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Andrea Porras-Alfaro, Ph.D. - Publications

Affiliations: 
2008 University of New Mexico, Albuquerque, NM, United States 
Area:
Microbiology Biology, Ecology Biology, Botany Biology, Soil Science Agriculture
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40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Pinchi-Davila XJ, Vargas-Hernández D, Romero-Jiménez MJ, Jumpponen A, Rudgers JA, Herrera J, Hutchinson M, Dunbar JM, Kuske C, Porras-Alfaro A. , gen. et sp. nov., a new member of Pleosporales from North American Plains, its biogeography and effects on a foundation grass species. Mycologia. 1-19. PMID 37874894 DOI: 10.1080/00275514.2023.2258269  0.448
2022 Romero-Jiménez MJ, Rudgers JA, Jumpponen A, Herrera J, Hutchinson M, Kuske C, Dunbar J, Knapp DG, Kovács GM, Porras-Alfaro A. , sp. nov., a dark septate root-associated fungus in foundation grasses in North American Great Plains. Mycologia. 114: 254-269. PMID 35394886 DOI: 10.1080/00275514.2022.2031780  0.406
2021 Ndinga-Muniania C, Mueller RC, Kuske CR, Porras-Alfaro A. Seasonal variation and potential roles of dark septate fungi in an arid grassland. Mycologia. 1-18. PMID 34686124 DOI: 10.1080/00275514.2021.1965852  0.495
2020 Hamm PS, Mueller RC, Kuske CR, Porras-Alfaro A. Keratinophilic fungi: Specialized fungal communities in a desert ecosystem identified using cultured-based and Illumina sequencing approaches. Microbiological Research. 239: 126530. PMID 32622287 DOI: 10.1016/J.Micres.2020.126530  0.556
2019 Challacombe JF, Hesse CN, Bramer LM, McCue LA, Lipton M, Purvine S, Nicora C, Gallegos-Graves V, Porras-Alfaro A, Kuske CR. Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis. Bmc Genomics. 20: 976. PMID 31830917 DOI: 10.1186/S12864-019-6358-X  0.522
2019 Deaver NR, Hesse C, Kuske CR, Porras-Alfaro A. Presence and distribution of insect-associated and entomopathogenic fungi in a temperate pine forest soil: An integrated approach. Fungal Biology. 123: 864-874. PMID 31733729 DOI: 10.1016/J.Funbio.2019.09.006  0.529
2019 Sandona K, Billingsley Tobias TL, Hutchinson MI, Natvig DO, Porras-Alfaro A. Diversity of thermophilic and thermotolerant fungi in corn grain. Mycologia. 1-11. PMID 31348716 DOI: 10.1080/00275514.2019.1631137  0.745
2019 Hamm PS, Caimi NA, Northup DE, Valdez EW, Buecher DC, Dunlap CA, Labeda DP, Porras-Alfaro A. Streptomyces corynorhini sp. nov., isolated from Townsend's big-eared bats (Corynorhinus townsendii). Antonie Van Leeuwenhoek. PMID 30993571 DOI: 10.1007/S10482-019-01261-Z  0.322
2018 Torres-Cruz TJ, Hesse C, Kuske CR, Porras-Alfaro A. Presence and distribution of heavy metal tolerant fungi in surface soils of a temperate pine forest Applied Soil Ecology. 131: 66-74. DOI: 10.1016/J.Apsoil.2018.08.001  0.533
2017 González-Chávez MDCA, Torres-Cruz TJ, Sánchez SA, Carrillo-González R, Carrillo-López LM, Porras-Alfaro A. Microscopic characterization of orchid mycorrhizal fungi: Scleroderma as a putative novel orchid mycorrhizal fungus of Vanilla in different crop systems. Mycorrhiza. PMID 29177968 DOI: 10.1007/S00572-017-0808-6  0.596
2017 Winter AS, Hathaway JJM, Kimble JC, Buecher DC, Valdez EW, Porras-Alfaro A, Young JM, Read KJH, Northup DE. Skin and fur bacterial diversity and community structure on American southwestern bats: effects of habitat, geography and bat traits. Peerj. 5: e3944. PMID 29093998 DOI: 10.7717/Peerj.3944  0.451
2017 Torres-Cruz TJ, Billingsley Tobias TL, Almatruk M, Hesse CN, Kuske CR, Desirò A, Benucci GMN, Bonito G, Stajich JE, Dunlap C, Arnold AE, Porras-Alfaro A. Bifiguratus adelaidae, gen. et sp. nov., a new member of Mucoromycotina in endophytic and soil-dwelling habitats. Mycologia. 1-16. PMID 28876195 DOI: 10.1080/00275514.2017.1364958  0.489
