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Suliana Manley, Ph.D. - Publications

Affiliations: 
2004 Harvard University, Cambridge, MA, United States 
Area:
condensed matter, colloidal dispersions, rheology
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79 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Lycas MD, Manley S. DNA-PAINT adaptors make for efficient multiplexing. Cell Reports Methods. 4: 100801. PMID 38889688 DOI: 10.1016/j.crmeth.2024.100801  0.742
2021 Lelek M, Gyparaki MT, Beliu G, Schueder F, Griffié J, Manley S, Jungmann R, Sauer M, Lakadamyali M, Zimmer C. Single-molecule localization microscopy. Nature Reviews. Methods Primers. 1. PMID 35663461 DOI: 10.1038/s43586-021-00038-x  0.57
2020 Sieben C, Sezgin E, Eggeling C, Manley S. Influenza A viruses use multivalent sialic acid clusters for cell binding and receptor activation. Plos Pathogens. 16: e1008656. PMID 32639985 DOI: 10.1371/Journal.Ppat.1008656  0.303
2020 Mahecic D, Gambarotto D, Douglass KM, Fortun D, Banterle N, Ibrahim KA, Le Guennec M, Gönczy P, Hamel V, Guichard P, Manley S. Homogeneous multifocal excitation for high-throughput super-resolution imaging. Nature Methods. 17: 726-733. PMID 32572233 DOI: 10.1038/S41592-020-0859-Z  0.428
2020 Sieben C, Sezgin E, Eggeling C, Manley S. Molecule blinking correction for EGFR data. Plos Pathogens. DOI: 10.1371/Journal.Ppat.1008656.S013  0.336
2020 Sieben C, Sezgin E, Eggeling C, Manley S. IAVs colocalize with EGFR and pEGFR on A549 cells. Plos Pathogens. DOI: 10.1371/Journal.Ppat.1008656.S011  0.303
2020 Sieben C, Sezgin E, Eggeling C, Manley S. Localization precision partly mimics local concentration gradient. Plos Pathogens. DOI: 10.1371/Journal.Ppat.1008656.S007  0.301
2020 Sieben C, Sezgin E, Eggeling C, Manley S. Nanoscale Ezrin organization in A549 cells. Plos Pathogens. DOI: 10.1371/Journal.Ppat.1008656.S005  0.359
2020 Sieben C, Sezgin E, Eggeling C, Manley S. Nanoscale glycan organization in A549 cells. Plos Pathogens. DOI: 10.1371/Journal.Ppat.1008656.S004  0.307
2020 Sieben C, Sezgin E, Eggeling C, Manley S. EGFR is immobilized after chemical fixation. Plos Pathogens. DOI: 10.1371/Journal.Ppat.1008656.S003  0.365
2019 Mahecic D, Testa I, Griffié J, Manley S. Strategies for increasing the throughput of super-resolution microscopies. Current Opinion in Chemical Biology. 51: 84-91. PMID 31212117 DOI: 10.1016/J.Cbpa.2019.05.012  0.339
2019 Gerganova V, Floderer C, Archetti A, Michon L, Carlini L, Reichler T, Manley S, Martin SG. Multi-phosphorylation reaction and clustering tune Pom1 gradient mid-cell levels according to cell size. Elife. 8. PMID 31050340 DOI: 10.7554/Elife.45983  0.376
2019 Archetti A, Glushkov E, Sieben C, Stroganov A, Radenovic A, Manley S. Waveguide-PAINT offers an open platform for large field-of-view super-resolution imaging. Nature Communications. 10: 1267. PMID 30894525 DOI: 10.1038/S41467-019-09247-1  0.405
2019 Goujon A, Colom A, Straková K, Mercier V, Mahecic D, Manley S, Sakai N, Roux A, Matile S. Mechanosensitive Fluorescent Probes to Image Membrane Tension in Mitochondria, Endoplasmic Reticulum, and Lysosomes. Journal of the American Chemical Society. PMID 30744381 DOI: 10.1021/Jacs.8B13189  0.346
