| Year |
Citation |
Score |
| 2024 |
Erickson DE, Simmons KM, Barrand ZA, Ridenour CL, Hawkinson PB, Lemke L, Sellner SP, Brock BN, Rivas AN, Sheridan K, Lemmer D, Yaglom HD, Porter WT, Belanger M, Torrey RM, ... ... Engelthaler DM, et al. Pan-Enterovirus Characterization Reveals Cryptic Circulation of Clinically Relevant Subtypes in Arizona Wastewater. Medrxiv : the Preprint Server For Health Sciences. PMID 38562876 DOI: 10.1101/2023.11.20.23297677 |
0.559 |
|
| 2023 |
Lutgring JD, Kent AG, Bowers JR, Jasso-Selles DE, Albrecht V, Stevens VA, Pfeiffer A, Barnes R, Engelthaler DM, Johnson JK, Gargis AS, Rasheed JK, Limbago BM, Elkins CA, Karlsson M, et al. Comparison of carbapenem-susceptible and carbapenem-resistant at nine sites in the USA, 2013-2016: a resource for antimicrobial resistance investigators. Microbial Genomics. 9. PMID 37987646 DOI: 10.1099/mgen.0.001119 |
0.342 |
|
| 2023 |
Highlander SK, Wood JM, Gillece JD, Folkerts M, Fofanov V, Furstenau T, Singh NK, Guan L, Seuylemezian A, Benardini JN, Engelthaler DM, Venkateswaran K, Keim PS. Multi-faceted metagenomic analysis of spacecraft associated surfaces reveal planetary protection relevant microbial composition. Plos One. 18: e0282428. PMID 36947490 DOI: 10.1371/journal.pone.0282428 |
0.436 |
|
| 2022 |
Monroy-Nieto J, Bowers JR, Montfort P, Adame G, Taverna CG, Yaglom H, Sykes JE, Brady S, Mochon AB, Meyer W, Komatsu K, Engelthaler DM. Phylogenomic Placement of American Southwest-Associated Clinical and Veterinary Isolates Expands Evidence for Distinct VGVI. Microorganisms. 10. PMID 36014098 DOI: 10.3390/microorganisms10081681 |
0.341 |
|
| 2022 |
Naicker SD, Firacative C, van Schalkwyk E, Maphanga TG, Monroy-Nieto J, Bowers JR, Engelthaler DM, Meyer W, Govender NP. Molecular type distribution and fluconazole susceptibility of clinical Cryptococcus gattii isolates from South African laboratory-based surveillance, 2005-2013. Plos Neglected Tropical Diseases. 16: e0010448. PMID 35767529 DOI: 10.1371/journal.pntd.0010448 |
0.31 |
|
| 2021 |
Ridenour CL, Cocking J, Poidmore S, Erickson D, Brock B, Valentine M, Roe CC, Young SJ, Henke JA, Hung KY, Wittie J, Stefanakos E, Sumner C, Ruedas M, Raman V, ... ... Engelthaler DM, et al. St. Louis Encephalitis Virus in the Southwestern United States: A Phylogeographic Case for a Multi-Variant Introduction Event. Frontiers in Genetics. 12: 667895. PMID 34168675 DOI: 10.3389/fgene.2021.667895 |
0.603 |
|
| 2021 |
Naicker SD, Magobo RE, Maphanga TG, Firacative C, van Schalkwyk E, Monroy-Nieto J, Bowers J, Engelthaler DM, Shuping L, Meyer W, Govender NP. Genotype, Antifungal Susceptibility, and Virulence of Clinical South African Strains from National Surveillance, 2005-2009. Journal of Fungi (Basel, Switzerland). 7. PMID 33925754 DOI: 10.3390/jof7050338 |
0.309 |
|
| 2020 |
Bolyen E, Dillon MR, Bokulich NA, Ladner JT, Larsen BB, Hepp CM, Lemmer D, Sahl JW, Sanchez A, Holdgraf C, Sewell C, Choudhury AG, Stachurski J, McKay M, Engelthaler DM, et al. Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity. F1000research. 9: 657. PMID 33500774 DOI: 10.12688/F1000Research.24751.1 |
