Stephan Ossowski - Publications

Affiliations: 
CRAG, Spain 

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Zapata L, Ding J, Willing EM, Hartwig B, Bezdan D, Jiao WB, Patel V, Velikkakam James G, Koornneef M, Ossowski S, Schneeberger K. Chromosome-level assembly of Arabidopsis thaliana Ler reveals the extent of translocation and inversion polymorphisms. Proceedings of the National Academy of Sciences of the United States of America. PMID 27354520 DOI: 10.1073/pnas.1607532113  0.48
2015 Sorge S, Ha N, Polychronidou M, Friedrich J, Bezdan D, Kaspar P, Schaefer MH, Ossowski S, Henz SR, Mundorf J, Rätzer J, Papagiannouli F, Lohmann I. The cis-regulatory code of Hox function in Drosophila. The Embo Journal. 34: 2862. PMID 26564906 DOI: 10.15252/embj.201593321  0.48
2015 Durst R, Sauls K, Peal DS, deVlaming A, Toomer K, Leyne M, Salani M, Talkowski ME, Brand H, Perrocheau M, Simpson C, Jett C, Stone MR, Charles F, Chiang C, ... ... Ossowski S, et al. Mutations in DCHS1 cause mitral valve prolapse. Nature. PMID 26258302 DOI: 10.1038/nature14670  0.48
2015 Hor H, Francescatto L, Bartesaghi L, Ortega-Cubero S, Kousi M, Lorenzo-Betancor O, Jiménez-Jiménez FJ, Gironell A, Clarimón J, Drechsel O, Agúndez JA, Kenzelmann Broz D, Chiquet-Ehrismann R, Lleó A, Coria F, ... ... Ossowski S, et al. Missense mutations in TENM4, a regulator of axon guidance and central myelination, cause essential tremor. Human Molecular Genetics. 24: 5677-86. PMID 26188006 DOI: 10.1093/hmg/ddv281  0.48
2014 Chae E, Bomblies K, Kim ST, Karelina D, Zaidem M, Ossowski S, Martín-Pizarro C, Laitinen RA, Rowan BA, Tenenboim H, Lechner S, Demar M, Habring-Müller A, Lanz C, Rätsch G, et al. Species-wide genetic incompatibility analysis identifies immune genes as hot spots of deleterious epistasis. Cell. 159: 1341-51. PMID 25467443 DOI: 10.1016/j.cell.2014.10.049  0.48
2014 Almouzni G, Altucci L, Amati B, Ashley N, Baulcombe D, Beaujean N, Bock C, Bongcam-Rudloff E, Bousquet J, Braun S, Bressac-de Paillerets B, Bussemakers M, Clarke L, Conesa A, Estivill X, ... ... Ossowski S, et al. Relationship between genome and epigenome--challenges and requirements for future research. Bmc Genomics. 15: 487. PMID 24942464 DOI: 10.1186/1471-2164-15-487  0.48
2014 Zee PC, Mendes-Soares H, Yu YT, Kraemer SA, Keller H, Ossowski S, Schneeberger K, Velicer GJ. A shift from magnitude to sign epistasis during adaptive evolution of a bacterial social trait. Evolution; International Journal of Organic Evolution. 68: 2701-8. PMID 24909926 DOI: 10.1111/evo.12467  0.48
2014 Trujillano D, Perez B, González J, Tornador C, Navarrete R, Escaramis G, Ossowski S, Armengol L, Cornejo V, Desviat LR, Ugarte M, Estivill X. Accurate molecular diagnosis of phenylketonuria and tetrahydrobiopterin-deficient hyperphenylalaninemias using high-throughput targeted sequencing. European Journal of Human Genetics : Ejhg. 22: 528-34. PMID 23942198 DOI: 10.1038/ejhg.2013.175  0.48
2013 Wijnker E, Velikkakam James G, Ding J, Becker F, Klasen JR, Rawat V, Rowan BA, de Jong DF, de Snoo CB, Zapata L, Huettel B, de Jong H, Ossowski S, Weigel D, Koornneef M, et al. The genomic landscape of meiotic crossovers and gene conversions in Arabidopsis thaliana. Elife. 2: e01426. PMID 24347547 DOI: 10.7554/eLife.01426  0.48
2013 Hauser F, Chen W, Deinlein U, Chang K, Ossowski S, Fitz J, Hannon GJ, Schroeder JI. A genomic-scale artificial microRNA library as a tool to investigate the functionally redundant gene space in Arabidopsis. The Plant Cell. 25: 2848-63. PMID 23956262 DOI: 10.1105/tpc.113.112805  0.48
2013 Koenig D, Jiménez-Gómez JM, Kimura S, Fulop D, Chitwood DH, Headland LR, Kumar R, Covington MF, Devisetty UK, Tat AV, Tohge T, Bolger A, Schneeberger K, Ossowski S, Lanz C, et al. Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proceedings of the National Academy of Sciences of the United States of America. 110: E2655-62. PMID 23803858 DOI: 10.1073/pnas.1309606110  0.48
