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Gijsbert A. van der Marel - Publications

Affiliations: 
chemistry Leiden University, Leiden, Netherlands 
Area:
Synthetic organic chemistry
Website:
https://www.universiteitleiden.nl/en/staffmembers/gijs-van-der-marel#tab-1
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280 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Ofman TP, Heming JJA, Nin-Hill A, Küllmer F, Moran E, Bennett M, Steneker R, Klein AM, Ruijgrok G, Kok K, Armstrong ZWB, Aerts JMFG, van der Marel GA, Rovira C, Davies GJ, et al. Conformational and Electronic Variations in 1,2- and 1,6-Cyclophellitols and Their Impact on Retaining α-Glucosidase Inhibition. Chemistry (Weinheim An Der Bergstrasse, Germany). e202400723. PMID 38623783 DOI: 10.1002/chem.202400723  0.55
2024 Remmerswaal WA, Elferink H, Houthuijs KJ, Hansen T, Ter Braak F, Berden G, van der Vorm S, Martens J, Oomens J, van der Marel GA, Boltje TJ, Codée JDC. Anomeric Triflates versus Dioxanium Ions: Different Product-Forming Intermediates from 3-Acyl Benzylidene Mannosyl and Glucosyl Donors. The Journal of Organic Chemistry. PMID 38235652 DOI: 10.1021/acs.joc.3c02262  0.378
2023 Males A, Kok K, Nin-Hill A, de Koster N, van den Beukel S, Beenakker TJM, van der Marel GA, Codée JDC, Aerts JMFG, Overkleeft HS, Rovira C, Davies GJ, Artola M. -cyclosulfamidate mannose-configured cyclitol allows isoform-dependent inhibition of GH47 α-d-mannosidases through a bump-hole strategy. Chemical Science. 14: 13581-13586. PMID 38033892 DOI: 10.1039/d3sc05016e  0.559
2023 van Hengst JMA, Hellemons RJC, Remmerswaal WA, van de Vrande KNA, Hansen T, van der Vorm S, Overkleeft HS, van der Marel GA, Codée JDC. Mapping the effect of configuration and protecting group pattern on glycosyl acceptor reactivity. Chemical Science. 14: 1532-1542. PMID 36794180 DOI: 10.1039/d2sc06139b  0.328
2022 Demkiw KM, Remmerswaal WA, Hansen T, van der Marel GA, Codée JDC, Woerpel K. Halogen Atom Participation in Guiding the Stereochemical Outcomes of Acetal Substitution Reactions. Angewandte Chemie (International Ed. in English). PMID 35980341 DOI: 10.1002/anie.202209401  0.358
2022 Remmerswaal WA, Houthuijs KJ, van de Ven R, Elferink H, Hansen T, Berden G, Overkleeft HS, van der Marel GA, Rutjes FPJT, Filippov DV, Boltje TJ, Martens J, Oomens J, Codée JDC. Stabilization of Glucosyl Dioxolenium Ions by "Dual Participation" of the 2,2-Dimethyl-2-(-nitrophenyl)acetyl (DMNPA) Protection Group for 1,2--Glucosylation. The Journal of Organic Chemistry. PMID 35748115 DOI: 10.1021/acs.joc.2c00808  0.365
2021 Reijneveld JF, Marino L, Cao TP, Cheng TY, Dam D, Shahine A, Witte MD, Filippov DV, Suliman S, van der Marel GA, Moody DB, Minnaard AJ, Rossjohn J, Codee J, Van Rhijn I. Rational design of a hydrolysis-resistant mycobacterial phosphoglycolipid antigen presented by CD1c to T cells. The Journal of Biological Chemistry. 101197. PMID 34536421 DOI: 10.1016/j.jbc.2021.101197  0.589
2021 Overkleeft HS, Schröder S, Offen W, Males A, Jin Y, de Boer C, Enotarpi J, van der Marel G, Florea B, Codée J, Davies G. The Development of Non-Hydrolysable Oligosaccharide Activity-Based Inactivators for Endoglycanases: A Case Study on a-1,6 Mannanases. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 33878235 DOI: 10.1002/chem.202101255  0.604
2021 Wander DPA, van der Zanden SY, Vriends MBL, van Veen BC, Vlaming JGC, Bruyning T, Hansen T, van der Marel GA, Overkleeft HS, Neefjes JJC, Codée JDC. Synthetic (,-Dimethyl)doxorubicin Glycosyl Diastereomers to Dissect Modes of Action of Anthracycline Anticancer Drugs. The Journal of Organic Chemistry. PMID 33783212 DOI: 10.1021/acs.joc.1c00220  0.409
2021 Hansen T, Vermeeren P, Yoshisada R, Filippov DV, van der Marel GA, Codée JDC, Hamlin TA. How Lewis Acids Catalyze Ring-Openings of Cyclohexene Oxide. The Journal of Organic Chemistry. PMID 33538169 DOI: 10.1021/acs.joc.0c02955  0.63
2021 McGregor NGS, Coines J, Borlandelli V, Amaki S, Artola M, Nin-Hill A, Linzel D, Yamada C, Arakawa T, Ishiwata A, Ito Y, van der Marel GA, Codée JDC, Fushinobu S, Overkleeft HS, et al. Cysteine Nucleophiles in Glycosidase Catalysis: Application of a Covalent β-l-Arabinofuranosidase Inhibitor. Angewandte Chemie (International Ed. in English). PMID 33528085 DOI: 10.1002/anie.202013920  0.573
2020 van den Ende T, Heuts J, Gential G, Visser M, van de Graaff M, Ho N, Jiskoot W, Valentijn R, Meeuwenoord N, Overkleeft H, Codée J, van der Burg S, van der Marel G, Verdegaal E, Ossendorp F, et al. Simplified monopalmitoyl Toll-like receptor 2 ligand mini-UPam for self-adjuvanting neoantigen-based synthetic cancer vaccines. Chembiochem : a European Journal of Chemical Biology. PMID 33180981 DOI: 10.1002/cbic.202000687  0.586
2020 Hansen T, Ofman TP, Vlaming JGC, Gagarinov IA, van Beek J, Goté TA, Tichem JM, Ruijgrok G, Overkleeft HS, Filippov DV, van der Marel GA, Codée JDC. Reactivity-Stereoselectivity Mapping for the Assembly of Mycobacterium Marinum Lipooligosaccharides. Angewandte Chemie (International Ed. in English). PMID 32856761 DOI: 10.1002/anie.202010280  0.366
2020 Hansen T, Elferink H, van Hengst JMA, Houthuijs KJ, Remmerswaal WA, Kromm A, Berden G, van der Vorm S, Rijs AM, Overkleeft HS, Filippov DV, Rutjes FPJT, van der Marel GA, Martens J, Oomens J, et al. Characterization of glycosyl dioxolenium ions and their role in glycosylation reactions. Nature Communications. 11: 2664. PMID 32471982 DOI: 10.1038/S41467-020-16362-X  0.361
2020 McGregor N, Artola M, Nin-Hill A, Linzel D, Haon M, Reijngoud J, Ram AFJ, Rosso MN, van der Marel GA, Codée JDC, van Wezel GP, Berrin JG, Rovira C, Overkleeft HS, Davies GJ. Rational Design of Mechanism-Based Inhibitors and Activity-Based Probes for the Identification of Retaining α-L-Arabinofuranosidases. Journal of the American Chemical Society. PMID 32053363 DOI: 10.1021/Jacs.9B11351  0.537
2019 Zhang Q, Gimeno A, Santana D, Wang Z, Valdés-Balbin Y, Rodríguez-Noda LM, Hansen T, Kong L, Shen M, Overkleeft HS, Vérez-Bencomo V, van der Marel GA, Jiménez-Barbero J, Chiodo F, Codée JDC. Synthetic, Zwitterionic Sp1 Oligosaccharides Adopt a Helical Structure Crucial for Antibody Interaction. Acs Central Science. 5: 1407-1416. PMID 31482123 DOI: 10.1021/Acscentsci.9B00454  0.408
2019 van der Vorm S, Hansen T, van Hengst JMA, Overkleeft HS, van der Marel GA, Codée JDC. Acceptor reactivity in glycosylation reactions. Chemical Society Reviews. PMID 31287452 DOI: 10.1039/c8cs00369f  0.348
2019 Schröder SP, de Boer C, McGregor NGS, Rowland RJ, Moroz O, Blagova E, Reijngoud J, Arentshorst M, Osborn D, Morant MD, Abbate E, Stringer MA, Krogh KBRM, Raich L, Rovira C, ... ... van der Marel GA, et al. Dynamic and Functional Profiling of Xylan-Degrading Enzymes in Secretomes Using Activity-Based Probes. Acs Central Science. 5: 1067-1078. PMID 31263766 DOI: 10.1021/Acscentsci.9B00221  0.531
2019 Hansen T, Lebedel L, Remmerswaal WA, van der Vorm S, Wander DPA, Somers M, Overkleeft HS, Filippov DV, Désiré J, Mingot A, Bleriot Y, van der Marel GA, Thibaudeau S, Codée JDC. Defining the S1 Side of Glycosylation Reactions: Stereoselectivity of Glycopyranosyl Cations. Acs Central Science. 5: 781-788. PMID 31139714 DOI: 10.1021/acscentsci.9b00042  0.381
2019 van der Vorm S, Hansen T, van Rijssel ER, Dekkers R, Madern JM, Overkleeft HS, Filippov DV, van der Marel GA, Codée JDC. Furanosyl oxocarbenium ion Conformational Energy Landscape maps as a tool to study the glycosylation stereoselectivity of 2-azidofuranoses, 2-fluorofuranoses and methyl furanosyl uronates. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 30882938 DOI: 10.1002/chem.201900651  0.408
2019 Madern JM, Hansen T, van Rijssel ER, Kistemaker HAV, van der Vorm S, Overkleeft HS, van der Marel GA, Filippov DV, Codée JDC. Synthesis, reactivity and stereoselectivity of 4-thiofuranosides. The Journal of Organic Chemistry. PMID 30605336 DOI: 10.1021/acs.joc.8b02536  0.357
2018 Artola M, Kuo CL, McMahon SA, Oehler V, Hansen T, van der Lienden M, He X, van den Elst H, Florea BI, Kermode AR, Gloster TM, van der Marel GA, Codée JDC, Overkleeft HS, Aerts JMFG. New irreversible α-L-iduronidase inhibitors and activity-based probes. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 30307091 DOI: 10.1002/chem.201804662  0.42
2018 van der Vorm S, van Hengst JMA, Bakker M, Overkleeft HS, van der Marel GA, Codée J. Mapping Glycosyl Acceptor Reactivity - Glycosylation Stereoselectivity Relationships. Angewandte Chemie (International Ed. in English). PMID 29603532 DOI: 10.1002/anie.201802899  0.59
2018 Schröder SP, Wu L, Artola M, Hansen T, Offen WA, Ferraz MJ, Li KY, Aerts JMFG, van der Marel GA, Codée JDC, Davies GJ, Overkleeft HS. Gluco-1H-imidazole: a new class of azole-type β-glucosidase inhibitor. Journal of the American Chemical Society. PMID 29601200 DOI: 10.1021/Jacs.8B02399  0.373
2018 van der Es D, Berni F, Hogendorf WFJ, Meeuwenoord N, Laverde D, van Diepen A, Overkleeft HS, Filippov DV, Hokke CH, Huebner J, van der Marel GA, Codée J. Streamlined synthesis and evaluation of teichoic acid fragments. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 29389054 DOI: 10.1002/chem.201800153  0.622
2017 Zhang Q, Overkleeft HS, van der Marel GA, Codée JD. Synthetic zwitterionic polysaccharides. Current Opinion in Chemical Biology. 40: 95-101. PMID 28888143 DOI: 10.1016/j.cbpa.2017.07.010  0.587
2017 Artola M, Wu L, Ferraz MJ, Kuo CL, Raich L, Breen IZ, Offen WA, Codée JDC, van der Marel GA, Rovira C, Aerts JMFG, Davies GJ, Overkleeft HS. 1,6-Cyclophellitol Cyclosulfates: A New Class of Irreversible Glycosidase Inhibitor. Acs Central Science. 3: 784-793. PMID 28776021 DOI: 10.1021/Acscentsci.7B00214  0.564
2017 Beenakker TJM, Wander D, Offen WA, Artola M, Raich L, Ferraz MJ, Li KY, Houben JHPM, van Rijssel ER, Hansen T, van der Marel GA, Codée JDC, Aerts JMFG, Rovira C, Davies GJ, et al. Carba-Cyclophellitols are Neutral Retaining Glucosidase Inhibitors. Journal of the American Chemical Society. PMID 28463498 DOI: 10.1021/Jacs.7B01773  0.637
2017 van der Vorm S, Overkleeft HS, van der Marel GA, Codée JD. Stereoselectivity of conformationally restricted glucosazide donors. The Journal of Organic Chemistry. PMID 28401764 DOI: 10.1021/acs.joc.7b00470  0.597
2017 van Rijssel E, Janssen A, Males A, Davies G, van der Marel G, Overkleeft HS, Codée J. Conformational behaviour of mannuronic acid based azasugars. Chembiochem : a European Journal of Chemical Biology. PMID 28256791 DOI: 10.1002/Cbic.201700080  0.632
