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Peder Lund - Publications

Affiliations: 
2016- University of Pennsylvania School of Medicine, Philadelphia, PA, United States 
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21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Lopes M, Lund PJ, Garcia BA. An optimized and robust workflow for quantifying the canonical histone ubiquitination marks H2AK119ub and H2BK120ub by LC-MS/MS. Biorxiv : the Preprint Server For Biology. PMID 38915586 DOI: 10.1101/2024.06.11.596744  0.615
2024 Gates LA, Reis BS, Lund PJ, Paul MR, Leboeuf M, Djomo AM, Nadeem Z, Lopes M, Vitorino FN, Unlu G, Carroll TS, Birsoy K, Garcia BA, Mucida D, Allis CD. Histone butyrylation in the mouse intestine is mediated by the microbiota and associated with regulation of gene expression. Nature Metabolism. PMID 38413806 DOI: 10.1038/s42255-024-00992-2  0.626
2023 Khazaei S, Chen CCL, Andrade AF, Kabir N, Azarafshar P, Morcos SM, França JA, Lopes M, Lund PJ, Danieau G, Worme S, Adnani L, Nzirorera N, Chen X, Yogarajah G, et al. Single substitution in H3.3G34 alters DNMT3A recruitment to cause progressive neurodegeneration. Cell. 186: 1162-1178.e20. PMID 36931244 DOI: 10.1016/j.cell.2023.02.023  0.488
2022 Lund PJ, Gates LA, Leboeuf M, Smith SA, Chau L, Lopes M, Friedman ES, Saiman Y, Kim MS, Shoffler CA, Petucci C, Allis CD, Wu GD, Garcia BA. Stable isotope tracing in vivo reveals a metabolic bridge linking the microbiota to host histone acetylation. Cell Reports. 41: 111809. PMID 36516747 DOI: 10.1016/j.celrep.2022.111809  0.616
2022 Kori Y, Lund PJ, Trovato M, Sidoli S, Yuan ZF, Noh KM, Garcia BA. Multi-omic profiling of histone variant H3.3 lysine 27 methylation reveals a distinct role from canonical H3 in stem cell differentiation. Molecular Omics. PMID 35044400 DOI: 10.1039/d1mo00352f  0.757
2021 Lund PJ, Lopes M, Sidoli S, Coradin M, Vitorino FNL, da Cunha JPC, Garcia BA. FGF-2 induces a failure of cell cycle progression in cells harboring amplified K-Ras, revealing new insights into oncogene-induced senescence. Molecular Omics. 17: 725-739. PMID 34636387 DOI: 10.1039/d1mo00019e  0.752
2021 Saiman Y, Shen TD, Lund PJ, Gershuni VM, Jang C, Patel S, Jung S, Furth EE, Friedman ES, Chau L, Garcia BA, Wu GD. Global Microbiota-Dependent Histone Acetylation Patterns are Irreversible and Independent of Short Chain Fatty Acids. Hepatology (Baltimore, Md.). PMID 34233020 DOI: 10.1002/hep.32043  0.644
2020 Robinson AE, Binek A, Venkatraman V, Searle BC, Holewinski RJ, Rosenberger G, Parker SJ, Basisty N, Xie X, Lund PJ, Saxena G, Mato JM, Garcia BA, Schilling B, Lu SC, et al. Lysine and Arginine Protein Post-translational Modifications by Enhanced DIA Libraries: Quantification in Murine Liver Disease. Journal of Proteome Research. PMID 32966080 DOI: 10.1021/acs.jproteome.0c00685  0.557
2020 Bittinger K, Zhao C, Li Y, Ford E, Friedman ES, Ni J, Kulkarni CV, Cai J, Tian Y, Liu Q, Patterson AD, Sarkar D, Chan SHJ, Maranas C, Saha-Shah A, ... Lund P, et al. Bacterial colonization reprograms the neonatal gut metabolome. Nature Microbiology. PMID 32284564 DOI: 10.1038/S41564-020-0694-0  0.728
