Covadonga R. Arias - Publications

Affiliations: 
Auburn University, Auburn, AL, United States 
Area:
Microbiology Biology, Fisheries and Aquaculture Agriculture

55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 LaFrentz S, Abarca E, Mohammed HH, Cuming R, Arias CR. Characterization of the normal equine conjunctival bacterial community using culture-independent methods. Veterinary Ophthalmology. PMID 32017364 DOI: 10.1111/Vop.12743  0.355
2019 Cai W, De La Fuente L, Arias CR. Transcriptome analysis of the fish pathogen Flavobacterium columnare in biofilm suggests calcium role in pathogenesis. Bmc Microbiology. 19: 151. PMID 31272369 DOI: 10.1186/S12866-019-1533-4  0.306
2019 Declercq AM, Cai W, Naranjo E, Thongda W, Eeckhaut V, Bauwens E, Arias C, De La Fuente L, Beck BH, Lange MD, Peatman E, Haesebrouck F, Aerts J, Decostere A. Evidence that the stress hormone cortisol regulates biofilm formation differently among Flavobacterium columnare isolates. Veterinary Research. 50: 24. PMID 30971289 DOI: 10.1186/S13567-019-0641-3  0.36
2019 Grodeska SM, Jones JL, Walton WC, Arias CR. Effects of desiccation practices and ploidy in cultured oysters, Crassostrea virginica, on Vibrio spp. abundances in Portersville Bay (Alabama, USA) Aquaculture. 507: 164-171. DOI: 10.1016/J.Aquaculture.2019.03.060  0.324
2018 Burgos FA, Ray CL, Arias CR. Bacterial diversity and community structure of the intestinal microbiome of Channel Catfish (Ictalurus punctatus) during ontogenesis. Systematic and Applied Microbiology. PMID 29803608 DOI: 10.1016/J.Syapm.2018.04.006  0.36
2017 Cai W, Arias CR. Biofilm Formation on Aquaculture Substrates by Selected Bacterial Fish Pathogens. Journal of Aquatic Animal Health. 29: 95-104. PMID 28406736 DOI: 10.1080/08997659.2017.1290711  0.309
2017 Tarnecki AM, Burgos FA, Ray CL, Arias CR. Fish Intestinal Microbiome: Diversity and Symbiosis Unraveled by Metagenomics. Journal of Applied Microbiology. PMID 28176435 DOI: 10.1111/Jam.13415  0.373
2016 Tarnecki AM, Patterson WF, Arias CR. Microbiota of wild-caught Red Snapper Lutjanus campechanus. Bmc Microbiology. 16: 245. PMID 27769187 DOI: 10.1186/S12866-016-0864-7  0.37
2016 Evenhuis JP, Mohammed H, LaPatra SE, Welch TJ, Arias CR. Virulence and molecular variation of Flavobacterium columnare affecting rainbow trout in Idaho, USA Aquaculture. 464: 106-110. DOI: 10.1016/J.Aquaculture.2016.06.017  0.335
2015 Mohammed HH, Arias CR. Potassium permanganate elicits a shift of the external fish microbiome and increases host susceptibility to columnaris disease. Veterinary Research. 46: 82. PMID 26170019 DOI: 10.1186/S13567-015-0215-Y  0.38
2015 Larsen AM, Mohammed HH, Arias CR. Comparison of DNA extraction protocols for the analysis of gut microbiota in fishes. Fems Microbiology Letters. 362. PMID 25757730 DOI: 10.1093/Femsle/Fnu031  0.348
2015 Larsen AM, Bullard SA, Womble M, Arias CR. Community Structure of Skin Microbiome of Gulf Killifish, Fundulus grandis, Is Driven by Seasonality and Not Exposure to Oiled Sediments in a Louisiana Salt Marsh. Microbial Ecology. 70: 534-44. PMID 25704317 DOI: 10.1007/S00248-015-0578-7  0.336
2015 Larsen AM, Rikard FS, Walton WC, Arias CR. Temperature effect on high salinity depuration of Vibrio vulnificus and V. parahaemolyticus from the Eastern oyster (Crassostrea virginica). International Journal of Food Microbiology. 192: 66-71. PMID 25310264 DOI: 10.1016/J.Ijfoodmicro.2014.09.025  0.345
2014 Mohammed HH, Arias CR. Epidemiology of columnaris disease affecting fishes within the same watershed. Diseases of Aquatic Organisms. 109: 201-11. PMID 24991846 DOI: 10.3354/Dao02739  0.379
