| Year |
Citation |
Score |
| 2022 |
Lee JS, Jahani M, Huang K, Mandel JR, Marek LF, Burke JM, Langlade NB, Owens GL, Rieseberg LH. Expression complementation of gene presence/absence polymorphisms in hybrids contributes importantly to heterosis in sunflower. Journal of Advanced Research. 42: 83-98. PMID 36513422 DOI: 10.1016/j.jare.2022.04.008 |
0.575 |
|
| 2022 |
Hernández F, Vercellino RB, Pandolfo C, Mandel JR, Presotto A. Rapid evolution of seed dormancy during sunflower de-domestication. The Journal of Heredity. PMID 35192723 DOI: 10.1093/jhered/esac009 |
0.363 |
|
| 2021 |
Siniscalchi CM, Hidalgo O, Palazzesi L, Pellicer J, Pokorny L, Maurin O, Leitch IJ, Forest F, Baker WJ, Mandel JR. Lineage-specific vs. universal: A comparison of the Compositae1061 and Angiosperms353 enrichment panels in the sunflower family. Applications in Plant Sciences. 9. PMID 34336403 DOI: 10.1002/aps3.11422 |
0.307 |
|
| 2020 |
Mandel JR, Ramsey AJ, Holley JM, Scott VA, Mody D, Abbot P. Disentangling complex inheritance patterns of plant organellar genomes: an example from carrot. The Journal of Heredity. PMID 32886780 DOI: 10.1093/Jhered/Esaa037 |
0.787 |
|
| 2020 |
Gonçalves DJP, Jansen RK, Ruhlman TA, Mandel JR. Under the rug: Abandoning persistent misconceptions that obfuscate organelle evolution. Molecular Phylogenetics and Evolution. 151: 106903. PMID 32628998 DOI: 10.1016/J.Ympev.2020.106903 |
0.501 |
|
| 2020 |
Thapa R, Bayer RJ, Mandel JR. Phylogenomics Resolves the Relationships within Antennaria (Asteraceae, Gnaphalieae) and Yields New Insights into its Morphological Character Evolution and Biogeography Systematic Botany. 45: 387-402. DOI: 10.1600/036364420X15862837791221 |
0.715 |
|
| 2019 |
Siniscalchi CM, Loeuille B, Funk VA, Mandel JR, Pirani JR. Phylogenomics Yields New Insight Into Relationships Within Vernonieae (Asteraceae). Frontiers in Plant Science. 10: 1224. PMID 31749813 DOI: 10.3389/Fpls.2019.01224 |
0.692 |
|
| 2019 |
Jones KE, Fér T, Schmickl RE, Dikow RB, Funk VA, Herrando-Moraira S, Johnston PR, Kilian N, Siniscalchi CM, Susanna A, Slovák M, Thapa R, Watson LE, Mandel JR. An empirical assessment of a single family-wide hybrid capture locus set at multiple evolutionary timescales in Asteraceae. Applications in Plant Sciences. 7: e11295. PMID 31667023 DOI: 10.1002/Aps3.11295 |
0.636 |
|
| 2019 |
Mandel JR, Major CK, Bayer RJ, Moore JE. Clonal diversity and spatial genetic structure in the long-lived herb, Prairie trillium. Plos One. 14: e0224123. PMID 31634380 DOI: 10.1371/Journal.Pone.0224123 |
0.717 |
|
| 2019 |
Hernández F, Presotto A, Poverene M, Mandel JR. Genetic diversity and population structure of wild sunflower (Helianthus annuus L.) in Argentina: reconstructing its invasion history. The Journal of Heredity. PMID 31353398 DOI: 10.1093/Jhered/Esz047 |
0.469 |
|
| 2019 |
Thapa R, Bayer RJ, Mandel JR. Development and characterization of microsatellite markers for (Asteraceae) and close relatives. Applications in Plant Sciences. 7: e11268. PMID 31236315 DOI: 10.1002/Aps3.11268 |
0.713 |
|
| 2019 |
Mandel JR, Dikow RB, Siniscalchi CM, Thapa R, Watson LE, Funk VA. A fully resolved backbone phylogeny reveals numerous dispersals and explosive diversifications throughout the history of Asteraceae. Proceedings of the National Academy of Sciences of the United States of America. PMID 31209018 DOI: 10.1073/Pnas.1903871116 |
0.682 |
|
| 2019 |
Ramsey AJ, McCauley DE, Mandel JR. Heteroplasmy and Patterns of Cytonuclear Linkage Disequilibrium in Wild Carrot. Integrative and Comparative Biology. PMID 31187130 DOI: 10.1093/Icb/Icz102 |
0.793 |
|
| 2019 |
Mandel JR. A Jurassic leap for flowering plants. Nature Plants. PMID 31061534 DOI: 10.1038/S41477-019-0423-Y |
0.346 |
|
| 2019 |