2020 Lund P, Smith S, Simithy J, Chau L, Friedman E, Saiman Y, Gates L, Leboeuf M, Trefely S, Lopes M, Yuan Z, Janssen K, Kim M, Petucci C, Snyder N, et al. P165 INFLUENCE OF THE GUT MICROBIOTA ON COLONIC HISTONE MODIFICATIONS THROUGH BUTYRATE METABOLISM UNDER HEALTHY AND INFLAMMATORY CONDITIONS Gastroenterology. 158: S67. DOI: 10.1053/J.Gastro.2019.11.170  0.739
2019 Lund PJ, Lehman SM, Garcia BA. Quantitative analysis of global protein lysine methylation by mass spectrometry. Methods in Enzymology. 626: 475-498. PMID 31606088 DOI: 10.1016/Bs.Mie.2019.07.036  0.788
2019 Sidoli S, Lopes M, Lund PJ, Goldman N, Fasolino M, Coradin M, Kulej K, Bhanu NV, Vahedi G, Garcia BA. A mass spectrometry-based assay using metabolic labeling to rapidly monitor chromatin accessibility of modified histone proteins. Scientific Reports. 9: 13613. PMID 31541121 DOI: 10.1038/S41598-019-49894-4  0.762
2019 Lee CH, Yu JR, Granat J, Saldaña-Meyer R, Andrade J, LeRoy G, Jin Y, Lund P, Stafford JM, Garcia BA, Ueberheide B, Reinberg D. Automethylation of PRC2 promotes H3K27 methylation and is impaired in H3K27M pediatric glioma. Genes & Development. PMID 31488577 DOI: 10.1101/Gad.328773.119  0.769
2019 Yucel N, Wang YX, Mai T, Porpiglia E, Lund PJ, Markov G, Garcia BA, Bendall SC, Angelo M, Blau HM. Glucose Metabolism Drives Histone Acetylation Landscape Transitions that Dictate Muscle Stem Cell Function. Cell Reports. 27: 3939-3955.e6. PMID 31242425 DOI: 10.1016/J.Celrep.2019.05.092  0.561
2019 Jain SU, Do TJ, Lund PJ, Rashoff AQ, Diehl KL, Cieslik M, Bajic A, Juretic N, Deshmukh S, Venneti S, Muir TW, Garcia BA, Jabado N, Lewis PW. PFA ependymoma-associated protein EZHIP inhibits PRC2 activity through a H3 K27M-like mechanism. Nature Communications. 10: 2146. PMID 31086175 DOI: 10.1038/S41467-019-09981-6  0.522
2019 Lund PJ, Kori Y, Zhao X, Sidoli S, Yuan ZF, Garcia BA. Isotopic Labeling and Quantitative Proteomics of Acetylation on Histones and Beyond. Methods in Molecular Biology (Clifton, N.J.). 1977: 43-70. PMID 30980322 DOI: 10.1007/978-1-4939-9232-4_5  0.771
2018 Liu X, Cooper DE, Cluntun AA, Warmoes MO, Zhao S, Reid MA, Liu J, Lund PJ, Lopes M, Garcia BA, Wellen KE, Kirsch DG, Locasale JW. Acetate Production from Glucose and Coupling to Mitochondrial Metabolism in Mammals. Cell. PMID 30245009 DOI: 10.1016/J.Cell.2018.08.040  0.443
2018 Shastrula PK, Lund PJ, Garcia BA, Janicki SM. Rpp29 regulates histone H3.3 chromatin assembly through transcriptional mechanisms. The Journal of Biological Chemistry. PMID 29921582 DOI: 10.1074/jbc.RA118.001845  0.571
2018 Friedman ES, Bittinger K, Esipova TV, Hou L, Chau L, Jiang J, Mesaros C, Lund PJ, Liang X, FitzGerald GA, Goulian M, Lee D, Garcia BA, Blair IA, Vinogradov SA, et al. Microbes vs. chemistry in the origin of the anaerobic gut lumen. Proceedings of the National Academy of Sciences of the United States of America. PMID 29610310 DOI: 10.1073/Pnas.1718635115  0.383
2017 Kori Y, Sidoli S, Yuan ZF, Lund PJ, Zhao X, Garcia BA. Proteome-wide acetylation dynamics in human cells. Scientific Reports. 7: 10296. PMID 28860605 DOI: 10.1038/S41598-017-09918-3  0.757
2017 Friedman ES, Esipova TV, Bittinger K, Hou L, Chau L, Jiang J, Mesaros C, Lund P, Liang X, FitzGerald G, Lee D, Blair IA, Garcia B, Vinogradov S, Wu GD. Origins of the Anaerobic Gut Lumen: Microbes vs. Chemistry Gastroenterology. 152: S33. DOI: 10.1016/S0016-5085(17)30474-2  0.459
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