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Supriyo Bhattacharya, Ph.D. - Publications

Affiliations: 
2006 North Carolina State University, Raleigh, NC 
Area:
Chemical Engineering
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43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Tautermann CS, Binder F, Büttner FH, Eickmeier C, Fiegen D, Gross U, Grundl MA, Heilker R, Hobson S, Hoerer S, Luippold A, Mack V, Montel F, Peters S, Bhattacharya S, et al. Allosteric Activation of Striatal-Enriched Protein Tyrosine Phosphatase (STEP, PTPN5) by a Fragment-like Molecule. Journal of Medicinal Chemistry. PMID 30207464 DOI: 10.1021/Acs.Jmedchem.8B00857  0.348
2018 Nivedha A, Tautermann C, Bhattacharya S, Lee S, Casarosa P, Kollak I, Kiechle T, Vaidehi N. Identifying Functional Hotspot Residues for Biased Ligand Design in G-protein-coupled Receptors. Molecular Pharmacology. PMID 29367258 DOI: 10.1124/Mol.117.110395  0.374
2017 Bhattacharya S, Vaidehi N. Mechanism of Allosteric Communication in GPCR Activation from Microsecond Scale Molecular Dynamics Simulations Biophysical Journal. 112. DOI: 10.1016/J.Bpj.2016.11.2697  0.393
2016 Krumm BE, Lee S, Bhattacharya S, Botos I, White CF, Du H, Vaidehi N, Grisshammer R. Structure and dynamics of a constitutively active neurotensin receptor. Scientific Reports. 6: 38564. PMID 27924846 DOI: 10.1038/Srep38564  0.423
2016 Lee S, Mao A, Bhattacharya S, Robertson N, Grisshammer R, Tate CG, Vaidehi N. How do short chain non-ionic detergents destabilize GPCRs? Journal of the American Chemical Society. PMID 27792324 DOI: 10.1021/Jacs.6B08742  0.404
2016 Bhattacharya S, Salomon-Ferrer R, Lee S, Vaidehi N. Conserved mechanism of conformational stability and dynamics in G-protein-coupled receptors. Journal of Chemical Theory and Computation. PMID 27709935 DOI: 10.1021/Acs.Jctc.6B00618  0.409
2016 Vaidehi N, Bhattacharya S. Allosteric communication pipelines in G-protein-coupled receptors. Current Opinion in Pharmacology. 30: 76-83. PMID 27497048 DOI: 10.1016/J.Coph.2016.07.010  0.327
2016 Vaidehi N, Lee S, Bhattacharya S, Sandhu M, Grisshammer R, Tate CG. Insights into How Mutations Thermostabilize G-Protein-Coupled Receptors Biophysical Journal. 110: 39. DOI: 10.1016/J.Bpj.2015.11.281  0.416
2016 Lee S, Bhattacharya S, Mao A, Grisshammer R, Tate C, Vaidehi N. Insights into the Stability of GPCRs in Detergent Micelles Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.1265  0.412
2016 Bhattacharya S, Grisshammer R, Vaidehi N. Atomic Level Insights into the Activation Mechanism of Neurotensin Receptor 1 Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.124  0.404
2015 Soto AG, Smith TH, Chen B, Bhattacharya S, Cordova IC, Kenakin T, Vaidehi N, Trejo J. N-linked glycosylation of protease-activated receptor-1 at extracellular loop 2 regulates G-protein signaling bias. Proceedings of the National Academy of Sciences of the United States of America. PMID 26100877 DOI: 10.1073/Pnas.1508838112  0.348
2015 Lee S, Bhattacharya S, Tate CG, Grisshammer R, Vaidehi N. Structural dynamics and thermostabilization of neurotensin receptor 1. The Journal of Physical Chemistry. B. 119: 4917-28. PMID 25807267 DOI: 10.1021/Jp510735F  0.363
2015 Bhattacharya S, Kasam V, Li H, Vaidehi N. Identifying Transient Binding Pockets in Protein Dynamics for Allosteric Drug Design Biophysical Journal. 108: 3-9. DOI: 10.1016/J.Bpj.2014.11.2079  0.314