0.516 |
|
| 2020 |
Roe C, Williamson CHD, Vazquez AJ, Kyger K, Valentine M, Bowers JR, Phillips PD, Harrison V, Driebe E, Engelthaler DM, Sahl JW. Bacterial Genome Wide Association Studies (bGWAS) and Transcriptomics Identifies Cryptic Antimicrobial Resistance Mechanisms in . Frontiers in Public Health. 8: 451. PMID 33014966 DOI: 10.3389/Fpubh.2020.00451 |
0.447 |
|
| 2020 |
Ladner JT, Larsen BB, Bowers JR, Hepp CM, Bolyen E, Folkerts M, Sheridan K, Pfeiffer A, Yaglom H, Lemmer D, Sahl JW, Kaelin EA, Maqsood R, Bokulich NA, Quirk G, ... ... Engelthaler DM, et al. An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona. Mbio. 11. PMID 32887735 DOI: 10.1128/Mbio.02107-20 |
0.565 |
|
| 2020 |
Roe C, Stegger M, Lilje B, Johannesen TB, Ng KL, Sieber RN, Driebe E, Engelthaler DM, Andersen PS. Genomic analyses of clonal complex 45 isolates does not distinguish nasal carriage from bacteraemia. Microbial Genomics. PMID 32667872 DOI: 10.1099/mgen.0.000403 |
0.339 |
|
| 2020 |
Bowers JR, Monroy-Nieto J, Gade L, Travis J, Refojo N, Abrantes R, Santander J, French C, Dignani MC, Hevia AI, Roe CC, Lemmer D, Lockhart SR, Chiller T, Litvintseva AP, ... ... Engelthaler DM, et al. Rhizopus microsporus Infections Associated with Surgical Procedures, Argentina, 2006-2014. Emerging Infectious Diseases. 26: 937-944. PMID 32310081 DOI: 10.3201/Eid2605.191045 |
0.423 |
|
| 2020 |
Hiippala K, Kainulainen V, Suutarinen M, Heini T, Bowers JR, Jasso-Selles D, Lemmer D, Valentine M, Barnes R, Engelthaler DM, Satokari R. Isolation of Anti-Inflammatory and Epithelium Reinforcing and Spp. from A Healthy Fecal Donor. Nutrients. 12. PMID 32230951 DOI: 10.3390/Nu12040935 |
0.313 |
|
| 2020 |
Ezewudo M, Borens A, Chiner-Oms Á, Miotto P, Chindelevitch L, Starks AM, Hanna D, Liwski R, Zignol M, Gilpin C, Niemann S, Kohl TA, Warren RM, Crook D, Gagneux S, ... ... Engelthaler DM, et al. Author Correction: Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase. Scientific Reports. 10: 3531. PMID 32081980 DOI: 10.1038/S41598-020-58955-Y |
0.367 |
|
| 2020 |
Bolyen E, Dillon MR, Bokulich NA, Ladner JT, Larsen BB, Hepp CM, Lemmer D, Sahl JW, Sanchez A, Holdgraf C, Sewell C, Choudhury AG, Stachurski J, McKay M, Engelthaler DM, et al. Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity F1000research. 9: 657. DOI: 10.12688/f1000research.24751.1 |
0.451 |
|
| 2019 |
Engelthaler DM, Streicher EM, Kelley EJ, Allender CJ, Wiggins K, Jimenez D, Lemmer D, Vittinghoff E, Theron G, Sirgel FA, Warren RM, Metcalfe JZ. Minority Genotypic Populations as an Indicator of Subsequent Phenotypic Resistance. American Journal of Respiratory Cell and Molecular Biology. 61: 789-791. PMID 31774334 DOI: 10.1165/Rcmb.2019-0178Le |
0.32 |
|
| 2019 |
Engelthaler DM, Casadevall A. On the Emergence of Cryptococcus gattii in the Pacific Northwest: Ballast Tanks, Tsunamis, and Black Swans. Mbio. 10. PMID 31575770 DOI: 10.1128/Mbio.02193-19 |
0.303 |
|
| 2019 |