2019 Glushkov E, Archetti A, Stroganov A, Comtet J, Thakur M, Navikas V, Lihter M, Marin JFG, Babenko V, Hofmann S, Manley S, Radenovic A. Waveguide-Based Platform for Large-FOV Imaging of Optically Active Defects in 2D Materials Acs Photonics. 6: 3100-3107. DOI: 10.1021/Acsphotonics.9B01103  0.324
2019 Manley S. High-Throughput Super-Resolution Microscopy for Revealing Molecular Architecture Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.060  0.331
2018 Štefko M, Ottino B, Douglass KM, Manley S. Autonomous illumination control for localization microscopy. Optics Express. 26: 30882-30900. PMID 30469980 DOI: 10.1364/Oe.26.030882  0.371
2018 Sieben C, Banterle N, Douglass KM, Gönczy P, Manley S. Multicolor single-particle reconstruction of protein complexes. Nature Methods. 15: 777-780. PMID 30275574 DOI: 10.1016/J.Bpj.2018.11.177  0.374
2018 Lambert A, Vanhecke A, Archetti A, Holden S, Schaber F, Pincus Z, Laub MT, Goley E, Manley S. Constriction Rate Modulation Can Drive Cell Size Control and Homeostasis in C. crescentus. Iscience. 4: 180-189. PMID 30240739 DOI: 10.1016/J.Isci.2018.05.020  0.731
2018 Sieben C, Douglass KM, Guichard P, Manley S. Super-resolution microscopy to decipher multi-molecular assemblies. Current Opinion in Structural Biology. 49: 169-176. PMID 29621666 DOI: 10.1016/J.Sbi.2018.03.017  0.353
2017 Prouteau M, Desfosses A, Sieben C, Bourgoint C, Lydia Mozaffari N, Demurtas D, Mitra AK, Guichard P, Manley S, Loewith R. TORC1 organized in inhibited domains (TOROIDs) regulate TORC1 activity. Nature. PMID 28976958 DOI: 10.1038/Nature24021  0.33
2017 Verdier T, Gunzenhauser J, Manley S, Castelnovo M. Single particle maximum likelihood reconstruction from superresolution microscopy images. Plos One. 12: e0172943. PMID 28253349 DOI: 10.1371/Journal.Pone.0172943  0.375
2016 Bergé M, Campagne S, Mignolet J, Holden S, Théraulaz L, Manley S, Allain FH, Viollier PH. Modularity and determinants of a (bi-)polarization control system from free-living and obligate intracellular bacteria. Elife. 5. PMID 28008852 DOI: 10.7554/Elife.20640  0.699
2016 Mignolet J, Holden S, Bergé M, Panis G, Eroglu E, Théraulaz L, Manley S, Viollier PH. Functional dichotomy and distinct nanoscale assemblies of a cell cycle-controlled bipolar zinc-finger regulator. Elife. 5. PMID 28008851 DOI: 10.7554/Elife.18647  0.712
2016 Deluz C, Friman ET, Strebinger D, Benke A, Raccaud M, Callegari A, Leleu M, Manley S, Suter DM. A role for mitotic bookmarking of SOX2 in pluripotency and differentiation. Genes & Development. PMID 27920086 DOI: 10.1101/Gad.289256.116  0.304
2016 Douglass KM, Sieben C, Archetti A, Lambert A, Manley S. Super-resolution imaging of multiple cells by optimised flat-field epi-illumination. Nature Photonics. 10: 705-708. PMID 27818707 DOI: 10.1038/Nphoton.2016.200  0.788
2016 Nasu Y, Benke A, Arakawa S, Yoshida GJ, Kawamura G, Manley S, Shimizu S, Ozawa T. In Situ Characterization of Bak Clusters Responsible for Cell Death Using Single Molecule Localization Microscopy. Scientific Reports. 6: 27505. PMID 27293178 DOI: 10.1038/Srep27505  0.325
