| Year |
Citation |
Score |
| 2022 |
Walter V, Choi HY, Zhao X, Gao Y, Holt J, Hayes DN. DiNAMIC.Duo: detecting somatic DNA copy number differences without a normal reference. Bioinformatics (Oxford, England). PMID 35924981 DOI: 10.1093/bioinformatics/btac542 |
0.34 |
|
| 2020 |
Pathak T, Gueguinou M, Walter V, Delierneux C, Johnson MT, Zhang X, Xin P, Yoast RE, Emrich SM, Yochum GR, Sekler I, Koltun WA, Gill DL, Hempel N, Trebak M. Dichotomous role of the human mitochondrial Na/Ca/Li exchanger NCLX in colorectal cancer growth and metastasis. Elife. 9. PMID 32914752 DOI: 10.7554/Elife.59686 |
0.364 |
|
| 2020 |
Song S, Nguyen V, Schrank T, Mulvaney K, Walter V, Wei D, Orvis T, Desai N, Zhang J, Hayes DN, Zheng Y, Major MB, Weissman BE. Loss of SWI/SNF chromatin remodeling alters NRF2 signaling in non-small cell lung carcinoma. Molecular Cancer Research : McR. PMID 32855269 DOI: 10.1158/1541-7786.Mcr-20-0082 |
0.355 |
|
| 2019 |
Lee SY, Walter V, Zhu J, Salzberg AC, Liu DJ, Connor JR. Impact of HFE variants and sex in lung cancer. Plos One. 14: e0226821. PMID 31856248 DOI: 10.1371/Journal.Pone.0226821 |
0.358 |
|
| 2019 |
Osei-Amponsa V, Buckwalter JM, Shuman L, Zheng Z, Yamashita H, Walter V, Wildermuth T, Ellis-Mohl J, Liu C, Warrick JI, Shantz LM, Feehan RP, Al-Ahmadie H, Mendelsohn C, Raman JD, et al. Hypermethylation of FOXA1 and allelic loss of PTEN drive squamous differentiation and promote heterogeneity in bladder cancer. Oncogene. PMID 31636388 DOI: 10.1038/S41388-019-1063-4 |
0.417 |
|
| 2019 |
Buckwalter JM, Chan W, Shuman L, Wildermuth T, Ellis-Mohl J, Walter V, Warrick JI, Wu XR, Kaag M, Raman JD, DeGraff DJ. Characterization of Histone Deacetylase Expression Within In Vitro and In Vivo Bladder Cancer Model Systems. International Journal of Molecular Sciences. 20. PMID 31137849 DOI: 10.3390/Ijms20102599 |
0.358 |
|
| 2019 |
Pool C, Walter V, Bann D, Goldenberg D, Broach J, Hennessy M, Cottrill E, Washburn E, Williams N, Crist H, Imamura Y, Warrick JI. Molecular characterization of tumors meeting diagnostic criteria for the non-invasive follicular thyroid neoplasm with papillary-like nuclear features (NIFTP). Virchows Archiv : An International Journal of Pathology. PMID 30645670 DOI: 10.1007/S00428-018-02512-6 |
0.384 |
|
| 2019 |
Walter V, Du Y, Danilova L, Hayward M, Hayes DN. Abstract 4254: Integrated analysis with MVisAGe identifies concordant and discordant genomic alterations of driver genes Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-4254 |
0.305 |
|
| 2019 |
Shuman* L, Osei-Amponsa V, Buckwalter J, Zheng Z, Yamashita H, Walter V, Ellis J, Lu C, Warrick J, Shantz L, Feehan R, Al-Ahmadie H, Mendelsohn C, Kaestner K, Wu X, et al. MP51-12 INACTIVATION OF FOXA1 COOPERATES WITH PTEN COPY NUMBER LOSS IN BLADDER CANCER TO PROMOTE TUMOR HETEROGENEITY Journal of Urology. 201. DOI: 10.1097/01.Ju.0000556472.61882.0A |
0.395 |
|
| 2019 |
Lee S, Walter V, Salzberg A, Nesterova D, Lathia J, Rubin J, Berens M, Barnholtz-Sloan J, Connor J. EPID-01. SEX DIFFERENCE IN EXPRESSION OF IRON-RELATED GENES AND SURVIVAL IN GLIOBLASTOMA PATIENTS Neuro-Oncology. 21: vi74-vi74. DOI: 10.1093/Neuonc/Noz175.301 |
0.315 |
|
| 2018 |