Singh A, Masih A, Monroy-Nieto J, Kumar Singh P, Bowers J, Travis J, Khurana A, Engelthaler DM, Meis JF, Chowdhary A. A unique multidrug-resistant clonal Trichophyton population distinct from Trichophytonmentagrophytes / Trichophytoninterdigitale complex causing an ongoing alarming dermatophytosis outbreak in India: genomic insights and resistance profile. Fungal Genetics and Biology : Fg & B. 103266. PMID 31491507 DOI: 10.1016/J.Fgb.2019.103266 |
0.443 |
|
| 2019 |
Wang Q, Modongo C, Allender C, Engelthaler DM, Warren RM, Zetola NM, Shin SS. Utility of targeted, amplicon-based deep sequencing to detect resistance to first-line tuberculosis drugs in Botswana. Antimicrobial Agents and Chemotherapy. PMID 31405858 DOI: 10.1128/Aac.00982-19 |
0.341 |
|
| 2019 |
Schmertmann LJ, Danesi P, Monroy-Nieto J, Bowers J, Engelthaler DM, Malik R, Meyer W, Krockenberger MB. Jet-Setting Koalas Spread Cryptococcus gattii VGII in Australia. Msphere. 4. PMID 31167945 DOI: 10.1128/mSphere.00216-19 |
0.316 |
|
| 2019 |
de Vos M, Ley SD, Wiggins KB, Derendinger B, Dippenaar A, Grobbelaar M, Reuter A, Dolby T, Burns S, Schito M, Engelthaler DM, Metcalfe J, Theron G, van Rie A, Posey J, et al. Bedaquiline Microheteroresistance after Cessation of Tuberculosis Treatment. The New England Journal of Medicine. 380: 2178-2180. PMID 31141643 DOI: 10.1056/Nejmc1815121 |
0.313 |
|
| 2019 |
Colman RE, Mace A, Seifert M, Hetzel J, Mshaiel H, Suresh A, Lemmer D, Engelthaler DM, Catanzaro DG, Young AG, Denkinger CM, Rodwell TC. Whole-genome and targeted sequencing of drug-resistant Mycobacterium tuberculosis on the iSeq100 and MiSeq: A performance, ease-of-use, and cost evaluation. Plos Medicine. 16: e1002794. PMID 31039166 DOI: 10.1371/Journal.Pmed.1002794 |
0.372 |
|
| 2019 |
Birdsell DN, Yaglom H, Rodriguez E, Engelthaler DM, Maurer M, Gaither M, Vinocur J, Weiss J, Terriquez J, Komatsu K, Ormsby ME, Gebhardt M, Solomon C, Nienstadt L, Williamson CHD, et al. Phylogenetic Analysis of Francisella tularensis Group A.II Isolates from 5 Patients with Tularemia, Arizona, USA, 2015-2017. Emerging Infectious Diseases. 25: 944-946. PMID 31002053 DOI: 10.3201/Eid2505.180363 |
0.483 |
|
| 2019 |
Oltean HN, Etienne KA, Roe CC, Gade L, McCotter OZ, Engelthaler DM, Litvintseva AP. Utility of Whole-Genome Sequencing to Ascertain Locally Acquired Cases of Coccidioidomycosis, Washington, USA. Emerging Infectious Diseases. 25: 501-506. PMID 30789132 DOI: 10.3201/Eid2503.181155 |
0.421 |
|
| 2019 |
Barker BM, Rajan S, Teixeira MM, Sewnarine M, Roe C, Engelthaler DM, Galgiani JN. Coccidioidal Meningitis in New York traced to Texas by Fungal Genomic Analysis. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 30715178 DOI: 10.1093/Cid/Ciz052 |
0.387 |
|
| 2019 |
McCotter OZ, Benedict K, Engelthaler DM, Komatsu K, Lucas KD, Mohle-Boetani JC, Oltean H, Vugia D, Chiller TM, Sondermeyer Cooksey GL, Nguyen A, Roe CC, Wheeler C, Sunenshine R. Update on the Epidemiology of coccidioidomycosis in the United States. Medical Mycology. 57: S30-S40. PMID 30690599 DOI: 10.1093/Mmy/Myy095 |
0.302 |
|
| 2019 |