Herrando-Moraira S, Antonio Calleja J, Galbany-Casals M, Garcia-Jacas N, Liu JQ, López-Alvarado J, López-Pujol J, Mandel JR, Massó S, Montes-Moreno N, Roquet C, Sáez L, Sennikov A, Susanna A, Vilatersana R. Nuclear and plastid DNA phylogeny of tribe Cardueae (Compositae) with Hyb-Seq data: A new subtribal classification and a temporal diversification framework. Molecular Phylogenetics and Evolution. PMID 31059792 DOI: 10.1016/J.Ympev.2019.05.001 |
0.391 |
|
| 2019 |
Phan V, Pham DT, Melton C, Ramsey A, Daigle BJ, Mandel JR. icHET: Interactive Visualization of Cytoplasmic Heteroplasmy. Bioinformatics (Oxford, England). PMID 31038667 DOI: 10.1093/Bioinformatics/Btz300 |
0.767 |
|
| 2019 |
Dowell JA, Reynolds EC, Pliakas TP, Mandel JR, Burke JM, Donovan LA, Mason CM. Genome wide association mapping of floral traits in cultivated sunflower (Helianthus annuus). The Journal of Heredity. PMID 30847479 DOI: 10.1093/Jhered/Esz013 |
0.581 |
|
| 2019 |
Ramsey AJ, Ballou SM, Mandel JR. ALTERED POLLINATION ECOLOGY OF A NATIVE PLANT SPECIES IN THE PRESENCE OF AN ATTRACTIVE NON-NATIVE PLANT SPECIES Rhodora. 121: 159. DOI: 10.3119/18-11 |
0.758 |
|
| 2019 |
Siniscalchi CM, Loeuille B, Pirani JR, Mandel JR. Using genomic data to develop SSR markers for species of Chresta (Vernonieae, Asteraceae) from the Caatinga Brazilian Journal of Botany. 42: 661-669. DOI: 10.1007/S40415-019-00569-4 |
0.503 |
|
| 2018 |
Hübner S, Bercovich N, Todesco M, Mandel JR, Odenheimer J, Ziegler E, Lee JS, Baute GJ, Owens GL, Grassa CJ, Ebert DP, Ostevik KL, Moyers BT, Yakimowski S, Masalia RR, et al. Sunflower pan-genome analysis shows that hybridization altered gene content and disease resistance. Nature Plants. PMID 30598532 DOI: 10.1038/S41477-018-0329-0 |
0.79 |
|
| 2018 |
Herrando-Moraira S, Calleja JA, Carnicero P, Fujikawa K, Galbany-Casals M, Garcia-Jacas N, Im H, Kim S, Liu J, López-Alvarado J, López-Pujol J, Mandel JR, Massó S, Mehregan I, Montes-Moreno N, et al. Exploring data processing strategies in NGS target enrichment to disentangle radiations in the tribe Cardueae (Compositae) Molecular Phylogenetics and Evolution. 128: 69-87. PMID 30036700 DOI: 10.1016/J.Ympev.2018.07.012 |
0.417 |
|
| 2017 |
Badouin H, Gouzy J, Grassa CJ, Murat F, Staton SE, Cottret L, Lelandais-Brière C, Owens GL, Carrère S, Mayjonade B, Legrand L, Gill N, Kane NC, Bowers JE, Hubner S, ... ... Mandel JR, et al. The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution. Nature. 546: 148-152. PMID 28538728 DOI: 10.1038/Nature22380 |
0.796 |
|
| 2017 |
Mandel JR, Barker MS, Bayer RJ, Dikow RB, Gao T, Jones KE, Keeley S, Kilian N, Ma H, Siniscalchi CM, Susanna A, Thapa R, Watson L, Funk VA. The Compositae Tree of Life in the age of phylogenomics Journal of Systematics and Evolution. 55: 405-410. DOI: 10.1111/Jse.12265 |
0.69 |
|
| 2016 |
Folk RA, Mandel JR, Freudenstein JV. Ancestral Gene Flow and Parallel Organellar Genome Capture Result in Extreme Phylogenomic Discord in a Lineage of Angiosperms. Systematic Biology. PMID 27637567 DOI: 10.1093/Sysbio/Syw083 |
0.515 |
|
| 2016 |
Mandel JR, Ramsey AJ, Iorizzo M, Simon PW. Patterns of Gene Flow between Crop and Wild Carrot, Daucus carota (Apiaceae) in the United States. Plos One. 11: e0161971. PMID 27603516 DOI: 10.1371/Journal.Pone.0161971 |
0.797 |
|
| 2015 |
Folk RA, Mandel JR, Freudenstein JV. A protocol for targeted enrichment of intron-containing sequence markers for recent radiations: A phylogenomic example from Heuchera (Saxifragaceae). Applications in Plant Sciences. 3. PMID 26312196 DOI: 10.3732/Apps.1500039 |
0.402 |
|
| 2015 |
Mandel JR, McCauley DE. Pervasive Mitochondrial Sequence Heteroplasmy in Natural Populations of Wild Carrot, Daucus carota spp. carota L. Plos One. 10: e0136303. PMID 26295342 DOI: 10.1371/Journal.Pone.0136303 |
0.711 |
|
| 2015 |