2013 Warthmann N, Ossowski S, Schwab R, Weigel D. Artificial microRNAs for specific gene silencing in rice. Methods in Molecular Biology (Clifton, N.J.). 956: 131-49. PMID 23135850 DOI: 10.1007/978-1-62703-194-3_11  0.48
2013 Kopischke M, Westphal L, Schneeberger K, Clark R, Ossowski S, Wewer V, Fuchs R, Landtag J, Hause G, Dörmann P, Lipka V, Weigel D, Schulze-Lefert P, Scheel D, Rosahl S. Impaired sterol ester synthesis alters the response of Arabidopsis thaliana to Phytophthora infestans. The Plant Journal : For Cell and Molecular Biology. 73: 456-68. PMID 23072470 DOI: 10.1111/tpj.12046  0.48
2012 Paschold A, Jia Y, Marcon C, Lund S, Larson NB, Yeh CT, Ossowski S, Lanz C, Nettleton D, Schnable PS, Hochholdinger F. Complementation contributes to transcriptome complexity in maize (Zea mays L.) hybrids relative to their inbred parents. Genome Research. 22: 2445-54. PMID 23086286 DOI: 10.1101/gr.138461.112  0.48
2012 Sorge S, Ha N, Polychronidou M, Friedrich J, Bezdan D, Kaspar P, Schaefer MH, Ossowski S, Henz SR, Mundorf J, Rätzer J, Papagiannouli F, Lohmann I. The cis-regulatory code of Hox function in Drosophila. The Embo Journal. 31: 3323-33. PMID 22781127 DOI: 10.1038/emboj.2012.179  0.48
2012 Rutter MT, Roles A, Conner JK, Shaw RG, Shaw FH, Schneeberger K, Ossowski S, Weigel D, Fenster CB. Fitness of Arabidopsis thaliana mutation accumulation lines whose spontaneous mutations are known. Evolution; International Journal of Organic Evolution. 66: 2335-9. PMID 22759306 DOI: 10.1111/j.1558-5646.2012.01583.x  0.48
2012 Louis-Dit-Picard H, Barc J, Trujillano D, Miserey-Lenkei S, Bouatia-Naji N, Pylypenko O, Beaurain G, Bonnefond A, Sand O, Simian C, Vidal-Petiot E, Soukaseum C, Mandet C, Broux F, Chabre O, ... ... Ossowski S, et al. KLHL3 mutations cause familial hyperkalemic hypertension by impairing ion transport in the distal nephron. Nature Genetics. 44: 456-60, S1-3. PMID 22406640 DOI: 10.1038/ng.2218  0.48
2011 Cao J, Schneeberger K, Ossowski S, Günther T, Bender S, Fitz J, Koenig D, Lanz C, Stegle O, Lippert C, Wang X, Ott F, Müller J, Alonso-Blanco C, Borgwardt K, et al. Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nature Genetics. 43: 956-63. PMID 21874002 DOI: 10.1038/ng.911  0.64
2011 Klein JD, Ossowski S, Schneeberger K, Weigel D, Huson DH. LOCAS--a low coverage assembly tool for resequencing projects. Plos One. 6: e23455. PMID 21858125 DOI: 10.1371/journal.pone.0023455  0.64
2011 Guo YL, Fitz J, Schneeberger K, Ossowski S, Cao J, Weigel D. Genome-wide comparison of nucleotide-binding site-leucine-rich repeat-encoding genes in Arabidopsis. Plant Physiology. 157: 757-69. PMID 21810963 DOI: 10.1104/pp.111.181990  0.64
2011 Schneeberger K, Ossowski S, Ott F, Klein JD, Wang X, Lanz C, Smith LM, Cao J, Fitz J, Warthmann N, Henz SR, Huson DH, Weigel D. Reference-guided assembly of four diverse Arabidopsis thaliana genomes. Proceedings of the National Academy of Sciences of the United States of America. 108: 10249-54. PMID 21646520 DOI: 10.1073/pnas.1107739108  0.64
2011 Hu TT, Pattyn P, Bakker EG, Cao J, Cheng JF, Clark RM, Fahlgren N, Fawcett JA, Grimwood J, Gundlach H, Haberer G, Hollister JD, Ossowski S, Ottilar RP, Salamov AA, et al. The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nature Genetics. 43: 476-81. PMID 21478890 DOI: 10.1038/ng.807  0.48
2010 Piazza P, Bailey CD, Cartolano M, Krieger J, Cao J, Ossowski S, Schneeberger K, He F, de Meaux J, Hall N, Macleod N, Filatov D, Hay A, Tsiantis M. Arabidopsis thaliana leaf form evolved via loss of KNOX expression in leaves in association with a selective sweep. Current Biology : Cb. 20: 2223-8. PMID 21129970 DOI: 10.1016/j.cub.2010.11.037  0.48
2010 Laitinen RA, Schneeberger K, Jelly NS, Ossowski S, Weigel D. Identification of a spontaneous frame shift mutation in a nonreference Arabidopsis accession using whole genome sequencing. Plant Physiology. 153: 652-4. PMID 20388671 DOI: 10.1104/pp.110.156448  0.64