2016 Fabre PJ, Benke A, Manley S, Duboule D. Visualizing the HoxD Gene Cluster at the Nanoscale Level. Cold Spring Harbor Symposia On Quantitative Biology. PMID 26767994 DOI: 10.1101/Sqb.2015.80.027177  0.738
2016 Manley S, Douglass K, Pfeiffer V, Vancevska A, Fabre P, Benke A, Joye E, Nguyen Huynh TH, Duboule D, Lingner J. Nanoscale Spatial Organization of Chromatin in its Cellular Context, from Telomeres to Hox Biophysical Journal. 110: 485a. DOI: 10.1016/J.Bpj.2015.11.2591  0.717
2015 Carlini L, Holden SJ, Douglass KM, Manley S. Correction of a Depth-Dependent Lateral Distortion in 3D Super-Resolution Imaging. Plos One. 10: e0142949. PMID 26600467 DOI: 10.1371/Journal.Pone.0142949  0.73
2015 Fabre PJ, Benke A, Joye E, Nguyen Huynh TH, Manley S, Duboule D. Nanoscale spatial organization of the HoxD gene cluster in distinct transcriptional states. Proceedings of the National Academy of Sciences of the United States of America. 112: 13964-9. PMID 26504220 DOI: 10.1073/Pnas.1517972112  0.731
2015 Sage D, Kirshner H, Pengo T, Stuurman N, Min J, Manley S, Unser M. Quantitative evaluation of software packages for single-molecule localization microscopy. Nature Methods. 12: 717-24. PMID 26076424 DOI: 10.1038/Nmeth.3442  0.327
2015 Pengo T, Holden SJ, Manley S. PALMsiever: a tool to turn raw data into results for single-molecule localization microscopy. Bioinformatics (Oxford, England). 31: 797-8. PMID 25362091 DOI: 10.1093/Bioinformatics/Btu720  0.696
2015 Min J, Carlini L, Unser M, Manley S, Ye JC. Fast live cell imaging at nanometer scale using annihilating filter-based low-rank Hankel matrix approach Proceedings of Spie - the International Society For Optical Engineering. 9597. DOI: 10.1117/12.2187393  0.41
2014 Min J, Holden SJ, Carlini L, Unser M, Manley S, Ye JC. 3D high-density localization microscopy using hybrid astigmatic/ biplane imaging and sparse image reconstruction. Biomedical Optics Express. 5: 3935-48. PMID 26526603 DOI: 10.1364/Boe.5.003935  0.741
2014 Gunzenhäuser J, Wyss R, Manley S. A Quantitative Approach to Evaluate the Impact of Fluorescent Labeling on Membrane-Bound HIV-Gag Assembly by Titration of Unlabeled Proteins. Plos One. 9: e115095. PMID 25493438 DOI: 10.1371/Journal.Pone.0115095  0.388
2014 Min J, Vonesch C, Kirshner H, Carlini L, Olivier N, Holden S, Manley S, Ye JC, Unser M. FALCON: fast and unbiased reconstruction of high-density super-resolution microscopy data. Scientific Reports. 4: 4577. PMID 24694686 DOI: 10.1038/Srep04577  0.737
2014 Holden SJ, Pengo T, Meibom KL, Fernandez Fernandez C, Collier J, Manley S. High throughput 3D super-resolution microscopy reveals Caulobacter crescentus in vivo Z-ring organization. Proceedings of the National Academy of Sciences of the United States of America. 111: 4566-71. PMID 24616530 DOI: 10.1073/Pnas.1313368111  0.717
2014 Keller D, Orpinell M, Olivier N, Wachsmuth M, Mahen R, Wyss R, Hachet V, Ellenberg J, Manley S, Gönczy P. Mechanisms of HsSAS-6 assembly promoting centriole formation in human cells. The Journal of Cell Biology. 204: 697-712. PMID 24590172 DOI: 10.1083/Jcb.201307049  0.62
2014 Carlini L, Benke A, Reymond L, Lukinavičius G, Manley S. Reduced dyes enhance single-molecule localization density for live superresolution imaging. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 15: 750-5. PMID 24554553 DOI: 10.1002/Cphc.201301004  0.401