2017 Hagen B, Ali S, Overkleeft HS, van der Marel GA, Codée JD. Mapping the reactivity and selectivity of 2-azidofucosyl donors for the assembly of N-acetyl fucosamine containing bacterial oligosaccharides. The Journal of Organic Chemistry. PMID 28051314 DOI: 10.1021/acs.joc.6b02593  0.625
2016 van der Es D, Hogendorf WF, Overkleeft HS, van der Marel GA, Codée JD. Teichoic acids: synthesis and applications. Chemical Society Reviews. PMID 27990523 DOI: 10.1039/c6cs00270f  0.615
2016 Jiang J, Kuo CL, Wu L, Franke C, Kallemeijn WW, Florea BI, van Meel E, van der Marel GA, Codée JD, Boot RG, Davies GJ, Overkleeft HS, Aerts JM. Detection of Active Mammalian GH31 α-Glucosidases in Health and Disease Using In-Class, Broad-Spectrum Activity-Based Probes. Acs Central Science. 2: 351-8. PMID 27280170 DOI: 10.1021/Acscentsci.6B00057  0.582
2016 Mirzaian M, Wisse P, Ferraz MJ, Marques AR, Gabriel TL, van Roomen CP, Ottenhoff R, van Eijk M, Codée JD, van der Marel GA, Overkleeft HS, Aerts JM. Accurate quantification of sphingosine-1-phosphate in normal and Fabry disease plasma, cells and tissues by LC-MS/MS with (13)C-encoded natural S1P as internal standard. Clinica Chimica Acta; International Journal of Clinical Chemistry. 459: 36-44. PMID 27221202 DOI: 10.1016/j.cca.2016.05.017  0.559
2016 van der Es D, Groenia NA, Laverde D, Overkleeft HS, Huebner J, van der Marel GA, Codée JD. Synthesis of E. faecium wall teichoic acid fragments. Bioorganic & Medicinal Chemistry. PMID 26993744 DOI: 10.1016/j.bmc.2016.03.019  0.631
2015 van den Berg RJ, van Rijssel ER, Ferraz MJ, Houben J, Strijland A, Donker-Koopman WE, Wennekes T, Bonger KM, Ghisaidoobe AB, Hoogendoorn S, van der Marel GA, Codée JD, Overkleeft HS, Aerts JM. Synthesis and Evaluation of Hybrid Structures Composed of Two Glucosylceramide Synthase Inhibitors. Chemmedchem. PMID 26492941 DOI: 10.1002/cmdc.201500407  0.589
2015 Volbeda AG, Kistemaker HA, Overkleeft HS, van der Marel GA, Filippov DV, Codée JD. Chemoselective Cleavage of p-Methoxybenzyl and 2-Naphthylmethyl Ethers Using a Catalytic Amount of HCl in Hexafluoro-2-propanol. The Journal of Organic Chemistry. 80: 8796-806. PMID 26230920 DOI: 10.1021/acs.joc.5b01030  0.6
2015 Jiang J, Beenakker TJ, Kallemeijn WW, van der Marel GA, van den Elst H, Codée JD, Aerts JM, Overkleeft HS. Comparing Cyclophellitol N-Alkyl and N-Acyl Cyclophellitol Aziridines as Activity-Based Glycosidase Probes. Chemistry (Weinheim An Der Bergstrasse, Germany). 21: 10861-9. PMID 26073749 DOI: 10.1002/chem.201501313  0.594
2015 Wisse P, de Geus MA, Cross G, van den Nieuwendijk AM, van Rooden EJ, van den Berg RJ, Aerts JM, van der Marel GA, Codée JD, Overkleeft HS. Synthesis of 6-Hydroxysphingosine and α-Hydroxy Ceramide Using a Cross-Metathesis Strategy. The Journal of Organic Chemistry. 80: 7258-65. PMID 26061009 DOI: 10.1021/acs.joc.5b00823  0.58
2015 Willems MM, Zom GG, Meeuwenoord N, Khan S, Ossendorp F, Overkleeft HS, van der Marel GA, Filippov DV, Codée JD. Lipophilic Muramyl Dipeptide-Antigen Conjugates as Immunostimulating Agents. Chemmedchem. PMID 26059481 DOI: 10.1002/cmdc.201500196  0.563
2015 Zhang Q, van Rijssel ER, Walvoort MT, Overkleeft HS, van der Marel GA, Codée JD. Acceptor reactivity in the total synthesis of alginate fragments containing α-L-guluronic acid and β-D-mannuronic acid. Angewandte Chemie (International Ed. in English). 54: 7670-3. PMID 25960101 DOI: 10.1002/anie.201502581  0.632
2015 van Rijssel ER, van Delft P, van Marle DV, Bijvoets SM, Lodder G, Overkleeft HS, van der Marel GA, Filippov DV, Codée JD. Stereoselectivity in the Lewis acid mediated reduction of ketofuranoses. The Journal of Organic Chemistry. 80: 4553-65. PMID 25826382 DOI: 10.1021/acs.joc.5b00419  0.625
2014 Kallemeijn WW, Witte MD, Voorn-Brouwer TM, Walvoort MT, Li KY, Codée JD, van der Marel GA, Boot RG, Overkleeft HS, Aerts JM. A sensitive gel-based method combining distinct cyclophellitol-based probes for the identification of acid/base residues in human retaining β-glucosidases. The Journal of Biological Chemistry. 289: 35351-62. PMID 25344605 DOI: 10.1074/jbc.M114.593376  0.592
2014 Laverde D, Wobser D, Romero-Saavedra F, Hogendorf W, Van Der Marel G, Berthold M, Kropec A, Codee J, Huebner J. Synthetic teichoic acid conjugate vaccine against nosocomial Gram-positive bacteria Plos One. 9. PMID 25333799 DOI: 10.1371/journal.pone.0110953  0.587
2014 Li KY, Jiang J, Witte MD, Kallemeijn WW, Donker-Koopman WE, Boot RG, Aerts JM, Codée JD, van der Marel GA, Overkleeft HS. Exploring functional cyclophellitol analogues as human retaining beta-glucosidase inhibitors. Organic & Biomolecular Chemistry. 12: 7786-91. PMID 25156485 DOI: 10.1039/c4ob01611d  0.595
2014 Willems LI, Beenakker TJ, Murray B, Scheij S, Kallemeijn WW, Boot RG, Verhoek M, Donker-Koopman WE, Ferraz MJ, van Rijssel ER, Florea BI, Codée JD, van der Marel GA, Aerts JM, Overkleeft HS. Potent and selective activity-based probes for GH27 human retaining α-galactosidases. Journal of the American Chemical Society. 136: 11622-5. PMID 25105979 DOI: 10.1021/ja507040n  0.582
2014 Duivenvoorden BA, Ghauharali K, Scheij S, Boot RG, Aerts JM, van der Marel GA, Overkleeft HS, Codée JD. Design and synthesis of 4'-O-alkyl-chitobiosyl-4-methylumbelliferone as human chitinase fluorogenic substrates. Carbohydrate Research. 399: 26-37. PMID 25104395 DOI: 10.1016/j.carres.2014.07.007  0.603
2014 Willems LI, Jiang J, Li KY, Witte MD, Kallemeijn WW, Beenakker TJ, Schröder SP, Aerts JM, van der Marel GA, Codée JD, Overkleeft HS. From covalent glycosidase inhibitors to activity-based glycosidase probes. Chemistry (Weinheim An Der Bergstrasse, Germany). 20: 10864-72. PMID 25100671 DOI: 10.1002/Chem.201404014  0.598
2014 van Rijssel ER, van Delft P, Lodder G, Overkleeft HS, van der Marel GA, Filippov DV, Codée JD. Furanosyl oxocarbenium ion stability and stereoselectivity. Angewandte Chemie (International Ed. in English). 53: 10381-5. PMID 25081839 DOI: 10.1002/anie.201405477  0.594
2014 Willems MM, Zom GG, Khan S, Meeuwenoord N, Melief CJ, van der Stelt M, Overkleeft HS, Codée JD, van der Marel GA, Ossendorp F, Filippov DV. N-tetradecylcarbamyl lipopeptides as novel agonists for Toll-like receptor 2. Journal of Medicinal Chemistry. 57: 6873-8. PMID 25019313 DOI: 10.1021/jm500722p  0.587
2014 Willems MM, Zom GG, Meeuwenoord N, Ossendorp FA, Overkleeft HS, van der Marel GA, Codée JD, Filippov DV. Design, automated synthesis and immunological evaluation of NOD2-ligand-antigen conjugates. Beilstein Journal of Organic Chemistry. 10: 1445-53. PMID 24991299 DOI: 10.3762/bjoc.10.148  0.574
2014 Codée JD, Overkleeft HS, van der Marel GA, van Boeckel CA. The synthesis of well-defined heparin and heparan sulfate fragments. Drug Discovery Today. Technologies. 1: 317-26. PMID 24981501 DOI: 10.1016/j.ddtec.2004.11.017  0.595
2014 Castelli R, Schindler S, Walter SM, Kniep F, Overkleeft HS, Van der Marel GA, Huber SM, Codée JD. Activation of glycosyl halides by halogen bonding. Chemistry, An Asian Journal. 9: 2095-8. PMID 24962953 DOI: 10.1002/Asia.201402259  0.598
2013 Rönnols J, Walvoort MT, van der Marel GA, Codée JD, Widmalm G. Chair interconversion and reactivity of mannuronic acid esters. Organic & Biomolecular Chemistry. 11: 8127-34. PMID 24173496 DOI: 10.1039/c3ob41747f  0.631
2013 van Rijssel ER, Goumans TP, Lodder G, Overkleeft HS, van der Marel GA, Codée JD. Chiral pyrroline-based Ugi-three-component reactions are under kinetic control. Organic Letters. 15: 3026-9. PMID 23721351 DOI: 10.1021/ol4012053  0.583
2013 Castelli R, Overkleeft HS, van der Marel GA, Codée JD. 2,2-Dimethyl-4-(4-methoxy-phenoxy) butanoate and 2,2-dimethyl-4-azido butanoate: two new pivaloate-ester-like protecting groups. Organic Letters. 15: 2270-3. PMID 23607790 DOI: 10.1021/ol4008475  0.59
2013 Frihed TG, Walvoort MT, Codée JD, van der Marel GA, Bols M, Pedersen CM. Influence of O6 in mannosylations using benzylidene protected donors: stereoelectronic or conformational effects? The Journal of Organic Chemistry. 78: 2191-205. PMID 23336427 DOI: 10.1021/Jo302455D  0.619
2013 Gold H, Mirzaian M, Dekker N, Joao Ferraz M, Lugtenburg J, Codée JD, van der Marel GA, Overkleeft HS, Linthorst GE, Groener JE, Aerts JM, Poorthuis BJ. Quantification of globotriaosylsphingosine in plasma and urine of fabry patients by stable isotope ultraperformance liquid chromatography-tandem mass spectrometry. Clinical Chemistry. 59: 547-56. PMID 23237761 DOI: 10.1373/Clinchem.2012.192138  0.555
2012 Kallemeijn WW, Li KY, Witte MD, Marques AR, Aten J, Scheij S, Jiang J, Willems LI, Voorn-Brouwer TM, van Roomen CP, Ottenhoff R, Boot RG, van den Elst H, Walvoort MT, Florea BI, ... ... van der Marel GA, et al. Novel activity-based probes for broad-spectrum profiling of retaining β-exoglucosidases in situ and in vivo. Angewandte Chemie (International Ed. in English). 51: 12529-33. PMID 23139194 DOI: 10.1002/anie.201207771  0.581
2012 Barroso S, Castelli R, Baggelaar MP, Geerdink D, ter Horst B, Casas-Arce E, Overkleeft HS, van der Marel GA, Codée JD, Minnaard AJ. Total synthesis of the triglycosyl phenolic glycolipid PGL-tb1 from Mycobacterium tuberculosis. Angewandte Chemie (International Ed. in English). 51: 11774-7. PMID 23086739 DOI: 10.1002/Anie.201206221  0.545
2012 Walvoort MT, Kallemeijn WW, Willems LI, Witte MD, Aerts JM, van der Marel GA, Codée JD, Overkleeft HS. Tuning the leaving group in 2-deoxy-2-fluoroglucoside results in improved activity-based retaining β-glucosidase probes. Chemical Communications (Cambridge, England). 48: 10386-8. PMID 22932951 DOI: 10.1039/c2cc35653h  0.606
2012 Walvoort MT, Volbeda AG, Reintjens NR, van den Elst H, Plante OJ, Overkleeft HS, van der Marel GA, Codée JD. Automated solid-phase synthesis of hyaluronan oligosaccharides. Organic Letters. 14: 3776-9. PMID 22780913 DOI: 10.1021/ol301666n  0.608
2012 Theilacker C, Kropec A, Hammer F, Sava I, Wobser D, Sakinc T, Codée JD, Hogendorf WF, van der Marel GA, Huebner J. Protection against Staphylococcus aureus by antibody to the polyglycerolphosphate backbone of heterologous lipoteichoic acid. The Journal of Infectious Diseases. 205: 1076-85. PMID 22362863 DOI: 10.1093/infdis/jis022  0.577