Bowers JR, Valentine M, Harrison V, Fofanov VY, Gillece J, Delisle J, Patton B, Schupp J, Sheridan K, Lemmer D, Ostdiek S, Bains HK, Heim J, Sylvester T, Prasai S, ... ... Engelthaler DM, et al. Genomic Analyses of Acute Flaccid Myelitis Cases among a Cluster in Arizona Provide Further Evidence of Enterovirus D68 Role. Mbio. 10. PMID 30670612 DOI: 10.1128/Mbio.02262-18 |
0.503 |
|
| 2019 |
Zhang S, Li S, Gu W, den Bakker H, Boxrud D, Taylor A, Roe C, Driebe E, Engelthaler DM, Allard M, Brown E, McDermott P, Zhao S, Bruce BB, Trees E, et al. Zoonotic Source Attribution of Salmonella enterica Serotype Typhimurium Using Genomic Surveillance Data, United States. Emerging Infectious Diseases. 25: 82-91. PMID 30561314 DOI: 10.3201/Eid2501.180835 |
0.418 |
|
| 2018 |
Hepp CM, Cocking JH, Valentine M, Young SJ, Damian D, Samuels-Crow KE, Sheridan K, Fofanov VY, Furstenau TN, Busch JD, Erickson DE, Lancione RC, Smith K, Will J, Townsend J, ... ... Engelthaler DM, et al. Phylogenetic analysis of West Nile Virus in Maricopa County, Arizona: Evidence for dynamic behavior of strains in two major lineages in the American Southwest. Plos One. 13: e0205801. PMID 30475820 DOI: 10.1371/Journal.Pone.0205801 |
0.521 |
|
| 2018 |
Ezewudo M, Borens A, Chiner-Oms Á, Miotto P, Chindelevitch L, Starks AM, Hanna D, Liwski R, Zignol M, Gilpin C, Niemann S, Kohl TA, Warren RM, Crook D, Gagneux S, ... ... Engelthaler DM, et al. Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase. Scientific Reports. 8: 15382. PMID 30337678 DOI: 10.1038/S41598-018-33731-1 |
0.416 |
|
| 2018 |
Lockhart SR, Roe CC, Engelthaler DM. Timing the Origin of Cryptococcus gattii sensu stricto, Southeastern United States. Emerging Infectious Diseases. 24: 2095-2097. PMID 30334716 DOI: 10.3201/Eid2411.180975 |
0.349 |
|
| 2018 |
Garner E, Chen C, Xia K, Bowers J, Engelthaler D, McLain J, Edwards MA, Pruden A. Metagenomic characterization of antibiotic resistance genes in full-scale reclaimed water distribution systems and corresponding potable systems. Environmental Science & Technology. PMID 29741366 DOI: 10.1021/Acs.Est.7B05419 |
0.303 |
|
| 2018 |
Bowers JR, Driebe EM, Albrecht V, McDougal LK, Granade M, Roe CC, Lemmer D, Rasheed JK, Engelthaler DM, Keim P, Limbago BM. Improved Subtyping of Staphylococcus aureus Clonal Complex 8 Strains Based on Whole-Genome Phylogenetic Analysis. Msphere. 3. PMID 29720527 DOI: 10.1128/mSphere.00464-17 |
0.508 |
|
| 2018 |
Vu K, Thompson GR, Roe CC, Sykes JE, Dreibe EM, Lockhart SR, Meyer W, Engelthaler DM, Gelli A. Flucytosine resistance in Cryptococcus gattii is indirectly mediated by the FCY2-FCY1-FUR1 pathway. Medical Mycology. PMID 29554336 DOI: 10.1093/Mmy/Myx135 |
0.427 |
|
| 2018 |
Bowers JR, Parise KL, Kelley EJ, Lemmer D, Schupp JM, Driebe EM, Engelthaler DM, Keim P, Barker BM. Direct detection of Coccidioides from Arizona soils using CocciENV, a highly sensitive and specific real-time PCR assay. Medical Mycology. PMID 29534236 DOI: 10.1093/Mmy/Myy007 |
0.477 |
|
| 2018 |
Chung VM, Borazanci EH, Jameson GS, Evans R, Downes M, Truitt ML, Patel H, Lowy AM, Roe D, Ansaldo K, Barrett MT, Korn RL, Caldwell L, Slethaug G, Hultsch R, ... ... Engelthaler D, et al. A SU2C catalyst randomized phase II trial of pembrolizumab with or without paricalcitol in patients with stage IV pancreatic cancer who have been placed in best possible response. Journal of Clinical Oncology. 36: TPS4154-TPS4154. DOI: 10.1200/Jco.2018.36.15_Suppl.Tps4154 |