Worley BL, Kim YS, Mardini J, Zaman R, Leon KE, Vallur PG, Nduwumwami A, Warrick JI, Timmins PF, Kesterson JP, Phaëton R, Lee NY, Walter V, Endres L, Mythreye K, et al. GPx3 supports ovarian cancer progression by manipulating the extracellular redox environment. Redox Biology. PMID 30509602 DOI: 10.1016/J.Redox.2018.11.009 |
0.374 |
|
| 2018 |
Zaleski M, Gogoj A, Walter V, Raman JD, Kaag M, Merrill SB, Drabick J, Joshi M, Holder S, DeGraff DJ, Warrick JI. Mitotic activity in non-invasive papillary urothelial carcinoma: its value in predicting tumor recurrence, and comparison to the contemporary two-tier grading system. Human Pathology. PMID 30359638 DOI: 10.1016/J.Humpath.2018.10.008 |
0.372 |
|
| 2018 |
Warrick JI, Sjödahl G, Kaag M, Raman JD, Merrill S, Shuman L, Chen G, Walter V, DeGraff DJ. Intratumoral Heterogeneity of Bladder Cancer by Molecular Subtypes and Histologic Variants. European Urology. PMID 30266310 DOI: 10.1016/J.Eururo.2018.09.003 |
0.424 |
|
| 2018 |
Zevallos JP, Mazul AL, Walter V, Hayes DN. Gene Expression Subtype Predicts Nodal Metastasis and Survival in Human Papillomavirus-Negative Head and Neck Cancer. The Laryngoscope. PMID 30247749 DOI: 10.1002/Lary.27340 |
0.349 |
|
| 2018 |
Labarge B, Walter V, Lengerich EJ, Crist H, Karamchandani D, Williams N, Goldenberg D, Bann DV, Warrick JI. Evidence of a positive association between malpractice climate and thyroid cancer incidence in the United States. Plos One. 13: e0199862. PMID 30020955 DOI: 10.1371/Journal.Pone.0199862 |
0.307 |
|
| 2018 |
Walter V, Du Y, Danilova L, Hayward MC, Hayes DN. MVisAGe identifies concordant and discordant genomic alterations of driver genes in squamous tumors. Cancer Research. PMID 29700001 DOI: 10.1158/0008-5472.Can-17-3464 |
0.391 |
|
| 2018 |
Campbell JD, Yau C, Bowlby R, Liu Y, Brennan K, Fan H, Taylor AM, Wang C, Walter V, Akbani R, Byers LA, Creighton CJ, Coarfa C, Shih J, Cherniack AD, et al. Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas. Cell Reports. 23: 194-212.e6. PMID 29617660 DOI: 10.1016/J.Celrep.2018.03.063 |
0.366 |
|
| 2018 |
Walter V, Yin X, Wilkerson MD, Cabanski CR, Zhao N, Du Y, Ang MK, Hayward MC, Salazar AH, Hoadley KA, Fritchie K, Sailey CJ, Weissler MC, Shockley WW, Zanation AM, et al. Correction: Molecular Subtypes in Head and Neck Cancer Exhibit Distinct Patterns of Chromosomal Gain and Loss of Canonical Cancer Genes. Plos One. 13: e0194674. PMID 29543916 DOI: 10.1371/Annotation/E9Ad5950-A048-4A44-8E26-D8B07A9D4Bb8 |
0.32 |
|
| 2018 |
George J, Walter V, Peifer M, Alexandrov LB, Seidel D, Leenders F, Maas L, Müller C, Dahmen I, Delhomme TM, Ardin M, Leblay N, Byrnes G, Sun R, De Reynies A, et al. Integrative genomic profiling of large-cell neuroendocrine carcinomas reveals distinct subtypes of high-grade neuroendocrine lung tumors. Nature Communications. 9: 1048. PMID 29535388 DOI: 10.1038/S41467-018-03099-X |
0.398 |
|
| 2018 |
Osei Amponsa V, Zheng Z, Walter V, Warrick J, Mendelsohn C, Kaestner K, Wu X, Raman J, DeGraff D. Novel transgenic knockout model of basal-squamous bladder cancer. Journal of Clinical Oncology. 36: 459-459. DOI: 10.1200/Jco.2018.36.6_Suppl.459 |
0.375 |
|
| 2017 |