Nambeesan SU, Mandel JR, Bowers JE, Marek LF, Ebert D, Corbi J, Rieseberg LH, Knapp SJ, Burke JM. Association mapping in sunflower (Helianthus annuus L.) reveals independent control of apical vs. basal branching. Bmc Plant Biology. 15: 84. PMID 25887675 DOI: 10.1186/S12870-015-0458-9 |
0.644 |
|
| 2015 |
Mandel JR, Dikow RB, Funk VA. Using phylogenomics to resolve mega-families: An example from Compositae Journal of Systematics and Evolution. 53: 391-402. DOI: 10.1111/Jse.12167 |
0.48 |
|
| 2015 |
Mason CM, Ishibashi CDA, Rea AM, Mandel JR, Burke JM, Donovan LA. Environmental requirements trump genetic factors in explaining narrow endemism in two imperiled Florida sunflowers Conservation Genetics. DOI: 10.1007/S10592-015-0739-8 |
0.57 |
|
| 2014 |
Mandel JR, Dikow RB, Funk VA, Masalia RR, Staton SE, Kozik A, Michelmore RW, Rieseberg LH, Burke JM. A target enrichment method for gathering phylogenetic information from hundreds of loci: An example from the Compositae. Applications in Plant Sciences. 2. PMID 25202605 DOI: 10.3732/Apps.1300085 |
0.728 |
|
| 2014 |
Mandel JR, McAssey EV, Nambeesan S, Garcia-Navarro E, Burke JM. Molecular evolution of candidate genes for crop-related traits in sunflower (Helianthus annuus L.). Plos One. 9: e99620. PMID 24914686 DOI: 10.1371/Journal.Pone.0099620 |
0.796 |
|
| 2014 |
Baskauf CJ, Jinks NC, Mandel JR, McCauley DE. Population genetics of Braun's Rockcress (Boechera perstellata, Brassicaceae), an endangered plant with a disjunct distribution. The Journal of Heredity. 105: 265-75. PMID 24163403 DOI: 10.1093/Jhered/Est074 |
0.655 |
|
| 2013 |
Chapman MA, Mandel JR, Burke JM. Sequence validation of candidates for selectively important genes in sunflower. Plos One. 8: e71941. PMID 23991009 DOI: 10.1371/Journal.Pone.0071941 |
0.718 |
|
| 2013 |
Mandel JR, Nambeesan S, Bowers JE, Marek LF, Ebert D, Rieseberg LH, Knapp SJ, Burke JM. Association mapping and the genomic consequences of selection in sunflower. Plos Genetics. 9: e1003378. PMID 23555290 DOI: 10.1371/Journal.Pgen.1003378 |
0.724 |
|
| 2013 |
Gevaert SD, Mandel JR, Burke JM, Donovan LA. High genetic diversity and low population structure in Porter's sunflower (Helianthus porteri). The Journal of Heredity. 104: 407-15. PMID 23487323 DOI: 10.1093/Jhered/Est009 |
0.583 |
|
| 2013 |
Mandel JR, Milton EF, Donovan LA, Knapp SJ, Burke JM. Genetic diversity and population structure in the rare Algodones sunflower (Helianthus niveus ssp. tephrodes) Conservation Genetics. 14: 31-40. DOI: 10.1007/S10592-012-0421-3 |
0.695 |
|
| 2012 |
Mandel JR, McAssey EV, Roland KM, McCauley DE. Mitochondrial gene diversity associated with the atp9 stop codon in natural populations of wild carrot (Daucus carota ssp. carota). The Journal of Heredity. 103: 418-25. PMID 22337997 DOI: 10.1093/Jhered/Esr142 |
0.787 |
|
| 2012 |
Bachlava E, Taylor CA, Tang S, Bowers JE, Mandel JR, Burke JM, Knapp SJ. SNP discovery and development of a high-density genotyping array for sunflower. Plos One. 7: e29814. PMID 22238659 DOI: 10.1371/Journal.Pone.0029814 |
0.567 |
|
| 2011 |
Mandel JR, Dechaine JM, Marek LF, Burke JM. Genetic diversity and population structure in cultivated sunflower and a comparison to its wild progenitor, Helianthus annuus L. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 123: 693-704. PMID 21638000 DOI: 10.1007/S00122-011-1619-3 |
0.618 |
|
| 2010 |
Bentley KE, Mandel JR, McCauley DE. Paternal leakage and heteroplasmy of mitochondrial genomes in Silene vulgaris: evidence from experimental crosses. Genetics. 185: 961-8. PMID 20421605 DOI: 10.1534/Genetics.110.115360 |
0.663 |
|
| 2010 |
Mandel JR. Clonal diversity, spatial dynamics, and small genetic population size in the rare sunflower, Helianthus verticillatus Conservation Genetics. 11: 2055-2059. DOI: 10.1007/S10592-010-0062-3 |
0.455 |
|
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