2014 Holden S, Pengo T, Miebom K, Collier J, Manley S. High throughput 3D Palm Imaging Elucidates Mechanisms of Bacterial Cell Division Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.3208  0.359
2014 Achurra P, Holden S, Pengo T, Manley S. Photoactivated localization microscopy for cellular imaging Neuromethods. 86: 87-111. DOI: 10.1007/978-1-62703-983-3-5  0.777
2013 Carlini L, Manley S. Live intracellular super-resolution imaging using site-specific stains. Acs Chemical Biology. 8: 2643-8. PMID 24079385 DOI: 10.1021/Cb400467X  0.413
2013 Olivier N, Keller D, Gönczy P, Manley S. Resolution doubling in 3D-STORM imaging through improved buffers. Plos One. 8: e69004. PMID 23874848 DOI: 10.1371/Journal.Pone.0069004  0.424
2013 Olivier N, Keller D, Rajan VS, Gönczy P, Manley S. Simple buffers for 3D STORM microscopy. Biomedical Optics Express. 4: 885-99. PMID 23761850 DOI: 10.1364/Boe.4.000885  0.38
2013 Lukinavičius G, Umezawa K, Olivier N, Honigmann A, Yang G, Plass T, Mueller V, Reymond L, Corrêa IR, Luo ZG, Schultz C, Lemke EA, Heppenstall P, Eggeling C, Manley S, et al. A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins. Nature Chemistry. 5: 132-9. PMID 23344448 DOI: 10.1038/Nchem.1546  0.415
2013 Gunzenhäuser J, Olivier N, Pengo T, Wyss R, Benadiba C, Manley S. Revealing the Impact of Fluorescent Labeling on HIV-Gag Virus-Like Particle Formation by Quantitative Super-Resolution Imaging and Fluorescence Correlation Spectroscopy Biophysical Journal. 104: 4-6. DOI: 10.1016/J.Bpj.2012.11.2317  0.339
2012 Hoze N, Nair D, Hosy E, Sieben C, Manley S, Herrmann A, Sibarita JB, Choquet D, Holcman D. Heterogeneity of AMPA receptor trafficking and molecular interactions revealed by superresolution analysis of live cell imaging. Proceedings of the National Academy of Sciences of the United States of America. 109: 17052-7. PMID 23035245 DOI: 10.1073/Pnas.1204589109  0.407
2012 Gunzenhäuser J, Olivier N, Pengo T, Manley S. Quantitative super-resolution imaging reveals protein stoichiometry and nanoscale morphology of assembling HIV-Gag virions. Nano Letters. 12: 4705-10. PMID 22906128 DOI: 10.1021/Nl3021076  0.383
2012 Benke A, Olivier N, Gunzenhäuser J, Manley S. Multicolor single molecule tracking of stochastically active synthetic dyes. Nano Letters. 12: 2619-24. PMID 22519662 DOI: 10.1021/Nl301018R  0.367
2012 Benke A, Manley S. Live-cell dSTORM of cellular DNA based on direct DNA labeling. Chembiochem : a European Journal of Chemical Biology. 13: 298-301. PMID 22213360 DOI: 10.1002/Cbic.201100679  0.343
2012 Banala S, Maurel D, Manley S, Johnsson K. A caged, localizable rhodamine derivative for superresolution microscopy. Acs Chemical Biology. 7: 289-93. PMID 22026407 DOI: 10.1021/Cb2002889  0.384
2012 Benke A, Meylan X, Manley S. Direct Live-Cell Super-Resolution Imaging of Cellular DNA Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.1226  0.417
2011 Manley S, Gunzenhäuser J, Olivier N. A starter kit for point-localization super-resolution imaging. Current Opinion in Chemical Biology. 15: 813-21. PMID 22119536 DOI: 10.1016/J.Cbpa.2011.10.009  0.401