2014 Larsen AM, Mohammed HH, Arias CR. Characterization of the gut microbiota of three commercially valuable warmwater fish species. Journal of Applied Microbiology. 116: 1396-404. PMID 24529218 DOI: 10.1111/Jam.12475  0.356
2013 Arias CR, Koenders K, Larsen AM. Predominant bacteria associated with red snapper from the Northern Gulf of Mexico. Journal of Aquatic Animal Health. 25: 281-9. PMID 24341770 DOI: 10.1080/08997659.2013.847872  0.424
2013 Cai W, De La Fuente L, Arias CR. Biofilm formation by the fish pathogen Flavobacterium columnare: development and parameters affecting surface attachment. Applied and Environmental Microbiology. 79: 5633-42. PMID 23851087 DOI: 10.1128/Aem.01192-13  0.332
2013 Larsen A, Tao Z, Bullard SA, Arias CR. Diversity of the skin microbiota of fishes: evidence for host species specificity. Fems Microbiology Ecology. 85: 483-94. PMID 23607777 DOI: 10.1111/1574-6941.12136  0.361
2013 Wood RR, Arias CR. Dynamics of Bacterial Communities in Postharvested Eastern Oyster (Crassostrea virginica) Maintained Under Refrigeration Journal of Aquatic Food Product Technology. 24: 300-312. DOI: 10.1080/10498850.2013.772270  0.694
2012 Arias CR, Lafrentz S, Cai W, Olivares-Fuster O. Adaptive response to starvation in the fish pathogen Flavobacterium columnare: cell viability and ultrastructural changes. Bmc Microbiology. 12: 266. PMID 23163917 DOI: 10.1186/1471-2180-12-266  0.323
2012 Tao Z, Larsen AM, Bullard SA, Wright AC, Arias CR. Prevalence and population structure of Vibrio vulnificus on fishes from the northern Gulf of Mexico. Applied and Environmental Microbiology. 78: 7611-8. PMID 22923394 DOI: 10.1128/Aem.01646-12  0.409
2012 Wood RR, Arias CR. Distribution and survival of Vibrio vulnificus genotypes in postharvest Gulf Coast (USA) oysters under refrigeration. Journal of Applied Microbiology. 113: 172-80. PMID 22507030 DOI: 10.1111/J.1365-2672.2012.05306.X  0.671
2011 Olivares-Fuster O, Bullard SA, McElwain A, Llosa MJ, Arias CR. Adhesion dynamics of Flavobacterium columnare to channel catfish Ictalurus punctatus and zebrafish Danio rerio after immersion challenge. Diseases of Aquatic Organisms. 96: 221-7. PMID 22132500 DOI: 10.3354/Dao02371  0.321
2011 Bullard SA, Olivares-Fuster O, Benz GW, Arias CR. Molecules infer origins of ectoparasite infrapopulations on tuna. Parasitology International. 60: 447-51. PMID 21840416 DOI: 10.1016/J.Parint.2011.07.016  0.319
2011 Zhou P, Hussain SK, Liles MR, Arias CR, Backert S, Kieninger J, Oyarzabal OA. A simplified and cost-effective enrichment protocol for the isolation of Campylobacter spp. from retail broiler meat without microaerobic incubation. Bmc Microbiology. 11: 175. PMID 21812946 DOI: 10.1186/1471-2180-11-175  0.336
2011 Sudini H, Liles MR, Arias CR, Bowen KL, Huettel RN. Exploring soil bacterial communities in different peanut-cropping sequences using multiple molecular approaches. Phytopathology. 101: 819-27. PMID 21281114 DOI: 10.1094/Phyto-11-10-0310  0.328
2011 Wood RR, Arias CR. Evaluation of global gene expression during cold shock in the human pathogen Vibrio vulnificus. Marine Biotechnology (New York, N.Y.). 13: 942-54. PMID 21246233 DOI: 10.1007/S10126-010-9356-1  0.68
2011 Bebak J, Shoemaker C, Arias C, Klesius P. Assay performance during validation of freezing channel catfish Ictalurus punctatus (Rafinesque) infected with a Gram-negative bacterium Aquaculture Research. 42: 169-176. DOI: 10.1111/J.1365-2109.2010.02551.X  0.34