2012 Walvoort MT, van den Elst H, Plante OJ, Kröck L, Seeberger PH, Overkleeft HS, van der Marel GA, Codée JD. Automated solid-phase synthesis of β-mannuronic acid alginates. Angewandte Chemie (International Ed. in English). 51: 4393-6. PMID 22334421 DOI: 10.1002/Anie.201108744  0.585
2012 Christina AE, van der Es D, Dinkelaar J, Overkleeft HS, van der Marel GA, Codée JD. β-Rhamnosides from 6-thio mannosides. Chemical Communications (Cambridge, England). 48: 2686-8. PMID 22306867 DOI: 10.1039/C2Cc17623H  0.577
2012 Hogendorf WF, Lameijer LN, Beenakker TJ, Overkleeft HS, Filippov DV, Codée JD, Van der Marel GA. Fluorous linker facilitated synthesis of teichoic acid fragments. Organic Letters. 14: 848-51. PMID 22264133 DOI: 10.1021/ol2033652  0.613
2012 de Jong AR, Hagen B, van der Ark V, Overkleeft HS, Codée JD, Van der Marel GA. Exploring and exploiting the reactivity of glucuronic acid donors. The Journal of Organic Chemistry. 77: 108-25. PMID 22126096 DOI: 10.1021/jo201586r  0.613
2012 van der Linden WA, Li N, Hoogendoorn S, Ruben M, Verdoes M, Guo J, Boons GJ, van der Marel GA, Florea BI, Overkleeft HS. Two-step bioorthogonal activity-based proteasome profiling using copper-free click reagents: a comparative study. Bioorganic & Medicinal Chemistry. 20: 662-6. PMID 21757357 DOI: 10.1016/J.Bmc.2011.06.037  0.4
2011 Walvoort MT, Moggré GJ, Lodder G, Overkleeft HS, Codée JD, van der Marel GA. Stereoselective synthesis of 2,3-diamino-2,3-dideoxy-β-D-mannopyranosyl uronates. The Journal of Organic Chemistry. 76: 7301-15. PMID 21793528 DOI: 10.1021/jo201179p  0.63
2011 Walvoort MT, de Witte W, van Dijk J, Dinkelaar J, Lodder G, Overkleeft HS, Codée JD, van der Marel GA. Mannopyranosyl uronic acid donor reactivity. Organic Letters. 13: 4360-3. PMID 21776974 DOI: 10.1021/ol2016862  0.599
2011 Hogendorf WF, Meeuwenoord N, Overkleeft HS, Filippov DV, Laverde D, Kropec A, Huebner J, Van der Marel GA, Codée JD. Automated solid phase synthesis of teichoic acids. Chemical Communications (Cambridge, England). 47: 8961-3. PMID 21734985 DOI: 10.1039/c1cc13132j  0.599
2011 Witte MD, Walvoort MT, Li KY, Kallemeijn WW, Donker-Koopman WE, Boot RG, Aerts JM, Codée JD, van der Marel GA, Overkleeft HS. Activity-based profiling of retaining β-glucosidases: a comparative study. Chembiochem : a European Journal of Chemical Biology. 12: 1263-9. PMID 21538758 DOI: 10.1002/cbic.201000773  0.591
2011 Gold H, Munneke S, Dinkelaar J, Overkleeft HS, Aerts JM, Codée JD, van der Marel GA. A practical synthesis of capped 4-methylumbelliferyl hyaluronan disaccharides and tetrasaccharides as potential hyaluronidase substrates. Carbohydrate Research. 346: 1467-78. PMID 21536258 DOI: 10.1016/j.carres.2011.03.042  0.613
2011 Christina AE, van den Bos LJ, Overkleeft HS, van der Marel GA, Codée JD. Galacturonic acid lactones in the synthesis of all trisaccharide repeating units of the zwitterionic polysaccharide Sp1. The Journal of Organic Chemistry. 76: 1692-706. PMID 21341806 DOI: 10.1021/jo102363d  0.635
2011 Codée JD, Christina AE, Walvoort MT, Overkleeft HS, van der Marel GA. Uronic acids in oligosaccharide and glycoconjugate synthesis. Topics in Current Chemistry. 301: 253-89. PMID 21222193 DOI: 10.1007/128_2010_111  0.614
2010 Walvoort MT, Lodder G, Overkleeft HS, Codée JD, van der Marel GA. Mannosazide methyl uronate donors. Glycosylating properties and use in the construction of β-ManNAcA-containing oligosaccharides. The Journal of Organic Chemistry. 75: 7990-8002. PMID 21062001 DOI: 10.1021/jo101779v  0.614
2010 Walvoort MT, Dinkelaar J, van den Bos LJ, Lodder G, Overkleeft HS, Codée JD, van der Marel GA. The impact of oxacarbenium ion conformers on the stereochemical outcome of glycosylations. Carbohydrate Research. 345: 1252-63. PMID 20347068 DOI: 10.1016/j.carres.2010.02.027  0.607
2009 Walvoort MT, Lodder G, Mazurek J, Overkleeft HS, Codée JD, van der Marel GA. Equatorial anomeric triflates from mannuronic acid esters. Journal of the American Chemical Society. 131: 12080-1. PMID 19663422 DOI: 10.1021/ja905008p  0.617
2009 Dinkelaar J, de Jong AR, van Meer R, Somers M, Lodder G, Overkleeft HS, Codée JD, van der Marel GA. Stereodirecting effect of the pyranosyl C-5 substituent in glycosylation reactions. The Journal of Organic Chemistry. 74: 4982-91. PMID 19489535 DOI: 10.1021/jo900662v  0.607
2009 Dinkelaar J, Gold H, Overkleeft HS, Codée JD, van der Marel GA. Synthesis of hyaluronic acid oligomers using chemoselective and one-pot strategies. The Journal of Organic Chemistry. 74: 4208-16. PMID 19402694 DOI: 10.1021/jo9003713  0.615
2009 Codée JD, van den Bos LJ, de Jong AR, Dinkelaar J, Lodder G, Overkleeft HS, van der Marel GA. The stereodirecting effect of the glycosyl C5-carboxylate ester: stereoselective synthesis of beta-mannuronic acid alginates. The Journal of Organic Chemistry. 74: 38-47. PMID 19035740 DOI: 10.1021/jo8020192  0.624
2008 Dinkelaar J, van den Bos LJ, Hogendorf WF, Lodder G, Overkleeft HS, Codée JD, van der Marel GA. Stereoselective synthesis of L-guluronic acid alginates. Chemistry (Weinheim An Der Bergstrasse, Germany). 14: 9400-11. PMID 18770512 DOI: 10.1002/chem.200800960  0.619
2007 Dinkelaar J, Codée JD, van den Bos LJ, Overkleeft HS, van der Marel GA. Synthesis of hyaluronic acid oligomers using Ph2SO/Tf2O-mediated glycosylations. The Journal of Organic Chemistry. 72: 5737-42. PMID 17585821 DOI: 10.1021/jo070704s  0.609
2005 Codée JD, Litjens RE, van den Bos LJ, Overkleeft HS, van der Marel GA. Thioglycosides in sequential glycosylation strategies. Chemical Society Reviews. 34: 769-82. PMID 16100617 DOI: 10.1039/B417138C  0.568
2005 Voerman G, Cavalli S, van der Marel GA, Pfleiderer W, van Boom JH, Filippov DV. 1,3-Dimethyllumazine derivatives from Limnatis nilotica. Journal of Natural Products. 68: 938-41. PMID 15974624 DOI: 10.1021/np049617a  0.424
2005 Codée JD, Stubba B, Schiattarella M, Overkleeft HS, van Boeckel CA, van Boom JH, van der Marel GA. A modular strategy toward the synthesis of heparin-like oligosaccharides using monomeric building blocks in a sequential glycosylation strategy. Journal of the American Chemical Society. 127: 3767-73. PMID 15771511 DOI: 10.1021/ja045613g  0.673
2005 Timmer MSM, Chumillas MV, Donker-Koopman WE, Aerts JMFG, Van Der Marel GA, Overkleeft HS, Van Boom JH. Selective cross-metathesis of C-allyl-glycosides Journal of Carbohydrate Chemistry. 24: 335-351. DOI: 10.1080/07328300500174887  0.384
2004 Welters MJ, Filippov DV, van den Eeden SJ, Franken KL, Nouta J, Valentijn AR, van der Marel GA, Overkleeft HS, Lipford G, Offringa R, Melief CJ, van Boom JH, van der Burg SH, Drijfhout JW. Chemically synthesized protein as tumour-specific vaccine: immunogenicity and efficacy of synthetic HPV16 E7 in the TC-1 mouse tumour model. Vaccine. 23: 305-11. PMID 15530672 DOI: 10.1016/J.Vaccine.2004.06.008  0.367
2004 Grotenbreg GM, Kronemeijer M, Timmer MS, El Oualid F, van Well RM, Verdoes M, Spalburg E, van Hooft PA, de Neeling AJ, Noort D, van Boom JH, van der Marel GA, Overkleeft HS, Overhand M. A practical synthesis of gramicidin s and sugar amino Acid containing analogues. The Journal of Organic Chemistry. 69: 7851-9. PMID 15527261 DOI: 10.1021/Jo0487449  0.456
2004 van den Berg RJ, Korevaar CG, Overkleeft HS, van der Marel GA, van Boom JH. Effective, high-yielding, and stereospecific total synthesis of D-erythro-(2R,3S)-sphingosine from D-ribo-(2S,3S,4R)-phytosphingosine. The Journal of Organic Chemistry. 69: 5699-704. PMID 15307742 DOI: 10.1021/jo049277y  0.407
2004 El Oualid F, Burm BE, Leroy IM, Cohen LH, van Boom JH, van den Elst H, Overkleeft HS, van der Marel GA, Overhand M. Design, synthesis, and evaluation of sugar amino acid based inhibitors of protein prenyl transferases PFT and PGGT-1. Journal of Medicinal Chemistry. 47: 3920-3. PMID 15267228 DOI: 10.1021/Jm049927Q  0.44
2004 Tromp RA, van Boom SS, Marco Timmers C, van Zutphen S, van der Marel GA, Overkleeft HS, van Boom JH, Reedijk J. The beta-glucuronyl-based prodrug strategy allows for its application on beta-glucuronyl-platinum conjugates. Bioorganic & Medicinal Chemistry Letters. 14: 4273-6. PMID 15261285 DOI: 10.1016/J.Bmcl.2004.06.015  0.372
2004 van Roon AM, Pannu NS, de Vrind JP, van der Marel GA, van Boom JH, Hokke CH, Deelder AM, Abrahams JP. Structure of an anti-Lewis X Fab fragment in complex with its Lewis X antigen. Structure (London, England : 1993). 12: 1227-36. PMID 15242599 DOI: 10.1016/j.str.2004.05.008  0.401
2004 Verhelst SH, Michiels PJ, van der Marel GA, van Boeckel CA, van Boom JH. Surface plasmon resonance evaluation of various aminoglycoside-RNA hairpin interactions reveals low degree of selectivity. Chembiochem : a European Journal of Chemical Biology. 5: 937-42. PMID 15239050 DOI: 10.1002/cbic.200300819  0.381
2004 van den Bos LJ, Codée JD, van der Toorn JC, Boltje TJ, van Boom JH, Overkleeft HS, van der Marel GA. Thioglycuronides: synthesis and application in the assembly of acidic oligosaccharides. Organic Letters. 6: 2165-8. PMID 15200311 DOI: 10.1021/ol049380+  0.674
2004 Petersen L, de Koning MC, van Kuik-Romeijn P, Weterings J, Pol CJ, Platenburg G, Overhand M, van der Marel GA, van Boom JH. Synthesis and in vitro evaluation of PNA-peptide-DETA conjugates as potential cell penetrating artificial ribonucleases. Bioconjugate Chemistry. 15: 576-82. PMID 15149186 DOI: 10.1021/Bc034219P  0.421
2004 van Hooft PA, El Oualid F, Overkleeft HS, van der Marel GA, van Boom JH, Leeuwenburgh MA. Synthesis and elaboration of functionalised carbohydrate-derived spiroketals. Organic & Biomolecular Chemistry. 2: 1395-403. PMID 15105932 DOI: 10.1039/b401699h  0.453
2003 van den Bos LJ, Codée JD, van Boom JH, Overkleeft HS, van der Marel GA. A novel strategy towards the synthesis of orthogonally functionalised 4-aminoglycosides. Organic & Biomolecular Chemistry. 1: 4160-5. PMID 14685319 DOI: 10.1039/b309823k  0.677
2003 Verhelst SH, Paez Martinez B, Timmer MS, Lodder G, van der Marel GA, Overkleeft HS, van Boom JH. A short route toward chiral, polyhydroxylated indolizidines and quinolizidines. The Journal of Organic Chemistry. 68: 9598-603. PMID 14656083 DOI: 10.1021/jo0350662  0.431
2003 Timmer MS, Verdoes M, Sliedregt LA, van der Marel GA, van Boom JH, Overkleeft HS. The use of a mannitol-derived fused oxacycle as a combinatorial scaffold. The Journal of Organic Chemistry. 68: 9406-11. PMID 14629165 DOI: 10.1021/jo0349429  0.466