2010 Khraiwesh B, Arif MA, Seumel GI, Ossowski S, Weigel D, Reski R, Frank W. Transcriptional control of gene expression by microRNAs. Cell. 140: 111-22. PMID 20085706 DOI: 10.1016/j.cell.2009.12.023  0.64
2010 Ossowski S, Schneeberger K, Lucas-Lledó JI, Warthmann N, Clark RM, Shaw RG, Weigel D, Lynch M. The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana. Science (New York, N.Y.). 327: 92-4. PMID 20044577 DOI: 10.1126/science.1180677  0.48
2010 Schwab R, Ossowski S, Warthmann N, Weigel D. Directed gene silencing with artificial microRNAs. Methods in Molecular Biology (Clifton, N.J.). 592: 71-88. PMID 19802590 DOI: 10.1007/978-1-60327-005-2_6  0.64
2009 Out AA, van Minderhout IJ, Goeman JJ, Ariyurek Y, Ossowski S, Schneeberger K, Weigel D, van Galen M, Taschner PE, Tops CM, Breuning MH, van Ommen GJ, den Dunnen JT, Devilee P, Hes FJ. Deep sequencing to reveal new variants in pooled DNA samples. Human Mutation. 30: 1703-12. PMID 19842214 DOI: 10.1002/humu.21122  0.48
2009 Schneeberger K, Hagmann J, Ossowski S, Warthmann N, Gesing S, Kohlbacher O, Weigel D. Simultaneous alignment of short reads against multiple genomes. Genome Biology. 10: R98. PMID 19761611 DOI: 10.1186/gb-2009-10-9-r98  0.64
2009 Mirouze M, Reinders J, Bucher E, Nishimura T, Schneeberger K, Ossowski S, Cao J, Weigel D, Paszkowski J, Mathieu O. Selective epigenetic control of retrotransposition in Arabidopsis. Nature. 461: 427-30. PMID 19734882 DOI: 10.1038/nature08328  0.64
2009 Schneeberger K, Ossowski S, Lanz C, Juul T, Petersen AH, Nielsen KL, Jørgensen JE, Weigel D, Andersen SU. SHOREmap: simultaneous mapping and mutation identification by deep sequencing. Nature Methods. 6: 550-1. PMID 19644454 DOI: 10.1038/nmeth0809-550  0.64
2009 Molnar A, Bassett A, Thuenemann E, Schwach F, Karkare S, Ossowski S, Weigel D, Baulcombe D. Highly specific gene silencing by artificial microRNAs in the unicellular alga Chlamydomonas reinhardtii. The Plant Journal : For Cell and Molecular Biology. 58: 165-74. PMID 19054357 DOI: 10.1111/j.1365-313X.2008.03767.x  0.48
2008 Ossowski S, Schneeberger K, Clark RM, Lanz C, Warthmann N, Weigel D. Sequencing of natural strains of Arabidopsis thaliana with short reads. Genome Research. 18: 2024-33. PMID 18818371 DOI: 10.1101/gr.080200.108  0.64
2008 Khraiwesh B, Ossowski S, Weigel D, Reski R, Frank W. Specific gene silencing by artificial MicroRNAs in Physcomitrella patens: an alternative to targeted gene knockouts. Plant Physiology. 148: 684-93. PMID 18753280 DOI: 10.1104/pp.108.128025  0.64
2008 De Bona F, Ossowski S, Schneeberger K, Rätsch G. Optimal spliced alignments of short sequence reads. Bioinformatics (Oxford, England). 24: i174-80. PMID 18689821 DOI: 10.1093/bioinformatics/btn300  0.64
2008 Warthmann N, Chen H, Ossowski S, Weigel D, Hervé P. Highly specific gene silencing by artificial miRNAs in rice. Plos One. 3: e1829. PMID 18350165 DOI: 10.1371/journal.pone.0001829  0.64
2008 Ossowski S, Schwab R, Weigel D. Gene silencing in plants using artificial microRNAs and other small RNAs. The Plant Journal : For Cell and Molecular Biology. 53: 674-90. PMID 18269576 DOI: 10.1111/j.1365-313X.2007.03328.x  0.64
2007 Kim S, Plagnol V, Hu TT, Toomajian C, Clark RM, Ossowski S, Ecker JR, Weigel D, Nordborg M. Recombination and linkage disequilibrium in Arabidopsis thaliana. Nature Genetics. 39: 1151-5. PMID 17676040 DOI: 10.1038/ng2115  0.48
2007 Clark RM, Schweikert G, Toomajian C, Ossowski S, Zeller G, Shinn P, Warthmann N, Hu TT, Fu G, Hinds DA, Chen H, Frazer KA, Huson DH, Schölkopf B, Nordborg M, et al. Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science (New York, N.Y.). 317: 338-42. PMID 17641193 DOI: 10.1126/science.1138632  0.48
2006 Schwab R, Ossowski S, Riester M, Warthmann N, Weigel D. Highly specific gene silencing by artificial microRNAs in Arabidopsis. The Plant Cell. 18: 1121-33. PMID 16531494 DOI: 10.1105/tpc.105.039834  0.64
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