0.537 |
|
| 2017 |
Miotto P, Tessema B, Tagliani E, Chindelevitch L, Starks AM, Emerson C, Hanna D, Kim PS, Liwski R, Zignol M, Gilpin C, Niemann S, Denkinger CM, Fleming J, Warren RM, ... ... Engelthaler DM, et al. A standardised method for interpreting the association between mutations and phenotypic drug resistance in Mycobacterium tuberculosis. The European Respiratory Journal. 50. PMID 29284687 DOI: 10.1183/13993003.01354-2017 |
0.342 |
|
| 2017 |
Metcalfe JZ, Streicher E, Theron G, Colman RE, Penaloza R, Allender C, Lemmer D, Warren RM, Engelthaler DM. Mycobacterium tuberculosis subculture results in loss of potentially clinically relevant heteroresistance. Antimicrobial Agents and Chemotherapy. PMID 28893776 DOI: 10.1128/Aac.00888-17 |
0.356 |
|
| 2017 |
Rhodes J, Desjardins CA, Sykes SM, Beale MA, Vanhove M, Sakthikumar S, Chen Y, Gujja S, Saif S, Chowdhary A, Lawson DJ, Ponzio V, Colombo AL, Meyer W, Engelthaler DM, et al. Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level. Genetics. PMID 28679543 DOI: 10.1534/Genetics.117.203836 |
0.432 |
|
| 2017 |
Metcalfe JZ, Streicher E, Theron G, Colman RE, Allender C, Lemmer D, Warren R, Engelthaler DM. Cryptic Micro-heteroresistance Explains M. tuberculosis Phenotypic Resistance. American Journal of Respiratory and Critical Care Medicine. PMID 28614668 DOI: 10.1164/Rccm.201703-0556Oc |
0.357 |
|
| 2017 |
Ferreira-Paim K, Andrade-Silva L, Fonseca FM, Ferreira TB, Mora DJ, Andrade-Silva J, Khan A, Dao A, Reis EC, Almeida MT, Maltos A, Junior VR, Trilles L, Rickerts V, Chindamporn A, ... ... Engelthaler DM, et al. MLST-Based Population Genetic Analysis in a Global Context Reveals Clonality amongst Cryptococcus neoformans var. grubii VNI Isolates from HIV Patients in Southeastern Brazil. Plos Neglected Tropical Diseases. 11: e0005223. PMID 28099434 DOI: 10.1371/Journal.Pntd.0005223 |
0.393 |
|
| 2016 |
Sahl JW, Lemmer D, Travis J, Schupp JM, Gillece JD, Aziz M, Driebe EM, Drees KP, Hicks ND, Williamson CH, Hepp CM, Smith DE, Roe C, Engelthaler DM, Wagner DM, et al. NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats. Microbial Genomics. 2: e000074. PMID 28348869 DOI: 10.1099/mgen.0.000074 |
0.484 |
|
| 2016 |
Roe CC, Horn KS, Driebe EM, Bowers J, Terriquez JA, Keim P, Engelthaler DM. Whole genome SNP typing to investigate methicillin-resistant Staphylococcus aureus carriage in a health-care provider as the source of multiple surgical site infections. Hereditas. 153: 11. PMID 28096773 DOI: 10.1186/S41065-016-0017-X |
0.579 |
|
| 2016 |
Dolinger DL, Colman RE, Engelthaler DM, Rodwell TC. Next-generation sequencing-based user-friendly platforms for drug-resistant tuberculosis diagnosis: A promise for the near future. International Journal of Mycobacteriology. 5: S27-S28. PMID 28043592 DOI: 10.1016/J.Ijmyco.2016.09.021 |
0.371 |
|
| 2016 |