2003 van Rossenberg SM, Sliedregt-Bol KM, Prince P, van Berkel TJ, van Boom JH, van der Marel GA, Biessen EA. A targeted peptide nucleic acid to down-regulate mouse microsomal triglyceride transfer protein expression in hepatocytes. Bioconjugate Chemistry. 14: 1077-82. PMID 14624620 DOI: 10.1021/bc0340417  0.401
2003 Robillard MS, Bacac M, van den Elst H, Flamigni A, van der Marel GA, van Boom JH, Reedijk J. Automated parallel solid-phase synthesis and anticancer screening of a library of peptide-tethered platinum(II) complexes. Journal of Combinatorial Chemistry. 5: 821-5. PMID 14606811 DOI: 10.1021/Cc030011Z  0.41
2003 Aguilera B, Ghauharali-van der Vlugt K, Helmond MT, Out JM, Donker-Koopman WE, Groener JE, Boot RG, Renkema GH, van der Marel GA, van Boom JH, Overkleeft HS, Aerts JM. Transglycosidase activity of chitotriosidase: improved enzymatic assay for the human macrophage chitinase. The Journal of Biological Chemistry. 278: 40911-6. PMID 12890686 DOI: 10.1074/Jbc.M301804200  0.392
2003 Robillard MS, Davies NP, van der Marel GA, van Boom JH, Reedijk J, Murray V. The interaction of peptide-tethered platinum(II) complexes with DNA. Journal of Inorganic Biochemistry. 96: 331-8. PMID 12888268 DOI: 10.1016/S0162-0134(03)00180-6  0.425
2003 van Rossenberg SM, Sliedregt-Bol KM, Koning G, van den Elst H, van Berkel TJ, van Boom JH, van der Marel GA, Biessen EA. Improvement of hepatocyte-specific gene expression by a targeted colchicine prodrug. Chembiochem : a European Journal of Chemical Biology. 4: 633-9. PMID 12851933 DOI: 10.1002/cbic.200300582  0.397
2003 Grotenbreg GM, Spalburg E, de Neeling AJ, van der Marel GA, Overkleeft HS, van Boom JH, Overhand M. Synthesis and biological evaluation of novel turn-modified gramicidin S analogues. Bioorganic & Medicinal Chemistry. 11: 2835-41. PMID 12788356 DOI: 10.1016/S0968-0896(03)00219-0  0.435
2003 Codée JD, van den Bos LJ, Litjens RE, Overkleeft HS, van Boom JH, van der Marel GA. Sequential one-pot glycosylations using 1-hydroxyl and 1-thiodonors. Organic Letters. 5: 1947-50. PMID 12762693 DOI: 10.1021/ol034528v  0.662
2003 de Visser PC, Kriek NM, van Hooft PA, Van Schepdael A, Filippov DV, van der Marel GA, Overkleeft HS, van Boom JH, Noort D. Solid-phase synthesis of polymyxin B1 and analogues via a safety-catch approach. The Journal of Peptide Research : Official Journal of the American Peptide Society. 61: 298-306. PMID 12753377 DOI: 10.1034/j.1399-3011.2003.00061.x  0.455
2003 Codée JD, Litjens RE, den Heeten R, Overkleeft HS, van Boom JH, van der Marel GA. Ph2SO/Tf2O: a powerful promotor system in chemoselective glycosylations using thioglycosides. Organic Letters. 5: 1519-22. PMID 12713313 DOI: 10.1021/ol034312t  0.658
2003 Heetebrij RJ, de Kort M, Meeuwenoord NJ, den Dulk H, van der Marel GA, van Boom JH, Reedijk J. A versatile approach towards regioselective platinated DNA sequences. Chemistry (Weinheim An Der Bergstrasse, Germany). 9: 1823-7. PMID 12698440 DOI: 10.1002/Chem.200390209  0.436
2003 van Well RM, Overkleeft HS, van der Marel GA, Bruss D, Thibault G, de Groot PG, van Boom JH, Overhand M. Solid-phase synthesis of cyclic RGD-furanoid sugar amino acid peptides as integrin inhibitors. Bioorganic & Medicinal Chemistry Letters. 13: 331-4. PMID 12565923 DOI: 10.1016/S0960-894X(02)01022-3  0.401
2003 Leeuwenburgh MA, Van Der Marel GA, Overkleeft HS, Van Boom JH. From α-1,2-Anhydrosugars to C-Glycosides: The Influence of Lewis Acids and Nucleophiles on the Stereochemistry Journal of Carbohydrate Chemistry. 22: 549-564. DOI: 10.1081/CAR-120026458  0.426
2002 Schmidt KS, Boudvillain M, Schwartz A, van der Marel GA, van Boom JH, Reedijk J, Lippert B. Monofunctionally trans-diammine platinum(II)-modified peptide nucleic acid oligomers: a new generation of potential antisense drugs. Chemistry (Weinheim An Der Bergstrasse, Germany). 8: 5566-70. PMID 12458496 DOI: 10.1002/1521-3765(20021216)8:24<5566::Aid-Chem5566>3.0.Co;2-#  0.464
2002 Van Rossenberg SM, Sliedregt-Bol KM, Meeuwenoord NJ, Van Berkel TJ, Van Boom JH, Van Der Marel GA, Biessen EA. Targeted lysosome disruptive elements for improvement of parenchymal liver cell-specific gene delivery. The Journal of Biological Chemistry. 277: 45803-10. PMID 12237290 DOI: 10.1074/jbc.M203510200  0.378
2002 Rapozzi V, Burm BE, Cogoi S, van der Marel GA, van Boom JH, Quadrifoglio F, Xodo LE. Antiproliferative effect in chronic myeloid leukaemia cells by antisense peptide nucleic acids. Nucleic Acids Research. 30: 3712-21. PMID 12202756  0.427
2002 Verhoeven EE, van Kesteren M, Turner JJ, van der Marel GA, van Boom JH, Moolenaar GF, Goosen N. The C-terminal region of Escherichia coli UvrC contributes to the flexibility of the UvrABC nucleotide excision repair system. Nucleic Acids Research. 30: 2492-500. PMID 12034838 DOI: 10.1093/Nar/30.11.2492  0.453
2001 Aguilera B, Wolf LB, Nieczypor P, Rutjes FP, Overkleeft HS, van Hest JC, Schoemaker HE, Wang B, Mol JC, Fürstner A, Overhand M, van der Marel GA, van Boom JH. Synthesis of diaminosuberic acid derivatives via ring-closing alkyne metathesis. The Journal of Organic Chemistry. 66: 3584-9. PMID 11348148 DOI: 10.1021/Jo001734X  0.446
2001 Sliedregt LA, van Rossenberg SM, Autar R, Valentijn AR, van der Marel GA, van Boom JH, Piperi C, van der Merwe PA, Kuiper J, van Berkel TJ, Biessen EA. Design and synthesis of a multivalent homing device for targeting to murine CD22. Bioorganic & Medicinal Chemistry. 9: 85-97. PMID 11197350 DOI: 10.1016/S0968-0896(00)00224-8  0.378
2001 Cogoi S, Suraci C, Del Terra E, Diviacco S, van der Marel G, van Boom J, Quadrifoglio F, Xodo L. Downregulation of c-Ki-ras promoter activity by triplex-forming oligonucleotides endogenously generated in human 293 cells. Antisense & Nucleic Acid Drug Development. 10: 283-95. PMID 10984122 DOI: 10.1089/108729000421466  0.403
2000 Verheijen JC, Chen L, Bayly SF, Torrence PF, van der Marel GA, van Boom JH. Synthesis and RNAse L binding and activation of a 2-5A-(5')-DNA-(3')-PNA chimera, a novel potential antisense molecule. Nucleosides, Nucleotides & Nucleic Acids. 19: 1821-30. PMID 11200276 DOI: 10.1080/15257770008045463  0.441
2000 Verheijen JC, van Der Marel GA, van Boom JH, Metzler-Nolte N. Transition metal derivatives of peptide nucleic acid (PNA) oligomers-synthesis, characterization, and DNA binding. Bioconjugate Chemistry. 11: 741-3. PMID 11087319 DOI: 10.1021/bc0000740  0.482
2000 de Kort M, Regenbogen AD, Valentijn AR, Challiss RA, Iwata Y, Miyamoto S, van der Marel GA, van Boom JH. Spirophostins: conformationally restricted analogues of adenophostin A. Chemistry (Weinheim An Der Bergstrasse, Germany). 6: 2696-704. PMID 10985718 DOI: 10.1002/1521-3765(20000804)6:15<2696::AID-CHEM2696>3.0.CO;2-Y  0.411
2000 de Kort M, Correa V, Valentijn AR, van der Marel GA, Potter BV, Taylor CW, van Boom JH. Synthesis of potent agonists of the D-myo-inositol 1,4, 5-trisphosphate receptor based on clustered disaccharide polyphosphate analogues of adenophostin A. Journal of Medicinal Chemistry. 43: 3295-303. PMID 10966748 DOI: 10.1021/Jm000957C  0.422
2000 Verheijen JC, van Roon AM, Meeuwenoord NJ, Stuivenberg HR, Bayly SF, Chen L, van der Marel GA, Torrence PF, van Boom JH. Incorporation of a 4-hydroxy-N-acetylprolinol nucleotide analogue improves the 3'-exonuclease stability of 2'-5'-oligoadenylate-antisense conjugates. Bioorganic & Medicinal Chemistry Letters. 10: 801-4. PMID 10782690 DOI: 10.1016/S0960-894X(00)00100-1  0.443
2000 Moolenaar GF, Herron MF, Monaco V, van der Marel GA, van Boom JH, Visse R, Goosen N. The role of ATP binding and hydrolysis by UvrB during nucleotide excision repair. The Journal of Biological Chemistry. 275: 8044-50. PMID 10713125 DOI: 10.1074/Jbc.275.11.8044  0.45
2000 Moolenaar GF, Monaco V, van der Marel GA, van Boom JH, Visse R, Goosen N. The effect of the DNA flanking the lesion on formation of the UvrB-DNA preincision complex. Mechanism for the UvrA-mediated loading of UvrB onto a DNA damaged site. The Journal of Biological Chemistry. 275: 8038-43. PMID 10713124 DOI: 10.1074/Jbc.275.11.8038  0.443
1999 Cross M, Kieft R, Sabatini R, Wilm M, de Kort M, van der Marel GA, van Boom JH, van Leeuwen F, Borst P. The modified base J is the target for a novel DNA-binding protein in kinetoplastid protozoans. The Embo Journal. 18: 6573-81. PMID 10562569 DOI: 10.1093/Emboj/18.22.6573  0.444
1999 Buijsman RC, Basten JE, Dreef-Tromp CM, van der Marel GA, van Boeckel CA, van Boom JH. Synthesis of heparin-like antithrombotics having perphosphorylated thrombin binding domains. Bioorganic & Medicinal Chemistry. 7: 1881-90. PMID 10530936 DOI: 10.1016/S0968-0896(99)00139-X  0.405
1999 Buijsman RC, Basten JE, van Dinther TG, van der Marel GA, van Boeckel CA, van Boom JH. Design and synthesis of a novel synthetic NAPAP-penta-saccharide conjugate displaying a dual antithrombotic action. Bioorganic & Medicinal Chemistry Letters. 9: 2013-8. PMID 10450972 DOI: 10.1016/S0960-894X(99)00320-0  0.449
1999 Verheijen JC, van der Marel GA, van Boom JH, Bayly SF, Player MR, Torrence PF. 2,5-oligoadenylate-peptide nucleic acids (2-5A-PNAs) activate RNase L. Bioorganic & Medicinal Chemistry. 7: 449-55. PMID 10220031 DOI: 10.1016/S0968-0896(98)00258-2  0.406
1999 Beecroft MD, Marchant JS, Riley AM, Van Straten NC, Van der Marel GA, Van Boom JH, Potter BV, Taylor CW. Acyclophostin: a ribose-modified analog of adenophostin A with high affinity for inositol 1,4,5-trisphosphate receptors and pH-dependent efficacy. Molecular Pharmacology. 55: 109-17. PMID 9882704 DOI: 10.1124/Mol.55.1.109  0.378
1998 Gao YG, Robinson H, Guan Y, Liaw YC, van Boom JH, van der Marel GA, Wang AH. Molecular structure of two crystal forms of cyclic triadenylic acid at 1A resolution. Journal of Biomolecular Structure & Dynamics. 16: 69-76. PMID 9745896 DOI: 10.1080/07391102.1998.10508228  0.466
1997 van Dongen MJ, Mooren MM, Willems EF, van der Marel GA, van Boom JH, Wijmenga SS, Hilbers CW. Structural features of the DNA hairpin d(ATCCTA-GTTA-TAGGAT): formation of a G-A base pair in the loop. Nucleic Acids Research. 25: 1537-47. PMID 9092659 DOI: 10.1093/nar/25.8.1537  0.468
1997 Slijper M, Boelens R, Davis AL, Konings RN, van der Marel GA, van Boom JH, Kaptein R. Backbone and side chain dynamics of lac repressor headpiece (1-56) and its complex with DNA. Biochemistry. 36: 249-54. PMID 8993340 DOI: 10.1021/Bi961670D  0.468