Doerr F, George J, Schmitt A, Beleggia F, Rehkämper T, Hermann S, Walter V, Weber JP, Thomas RK, Wittersheim M, Büttner R, Persigehl T, Reinhardt HC. Targeting a non-oncogene addiction to the ATR/CHK1 axis for the treatment of small cell lung cancer. Scientific Reports. 7: 15511. PMID 29138515 DOI: 10.1038/S41598-017-15840-5 |
0.334 |
|
| 2017 |
Robertson AG, Shih J, Yau C, Gibb EA, Oba J, Mungall KL, Hess JM, Uzunangelov V, Walter V, Danilova L, Lichtenberg TM, Kucherlapati M, Kimes PK, Tang M, Penson A, et al. Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma. Cancer Cell. 32: 204-220.e15. PMID 28810145 DOI: 10.1016/J.Ccell.2017.07.003 |
0.344 |
|
| 2017 |
Bailey ST, Smith AM, Kardos J, Wobker SE, Wilson HL, Krishnan B, Saito R, Lee HJ, Zhang J, Eaton SC, Williams LA, Manocha U, Peters DJ, Pan X, Carroll TJ, ... ... Walter V, et al. MYC activation cooperates with Vhl and Ink4a/Arf loss to induce clear cell renal cell carcinoma. Nature Communications. 8: 15770. PMID 28593993 DOI: 10.1038/Ncomms15770 |
0.306 |
|
| 2017 |
Goldenberg D, Russo M, Houser K, Crist H, Derr JB, Walter V, Warrick JI, Sheldon KE, Broach J, Bann DV. Altered molecular profile in thyroid cancers from patients affected by the Three Mile Island nuclear accident. The Laryngoscope. PMID 28555940 DOI: 10.1002/Lary.26687 |
0.302 |
|
| 2017 |
Gezgin G, Dogrusöz M, van Essen TH, Kroes WG, Luyten GP, van der Velden PA, Walter V, Verdijk RM, van Hall T, van der Burg SH, Jager MJ. Genetic evolution of uveal melanoma guides the development of an inflammatory microenvironment. Cancer Immunology, Immunotherapy : Cii. PMID 28391358 DOI: 10.1007/S00262-017-1991-1 |
0.308 |
|
| 2017 |
Cherniack AD, Shen H, Walter V, Stewart C, Murray BA, Bowlby R, Hu X, Ling S, Soslow RA, Broaddus RR, Zuna RE, Robertson G, Laird PW, Kucherlapati R, Mills GB, et al. Integrated Molecular Characterization of Uterine Carcinosarcoma. Cancer Cell. 31: 411-423. PMID 28292439 DOI: 10.1016/J.Ccell.2017.02.010 |
0.399 |
|
| 2017 |
Fishbein L, Leshchiner I, Walter V, Danilova L, Robertson AG, Johnson AR, Lichtenberg TM, Murray BA, Ghayee HK, Else T, Ling S, Jefferys SR, de Cubas AA, Wenz B, Korpershoek E, et al. Comprehensive Molecular Characterization of Pheochromocytoma and Paraganglioma. Cancer Cell. PMID 28162975 DOI: 10.1016/J.Ccell.2017.01.001 |
0.329 |
|
| 2017 |
Mazul A, Zevallos J, Wang L, Walter V, Hayes DN. Gene expression subtypes in early stage oral cavity squamous cell carcinoma and subclinical nodal metastasis. Journal of Clinical Oncology. 35: e17525-e17525. DOI: 10.1200/Jco.2017.35.15_Suppl.E17525 |
0.334 |
|
| 2016 |
Fu J, Sen R, Masica DL, Karchin R, Pardoll D, Walter V, Hayes DN, Chung CH, Kim YJ. Autologous reconstitution of human cancer and immune system in vivo. Oncotarget. PMID 28008146 DOI: 10.18632/Oncotarget.14026 |
0.355 |
|
| 2016 |
Warrick JI, Walter V, Yamashita H, Chung E, Shuman L, Amponsa VO, Zheng Z, Chan W, Whitcomb TL, Yue F, Iyyanki T, Kawasawa YI, Kaag M, Guo W, Raman JD, et al. FOXA1, GATA3 and PPARɣ Cooperate to Drive Luminal Subtype in Bladder Cancer: A Molecular Analysis of Established Human Cell Lines. Scientific Reports. 6: 38531. PMID 27924948 DOI: 10.1038/Srep38531 |
0.366 |
|
| 2016 |