2014 Bhattacharya S, Lee S, Grisshammer R, Tate CG, Vaidehi N. Rapid Computational Prediction of Thermostabilizing Mutations for G Protein-Coupled Receptors. Journal of Chemical Theory and Computation. 10: 5149-5160. PMID 25400524 DOI: 10.1021/Ct500616V  0.407
2014 Bhattacharya S, Vaidehi N. Differences in allosteric communication pipelines in the inactive and active states of a GPCR. Biophysical Journal. 107: 422-34. PMID 25028884 DOI: 10.1016/J.Bpj.2014.06.015  0.348
2014 Lee S, Bhattacharya S, Grisshammer R, Tate C, Vaidehi N. Dynamic behavior of the active and inactive states of the adenosine A(2A) receptor. The Journal of Physical Chemistry. B. 118: 3355-65. PMID 24579769 DOI: 10.1021/Jp411618H  0.375
2014 Vaidehi N, Bhattacharya S, Larsen AB. Structure and dynamics of G-protein coupled receptors. Advances in Experimental Medicine and Biology. 796: 37-54. PMID 24158800 DOI: 10.1007/978-94-007-7423-0_3  0.422
2014 Lee S, Bhattacharya S, Vaidehi N. Dynamic Behavior of the Active and Inactive State of Adenosine A2A Receptors Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.3906  0.382
2014 Bhattacharya S, Vaidehi N. Mapping Allosteric Communication Pipelines in GPCRs from Microsecond Timescale Molecular Dynamics Simulations Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.3512  0.38
2013 Niesen MJ, Bhattacharya S, Grisshammer R, Tate CG, Vaidehi N. Thermostabilization of the β1-adrenergic receptor correlates with increased entropy of the inactive state. The Journal of Physical Chemistry. B. 117: 7283-91. PMID 23697892 DOI: 10.1021/Jp403207C  0.386
2013 Bhattacharya S, Lam AR, Li H, Balaraman G, Niesen MJ, Vaidehi N. Critical analysis of the successes and failures of homology models of G protein-coupled receptors. Proteins. 81: 729-39. PMID 23042299 DOI: 10.1002/Prot.24195  0.404
2012 Bhattacharya S, Vaidehi N. LITiCon: a discrete conformational sampling computational method for mapping various functionally selective conformational states of transmembrane helical proteins. Methods in Molecular Biology (Clifton, N.J.). 914: 167-78. PMID 22976028 DOI: 10.1007/978-1-62703-023-6_10  0.377
2012 Fowler JC, Bhattacharya S, Urban JD, Vaidehi N, Mailman RB. Receptor conformations involved in dopamine D(2L) receptor functional selectivity induced by selected transmembrane-5 serine mutations. Molecular Pharmacology. 81: 820-31. PMID 22416052 DOI: 10.1124/Mol.111.075457  0.338
2012 Bhattacharya S, Matthew M, Larsen A, Vaidehi N. GPCRTooKit: A Computational Platform for Structural Comparison of GPCR Crystal Structures and Homology Model Refinement Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.2566  0.397
2012 Niesen MJM, Bhattacharya S, Vaidehi N. Conformational Selection and Allosteric Regulation upon Ligand Binding in G-Protein Coupled Receptors Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.1239  0.392
2011 Vaidehi N, Bhattacharya S. Multiscale computational methods for mapping conformational ensembles of G-protein-coupled receptors. Advances in Protein Chemistry and Structural Biology. 85: 253-80. PMID 21920326 DOI: 10.1016/B978-0-12-386485-7.00007-7  0.403
2011 Niesen MJ, Bhattacharya S, Vaidehi N. The role of conformational ensembles in ligand recognition in G-protein coupled receptors. Journal of the American Chemical Society. 133: 13197-204. PMID 21766860 DOI: 10.1021/Ja205313H  0.413
2011 Lam AR, Bhattacharya S, Patel K, Hall SE, Mao A, Vaidehi N. Importance of receptor flexibility in binding of cyclam compounds to the chemokine receptor CXCR4. Journal of Chemical Information and Modeling. 51: 139-47. PMID 21158459 DOI: 10.1021/Ci1003027  0.352