2017 Dean SL, Tobias TB, Phippen WB, Clayton AW, Gruver J, Porras-Alfaro A. A study of Glycine max (soybean) fungal communities under different agricultural practices Plant Gene. 11: 8-16. DOI: 10.1016/J.Plgene.2016.11.003  0.565
2017 Billingsley Tobias T, Farrer EC, Rosales A, Sinsabaugh RL, Suding KN, Porras-Alfaro A. Seed-associated fungi in the alpine tundra: Both mutualists and pathogens could impact plant recruitment Fungal Ecology. 30: 10-18. DOI: 10.1016/J.Funeco.2017.08.001  0.533
2016 Hamm PS, Caimi NA, Northup DE, Valdez EW, Buecher DC, Dunlap CA, Labeda DP, Lueschow S, Porras-Alfaro A. Western Bats as a Reservoir of Novel Streptomyces Species with Antifungal Activity. Applied and Environmental Microbiology. PMID 27986729 DOI: 10.1128/Aem.03057-16  0.396
2016 Hibbett D, Abarenkov K, Koljalg U, Opik M, Chai B, Cole JR, Wang Q, Crous PW, Robert VA, Helgason T, Herr J, Kirk P, Lueschow S, O'Donnell K, Nilsson H, ... ... Porras-Alfaro A, et al. Sequence-based classification and identification of Fungi. Mycologia. PMID 27760854 DOI: 10.3852/16-130  0.698
2016 Hesse CN, Torres-Cruz T, Billingsley Tobias TL, Al-Matruk M, Porras-Alfaro A, Kuske CR. Ribosomal RNA gene detection and targeted culture of novel nitrogen-responsive fungal taxa from temperate pine forest soil. Mycologia. PMID 27621290 DOI: 10.3852/16-086  0.503
2015 Deshpande V, Wang Q, Greenfield P, Charleston M, Porras-Alfaro A, Kuske CR, Cole JR, Midgley DJ, Tran-Dinh N. Fungal identification using a Bayesian classifier and the Warcup training set of internal transcribed spacer sequences. Mycologia. PMID 26553774 DOI: 10.3852/14-293  0.462
2015 Dean SL, Warnok DD, Porras-Alfaro A, Litvak ME, Sinsabaugh R. Root associated fungal community response to drought-associated changes in vegetation community. Mycologia. PMID 26297776 DOI: 10.3852/14-240  0.61
2015 Bolaños J, De León LF, Ochoa E, Darias J, Raja HA, Shearer CA, Miller AN, Vanderheyden P, Porras-Alfaro A, Caballero-George C. Phylogenetic Diversity of Sponge-Associated Fungi from the Caribbean and the Pacific of Panama and Their In Vitro Effect on Angiotensin and Endothelin Receptors. Marine Biotechnology (New York, N.Y.). PMID 26026948 DOI: 10.1007/S10126-015-9634-Z  0.419
2015 Dean SL, Farrer EC, Porras-Alfaro A, Suding KN, Sinsabaugh RL. Assembly of root-associated bacteria communities: interactions between abiotic and biotic factors. Environmental Microbiology Reports. 7: 102-10. PMID 25870878 DOI: 10.1111/1758-2229.12194  0.356
2014 Cole JR, Wang Q, Fish JA, Chai B, McGarrell DM, Sun Y, Brown CT, Porras-Alfaro A, Kuske CR, Tiedje JM. Ribosomal Database Project: data and tools for high throughput rRNA analysis. Nucleic Acids Research. 42: D633-42. PMID 24288368 DOI: 10.1093/Nar/Gkt1244  0.401
2014 Porras-Alfaro A, Liu KL, Kuske CR, Xie G. From genus to phylum: large-subunit and internal transcribed spacer rRNA operon regions show similar classification accuracies influenced by database composition. Applied and Environmental Microbiology. 80: 829-40. PMID 24242255 DOI: 10.1128/Aem.02894-13  0.328
2014 Dean SL, Farrer EC, Taylor DL, Porras-Alfaro A, Suding KN, Sinsabaugh RL. Nitrogen deposition alters plant-fungal relationships: linking belowground dynamics to aboveground vegetation change. Molecular Ecology. 23: 1364-78. PMID 24112704 DOI: 10.1111/Mec.12541  0.374
2014 Porras-Alfaro A, Raghavan S, Garcia M, Sinsabaugh RL, Natvig DO, Lowrey TK. Endophytic fungal symbionts associated with gypsophilous plants1 Botany. 92: 295-301. DOI: 10.1139/Cjb-2013-0178  0.766
2013 Bates ST, Ahrendt S, Bik HM, Bruns TD, Caporaso JG, Cole J, Dwan M, Fierer N, Gu D, Houston S, Knight R, Leff J, Lewis C, Maestre JP, McDonald D, ... ... Porras-Alfaro A, et al. Meeting report: fungal its workshop (october 2012). Standards in Genomic Sciences. 8: 118-23. PMID 23961317 DOI: 10.4056/Sigs.3737409  0.329
