, Currey MC, Beck EA, Catchen J, Lin ASP, Cresko WA, Bassham S. Leafy and weedy seadragon genomes connect genic and repetitive DNA features to the extravagant biology of syngnathid fishes. Proceedings of the National Academy of Sciences of the United States of America. 119: e2119602119. PMID 35733255 DOI: 10.1073/pnas.2119602119 |
0.416 |
|
| 2022 |
Healey HM, Bassham S, Cresko WA. Single cell Iso-Sequencing enables rapid genome annotation for scRNAseq analysis. Genetics. PMID 35143654 DOI: 10.1093/genetics/iyac017 |
0.361 |
|
| 2021 |
Rengefors K, Gollnisch R, Sassenhagen I, Härnström Aloisi K, Svensson M, Lebret K, Čertnerová D, Cresko WA, Bassham S, Ahrén D. Genome-wide single nucleotide polymorphism markers reveal population structure and dispersal direction of an expanding nuisance algal bloom species. Molecular Ecology. PMID 33386639 DOI: 10.1111/mec.15787 |
0.314 |
|
| 2020 |
Catchen J, Amores A, Bassham S. Chromonomer: A Tool Set for Repairing and Enhancing Assembled Genomes Through Integration of Genetic Maps and Conserved Synteny. G3: Genes, Genomes, Genetics. PMID 32912931 DOI: 10.1534/G3.120.401485 |
0.404 |
|
| 2019 |
Currey MC, Bassham SL, Cresko WA. Genetic divergence outpaces phenotypic evolution among threespine stickleback populations in old freshwater habitats Biological Journal of the Linnean Society. 128: 415-434. DOI: 10.1093/Biolinnean/Blz106 |
0.329 |
|
| 2018 |
Bassham S, Catchen J, Lescak E, von Hippel FA, Cresko WA. Repeated Selection of Alternatively Adapted Haplotypes Creates Sweeping Genomic Remodeling in Stickleback. Genetics. PMID 29794240 DOI: 10.1534/Genetics.117.300610 |
0.453 |
|
| 2017 |
Currey MC, Bassham S, Perry S, Cresko WA. Developmental timing differences underlie armor loss across threespine stickleback populations. Evolution & Development. 19: 231-243. PMID 29115024 DOI: 10.1111/Ede.12242 |
0.396 |
|
| 2017 |
Small CM, Milligan-Myhre K, Bassham S, Guillemin K, Cresko WA. Host Genotype and Microbiota Contribute Asymmetrically to Transcriptional Variation in the Threespine Stickleback Gut. Genome Biology and Evolution. 9: 504-520. PMID 28391321 DOI: 10.1093/Gbe/Evx014 |
0.348 |
|
| 2017 |
Lescak EA, Wund MA, Bassham S, Catchen J, Prince DJ, Lucas R, Dominguez G, von Hippel FA, Cresko WA. Ancient three-spined stickleback (Gasterosteus aculeatus) mtDNA lineages are not associated with phenotypic or nuclear genetic variation Biological Journal of the Linnean Society. 122: 579-588. DOI: 10.1093/Biolinnean/Blx080 |
0.306 |
|
| 2016 |
Small CM, Bassham S, Catchen J, Amores A, Fuiten AM, Brown RS, Jones AG, Cresko WA. The genome of the Gulf pipefish enables understanding of evolutionary innovations. Genome Biology. 17: 258. PMID 27993155 DOI: 10.1186/S13059-016-1126-6 |
0.506 |
|
| 2015 |
Lescak EA, Bassham SL, Catchen J, Gelmond O, Sherbick ML, von Hippel FA, Cresko WA. Evolution of stickleback in 50 years on earthquake-uplifted islands. Proceedings of the National Academy of Sciences of the United States of America. PMID 26668399 DOI: 10.1073/Pnas.1512020112 |
0.396 |
|
| 2015 |
Allendorf FW, Bassham S, Cresko WA, Limborg MT, Seeb LW, Seeb JE. Effects of crossovers between homeologs on inheritance and population genomics in polyploid-derived salmonid fishes Journal of Heredity. 106: 217-227. PMID 25838153 DOI: 10.1093/Jhered/Esv015 |