2011 Sherman E, Barr V, Manley S, Patterson G, Balagopalan L, Akpan I, Regan CK, Merrill RK, Sommers CL, Lippincott-Schwartz J, Samelson LE. Functional nanoscale organization of signaling molecules downstream of the T cell antigen receptor. Immunity. 35: 705-20. PMID 22055681 DOI: 10.1016/J.Immuni.2011.10.004  0.544
2011 Burnette DT, Manley S, Sengupta P, Sougrat R, Davidson MW, Kachar B, Lippincott-Schwartz J. A role for actin arcs in the leading-edge advance of migrating cells. Nature Cell Biology. 13: 371-81. PMID 21423177 DOI: 10.1038/Ncb2205  0.645
2010 Manley S, Gillette JM, Lippincott-Schwartz J. Single-particle tracking photoactivated localization microscopy for mapping single-molecule dynamics. Methods in Enzymology. 475: 109-20. PMID 20627155 DOI: 10.1016/S0076-6879(10)75005-9  0.761
2010 Patterson G, Davidson M, Manley S, Lippincott-Schwartz J. Superresolution imaging using single-molecule localization. Annual Review of Physical Chemistry. 61: 345-67. PMID 20055680 DOI: 10.1146/Annurev.Physchem.012809.103444  0.604
2010 Conrad JC, Wyss HM, Trappe V, Manley S, Miyazaki K, Kaufman LJ, Schofield AB, Reichman DR, Weitz DA. Arrested fluid-fluid phase separation in depletion systems: Implications of the characteristic length on gel formation and rheology Journal of Rheology. 54: 421-438. DOI: 10.1122/1.3314295  0.711
2010 Lippincott-Schwartz J, Manley S, Burnette D, Gillette J, Patterson G. PALM-Based Super-Resolution Imaging and its Applications Biophysical Journal. 98: 619a. DOI: 10.1016/J.Bpj.2009.12.3382  0.778
2009 Shtengel G, Galbraith JA, Galbraith CG, Lippincott-Schwartz J, Gillette JM, Manley S, Sougrat R, Waterman CM, Kanchanawong P, Davidson MW, Fetter RD, Hess HF. Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure. Proceedings of the National Academy of Sciences of the United States of America. 106: 3125-30. PMID 19202073 DOI: 10.1073/Pnas.0813131106  0.757
2009 Subach FV, Patterson GH, Manley S, Gillette JM, Lippincott-Schwartz J, Verkhusha VV. Photoactivatable mCherry for high-resolution two-color fluorescence microscopy. Nature Methods. 6: 153-9. PMID 19169259 DOI: 10.1038/Nmeth.1298  0.758
2009 Lippincott-Schwartz J, Manley S. Putting super-resolution fluorescence microscopy to work. Nature Methods. 6: 21-3. PMID 19116610 DOI: 10.1038/Nmeth.F.233  0.552
2009 Subach FV, Patterson GH, Manley S, Gillette JM, Lippincott-Schwartz J, Verkhusha VV. Erratum: Photoactivatable mCherry for high-resolution two-color fluorescence microscopy Nature Methods. 6: 311-311. DOI: 10.1038/Nmeth0409-311  0.735
2009 Manley S, Patterson GH, Subach FV, Verkhusha VV, Lippincott-Schwartz J. Visualizing the Receptor Assembly Into Clathrin-coated Pits with Super-resolution Two-color Palm and sptPALM Biophysical Journal. 96: 385a. DOI: 10.1016/J.Bpj.2008.12.2882  0.593
2008 Manley S, Gordon VD. Making giant unilamellar vesicles via hydration of a lipid film. Current Protocols in Cell Biology / Editorial Board, Juan S. Bonifacino ... [Et Al.]. Unit 24.3. PMID 18819090 DOI: 10.1002/0471143030.Cb2403S40  0.622
2008 Manley S, Horton MR, Lecszynski S, Gast AP. Sorting of streptavidin protein coats on phase-separating model membranes. Biophysical Journal. 95: 2301-7. PMID 18502811 DOI: 10.1529/Biophysj.107.124024  0.575