1996 van Delft FL, de Kort M, van Der Marel GA, van Boom JH. Use of a Novel alpha-Hydroxyethylating Reagent in the Stereoselective Synthesis of Lincosamine. The Journal of Organic Chemistry. 61: 1883-1885. PMID 11667071  0.387
1996 Zegelaar-Jaarsveld K, Smits SA, van der Marel GA, van Boom JH. Synthesis of a pentasaccharide corresponding to the repeating unit of the exopolysaccharide from Cryptococcus neoformans serovar D. Bioorganic & Medicinal Chemistry. 4: 1819-32. PMID 9007267 DOI: 10.1016/S0968-0896(96)00164-2  0.471
1996 Ohishi H, Terasoma N, Nakanishi I, van der Marel G, van Boom JH, Rich A, Wang AH, Hakoshima T, Tomita K. Interaction between left-handed Z-DNA and polyamine - 3. The crystal structure of the d(CG)3 and thermospermine complex. Febs Letters. 398: 291-6. PMID 8977125 DOI: 10.1016/S0014-5793(96)01225-2  0.469
1996 van Dongen MJ, Wijmenga SS, van der Marel GA, van Boom JH, Hilbers CW. The transition from a neutral-pH double helix to a low-pH triple helix induces a conformational switch in the CCCG tetraloop closing a Watson-Crick stem. Journal of Molecular Biology. 263: 715-29. PMID 8947571 DOI: 10.1006/jmbi.1996.0611  0.481
1996 Ohishi H, Nakanishi I, Inubushi K, van der Marel G, van Boom JH, Rich A, Wang AH, Hakoshima T, Tomita K. Interaction between the left-handed Z-DNA and polyamine-2. The crystal structure of the d(CG)3 and spermidine complex. Febs Letters. 391: 153-6. PMID 8706905 DOI: 10.1016/0014-5793(96)00723-5  0.454
1996 van Dongen MJ, Heus HA, Wymenga SS, van der Marel GA, van Boom JH, Hilbers CW. Unambiguous structure characterization of a DNA-RNA triple helix by 15N- and 13C-filtered NOESY spectroscopy. Biochemistry. 35: 1733-9. PMID 8639652 DOI: 10.1021/bi952002f  0.468
1995 Bloemberg GV, Lagas RM, van Leeuwen S, Van der Marel GA, Van Boom JH, Lugtenberg BJ, Spaink HP. Substrate specificity and kinetic studies of nodulation protein NodL of Rhizobium leguminosarum. Biochemistry. 34: 12712-20. PMID 7548024 DOI: 10.1021/Bi00039A030  0.427
1994 Vega MC, García Sáez I, Aymamí J, Eritja R, Van der Marel GA, Van Boom JH, Rich A, Coll M. Three-dimensional crystal structure of the A-tract DNA dodecamer d(CGCAAATTTGCG) complexed with the minor-groove-binding drug Hoechst 33258. European Journal of Biochemistry / Febs. 222: 721-6. PMID 7517864 DOI: 10.1111/j.1432-1033.1994.tb18917.x  0.462
1994 Wijmenga SS, Heus HA, Werten B, van der Marel GA, van Boom JH, Hilbers CW. Assignment strategies and analysis of cross-peak patterns and intensities in the three-dimensional homonuclear TOCSY-NOESY of RNA. Journal of Magnetic Resonance. Series B. 103: 134-41. PMID 7511032 DOI: 10.1006/jmrb.1994.1021  0.448
1993 Zuurmond HM, Veeneman GH, van der Marel GA, van Boom JH. Iodonium ion-assisted synthesis of a haptenic tetrasaccharide fragment corresponding to the inner cell-wall glycopeptidolipid of Mycobacterium avium serotype 4. Carbohydrate Research. 241: 153-64. PMID 8472251  0.374
1993 Tabernero L, Verdaguer N, Coll M, Fita I, van der Marel GA, van Boom JH, Rich A, Aymamí J. Molecular structure of the A-tract DNA dodecamer d(CGCAAATTTGCG) complexed with the minor groove binding drug netropsin. Biochemistry. 32: 8403-10. PMID 8395202 DOI: 10.1021/Bi00084A004  0.462
1993 Yang D, Gao Y, Robinson H, van der Marel GA, van Boom JH, Wang AH. Structural effects of the C2-methylhypoxanthine:cytosine base pair in B-DNA: A combined NMR and X-ray diffraction study of d(CGC[m2I]AATTCGCG). Biochemistry. 32: 8672-81. PMID 8357809  0.501
1993 Jaishree TN, van der Marel GA, van Boom JH, Wang AH. Structural influence of RNA incorporation in DNA: quantitative nuclear magnetic resonance refinement of d(CG)r(CG)d(CG) and d(CG)r(C)d(TAGCG). Biochemistry. 32: 4903-11. PMID 7683912  0.501
1992 Cognet JA, Gabarro-Arpa J, Le Bret M, van der Marel GA, van Boom JH, Fazakerley GV. Solution conformation of an oligonucleotide containing a G.G mismatch determined by nuclear magnetic resonance and molecular mechanics. Nucleic Acids Research. 19: 6771-9. PMID 1837078 DOI: 10.1093/NAR/19.24.6771  0.471
1992 Vink C, Yeheskiely E, van der Marel GA, van Boom JH, Plasterk RH. Site-specific hydrolysis and alcoholysis of human immunodeficiency virus DNA termini mediated by the viral integrase protein. Nucleic Acids Research. 19: 6691-8. PMID 1662361 DOI: 10.1093/NAR/19.24.6691  0.436
1992 Kellenbach ER, Remerowski ML, Eib D, Boelens R, van der Marel GA, van den Elst H, van Boom JH, Kaptein R. Synthesis of isotope labeled oligonucleotides and their use in an NMR study of a protein-DNA complex. Nucleic Acids Research. 20: 653-7. PMID 1542561 DOI: 10.1093/Nar/20.4.653  0.474
1992 Dreef-Tromp CM, van der Maarel JC, van den Elst H, van der Marel GA, van Boom JH. Solid-phase synthesis of the nucleopeptide fragment H-Asp-Ser[pAAAGTAAGCC]-Glu-OH from the nucleoprotein of Bacillus subtilis phage phi 29. Nucleic Acids Research. 20: 4015-20. PMID 1508685  0.467
1992 Dreef CE, Jansze JP, Elie CJ, van der Marel GA, van Boom JH. Synthesis of racemic 5-phosphonate analogues of myo-inositol 1,4,5-tris- and 1,3,4,5-tetrakis-phosphate. Carbohydrate Research. 234: 37-50. PMID 1468080  0.4
1992 Zhang H, van der Marel GA, van Boom JH, Wang AH. Conformational perturbation of the anticancer nucleotide arabinosylcytosine on Z-DNA: molecular structure of (araC-dG)3 at 1.3 A resolution. Biopolymers. 32: 1559-69. PMID 1457732 DOI: 10.1002/bip.360321113  0.502
1992 Robinson H, van der Marel GA, van Boom JH, Wang AH. Unusual DNA conformation at low pH revealed by NMR: parallel-stranded DNA duplex with homo base pairs. Biochemistry. 31: 10510-7. PMID 1420168  0.477
1992 Schmieder P, Ippel JH, van den Elst H, van der Marel GA, van Boom JH, Altona C, Kessler H. Heteronuclear NMR of DNA with the heteronucleus in natural abundance: facilitated assignment and extraction of coupling constants. Nucleic Acids Research. 20: 4747-51. PMID 1408787 DOI: 10.1093/Nar/20.18.4747  0.432
1992 Sriram M, van der Marel GA, Roelen HL, van Boom JH, Wang AH. Structural consequences of a carcinogenic alkylation lesion on DNA: effect of O6-ethylguanine on the molecular structure of the d(CGC[e6G]AATTCGCG)-netropsin complex. Biochemistry. 31: 11823-34. PMID 1332773  0.501
1992 Dreef-Tromp CM, van den Elst H, van den Boogaart JE, van der Marel GA, van Boom JH. Solid-phase synthesis of an RNA nucleopeptide fragment from the nucleoprotein of poliovirus. Nucleic Acids Research. 20: 2435-9. PMID 1317954  0.43
1991 Ohishi H, Kunisawa S, van der Marel G, van Boom JH, Rich A, Wang AH, Tomita K, Hakoshima T. Interaction between the left-handed Z-DNA and polyamine. The crystal structure of the d(CG)3 and N-(2-aminoethyl)-1,4-diamino-butane complex. Febs Letters. 284: 238-44. PMID 2060642 DOI: 10.1016/0014-5793(91)80694-X  0.473
1991 Gao YG, Liaw YC, Li YK, van der Marel GA, van Boom JH, Wang AH. Facile formation of a crosslinked adduct between DNA and the daunorubicin derivative MAR70 mediated by formaldehyde: molecular structure of the MAR70-d(CGTnACG) covalent adduct. Proceedings of the National Academy of Sciences of the United States of America. 88: 4845-9. PMID 2052564 DOI: 10.1073/PNAS.88.11.4845  0.525
1991 Xodo LE, Manzini G, Quadrifoglio F, van der Marel G, van Boom J. DNA hairpin loops in solution. Correlation between primary structure, thermostability and reactivity with single-strand-specific nuclease from mung bean. Nucleic Acids Research. 19: 1505-11. PMID 2027758 DOI: 10.1093/NAR/19.7.1505  0.487
1991 Roelen HC, Bijsterbosch MK, Bakkeren HF, van Berkel TJ, Kempen HJ, Buytenhek M, van der Marel GA, van Boom JH. Water-soluble cholesteryl-containing phosphorothioate monogalactosides: synthesis, properties, and use in lowering blood cholesterol by directing plasma lipoproteins to the liver. Journal of Medicinal Chemistry. 34: 1036-42. PMID 2002447 DOI: 10.1021/jm00107a024  0.376
1991 Xodo LE, Manzini G, Quadrifoglio F, van der Marel GA, van Boom JH. Effect of 5-methylcytosine on the stability of triple-stranded DNA--a thermodynamic study. Nucleic Acids Research. 19: 5625-31. PMID 1945840 DOI: 10.1093/NAR/19.20.5625  0.449
1991 Blommers MJ, van de Ven FJ, van der Marel GA, van Boom JH, Hilbers CW. The three-dimensional structure of a DNA hairpin in solution two-dimensional NMR studies and structural analysis of d(ATCCTATTTATAGGAT). European Journal of Biochemistry / Febs. 201: 33-51. PMID 1915376 DOI: 10.1111/J.1432-1033.1991.TB16253.X  0.492
1991 Gao YG, van der Marel GA, van Boom JH, Wang AH. Molecular structure of a DNA decamber containing an anticancer nucleoside arabinosylcytosine: conformational perturbation by arabinosylcytosine in B-DNA. Biochemistry. 30: 9922-31. PMID 1911784 DOI: 10.1021/BI00105A016  0.512
1991 Roelen HC, Saris CP, Brugghe HF, van den Elst H, Westra JG, van der Marel GA, van Boom JH. Solid-phase synthesis of DNA fragments containing the modified base 7-hydro-8-oxo-2'-deoxyguanosine. Nucleic Acids Research. 19: 4361-9. PMID 1886763 DOI: 10.1093/nar/19.16.4361  0.47
1991 Koning TM, Boelens R, van der Marel GA, van Boom JH, Kaptein R. Structure determination of a DNA octamer in solution by NMR spectroscopy. Effect of fast local motions. Biochemistry. 30: 3787-97. PMID 1849738 DOI: 10.1021/Bi00229A028  0.458
1991 Remerowski ML, Kellenbach E, Boelens R, van der Marel GA, van Boom JH, Maler BA, Yamamoto KR, Kaptein R. 1H NMR studies of DNA recognition by the glucocorticoid receptor: complex of the DNA binding domain with a half-site response element. Biochemistry. 30: 11620-4. PMID 1751485 DOI: 10.1021/Bi00114A003  0.473
1990 Haasnoot CA, Westerink HP, van der Marel GA, van Boom JH. Discrimination between A-type and B-type conformations of double helical nucleic acid fragments in solution by means of two-dimensional nuclear Overhauser experiments. Journal of Biomolecular Structure & Dynamics. 2: 345-60. PMID 6400940 DOI: 10.1080/07391102.1984.10507572  0.778
1990 Haasnoot CA, Westerink HP, van der Marel GA, van Boom JH. Conformational analysis of a hybrid DNA-RNA double helical oligonucleotide in aqueous solution: d(CG)r(CG)d(CG) studied by 1D- and 2D-1H NMR spectroscopy. Journal of Biomolecular Structure & Dynamics. 1: 131-49. PMID 6086057 DOI: 10.1080/07391102.1983.10507430  0.786
1990 Manzini G, Xodo LE, Quadrifoglio F, van Boom JH, van der Marel GA. dC-dG alternating oligonucleotides: thermodynamic and kinetic aspects of the B-Z transformation. Journal of Biomolecular Structure & Dynamics. 4: 651-62. PMID 3271458 DOI: 10.1080/07391102.1987.10507666  0.436