Bowers JR, Lemmer D, Sahl JW, Pearson T, Driebe EM, Wojack B, Saubolle MA, Engelthaler DM, Keim P. KlebSeq: A Diagnostic Tool for Surveillance, Detection, and Monitoring of Klebsiella pneumoniae. Journal of Clinical Microbiology. PMID 27510832 DOI: 10.1128/Jcm.00927-16 |
0.704 |
|
| 2016 |
Firacative C, Roe CC, Malik R, Ferreira-Paim K, Escandón P, Sykes JE, Castañón-Olivares LR, Contreras-Peres C, Samayoa B, Sorrell TC, Castañeda E, Lockhart SR, Engelthaler DM, Meyer W. MLST and Whole-Genome-Based Population Analysis of Cryptococcus gattii VGIII Links Clinical, Veterinary and Environmental Strains, and Reveals Divergent Serotype Specific Sub-populations and Distant Ancestors. Plos Neglected Tropical Diseases. 10: e0004861. PMID 27494185 DOI: 10.1371/Journal.Pntd.0004861 |
0.451 |
|
| 2016 |
Colman RE, Anderson J, Lemmer D, Lehmkuhl E, Georghiou SB, Heaton H, Wiggins K, Gillece JD, Schupp JM, Catanzaro DG, Crudu V, Cohen T, Rodwell TC, Engelthaler DM. Rapid Drug Susceptibility Testing of Drug Resistant Mycobacterium tuberculosis Directly from Clinical Samples using Amplicon Sequencing: A Proof of Concept Study. Journal of Clinical Microbiology. PMID 27225403 DOI: 10.1128/Jcm.00535-16 |
0.363 |
|
| 2016 |
Lockhart SR, Roe CC, Engelthaler DM. Whole-Genome Analysis of Cryptococcus gattii, Southeastern United States. Emerging Infectious Diseases. 22: 1098-1101. PMID 27191335 DOI: 10.3201/Eid2206.151455 |
0.307 |
|
| 2016 |
Engelthaler DM, Roe CC, Hepp CM, Teixeira M, Driebe EM, Schupp JM, Gade L, Waddell V, Komatsu K, Arathoon E, Logemann H, Thompson GR, Chiller T, Barker B, Keim P, et al. Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever. Mbio. 7. PMID 27118594 DOI: 10.1128/Mbio.00550-16 |
0.523 |
|
| 2016 |
Engelthaler DM, Valentine M, Bowers J, Pistole J, Driebe EM, Terriquez J, Nienstadt L, Carroll M, Schumacher M, Ormsby ME, Brady S, Livar E, Yazzie D, Waddell V, Peoples M, et al. Hypervirulent emm59 Clone in Invasive Group A Streptococcus Outbreak, Southwestern United States. Emerging Infectious Diseases. 22: 734-8. PMID 26982330 DOI: 10.3201/Eid2204.151582 |
0.536 |
|
| 2015 |
Roume H, Heintz-Buschart A, Muller EEL, May P, Satagopam VP, Laczny CC, Narayanasamy S, Lebrun LA, Hoopmann MR, Schupp JM, Gillece JD, Hicks ND, Engelthaler DM, Sauter T, Keim PS, et al. Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks. Npj Biofilms and Microbiomes. 1: 15007. PMID 28721231 DOI: 10.1038/npjbiofilms.2015.7 |
0.34 |
|
| 2015 |
Struve C, Roe CC, Stegger M, Stahlhut SG, Hansen DS, Engelthaler DM, Andersen PS, Driebe EM, Keim P, Krogfelt KA. Mapping the Evolution of Hypervirulent Klebsiella pneumoniae. Mbio. 6: e00630. PMID 26199326 DOI: 10.1128/Mbio.00630-15 |
0.586 |
|
| 2015 |
Bowers JR, Kitchel B, Driebe EM, MacCannell DR, Roe C, Lemmer D, de Man T, Rasheed JK, Engelthaler DM, Keim P, Limbago BM. Genomic Analysis of the Emergence and Rapid Global Dissemination of the Clonal Group 258 Klebsiella pneumoniae Pandemic. Plos One. 10: e0133727. PMID 26196384 DOI: 10.1371/Journal.Pone.0133727 |
0.584 |
|
| 2015 |