Fishbein L, Leshchiner I, Walter V, Danilova L, Robertson AG, Johnson A, Lichtenberg T, Murray BA, Ghayee HK, Else T, Ling S, Jefferys SR, Cubas AAd, Wenz B, Korpershoek E, et al. Abstract 4371: Integrated molecular characterization of pheochromocytoma and paraganglioma including a novel, recurrent and prognostic fusion gene Cancer Research. 76: 4371-4371. DOI: 10.1158/1538-7445.Am2016-4371 |
0.403 |
|
| 2016 |
George J, Fernandez-Cuesta L, Walter V, Hayes N, Thomas R. Abstract 122: Comparative analysis of small cell lung cancer and other pulmonary neuroendocrine tumors Cancer Research. 76: 122-122. DOI: 10.1158/1538-7445.Am2016-122 |
0.413 |
|
| 2015 |
Zhao X, Wang A, Walter V, Patel NM, Eberhard DA, Hayward MC, Salazar AH, Jo H, Soloway MG, Wilkerson MD, Parker JS, Yin X, Zhang G, Siegel MB, Rosson GB, et al. Combined Targeted DNA Sequencing in Non-Small Cell Lung Cancer (NSCLC) Using UNCseq and NGScopy, and RNA Sequencing Using UNCqeR for the Detection of Genetic Aberrations in NSCLC. Plos One. 10: e0129280. PMID 26076459 DOI: 10.1371/Journal.Pone.0129280 |
0.399 |
|
| 2015 |
Walter V, Du Y, Yin X, Sun W, Wilkerson MD, Hayward MC, Salazar AH, Perou CM, Hayes DN. Abstract 4801: Integrated genomic analysis of chromosome 11 in squamous tumors Cancer Research. 75: 4801-4801. DOI: 10.1158/1538-7445.Am2015-4801 |
0.352 |
|
| 2015 |
Ko YH, Walter V, Catalano M, Yin X, Kimes P, Xiao XX, Hayes DN. Abstract 4007: Integrative analysis of miRNAs classify two distinct stages of epithelial cell differentiation in head and neck squamous cell carcinoma (HNSCC) Cancer Research. 75: 4007-4007. DOI: 10.1158/1538-7445.Am2015-4007 |
0.333 |
|
| 2015 |
Walter V, Wright FA, Nobel AB. Consistent testing for recurrent genomic aberrations Biometrika. 102: 783-796. DOI: 10.1093/Biomet/Asv046 |
0.601 |
|
| 2014 |
Orvis T, Hepperla A, Walter V, Song S, Simon J, Parker J, Wilkerson MD, Desai N, Major MB, Hayes DN, Davis IJ, Weissman B. BRG1/SMARCA4 inactivation promotes non-small cell lung cancer aggressiveness by altering chromatin organization. Cancer Research. 74: 6486-98. PMID 25115300 DOI: 10.1158/0008-5472.Can-14-0061 |
0.376 |
|
| 2014 |
Wilkerson MD, Cabanski CR, Sun W, Hoadley KA, Walter V, Mose LE, Troester MA, Hammerman PS, Parker JS, Perou CM, Hayes DN. Integrated RNA and DNA sequencing improves mutation detection in low purity tumors. Nucleic Acids Research. 42: e107. PMID 24970867 DOI: 10.1093/Nar/Gku489 |
0.359 |
|
| 2014 |
Song S, Walter V, Karaca M, Li Y, Bartlett CS, Smiraglia DJ, Serber D, Sproul CD, Plass C, Zhang J, Hayes DN, Zheng Y, Weissman BE. Gene silencing associated with SWI/SNF complex loss during NSCLC development. Molecular Cancer Research : McR. 12: 560-70. PMID 24445599 DOI: 10.1158/1541-7786.Mcr-13-0427 |
0.375 |
|
| 2014 |
Huang L, Walter V, Hayes DN, Onaitis M. Hedgehog-GLI signaling inhibition suppresses tumor growth in squamous lung cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 20: 1566-75. PMID 24423612 DOI: 10.1158/1078-0432.Ccr-13-2195 |
0.336 |
|
| 2014 |
Hast BE, Cloer EW, Goldfarb D, Li H, Siesser PF, Yan F, Walter V, Zheng N, Hayes DN, Major MB. Cancer-derived mutations in KEAP1 impair NRF2 degradation but not ubiquitination. Cancer Research. 74: 808-17. PMID 24322982 DOI: 10.1158/0008-5472.Can-13-1655 |
0.307 |
|
| 2014 |