1990 Liaw YC, Gao YG, Robinson H, van der Marel GA, van Boom JH, Wang AH. Antitumor drug nogalamycin binds DNA in both grooves simultaneously: molecular structure of nogalamycin-DNA complex. Biochemistry. 28: 9913-8. PMID 2620066 DOI: 10.1021/BI00452A006  0.477
1990 Robinson H, Liaw YC, van der Marel GA, van Boom JH, Wang AH. NMR studies on the binding of antitumor drug nogalamycin to DNA hexamer d(CGTACG). Nucleic Acids Research. 18: 4851-8. PMID 2395646 DOI: 10.1093/NAR/18.16.4851  0.49
1990 Manzini G, Xodo LE, Gasparotto D, Quadrifoglio F, van der Marel GA, van Boom JH. Triple helix formation by oligopurine-oligopyrimidine DNA fragments. Electrophoretic and thermodynamic behavior. Journal of Molecular Biology. 213: 833-43. PMID 2359124 DOI: 10.1016/S0022-2836(05)80267-0  0.471
1990 Frederick CA, Williams LD, Ughetto G, van der Marel GA, van Boom JH, Rich A, Wang AH. Structural comparison of anticancer drug-DNA complexes: adriamycin and daunomycin. Biochemistry. 29: 2538-49. PMID 2334681 DOI: 10.1021/Bi00462A016  0.482
1990 Aymami J, Coll M, van der Marel GA, van Boom JH, Wang AH, Rich A. Molecular structure of nicked DNA: a substrate for DNA repair enzymes. Proceedings of the National Academy of Sciences of the United States of America. 87: 2526-30. PMID 2320572 DOI: 10.1073/Pnas.87.7.2526  0.486
1990 Williams LD, Egli M, Qi G, Bash P, van der Marel GA, van Boom JH, Rich A, Frederick CA. Structure of nogalamycin bound to a DNA hexamer. Proceedings of the National Academy of Sciences of the United States of America. 87: 2225-9. PMID 2315315 DOI: 10.1073/Pnas.87.6.2225  0.486
1990 Lamerichs RM, Boelens R, Van der Marel GA, Van Boom JH, Kaptein R. Assignment of the 1H-NMR spectrum of a lac repressor headpiece-operator complex in H2O and identification of NOEs. Consequences for protein-DNA interaction. European Journal of Biochemistry / Febs. 194: 629-37. PMID 2269288 DOI: 10.1111/J.1432-1033.1990.Tb15662.X  0.459
1990 Blommers MJ, Slot HJ, van der Marel GA, van Boom JH, Hilbers CW. Conformational analysis of the 3'-5'-cyclic dinucleotide d less than pApA greater than by means of molecular mechanics. Journal of Biomolecular Structure & Dynamics. 8: 233-51. PMID 2176505 DOI: 10.1080/07391102.1990.10507804  0.479
1990 Liaw YC, Gao YG, Robinson H, Sheldrick GM, Sliedregt LA, van der Marel GA, van Boom JH, Wang AH. Cyclic diguanylic acid behaves as a host molecule for planar intercalators. Febs Letters. 264: 223-7. PMID 2162785 DOI: 10.1016/0014-5793(90)80253-F  0.469
1990 Pieters JM, de Vroom E, van der Marel GA, van Boom JH, Koning TM, Kaptein R, Altona C. Hairpin structures in DNA containing arabinofuranosylcytosine. A combination of nuclear magnetic resonance and molecular dynamics. Biochemistry. 29: 788-99. PMID 2159791 DOI: 10.1021/Bi00455A029  0.47
1990 Egli M, Gessner RV, Williams LD, Quigley GJ, van der Marel GA, van Boom JH, Rich A, Frederick CA. Atomic-resolution structure of the cellulose synthase regulator cyclic diguanylic acid. Proceedings of the National Academy of Sciences of the United States of America. 87: 3235-9. PMID 2158107 DOI: 10.1073/Pnas.87.8.3235  0.437
1990 Williams LD, Egli M, Ughetto G, van der Marel GA, van Boom JH, Quigley GJ, Wang AH, Rich A, Frederick CA. Structure of 11-deoxydaunomycin bound to DNA containing a phosphorothioate. Journal of Molecular Biology. 215: 313-20. PMID 2152325 DOI: 10.1016/S0022-2836(05)80349-3  0.476
1990 Dreef-Tromp CM, van Dam EM, van den Elst H, van der Marel GA, van Boom JH. Solid-phase synthesis of H-Phe-Tyr-(pATAT)-NH2: a nucleopeptide fragment from the nucleoprotein of bacteriophage phi X174. Nucleic Acids Research. 18: 6491-5. PMID 2147473 DOI: 10.1093/nar/18.22.6491  0.43
1990 Noort D, Coughtrie MW, Burchell B, van der Marel GA, van Boom JH, van der Gen A, Mulder GJ. Inhibition of UDP-glucuronosyltransferase activity by possible transition-state analogues in rat-liver microsomes. European Journal of Biochemistry / Febs. 188: 309-12. PMID 2108023 DOI: 10.1111/J.1432-1033.1990.Tb15404.X  0.412
1990 Carter BJ, De Vroom E, Long EC, Van Der Marel GA, Van Boom JH, Hecht SM. Site-specific cleavage of RNA by Fe(II)·bleomycin Proceedings of the National Academy of Sciences of the United States of America. 87: 9373-9377. PMID 1701259 DOI: 10.1073/Pnas.87.23.9373  0.403
1989 Xodo LE, Manzini G, Quadrifoglio F, van der Marel GA, van Boom JH. The B-Z conformational transition in folded oligodeoxynucleotides: loop size and stability of Z-hairpins. Biochemistry. 27: 6327-31. PMID 3219338 DOI: 10.1021/BI00417A019  0.463
1989 Xodo LE, Manzini G, Quadrifoglio F, van der Marel GA, van Boom JH. Oligodeoxynucleotide folding in solution: loop size and stability of B-hairpins. Biochemistry. 27: 6321-6. PMID 3219337 DOI: 10.1021/BI00417A018  0.472
1989 Xodo LE, Manzini G, Quadrifoglio F, Yathindra N, van der Marel GA, van Boom JH. A facile duplex-hairpin interconversion through a cruciform intermediate in a linear DNA fragment. Journal of Molecular Biology. 205: 777-81. PMID 2926824 DOI: 10.1016/0022-2836(89)90322-7  0.487
1989 Blommers MJ, Walters JA, Haasnoot CA, Aelen JM, van der Marel GA, van Boom JH, Hilbers CW. Effects of base sequence on the loop folding in DNA hairpins. Biochemistry. 28: 7491-8. PMID 2819083 DOI: 10.1021/BI00444A049  0.77
1989 Wang AH, Cottens S, Dervan PB, Yesinowski JP, van der Marel GA, van Boom JH. Interactions between a symmetrical minor groove binding compound and DNA oligonucleotides: 1H and 19F NMR studies. Journal of Biomolecular Structure & Dynamics. 7: 101-17. PMID 2818866 DOI: 10.1080/07391102.1989.10507754  0.443
1989 Xodo LE, Manzini G, Quadrifoglio F, Yathindra N, van der Marel GA, van Boom JH. The left-handed Z-DNA conformation in oligodeoxynucleotides containing different amounts of AT base pairs: a far UV circular dichroism study. Journal of Biomolecular Structure & Dynamics. 6: 1217-31. PMID 2818863 DOI: 10.1080/07391102.1989.10506546  0.455
1989 Hua N, van der Marel GA, van Boom JH, Feigon J. Non-contiguous regions of Z-DNA in a DNA dodecamer. Nucleic Acids Research. 17: 7923-44. PMID 2798135 DOI: 10.1093/Nar/17.19.7923  0.479
1989 Pieters JM, de Vroom E, van der Marel GA, van Boom JH, Altona C. Conformational consequences of the incorporation of arabinofuranosylcytidine in DNA. An NMR study of the DNA fragments d(CGCTAGCG) and d(CGaCTAGCG) in solution. European Journal of Biochemistry / Febs. 184: 415-25. PMID 2792106 DOI: 10.1111/J.1432-1033.1989.Tb15033.X  0.488
1989 Pieters JM, Mans RM, van den Elst H, van der Marel GA, van Boom JH, Altona C. Conformational and thermodynamic consequences of the introduction of a nick in duplexed DNA fragments: an NMR study augmented by biochemical experiments. Nucleic Acids Research. 17: 4551-65. PMID 2748334 DOI: 10.1093/nar/17.12.4551  0.438
1989 Lamerichs RM, Boelens R, van der Marel GA, van Boom JH, Kaptein R, Buck F, Fera B, Rüterjans H. H NMR study of a complex between the lac repressor headpiece and a 22 base pair symmetric lac operator. Biochemistry. 28: 2985-91. PMID 2742823 DOI: 10.1021/Bi00433A037  0.445
1989 Kuyl-Yeheskiely E, Dreef-Tromp CM, Geluk A, van der Marel GA, van Boom JH. Synthesis of the nucleopeptides H-Phe-Tyr(pGC)-NH2 and H-Phe-Ser(pGC)-Ala-OH via a phosphotriester approach. Nucleic Acids Research. 17: 2897-905. PMID 2726447 DOI: 10.1093/nar/17.8.2897  0.453
1989 Gilbert DE, van der Marel GA, van Boom JH, Feigon J. Unstable Hoogsteen base pairs adjacent to echinomycin binding sites within a DNA duplex. Proceedings of the National Academy of Sciences of the United States of America. 86: 3006-10. PMID 2717609 DOI: 10.1073/Pnas.86.9.3006  0.495
1989 Frederick CA, Quigley GJ, Teng MK, Coll M, Van der Marel GA, Van Boom JH, Rich A, Wang AH. Molecular structure of an A-DNA decamer d(ACCGGCCGGT). European Journal of Biochemistry / Febs. 181: 295-307. PMID 2714286 DOI: 10.1111/J.1432-1033.1989.Tb14724.X  0.484
1989 Pieters JM, Mellema JR, van den Elst H, van der Marel GA, van Boom JH, Altona C. Thermodynamics of the various forms of the dodecamer d(ATTACCGGTAAT) and of its constituent hexamers from proton nmr chemical shifts and UV melting curves: three-state and four-state thermodynamic models. Biopolymers. 28: 717-40. PMID 2706311 DOI: 10.1002/bip.360280304  0.474
1989 Benevides JM, Wang AH, van der Marel GA, van Boom JH, Thomas GJ. Effect of the G.T mismatch on backbone and sugar conformations of Z-DNA and B-DNA: analysis by Raman spectroscopy of crystal and solution structures of d(CGCGTG) and d(CGCGCG). Biochemistry. 28: 304-10. PMID 2706254 DOI: 10.1021/BI00427A041  0.482
1989 Boons GJ, Overhand M, van der Marel GA, van Boom JH. Synthesis of a trisaccharide of the inner core region of Citrobacter PCM 187 lipopolysaccharide that contains L-glycero-alpha-D-manno-heptopyranosyl units. Carbohydrate Research. 192: C1-4. PMID 2611773 DOI: 10.1016/0008-6215(89)85198-5  0.55
1989 Coll M, Aymami J, van der Marel GA, van Boom JH, Rich A, Wang AH. Molecular structure of the netropsin-d(CGCGATATCGCG) complex: DNA conformation in an alternating AT segment. Biochemistry. 28: 310-20. PMID 2539859 DOI: 10.1021/Bi00427A042  0.486
1989 Xodo LE, Manzini G, Quadrifoglio F, van der Marel G, van Boom JH. Hairpin structures in synthetic oligodeoxynucleotides: sequence effects on the duplex-to-hairpin transition. Biochimie. 71: 793-803. PMID 2505860 DOI: 10.1016/0300-9084(89)90042-4  0.485
1989 Tomita K, Hakoshima T, Inubushi K, Kunisawa S, Ohishi H, van der Marel GA, van Boom JH, Wang AH, Rich A. Polyamine interaction with Z-DNA. Journal of Molecular Graphics. 7: 71-5. PMID 2488266 DOI: 10.1016/S0263-7855(89)80002-5  0.443
1989 Carrondo MA, Coll M, Aymami J, Wang AH, van der Marel GA, van Boom JH, Rich A. Binding of a Hoechst dye to d(CGCGATATCGCG) and its influence on the conformation of the DNA fragment. Biochemistry. 28: 7849-59. PMID 2482071 DOI: 10.1021/Bi00445A047  0.486
1989 Teng MK, Liaw YC, van der Marel GA, van Boom JH, Wang AH. Effects of the O2' hydroxyl group on Z-DNA conformation: structure of Z-RNA and (araC)-[Z-DNA]. Biochemistry. 28: 4923-8. PMID 2475172 DOI: 10.1021/BI00438A001  0.507
1988 Roelen HC, de Vroom E, van der Marel GA, van Boom JH. Synthesis of nucleic acid methylphosphonothioates. Nucleic Acids Research. 16: 7633-45. PMID 3412896 DOI: 10.1093/nar/16.15.7633  0.464