2010 Arias CR, Olivares-Fuster O, Goris J. High intragenomic heterogeneity of 16S rRNA genes in a subset of Vibrio vulnificus strains from the western Mediterranean coast. International Microbiology : the Official Journal of the Spanish Society For Microbiology. 13: 179-88. PMID 21404212 DOI: 10.2436/20.1501.01.124  0.384
2010 Olivares-Fuster O, Terhune JS, Shoemaker CA, Arias CR. Cloning, expression, and immunogenicity of Flavobacterium columnare heat shock protein dnaJ. Journal of Aquatic Animal Health. 22: 78-86. PMID 20848881 DOI: 10.1577/H09-029.1  0.326
2010 Arias CR, Verdonck L, Swings J, Garay E, Aznar R. Intraspecific Differentiation of Vibrio vulnificus Biotypes by Amplified Fragment Length Polymorphism and Ribotyping. Applied and Environmental Microbiology. 63: 2600-6. PMID 16535640 DOI: 10.1128/Aem.63.7.2600-2606.1997  0.38
2009 Prapaiwong N, Wallace RK, Arias CR. Bacterial loads and microbial composition in high pressure treated oysters during storage. International Journal of Food Microbiology. 131: 145-50. PMID 19303653 DOI: 10.1016/J.Ijfoodmicro.2009.02.014  0.411
2009 Limthammahisorn S, Brady YJ, Arias CR. In vivo gene expression of cold shock and other stress-related genes in Vibrio vulnificus during shellstock temperature control conditions in oysters. Journal of Applied Microbiology. 106: 642-50. PMID 19200328 DOI: 10.1111/J.1365-2672.2008.04038.X  0.324
2008 Olivares-Fuster O, Arias CR. Use of suppressive subtractive hybridization to identify Flavobacterium columnare DNA sequences not shared with Flavobacterium johnsoniae. Letters in Applied Microbiology. 46: 605-12. PMID 18444979 DOI: 10.1111/J.1472-765X.2008.02366.X  0.325
2008 Limthammahisorn S, Brady YJ, Arias CR. Gene expression of cold shock and other stress-related genes in Vibrio vulnificus grown in pure culture under shellstock temperature control conditions. Journal of Food Protection. 71: 157-64. PMID 18236677 DOI: 10.4315/0362-028X-71.1.157  0.337
2008 Shoemaker CA, Olivares-Fuster O, Arias CR, Klesius PH. Flavobacterium columnare genomovar influences mortality in channel catfish (Ictalurus punctatus). Veterinary Microbiology. 127: 353-9. PMID 17964085 DOI: 10.1016/J.Vetmic.2007.09.003  0.306
2007 Olivares-Fuster O, Baker JL, Terhune JS, Shoemaker CA, Klesius PH, Arias CR. Host-specific association between Flavobacterium columnare genomovars and fish species. Systematic and Applied Microbiology. 30: 624-33. PMID 17706907 DOI: 10.1016/J.Syapm.2007.07.003  0.392
2007 Abernathy JW, Xu P, Li P, Xu DH, Kucuktas H, Klesius P, Arias C, Liu Z. Generation and analysis of expressed sequence tags from the ciliate protozoan parasite Ichthyophthirius multifiliis. Bmc Genomics. 8: 176. PMID 17577414 DOI: 10.1186/1471-2164-8-176  0.342
2007 Olivares-Fuster O, Shoemaker CA, Klesius PH, Arias CR. Molecular typing of isolates of the fish pathogen, Flavobacterium columnare, by single-strand conformation polymorphism analysis. Fems Microbiology Letters. 269: 63-9. PMID 17229061 DOI: 10.1111/J.1574-6968.2006.00605.X  0.387
2007 Zhang Y, Arias CR. Identification and characterization of an intervening sequence within the 23S ribosomal RNA genes of Edwardsiella ictaluri. Systematic and Applied Microbiology. 30: 93-101. PMID 16697134 DOI: 10.1016/J.Syapm.2006.04.004  0.613
2006 Zhang Y, Arias CR, Shoemaker CA, Klesius PH. Comparison of lipopolysaccharide and protein profiles between Flavobacterium columnare strains from different genomovars. Journal of Fish Diseases. 29: 657-63. PMID 17169112 DOI: 10.1111/J.1365-2761.2006.00760.X  0.529
2006 Arias CR, Abernathy JW, Liu Z. Combined use of 16S ribosomal DNA and automated ribosomal intergenic spacer analysis to study the bacterial community in catfish ponds. Letters in Applied Microbiology. 43: 287-92. PMID 16910933 DOI: 10.1111/J.1472-765X.2006.01955.X  0.336
