| Year |
Citation |
Score |
| 2017 |
Petruska J, Goodman MF. Relating DNA base-pairing in aqueous media to DNA polymerase fidelity. Nature Reviews. Chemistry. 1. PMID 30271879 DOI: 10.1038/s41570-017-0074 |
0.602 |
|
| 2016 |
Oertell K, Harcourt EM, Mohsen MG, Petruska J, Kool ET, Goodman MF. Kinetic selection vs. free energy of DNA base pairing in control of polymerase fidelity. Proceedings of the National Academy of Sciences of the United States of America. PMID 27044101 DOI: 10.1073/Pnas.1600279113 |
0.577 |
|
| 2010 |
Bertram JG, Oertell K, Petruska J, Goodman MF. DNA polymerase fidelity: comparing direct competition of right and wrong dNTP substrates with steady state and pre-steady state kinetics. Biochemistry. 49: 20-8. PMID 20000359 DOI: 10.1021/Bi901653G |
0.476 |
|
| 2009 |
Chelico L, Pham P, Petruska J, Goodman MF. Biochemical basis of immunological and retroviral responses to DNA-targeted cytosine deamination by activation-induced cytidine deaminase and APOBEC3G. The Journal of Biological Chemistry. 284: 27761-5. PMID 19684020 DOI: 10.1074/Jbc.R109.052449 |
0.425 |
|
| 2003 |
Pham P, Bransteitter R, Petruska J, Goodman MF. Processive AID-catalysed cytosine deamination on single-stranded DNA simulates somatic hypermutation. Nature. 424: 103-7. PMID 12819663 DOI: 10.1038/Nature01760 |
0.589 |
|
| 2002 |
Hartenstine MJ, Goodman MF, Petruska J. Weak strand displacement activity enables human DNA polymerase beta to expand CAG/CTG triplet repeats at strand breaks. The Journal of Biological Chemistry. 277: 41379-89. PMID 12196536 DOI: 10.1074/Jbc.M207013200 |
0.719 |
|
| 2000 |
Hartenstine MJ, Goodman MF, Petruska J. Base stacking and even/odd behavior of hairpin loops in DNA triplet repeat slippage and expansion with DNA polymerase. The Journal of Biological Chemistry. 275: 18382-90. PMID 10849445 DOI: 10.1074/Jbc.275.24.18382 |
0.739 |
|
| 2000 |
Hartenstine MJ, Goodman MF, Petruska J. Base Stacking and Even/Odd Behavior of Hairpin Loops in DNA Triplet Repeat Sequences Undergoing Slippage and Expansion with DNA Polymerase Journal of Biological Chemistry. DOI: 10.1074/Jbc.M910272199 |
0.739 |
|
| 1998 |
Petruska J, Hartenstine MJ, Goodman MF. Analysis of strand slippage in DNA polymerase expansions of CAG/CTG triplet repeats associated with neurodegenerative disease. The Journal of Biological Chemistry. 273: 5204-10. PMID 9478975 DOI: 10.1074/Jbc.273.9.5204 |
0.728 |
|
| 1996 |
Petruska J, Arnheim N, Goodman MF. Stability of intrastrand hairpin structures formed by the CAG/CTG class of DNA triplet repeats associated with neurological diseases Nucleic Acids Research. 24: 1992-1998. PMID 8668527 DOI: 10.1093/Nar/24.11.1992 |
0.689 |
|
| 1995 |
Petruska J, Goodman MF. Enthalpy-entropy compensation in DNA melting thermodynamics Journal of Biological Chemistry. 270: 746-750. PMID 7822305 DOI: 10.1074/Jbc.270.2.746 |
0.486 |
|
| 1995 |
Fothergill M, Goodman MF, Petruska J, Warshel A. Structure-energy analysis of the role of metal ions in phosphodiester bond hydrolysis by DNA polymerase I Journal of the American Chemical Society. 117: 11619-11627. DOI: 10.1021/Ja00152A001 |
0.41 |
|
| 1995 |
Fothergill M, Goodman MF, Petruska J, Warshel A. Structure-energy analysis of the role of metal ions in phosphodiester bond hydrolysis by DNA polymerase I Journal of the American Chemical Society. 117: X-11623. |
0.335 |
|
| 1993 |
Goodman MF, Creighton S, Bloom LB, Petruska J, Kunkel TA. Biochemical basis of DNA replication fidelity Critical Reviews in Biochemistry and Molecular Biology. 28: 83-126. PMID 8485987 DOI: 10.3109/10409239309086792 |
0.659 |
|
| 1989 |
Mendelman LV, Boosalis MS, Petruska J, Goodman MF. Nearest neighbor influences on DNA polymerase insertion fidelity Journal of Biological Chemistry. 264: 14415-14423. PMID 2474545 |
0.318 |
|
| 1988 |
Petruska J, Goodman MF, Boosalis MS, Sowers LC, Cheong C, Tinoco I. Comparison between DNA melting thermodynamics and DNA polymerase fidelity Proceedings of the National Academy of Sciences of the United States of America. 85: 6252-6256. PMID 3413095 DOI: 10.1073/Pnas.85.17.6252 |
0.638 |
|
| 1987 |
Boosalis MS, Petruska J, Goodman MF. DNA polymerase insertion fidelity. Gel assay for site-specific kinetics Journal of Biological Chemistry. 262: 14689-14696. PMID 3667598 |
0.306 |
|
| 1987 |
Randall SK, Eritja R, Kaplan BE, Petruska J, Goodman MF. Nucleotide insertion kinetics opposite abasic lesions in DNA. The Journal of Biological Chemistry. 262: 6864-70. PMID 3571289 |
0.449 |
|
| 1986 |
Eritja R, Kaplan BE, Mhaskar D, Sowers LC, Petruska J, Goodman MF. Synthesis and properties of defined DNA oligomers containing base mispairs involving 2-aminopurine. Nucleic Acids Research. 14: 5869-84. PMID 3737416 DOI: 10.1093/Nar/14.14.5869 |
0.481 |
|
| 1986 |
Petruska J, Sowers LC, Goodman MF. Comparison of nucleotide interactions in water, proteins, and vacuum: Model for DNA polymerase fidelity Proceedings of the National Academy of Sciences of the United States of America. 83: 1559-1562. PMID 3456600 DOI: 10.1073/Pnas.83.6.1559 |
0.433 |
|
| 1985 |
Petruska J, Goodman MF. Influence of neighboring bases on DNA polymerase insertion and proofreading fidelity Journal of Biological Chemistry. 260: 7533-7539. PMID 3158658 |
0.52 |
|
| 1985 |
Petruska J, Goodman MF. Sequence dependence of DNA polymerase insertion and proof-reading fidelity Federation Proceedings. 44: No. 2611. |
0.558 |
|
| 1983 |
Petruska J, Horn D. Sequence-specific responses of restriction endonucleases to bromodeoxyuridine substitution in mammalian DNA Nucleic Acids Research. 11: 2495-2510. PMID 6304654 DOI: 10.1093/Nar/11.8.2495 |
0.544 |
|
| 1980 |
Petruska J, Horn D. Bromodeoxyuridine substitution in mammalian DNA can both stimulate and inhibit restriction cleavage Biochemical and Biophysical Research Communications. 96: 1317-1324. PMID 6254530 DOI: 10.1016/0006-291X(80)90095-9 |
0.584 |
|
| Show low-probability matches. |