1988 van den Hoogen YT, van Beuzekom AA, de Vroom E, van der Marel GA, van Boom JH, Altona C. Bulge-out structures in the single-stranded trimer AUA and in the duplex (CUGGUGCGG).(CCGCCCAG). A model-building and NMR study. Nucleic Acids Research. 16: 5013-30. PMID 3387215 DOI: 10.1093/nar/16.11.5013  0.456
1988 de Vroom E, Broxterman HJ, Sliedregt LA, van der Marel GA, van Boom JH. Synthesis of cyclic oligonucleotides by a modified phosphotriester approach. Nucleic Acids Research. 16: 4607-20. PMID 3380690 DOI: 10.1093/nar/16.10.4607  0.439
1988 van den Hoogen YT, van Beuzekom AA, van den Elst H, van der Marel GA, van Boom JH, Altona C. Extra thymidine stacks into the d(CTGGTGCGG).d(CCGCCCAG) duplex. An NMR and model-building study. Nucleic Acids Research. 16: 2971-86. PMID 3368313 DOI: 10.1093/nar/16.7.2971  0.482
1988 Benevides JM, Wang AH, van der Marel GA, van Boom JH, Thomas GJ. Crystal and solution structures of the B-DNA dodecamer d(CGCAAATTTGCG) probed by Raman spectroscopy: heterogeneity in the crystal structure does not persist in the solution structure. Biochemistry. 27: 931-8. PMID 3365372 DOI: 10.1021/BI00403A014  0.463
1988 Kemmink J, Eker APM, van der Marel GA, van Boom JH, Kaptein R. Photoreactivation of the thymine dimer containing DNA octamer d(GCGT TGCG)·d(CGCAACGC) by the photoreactivating enzyme from Anacystis nidulans Journal of Photochemistry and Photobiology, B: Biology. 1: 323-328. PMID 3149667 DOI: 10.1016/1011-1344(88)85020-6  0.473
1988 van den Hoogen YT, Treurniet SJ, Roelen HC, de Vroom E, van der Marel GA, van Boom JH, Altona C. Conformational analysis of the tetranucleotides m6(2)A-m6(2)A-U-m6(2)A(m6(2)A = N6-dimethyladenosine) and U-m6(2)A-U-m6(2)A and of the hybrid dA-r(U-A). A one- and two-dimensional NMR study. European Journal of Biochemistry / Febs. 171: 155-62. PMID 3123229 DOI: 10.1111/J.1432-1033.1988.TB13771.X  0.378
1988 Blommers MJ, Haasnoot CA, Walters JA, van der Marel GA, van Boom JH, Hilbers CW. Solution structure of the 3'-5' cyclic dinucleotide d(pApA). A combined NMR, UV melting, and molecular mechanics study. Biochemistry. 27: 8361-9. PMID 2853963 DOI: 10.1021/BI00422A011  0.777
1988 Frederick CA, Coll M, van der Marel GA, van Boom JH, Wang AH. Molecular structure of cyclic deoxydiadenylic acid at atomic resolution. Biochemistry. 27: 8350-61. PMID 2853962 DOI: 10.1021/BI00422A010  0.49
1988 Frederick CA, Quigley GJ, van der Marel GA, van Boom JH, Wang AH, Rich A. Methylation of the EcoRI recognition site does not alter DNA conformation: the crystal structure of d(CGCGAm6ATTCGCG) at 2.0-A resolution. The Journal of Biological Chemistry. 263: 17872-9. PMID 2846582 DOI: 10.2210/Pdb4Dnb/Pdb  0.484
1988 de Vroom E, Roelen HC, Saris CP, Budding TN, van der Marel GA, van Boom JH. Preparation of covalently linked DNA-RNA hybrids and arabinocytidine containing DNA fragments. Nucleic Acids Research. 16: 2987-3003. PMID 2453027 DOI: 10.1093/nar/16.7.2987  0.474
1988 van den Hoogen YT, Erkelens C, de Vroom E, van der Marel GA, van Boom JH, Altona C. Influence of uracil on the conformational behaviour of RNA oligonucleotides in solution. European Journal of Biochemistry / Febs. 173: 295-303. PMID 2452087 DOI: 10.1111/J.1432-1033.1988.Tb13998.X  0.498
1988 Sugiyama H, Xu C, Murugesan N, Hecht SM, van der Marel GA, van Boom JH. Chemistry of the alkali-labile lesion formed from iron(II) bleomycin and d(CGCTTTAAAGCG). Biochemistry. 27: 58-67. PMID 2450572 DOI: 10.1021/Bi00401A011  0.448
1987 de Vroom E, Fidder A, Saris CP, van der Marel GA, van Boom JH. Preparation of the individual diastereomers of adenylyl-(2'-5')-P-thioadenylyl-(2'-5')-adenosine and their 5'-phosphorylated derivatives. Nucleic Acids Research. 15: 9933-43. PMID 3697086 DOI: 10.1093/nar/15.23.9933  0.375
1987 Orbons LP, van der Marel GA, van Boom JH, Altona C. An NMR study of polymorphous behaviour of the mismatched DNA octamer d(m5C-G-m5C-G-A-G-m5C-G) in solution. The B-duplex and hairpin forms. European Journal of Biochemistry / Febs. 170: 225-39. PMID 3691520 DOI: 10.1111/J.1432-1033.1987.Tb13690.X  0.482
1987 Frederick CA, Saal D, van der Marel GA, van Boom JH, Wang AH, Rich A. The crystal structure of d(GGm5CCGGCC): the effect of methylation on A-DNA structure and stability. Biopolymers. 26: S145-60. PMID 3580495 DOI: 10.1002/bip.360260014  0.488
1987 Orbons LP, van der Marel GA, van Boom JH, Altona C. An NMR study of the polymorphous behavior of the mismatched DNA octamer d(m5C-G-m5C-G-T-G-m5C-G) in solution. The B, Z, and hairpin forms. Journal of Biomolecular Structure & Dynamics. 4: 939-63. PMID 3270540 DOI: 10.1080/07391102.1987.10507691  0.485
1987 Kuyl-Yeheskiely E, Tromp CM, Schaeffer AH, van der Marel GA, van Boom JH. A model study directed towards the preparation of nucleopeptides via H-phosphonate intermediates. Nucleic Acids Research. 15: 1807-18. PMID 3103103 DOI: 10.1093/NAR/15.4.1807  0.472
1987 Rinkel LJ, van der Marel GA, van Boom JH, Altona C. Influence of the base sequence on the conformational behaviour of DNA polynucleotides in solution. European Journal of Biochemistry / Febs. 166: 87-101. PMID 3036527 DOI: 10.1111/J.1432-1033.1987.Tb13487.X  0.493
1987 Kemmink J, Boelens R, Koning T, van der Marel GA, van Boom JH, Kaptein R. 1H NMR study of the exchangeable protons of the duplex d(GCGTTGCG).d(CGCAACGC) containing a thymine photodimer. Nucleic Acids Research. 15: 4645-53. PMID 3035498 DOI: 10.1093/Nar/15.11.4645  0.475
1987 Quignard E, Fazakerley GV, van der Marel G, van Boom JH, Guschlbauer W. Comparison of the conformation of an oligonucleotide containing a central G-T base pair with the non-mismatch sequence by proton NMR. Nucleic Acids Research. 15: 3397-409. PMID 3033602 DOI: 10.1093/NAR/15.8.3397  0.45
1987 Rinkel LJ, van der Marel GA, van Boom JH, Altona C. Influence of N6-methylation of residue A(5) on the conformational behaviour of d(C-C-G-A-A-T-T-C-G-G) in solution studied by 1H-NMR spectroscopy. 2. The hairpin form. European Journal of Biochemistry / Febs. 163: 287-96. PMID 3028801  0.464
1987 Rinkel LJ, van der Marel GA, van Boom JH, Altona C. Influence of N6-methylation of residue A(5) on the conformational behaviour of d(C-C-G-A-A-T-T-C-G-G) in solution studied by 1H-NMR spectroscopy. 1. The duplex form. European Journal of Biochemistry / Febs. 163: 275-86. PMID 3028800 DOI: 10.1111/J.1432-1033.1987.Tb10798.X  0.499
1987 Kemmink J, Boelens R, Koning TM, Kaptein R, van der Marel GA, van Boom JH. Conformational changes in the oligonucleotide duplex d(GCGTTGCG) x d(CGCAACGC) induced by formation of a cis-syn thymine dimer. A two-dimensional NMR study. European Journal of Biochemistry / Febs. 162: 37-43. PMID 3028790 DOI: 10.1111/J.1432-1033.1987.Tb10538.X  0.503
1987 Raap J, Dreef CE, van der Marel GA, van Boom JH, Hilbers CW. Synthesis and proton-NMR studies of oligonucleotides containing an apurinic (AP) site. Journal of Biomolecular Structure & Dynamics. 5: 219-47. PMID 2856028 DOI: 10.1080/07391102.1987.10506391  0.689
1987 Ehrenfeld GM, Shipley JB, Heimbrook DC, Sugiyama H, Long EC, Van Boom JH, Van Der Marel GA, Oppenheimer NJ, Hecht SM. Copper-dependent cleavage of DNA by bleomycin Biochemistry. 26: 931-942. PMID 2436656 DOI: 10.1021/Bi00377A038  0.391
1986 Benevides JM, Wang AH, Rich A, Kyogoku Y, van der Marel GA, van Boom JH, Thomas GJ. Raman spectra of single crystals of r(GCG)d(CGC) and d(CCCCGGGG) as models for A DNA, their structure transitions in aqueous solution, and comparison with double-helical poly(dG).poly(dC). Biochemistry. 25: 41-50. PMID 3954991 DOI: 10.1021/Bi00349A007  0.494
1986 Orbons LP, van der Marel GA, van Boom JH, Altona C. Hairpin and duplex formation of the DNA octamer d(m5C-G-m5C-G-T-G-m5C-G) in solution. An NMR study. Nucleic Acids Research. 14: 4187-96. PMID 3714474 DOI: 10.1093/nar/14.10.4187  0.464
1986 Quigley GJ, Ughetto G, van der Marel GA, van Boom JH, Wang AH, Rich A. Non-Watson-Crick G.C and A.T base pairs in a DNA-antibiotic complex. Science (New York, N.Y.). 232: 1255-8. PMID 3704650 DOI: 10.1126/Science.3704650  0.478
1986 Marugg JE, de Vroom E, Dreef CE, Tromp M, van der Marel GA, van Boom JH. Synthesis of nucleic acid methylphosphonates via the 1-hydroxybenzotriazole phosphotriester approach. Nucleic Acids Research. 14: 2171-85. PMID 3457366 DOI: 10.1093/NAR/14.5.2171  0.467
1986 Coll M, Wang AH, van der Marel GA, van Boom JH, Rich A. Crystal structure of a Z-DNA fragment containing thymine/2-aminoadenine base pairs. Journal of Biomolecular Structure & Dynamics. 4: 157-72. PMID 3271437 DOI: 10.1080/07391102.1986.10506337  0.5
1986 Orbons LP, van der Marel GA, van Boom JH, Altona C. The B and Z forms of the d(m5C-G)3 and d(br5C-G)3 hexamers in solution. A 300-MHz and 500-MHz two-dimensional NMR study. European Journal of Biochemistry / Febs. 160: 131-9. PMID 3021446 DOI: 10.1111/J.1432-1033.1986.Tb09949.X  0.451
1986 Rinkel LJ, Sanderson MR, van der Marel GA, van Boom JH, Altona C. Conformational analysis of the octamer d(G-G-C-C-G-G-C-C) in aqueous solution. A one-dimensional and two-dimensional proton NMR study at 300 MHz and 500 MHz. European Journal of Biochemistry / Febs. 159: 85-93. PMID 3017719 DOI: 10.1111/J.1432-1033.1986.Tb09836.X  0.468
1986 Rinkel LJ, Mellema JR, van der Marel GA, van Boom JH, Altona C. Influence of 2-aminoadenosine, A', on the conformational behaviour of d(T-A'-T-A'). A one-dimensional proton NMR study at 300 MHz and 500 MHz. European Journal of Biochemistry / Febs. 154: 259-65. PMID 3002796 DOI: 10.1111/J.1432-1033.1986.Tb09391.X  0.48
1986 Haasnoot CA, Hilbers CW, van der Marel GA, van Boom JH, Singh UC, Pattabiraman N, Kollman PA. On loop folding in nucleic acid hairpin-type structures. Journal of Biomolecular Structure & Dynamics. 3: 843-57. PMID 2482747 DOI: 10.1080/07391102.1986.10508468  0.775
1986 de Vroom E, Fidder A, Marugg JE, van der Marel GA, van Boom JH. Use of a 1-hydroxybenzotriazole activated phosphorylating reagent towards the synthesis of short RNA fragments in solution. Nucleic Acids Research. 14: 5885-900. PMID 2426660 DOI: 10.1093/NAR/14.14.5885  0.437
1985 Fazakerley GV, van der Marel GA, van Boom JH, Guschlbauer W. Helix opening in deoxyribonucleic acid from a proton nuclear magnetic resonance study of imino and amino protons in d(CG)3. Nucleic Acids Research. 12: 8269-79. PMID 6504700 DOI: 10.1093/NAR/12.21.8269  0.469