Walter V, Du Y, Yin X, Sun W, Wilkerson MD, Hayward MC, Salazar AH, Perou CM, Hayes DN. Abstract 5334: Integrated analysis of squamous tumors identifies novel targets and dissects gene regulation Cancer Research. 74: 5334-5334. DOI: 10.1158/1538-7445.Am2014-5334 |
0.417 |
|
| 2014 |
Huang L, Walter V, Hayes N, Onaitis M. Abstract A25: GLI inhibition as a new strategy to treat lung squamous cell carcinoma. Clinical Cancer Research. 20: A25-A25. DOI: 10.1158/1078-0432.14Aacriaslc-A25 |
0.37 |
|
| 2013 |
Walter V, Yin X, Wilkerson MD, Cabanski CR, Zhao N, Du Y, Ang MK, Hayward MC, Salazar AH, Hoadley KA, Fritchie K, Sailey CJ, Sailey CG, Weissler MC, Shockley WW, et al. Molecular subtypes in head and neck cancer exhibit distinct patterns of chromosomal gain and loss of canonical cancer genes. Plos One. 8: e56823. PMID 23451093 DOI: 10.1371/Journal.Pone.0056823 |
0.373 |
|
| 2013 |
Walter V, Yin X, Wilkerson MD, Cabanski CR, Zhao N, Du Y, Ang MK, Hayward MC, Salazar AH, Hoadley KA, Fritchie K, Sailey CJ, Weissler MC, Shockley WW, Zanation AM, et al. Erratum: Molecular subtypes in head and neck cancer exhibit distinct patterns of chromosomal gain and loss of canonical cancer genes (PLoS ONE (2013) 8:7 DOI:10.1371/annotation/b42f61c5-cb7e-49ca-8cd6-6e1f7903ad08) Plos One. 8. DOI: 10.1371/Annotation/B42F61C5-Cb7E-49Ca-8Cd6-6E1F7903Ad08 |
0.32 |
|
| 2013 |
Huang L, Walter V, Hayes N, Onaitis M. Abstract B236: Inhibition of Hedgehog-GLI signaling suppresses tumor growth in squamous lung cancer. Molecular Cancer Therapeutics. 12. DOI: 10.1158/1535-7163.Targ-13-B236 |
0.381 |
|
| 2013 |
Walter V, Nobel AB, Hayes DN, Wright FA. Identification of Recurrent DNA Copy Number Aberrations in Tumors Statistical Diagnostics For Cancer: Analyzing High-Dimensional Data. 3: 239-260. DOI: 10.1002/9783527665471.ch13 |
0.608 |
|
| 2012 |
Wilkerson MD, Yin X, Walter V, Zhao N, Cabanski CR, Hayward MC, Miller CR, Socinski MA, Parsons AM, Thorne LB, Haithcock BE, Veeramachaneni NK, Funkhouser WK, Randell SH, Bernard PS, et al. Differential pathogenesis of lung adenocarcinoma subtypes involving sequence mutations, copy number, chromosomal instability, and methylation. Plos One. 7: e36530. PMID 22590557 DOI: 10.1371/Journal.Pone.0036530 |
0.398 |
|
| 2012 |
Walter V, Wilkerson M, Cabanski C, Du Y, Hayward M, Hill A, Zhao N, Yin X, Hayes N. Abstract 5083: Analysis of head and neck cancer reveals recurrent copy number aberrations and molecular subtypes exhibiting distinct expression patterns of known oncogenes in the chr3q amplicon Cancer Research. 72: 5083-5083. DOI: 10.1158/1538-7445.Am2012-5083 |
0.427 |
|
| 2011 |
Walter V, Nobel AB, Wright FA. DiNAMIC: a method to identify recurrent DNA copy number aberrations in tumors. Bioinformatics (Oxford, England). 27: 678-85. PMID 21183584 DOI: 10.1093/Bioinformatics/Btq717 |
0.63 |
|
| 2011 |
Walter V, Wilkerson M, Du Y, Soloway M, Hayward M, Hill A, Cabanski C, Yin X, Zhao N, Hayes DN. Abstract 3939: Integrated genomic analysis of head and neck tumors reveals focal high-level copy number gains in chr11q13 are associated with increased expression of known regional oncogenes Cancer Research. 71: 3939-3939. DOI: 10.1158/1538-7445.Am2011-3939 |
0.405 |
|
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