2008 Manley S, Gillette JM, Patterson GH, Shroff H, Hess HF, Betzig E, Lippincott-Schwartz J. High-density mapping of single-molecule trajectories with photoactivated localization microscopy. Nature Methods. 5: 155-7. PMID 18193054 DOI: 10.1038/Nmeth.1176  0.759
2007 Bailey AE, Poon WC, Christianson RJ, Schofield AB, Gasser U, Prasad V, Manley S, Segre PN, Cipelletti L, Meyer WV, Doherty MP, Sankaran S, Jankovsky AL, Shiley WL, Bowen JP, et al. Spinodal decomposition in a model colloid-polymer mixture in microgravity. Physical Review Letters. 99: 205701. PMID 18233160 DOI: 10.1103/Physrevlett.99.205701  0.587
2007 Horton MR, Manley S, Arevalo SR, Lobkovsky AE, Gast AP. Crystalline protein domains and lipid bilayer vesicle shape transformations. The Journal of Physical Chemistry. B. 111: 880-5. PMID 17249832 DOI: 10.1021/Jp0660987  0.573
2006 Popescu G, Ikeda T, Goda K, Best-Popescu CA, Laposata M, Manley S, Dasari RR, Badizadegan K, Feld MS. Optical measurement of cell membrane tension. Physical Review Letters. 97: 218101. PMID 17155774 DOI: 10.1103/Physrevlett.97.218101  0.304
2005 Manley S, Wyss HM, Miyazaki K, Conrad JC, Trappe V, Kaufman LJ, Reichman DR, Weitz DA. Glasslike arrest in spinodal decomposition as a route to colloidal gelation. Physical Review Letters. 95: 238302. PMID 16384352 DOI: 10.1103/Physrevlett.95.238302  0.706
2005 Manley S, Davidovitch B, Davies NR, Cipelletti L, Bailey AE, Christianson RJ, Gasser U, Prasad V, Segre PN, Doherty MP, Sankaran S, Jankovsky AL, Shiley B, Bowen J, Eggers J, et al. Time-dependent strength of colloidal gels. Physical Review Letters. 95: 048302. PMID 16090846 DOI: 10.1103/Physrevlett.95.048302  0.584
2005 Manley S, Skotheim JM, Mahadevan L, Weitz DA. Gravitational collapse of colloidal gels. Physical Review Letters. 94: 218302. PMID 16090356 DOI: 10.1103/Physrevlett.94.218302  0.381
2004 Manley S, Cipelletti L, Trappe V, Bailey AE, Christianson RJ, Gasser U, Prasad V, Segre PN, Doherty MP, Sankaran S, Jankovsky AL, Shiley B, Bowen J, Eggers J, Kurta C, et al. Limits to gelation in colloidal aggregation. Physical Review Letters. 93: 108302. PMID 15447462 DOI: 10.1103/Physrevlett.93.108302  0.587
2003 Cipelletti L, Ramos L, Manley S, Pitard E, Weitz DA, Pashkovski EE, Johansson M. Universal non-diffusive slow dynamics in aging soft matter. Faraday Discussions. 123: 237-51; discussion 3. PMID 12638864 DOI: 10.1039/B204495A  0.418
2002 Tee SY, Mucha PJ, Cipelletti L, Manley S, Brenner MP, Segre PN, Weitz DA. Nonuniversal velocity fluctuations of sedimenting particles. Physical Review Letters. 89: 054501. PMID 12144444 DOI: 10.1103/Physrevlett.89.054501  0.629
2001 Sankaran S, Gasser U, Manley S, Valentine M, Prasad V, Rudhardt D, Bailey A, Dinsmore A, Segre P, Doherty M, Week ER, Pusey PN, Weitz DA. Physics of colloids in space-2 (PCS-2) 2001 Conference and Exhibit On International Space Station Utilization.  0.646
2000 Cipelletti L, Manley S, Ball RC, Weitz DA. Universal aging features in the restructuring of fractal colloidal gels. Physical Review Letters. 84: 2275-8. PMID 11017262 DOI: 10.1103/Physrevlett.84.2275  0.39
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