1985 Hilbers CW, Haasnoot CAG, de Bruin SH, Joordens JJM, Van Der Marel GA, Van Boom JH. Hairpin formation in synthetic oligonucleotides Biochimie. 67: 685-695. PMID 4084598 DOI: 10.1016/S0300-9084(85)80156-5  0.496
1985 Schattenkerk C, Wreesmann CT, van der Marel GA, van Boom JH. Synthesis of riboguanosine pentaphosphate ppprGpp (Magic Spot II) via a phosphotriester approach. Nucleic Acids Research. 13: 3635-49. PMID 4011437 DOI: 10.1093/NAR/13.10.3635  0.396
1985 Ughetto G, Wang AH, Quigley GJ, van der Marel GA, van Boom JH, Rich A. A comparison of the structure of echinomycin and triostin A complexed to a DNA fragment. Nucleic Acids Research. 13: 2305-23. PMID 4000957 DOI: 10.1093/Nar/13.7.2305  0.485
1985 Lankhorst PP, Haasnoot CA, Erkelens C, Westerink HP, van der Marel GA, van Boom JH, Altona C. Carbon-13 NMR in conformational analysis of nucleic acid fragments. 4. The torsion angle distribution about the C3'-O3' bond in DNA constituents. Nucleic Acids Research. 13: 927-42. PMID 4000932 DOI: 10.1093/nar/13.3.927  0.772
1985 Fujii S, Wang AH, Quigley GJ, Westerink H, Van der Marel G, Van Boom JH, Rich A. The octamers d(CGCGCGCG) and d(CGCATGCG) both crystallize as Z-DNA in the same hexagonal lattice. Biopolymers. 24: 243-50. PMID 3986289 DOI: 10.1002/bip.360240118  0.461
1985 Gessner RV, Quigley GJ, Wang AH, van der Marel GA, van Boom JH, Rich A. Structural basis for stabilization of Z-DNA by cobalt hexaammine and magnesium cations. Biochemistry. 24: 237-40. PMID 3978072 DOI: 10.1021/Bi00323A001  0.463
1985 den Hartog JH, Altona C, van Boom JH, van der Marel GA, Haasnoot CA, Reedijk J. cis-diamminedichloroplatinum(II) induced distortion of a single and double stranded deoxydecanucleosidenonaphosphate studied by nuclear magnetic resonance. Journal of Biomolecular Structure & Dynamics. 2: 1137-55. PMID 3916945 DOI: 10.1080/07391102.1985.10507629  0.771
1985 Wang AH, Gessner RV, van der Marel GA, van Boom JH, Rich A. Crystal structure of Z-DNA without an alternating purine-pyrimidine sequence. Proceedings of the National Academy of Sciences of the United States of America. 82: 3611-5. PMID 3858839 DOI: 10.1073/Pnas.82.11.3611  0.487
1985 Lankhorst PP, van der Marel GA, Wille G, van Boom JH, Altona C. Conformational characteristics of the hexanucleoside pentaphosphate AUAUAU: a 2D NMR study at 500 MHz. Nucleic Acids Research. 13: 3317-33. PMID 2987882 DOI: 10.1093/nar/13.9.3317  0.467
1984 Mellema JR, van der Woerd R, van der Marel GA, van Boom JH, Altona C. Proton NMR study and conformational analysis of d(CGT), d(TCG) and d(CGTCG) in aqueous solution. The effect of a dangling thymidine and of a thymidine mismatch on DNA mini-duplexes. Nucleic Acids Research. 12: 5061-78. PMID 6739297 DOI: 10.1093/nar/12.12.5061  0.503
1984 Westerink HP, van der Marel GA, van Boom JH, Haasnoot CA. Conformational analysis of r(CGCGCG) in aqueous solution: an A-type double helical conformation studied by two-dimensional nuclear Overhauser effect spectroscopy. Nucleic Acids Research. 12: 4323-38. PMID 6728679 DOI: 10.1093/NAR/12.10.4323  0.768
1984 Tibanyenda N, De Bruin SH, Haasnoot CA, van der Marel GA, van Boom JH, Hilbers CW. The effect of single base-pair mismatches on the duplex stability of d(T-A-T-T-A-A-T-A-T-C-A-A-G-T-T-G) . d(C-A-A-C-T-T-G-A-T-A-T-T-A-A-T-A) European Journal of Biochemistry. 139: 19-27. PMID 6698006 DOI: 10.1111/J.1432-1033.1984.TB07970.X  0.745
1984 Feigon J, Wang AH, van der Marel GA, Van Boom JH, Rich A. A one- and two-dimensional NMR study of the B to Z transition of (m5dC-dG)3 in methanolic solution. Nucleic Acids Research. 12: 1243-63. PMID 6694910 DOI: 10.1093/Nar/12.2.1243  0.488
1984 Schattenkerk C, Visser GM, van der Marel GA, van Boom JH. Synthesis of ppTppp via phosphotriester intermediates. Nucleic Acids Research. 11: 7545-54. PMID 6647028 DOI: 10.1093/NAR/11.21.7545  0.445
1984 Mellema JR, Pieters JM, van der Marel GA, van Boom JH, Haasnoot CA, Altona C. Sequence-dependent structural variation in single-helical DNA. Proton NMR studies of d(T-A-T-A) and d(A-T-A-T) in aqueous solution. European Journal of Biochemistry / Febs. 143: 285-301. PMID 6547907 DOI: 10.1111/J.1432-1033.1984.Tb08371.X  0.769
1984 Wang AH, Ughetto G, Quigley GJ, Hakoshima T, van der Marel GA, van Boom JH, Rich A. The molecular structure of a DNA-triostin A complex. Science (New York, N.Y.). 225: 1115-21. PMID 6474168 DOI: 10.1126/Science.6474168  0.505
1984 Benevides JM, Wang AH, van der Marel GA, van Boom JH, Rich A, Thomas GJ. The Raman spectra of left-handed DNA oligomers incorporating adenine-thymine base pairs+. Nucleic Acids Research. 12: 5913-25. PMID 6462921 DOI: 10.1093/Nar/12.14.5913  0.465
1984 Wreesmann CT, Fidder A, van der Marel GA, van Boom JH. Synthesis of short RNA fragments by the benzotriazolyl phosphotriester approach. Nucleic Acids Research. 11: 8389-405. PMID 6200828 DOI: 10.1093/NAR/11.23.8389  0.443
1983 Fujii S, Wang AH, van der Marel G, van Boom JH, Rich A. Molecular structure of (m5 dC-dG)3: the role of the methyl group on 5-methyl cytosine in stabilizing Z-DNA. Nucleic Acids Research. 10: 7879-92. PMID 7155900 DOI: 10.1093/NAR/10.23.7879  0.476
1983 Sanderson MR, Mellema JR, van der Marel GA, Wille G, van Boom JH, Altona C. Assignment of non-exchangeable base proton and H1' resonances of a deoxyoctanucleoside heptaphosphate d(G-G-C*-C*-G-G-C-C) by using the nuclear Overhauser effect. Nucleic Acids Research. 11: 3333-46. PMID 6856458 DOI: 10.1093/nar/11.10.3333  0.447
1983 den Hartog JH, Altona C, van Boom JH, Marcelis AT, van der Marel GA, Rinkel LJ, Wille-Hazeleger G, Reedijk J. cis-Platinum induced distortions in DNA. Conformational analysis of d(GpCpG) and cis-pt(NH3)2[d(GpCpG)], studied by 500-MHz NMR. European Journal of Biochemistry / Febs. 134: 485-95. PMID 6684039 DOI: 10.1111/J.1432-1033.1983.Tb07593.X  0.461
1983 Alma NCM, Harmsen BJM, Van Boom JH, Van Der Marel G, Hilbers CW. A 500-MHz proton nuclear magnetic resonance study of the structure and structural alterations of gene-5 protein-oligo(deoxyadenylic acid) complexes Biochemistry. 22: 2104-2115. PMID 6602628 DOI: 10.1021/BI00278A010  0.457
1983 van Boom JH, van der Marel GA, Westerink H, van Boeckel CA, Mellema JR, Altona C, Hilbers CW, Haasnoot CA, de Bruin SH, Berendsen RG. Synthesis and conformational analysis of synthetic DNA fragments. Cold Spring Harbor Symposia On Quantitative Biology. 47: 403-9. PMID 6574853  0.771
1983 Haasnoot CA, de Bruin SH, Berendsen RG, Janssen HG, Binnendijk TJ, Hilbers CW, van der Marel GA, van Boom JH. Structure, kinetics and thermodynamics of DNA hairpin fragments in solution. Journal of Biomolecular Structure & Dynamics. 1: 115-29. PMID 6401107 DOI: 10.1080/07391102.1983.10507429  0.772
1983 Mellema JR, Haasnoot CA, van der Marel GA, Wille G, van Boeckel CA, van Boom JH, Altona C. Proton NMR studies on the covalently linked RNA-DNA hybrid r(GCG)d(TATACGC). Assignment of proton resonances by application of the nuclear Overhauser effect. Nucleic Acids Research. 11: 5717-38. PMID 6193486 DOI: 10.1093/nar/11.16.5717  0.776
1983 Marugg J, McLaughlin L, Piel N, Tromp M, van der Marel G, van Boom J. Polymer supported dna synthesis using hydroxybenzotriazole activated phosphotriester intermediates Tetrahedron Letters. 24: 3989-3992. DOI: 10.1016/S0040-4039(00)88244-1  0.422
1982 van der Marel GA, van Boeckel CA, Wille G, van Boom JH. A general method for the synthesis of 5'-monophosphates of DNA fragments via phosphotriester intermediates. Nucleic Acids Research. 10: 2337-51. PMID 7088712 DOI: 10.1093/NAR/10.7.2337  0.459
1982 Alma NC, Harmsen BJ, van Boom JH, van der Marel G, Hilbers CW. 1H NMR studies of the binding of bacteriophage-M13-encoded gene-5 protein to oligo(deoxyadenylic acid)s of varying length. European Journal of Biochemistry. 122: 319-26. PMID 6977447 DOI: 10.1111/J.1432-1033.1982.TB05883.X  0.432
1981 Wang AJ, Quigley GJ, Kolpak FJ, van der Marel G, van Boom JH, Rich A. Left-handed double helical DNA: variations in the backbone conformation. Science (New York, N.Y.). 211: 171-6. PMID 7444458 DOI: 10.1126/SCIENCE.7444458  0.468
1981 Alma NCM, Harmsen BJM, Hull WE, Van Der Marel G, Van Boom JH, Hilbers CW. Double-resonance experiments at 500 MHz on gene-5 protein and its complex with octadeoxyriboadenylic acid Biochemistry. 20: 4419-4428. PMID 6974567 DOI: 10.1021/BI00518A029  0.474
1981 Quigley GJ, Wang AH, Ughetto G, van der Marel G, van Boom JH, Rich A. Molecular structure of an anticancer drug-DNA complex: daunomycin plus d(CpGpTpApCpG). Proceedings of the National Academy of Sciences of the United States of America. 77: 7204-8. PMID 6938965 DOI: 10.1073/PNAS.77.12.7204  0.496
1981 Alma NCM, Harmsen BJM, Hilbers CW, Van der Marel G, Van Boom JH. 500 MHz 1H NMR study of the role of lysines and arginines in the binding of gene-5 protein to oligoadenylic acids Febs Letters. 135: 15-20. PMID 6797840 DOI: 10.1016/0014-5793(81)80934-9  0.411
1981 Baas PD, Teertstra WR, van Mansfeld AD, Jansz HS, van der Marel GA, Veeneman GH, van Boom JH. Construction of viable and lethal mutations in the origin of bacteriophage 'phi' X174 using synthetic oligodeoxyribonucleotides. Journal of Molecular Biology. 152: 615-39. PMID 6460870 DOI: 10.1016/0022-2836(81)90120-0  0.454
1980 Backendorf C, Overbeek GP, Van Boom JH, Van Der Marel G, Veeneman G, Van Duin J. Role of 16-S RNA in ribosome messenger recognition European Journal of Biochemistry. 110: 599-604. PMID 7002555  0.411
1980 Crawford JL, Kolpak FJ, Wang AH, Quigley GJ, van Boom JH, van der Marel G, Rich A. The tetramer d(CpGpCpG) crystallizes as a left-handed double helix. Proceedings of the National Academy of Sciences of the United States of America. 77: 4016-20. PMID 6933447 DOI: 10.1073/PNAS.77.7.4016  0.445
1980 Baas PD, van Teeffelen HA, Teertstra WR, Jansz HS, Veeneman GH, van der Marel GA, van Boom JH. Restoration of the biological activity of in vitro synthesized phi X DNA by transfection of ung- spheroplasts or dUTPase treatment. Febs Letters. 110: 15-20. PMID 6101560 DOI: 10.1016/0014-5793(80)80012-3  0.422
1977 van Boom JH, Burgers PM, van der Marel G, Verdegaal CH, Wille G. Synthesis of oligonucleotides with sequences identical with or analogous to the 3'-end of 16S ribosomal RNA of Escherichia coli: preparation of A-C-C-U-C-C via the modified phosphotriester method. Nucleic Acids Research. 4: 1047-63. PMID 325524 DOI: 10.1093/NAR/4.4.1047  0.431
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