0.407 |
|
| 2015 |
Galvao RP, Bassham S, Nelson TC, Sydes J, Rosenfeld LK, Cresko WA, Zong H. Abstract B01: Molecular evolutionary process of malignant glioma Brain. 75. DOI: 10.1158/1538-7445.Brain15-B01 |
0.389 |
|
| 2013 |
Catchen J, Bassham S, Wilson T, Currey M, O'Brien C, Yeates Q, Cresko WA. The population structure and recent colonization history of Oregon threespine stickleback determined using restriction-site associated DNA-sequencing. Molecular Ecology. 22: 2864-83. PMID 23718143 DOI: 10.1111/Mec.12330 |
0.408 |
|
| 2013 |
Catchen J, Hohenlohe PA, Bassham S, Amores A, Cresko WA. Stacks: an analysis tool set for population genomics. Molecular Ecology. 22: 3124-40. PMID 23701397 DOI: 10.1111/Mec.12354 |
0.392 |
|
| 2012 |
Hohenlohe PA, Bassham S, Currey M, Cresko WA. Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 367: 395-408. PMID 22201169 DOI: 10.1098/Rstb.2011.0245 |
0.465 |
|
| 2011 |
Etter PD, Bassham S, Hohenlohe PA, Johnson EA, Cresko WA. SNP discovery and genotyping for evolutionary genetics using RAD sequencing. Methods in Molecular Biology (Clifton, N.J.). 772: 157-78. PMID 22065437 DOI: 10.1007/978-1-61779-228-1_9 |
0.414 |
|
| 2011 |
Etter PD, Preston JL, Bassham S, Cresko WA, Johnson EA. Local de novo assembly of RAD paired-end contigs using short sequencing reads. Plos One. 6: e18561. PMID 21541009 DOI: 10.1371/Journal.Pone.0018561 |
0.332 |
|
| 2010 |
Hohenlohe PA, Bassham S, Etter PD, Stiffler N, Johnson EA, Cresko WA. Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags. Plos Genetics. 6: e1000862. PMID 20195501 DOI: 10.1371/Journal.Pgen.1000862 |
0.455 |
|
| 2008 |
Bassham S, Cañestro C, Postlethwait JH. Evolution of developmental roles of Pax2/5/8 paralogs after independent duplication in urochordate and vertebrate lineages. Bmc Biology. 6: 35. PMID 18721460 DOI: 10.1186/1741-7007-6-35 |
0.674 |
|
| 2008 |
Cañestro C, Bassham S, Postlethwait JH. Evolution of the thyroid: anterior-posterior regionalization of the Oikopleura endostyle revealed by Otx, Pax2/5/8, and Hox1 expression. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 237: 1490-9. PMID 18386819 DOI: 10.1002/Dvdy.21525 |
0.663 |
|
| 2005 |
Bassham S, Postlethwait JH. The evolutionary history of placodes: a molecular genetic investigation of the larvacean urochordate Oikopleura dioica. Development (Cambridge, England). 132: 4259-72. PMID 16120641 DOI: 10.1242/Dev.01973 |
0.564 |
|
| 2005 |
Cañestro C, Bassham S, Postlethwait J. Development of the central nervous system in the larvacean Oikopleura dioica and the evolution of the chordate brain. Developmental Biology. 285: 298-315. PMID 16111672 DOI: 10.1016/J.Ydbio.2005.06.039 |
0.67 |
|
| 2003 |
Cañestro C, Bassham S, Postlethwait JH. Seeing chordate evolution through the Ciona genome sequence Genome Biology. 4. PMID 12620098 DOI: 10.1186/Gb-2003-4-3-208 |
0.652 |
|
| 2000 |
Bassham S, Postlethwait J. Brachyury (T) expression in embryos of a larvacean urochordate, Oikopleura dioica, and the ancestral role of T Developmental Biology. 220: 322-332. PMID 10753519 DOI: 10.1006/Dbio.2000.9647 |
0.513 |
|
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