2011 Bhattacharya S, Niesen M, Lam AR, Vaidehi N. Role of water and G Protein in modulating agonist affinity in GPCRs Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.1388  0.412
2010 Balaraman GS, Bhattacharya S, Vaidehi N. Structural insights into conformational stability of wild-type and mutant beta1-adrenergic receptor. Biophysical Journal. 99: 568-77. PMID 20643076 DOI: 10.1016/J.Bpj.2010.04.075  0.327
2010 Bhattacharya S, Subramanian G, Hall S, Lin J, Laoui A, Vaidehi N. Allosteric antagonist binding sites in class B GPCRs: corticotropin receptor 1. Journal of Computer-Aided Molecular Design. 24: 659-74. PMID 20512399 DOI: 10.1007/S10822-010-9364-2  0.355
2010 Bhattacharya S, Vaidehi N. Computational mapping of the conformational transitions in agonist selective pathways of a G-protein coupled receptor. Journal of the American Chemical Society. 132: 5205-14. PMID 20235532 DOI: 10.1021/Ja910700Y  0.411
2010 Bhattacharya S, Vaidehi N. Activation Pathways of Agonists, Partial Agonists and Inverse Agonist in Beta1 and Beta2 Adrenergic Receptors Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.3543  0.388
2010 Bhattacharya S, Vaidehi N. Computational Methods for Mapping Ligand Induced Conformational Changes in GPCRs Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.2500  0.378
2009 Bhattacharya S, Coasne B, Hung FR, Gubbins KE. Modeling micelle-templated mesoporous material SBA-15: atomistic model and gas adsorption studies. Langmuir : the Acs Journal of Surfaces and Colloids. 25: 5802-13. PMID 19099416 DOI: 10.1021/La801560E  0.678
2009 Bhattacharya S, Vaidehi N. Ligand Induced Conformational Changes in GPCRs: Insight Into the Activation of Rhodopsin and β-adrenergic Receptors Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.101  0.389
2008 Bhattacharya S, Hall SE, Vaidehi N. Agonist-induced conformational changes in bovine rhodopsin: insight into activation of G-protein-coupled receptors. Journal of Molecular Biology. 382: 539-55. PMID 18638482 DOI: 10.1016/J.Jmb.2008.06.084  0.398
2008 Bhattacharya S, Hall SE, Li H, Vaidehi N. Ligand-stabilized conformational states of human beta(2) adrenergic receptor: insight into G-protein-coupled receptor activation. Biophysical Journal. 94: 2027-42. PMID 18065472 DOI: 10.1529/Biophysj.107.117648  0.386
2007 Bhattacharya S, Coasne B, Hung FR, Gubbins KE. Modeling Triblock Surfactant Templated Mesoporous Silicas (MCF and SBA-15): A Mimetic Simulation Study Studies in Surface Science and Catalysis. 160: 527-534. DOI: 10.1016/S0167-2991(07)80068-1  0.68
2007 Hung FR, Bhattacharya S, Coasne B, Thommes M, Gubbins KE. Argon and krypton adsorption on templated mesoporous silicas: Molecular simulation and experiment Adsorption. 13: 425-437. DOI: 10.1007/S10450-007-9034-4  0.675
2006 Bhattacharya S, Gubbins KE. Fast method for computing pore size distributions of model materials. Langmuir : the Acs Journal of Surfaces and Colloids. 22: 7726-31. PMID 16922556 DOI: 10.1021/La052651K  0.522
2006 Bhattacharya S, Coasne B, Hung FR, Gubbins KE. Modeling triblock surfactant templated mesoporous silicas (MCF and SBA-15): A mimetic simulation study Studies in Surface Science and Catalysis. 160: 527-534.  0.644
2005 Bhattacharya S, Gubbins KE. Modeling triblock surfactant-templated mesostructured cellular foams. The Journal of Chemical Physics. 123: 134907. PMID 16223331 DOI: 10.1063/1.2013250  0.538
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