2013 Johnson LJ, Miller AN, McCleery RA, McClanahan R, Kath JA, Lueschow S, Porras-Alfaro A. Psychrophilic and psychrotolerant fungi on bats and the presence of Geomyces spp. on bat wings prior to the arrival of white nose syndrome. Applied and Environmental Microbiology. 79: 5465-71. PMID 23811520 DOI: 10.1128/Aem.01429-13  0.446
2012 Weber CF, Balasch MM, Gossage Z, Porras-Alfaro A, Kuske CR. Soil fungal cellobiohydrolase I gene (cbhI) composition and expression in a loblolly pine plantation under conditions of elevated atmospheric CO2 and nitrogen fertilization. Applied and Environmental Microbiology. 78: 3950-7. PMID 22467503 DOI: 10.1128/Aem.08018-11  0.437
2012 Liu KL, Porras-Alfaro A, Kuske CR, Eichorst SA, Xie G. Accurate, rapid taxonomic classification of fungal large-subunit rRNA genes. Applied and Environmental Microbiology. 78: 1523-33. PMID 22194300 DOI: 10.1128/Aem.06826-11  0.392
2012 Parchert KJ, Spilde MN, Porras-Alfaro A, Nyberg AM, Northup DE. Fungal Communities Associated with Rock Varnish in Black Canyon, New Mexico: Casual Inhabitants or Essential Partners? Geomicrobiology Journal. 29: 752-766. DOI: 10.1080/01490451.2011.619636  0.352
2011 Porras-Alfaro A, Herrera J, Natvig DO, Lipinski K, Sinsabaugh RL. Diversity and distribution of soil fungal communities in a semiarid grassland. Mycologia. 103: 10-21. PMID 20943560 DOI: 10.3852/09-297  0.769
2011 Porras-Alfaro A, Bayman P. Hidden fungi, emergent properties: endophytes and microbiomes. Annual Review of Phytopathology. 49: 291-315. PMID 19400639 DOI: 10.1146/Annurev-Phyto-080508-081831  0.483
2010 Herrera J, Khidir HH, Eudy DM, Porras-Alfaro A, Natvig DO, Sinsabaugh RL. Shifting fungal endophyte communities colonize Bouteloua gracilis: effect of host tissue and geographical distribution. Mycologia. 102: 1012-26. PMID 20943502 DOI: 10.3852/09-264  0.763
2010 Khidir HH, Eudy DM, Porras-Alfaro A, Herrera J, Natvig DO, Sinsabaugh RL. A general suite of fungal endophytes dominate the roots of two dominant grasses in a semiarid grassland Journal of Arid Environments. 74: 35-42. DOI: 10.1016/J.Jaridenv.2009.07.014  0.79
2009 Hutchinson MI, Belnap J, Herrera J, Sinsabaugh R, Porras-Alfaro A. Root-associated fungal communities colonizing two dominant semiarid grasses: Hilaria sp. and Stipa sp. Nature Precedings. 1-1. DOI: 10.1038/Npre.2009.3679.1  0.568
2009 Gallo ME, Porras-Alfaro A, Odenbach KJ, Sinsabaugh RL. Photoacceleration of plant litter decomposition in an arid environment Soil Biology and Biochemistry. 41: 1433-1441. DOI: 10.1016/J.Soilbio.2009.03.025  0.486
2008 Bruns TD, Blackwell M, Edwards I, Taylor AFS, Horton T, Zhang N, Kõljalg U, May G, Kuyper TW, Bever JD, Gilbert G, Taylor JW, DeSantis TZ, Pringle A, Borneman J, ... ... Porras-Alfaro A, et al. Preserving accuracy in GenBank Science. 319: 1616. PMID 18356505 DOI: 10.1126/Science.319.5870.1616A  0.63
2008 Porras-Alfaro A, Herrera J, Sinsabaugh RL, Odenbach KJ, Lowrey T, Natvig DO. Novel root fungal consortium associated with a dominant desert grass. Applied and Environmental Microbiology. 74: 2805-13. PMID 18344349 DOI: 10.1128/Aem.02769-07  0.788
2007 Porras-Alfaro A, Bayman P. Mycorrhizal fungi of Vanilla: diversity, specificity and effects on seed germination and plant growth. Mycologia. 99: 510-25. PMID 18065002 DOI: 10.3852/Mycologia.99.4.510  0.531
2007 Porras-Alfaro A, Herrera J, Natvig DO, Sinsabaugh RL. Effect of long-term nitrogen fertilization on mycorrhizal fungi associated with a dominant grass in a semiarid grassland Plant and Soil. 296: 65-75. DOI: 10.1007/S11104-007-9290-9  0.76
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