2005 Guo W, Duan Y, Olivares-Fuster O, Wu Z, Arias CR, Burns JK, Grosser JW. Protoplast transformation and regeneration of transgenic Valencia sweet orange plants containing a juice quality-related pectin methylesterase gene. Plant Cell Reports. 24: 482-6. PMID 15875190 DOI: 10.1007/S00299-005-0952-X  0.322
2005 Welker TL, Shoemaker CA, Arias CR, Klesius PH. Transmission and detection of Flavobacterium columnare in channel catfish Ictalurus punctatus. Diseases of Aquatic Organisms. 63: 129-38. PMID 15819428 DOI: 10.3354/Dao063129  0.327
2005 Figueiredo HC, Klesius PH, Arias CR, Evans J, Shoemaker CA, Pereira DJ, Peixoto MT. Isolation and characterization of strains of Flavobacterium columnare from Brazil. Journal of Fish Diseases. 28: 199-204. PMID 15813861 DOI: 10.1111/J.1365-2761.2005.00616.X  0.328
2004 Arias CR, Welker TL, Shoemaker CA, Abernathy JW, Klesius PH. Genetic fingerprinting of Flavobacterium columnare isolates from cultured fish. Journal of Applied Microbiology. 97: 421-8. PMID 15239710 DOI: 10.1111/J.1365-2672.2004.02314.X  0.346
2002 Arias CR, Burns JK. A pectinmethylesterase gene associated with a heat-stable extract from citrus. Journal of Agricultural and Food Chemistry. 50: 3465-72. PMID 12033812 DOI: 10.1021/Jf020146C  0.335
2002 Arias CR, Burns JK, Friedrich LM, Goodrich RM, Parish ME. Yeast species associated with orange juice: evaluation of different identification methods. Applied and Environmental Microbiology. 68: 1955-61. PMID 11916718 DOI: 10.1128/Aem.68.4.1955-1961.2002  0.401
2000 Macián MC, Arias CR, Aznar R, Garay E, Pujalte MJ. Identification of Vibrio spp. (other than V. vulnificus) recovered on CPC agar from marine natural samples International Microbiology. 3: 51-53. DOI: 10.2436/Im.V3I1.9242  0.363
1999 Moreno Y, Arias CR, Meier H, Garay E, Aznar R. In situ analysis of the bacterial communities associated to farmed eel by whole-cell hybridization. Letters in Applied Microbiology. 29: 160-5. PMID 10530037 DOI: 10.1046/J.1365-2672.1999.00588.X  0.345
1999 Arias CR, Macián MC, Aznar R, Garay E, Pujalte MJ. Low incidence of Vibrio vulnificus among Vibrio isolates from sea water and shellfish of the western Mediterranean coast. Journal of Applied Microbiology. 86: 125-34. PMID 10030016 DOI: 10.1046/J.1365-2672.1999.00641.X  0.374
1998 Arias CR, Aznar R, Pujalte MJ, Garay E. A comparison of strategies for the detection and recovery of Vibrio vulnificus from marine samples of the western Mediterranean coast. Systematic and Applied Microbiology. 21: 128-34. PMID 9741117 DOI: 10.1016/S0723-2020(98)80016-7  0.37
1998 Arias CR, Pujalte MJ, Garay E, Aznar R. Genetic relatedness among environmental, clinical, and diseased-eel Vibrio vulnificus isolates from different geographic regions by ribotyping and randomly amplified polymorphic DNA PCR. Applied and Environmental Microbiology. 64: 3403-10. PMID 9726889 DOI: 10.1128/Aem.64.9.3403-3410.1998  0.373
1997 Arias CR, Verdonck L, Swings J, Aznar R, Garay E. A Polyphasic Approach to Study the Intraspecif ic Diversity Amongst Vibrio vulnificus Isolates Systematic and Applied Microbiology. 20: 622-633. DOI: 10.1016/S0723-2020(97)80034-3  0.364
1995 Arias CR, Garay E, Aznar R. Nested PCR method for rapid and sensitive detection of Vibrio vulnificus in fish, sediments, and water. Applied and Environmental Microbiology. 61: 3476-8. PMID 7574657 DOI: 10.1128/Aem.61.9.3476-3478.1995  0.35
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