Driebe EM, Sahl JW, Roe C, Bowers JR, Schupp JM, Gillece JD, Kelley E, Price LB, Pearson TR, Hepp CM, Brzoska PM, Cummings CA, Furtado MR, Andersen PS, Stegger M, ... Engelthaler DM, et al. Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus. Plos One. 10: e0130955. PMID 26161978 DOI: 10.1371/Journal.Pone.0130955 |
0.72 |
|
| 2015 |
Colman RE, Schupp JM, Hicks ND, Smith DE, Buchhagen JL, Valafar F, Crudu V, Romancenco E, Noroc E, Jackson L, Catanzaro DG, Rodwell TC, Catanzaro A, Keim P, Engelthaler DM. Detection of Low-Level Mixed-Population Drug Resistance in Mycobacterium tuberculosis Using High Fidelity Amplicon Sequencing. Plos One. 10: e0126626. PMID 25970423 DOI: 10.1371/Journal.Pone.0126626 |
0.549 |
|
| 2015 |
Deng X, Shariat N, Driebe EM, Roe CC, Tolar B, Trees E, Keim P, Zhang W, Dudley EG, Fields PI, Engelthaler DM. Comparative analysis of subtyping methods against a whole-genome-sequencing standard for Salmonella enterica serotype Enteritidis. Journal of Clinical Microbiology. 53: 212-8. PMID 25378576 DOI: 10.1128/Jcm.02332-14 |
0.575 |
|
| 2015 |
Litvintseva AP, Marsden-Haug N, Hurst S, Hill H, Gade L, Driebe EM, Ralston C, Roe C, Barker BM, Goldoft M, Keim P, Wohrle R, Thompson GR, Engelthaler DM, Brandt ME, et al. Valley fever: finding new places for an old disease: coccidioides immitis found in Washington State soil associated with recent human infection. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 60: e1-3. PMID 25165087 DOI: 10.1093/Cid/Ciu681 |
0.514 |
|
| 2015 |
Colman RE, Schupp JM, Hicks ND, Smith DE, Buchhagen JL, Valafar F, Crudu V, Romancenco E, Noroc E, Jackson L, Catanzaro DG, Rodwell TC, Catanzaro A, Keim P, Engelthaler DM. Detection of low-level mixed-population drug resistance in Mycobacterium tuberculosis using high fidelity amplicon sequencing Plos One. 10. DOI: 10.1371/journal.pone.0126626 |
0.43 |
|
| 2015 |
Struve C, Roe CC, Stegger M, Stahlhut SG, Hansen DS, Engelthaler DM, Andersen PS, Driebe EM, Keim P, Krogfelt KA. Mapping the evolution of hypervirulent Klebsiella pneumoniae Mbio. 6. DOI: 10.1128/mBio.00630-15 |
0.339 |
|
| 2015 |
Firacative C, Ferreira-Paim K, Trilles L, Engelthaler DM, Meyer W. Australia in the global picture of the molecular epidemiology of Cryptococcus gattii molecular type VGII Microbiology Australia. 36: 67. DOI: 10.1071/Ma15023 |
0.356 |
|
| 2014 |
Rawat A, Engelthaler DM, Driebe EM, Keim P, Foster JT. MetaGeniE: characterizing human clinical samples using deep metagenomic sequencing. Plos One. 9: e110915. PMID 25365329 DOI: 10.1371/Journal.Pone.0110915 |
0.559 |
|
| 2014 |
Wendt JM, Kaul D, Limbago BM, Ramesh M, Cohle S, Denison AM, Driebe EM, Rasheed JK, Zaki SR, Blau DM, Paddock CD, McDougal LK, Engelthaler DM, Keim PS, Roe CC, et al. Transmission of methicillin-resistant Staphylococcus aureus infection through solid organ transplantation: confirmation via whole genome sequencing. American Journal of Transplantation : Official Journal of the American Society of Transplantation and the American Society of Transplant Surgeons. 14: 2633-9. PMID 25250717 DOI: 10.1111/Ajt.12898 |
0.513 |
|
| 2014 |
Engelthaler DM, Hicks ND, Gillece JD, Roe CC, Schupp JM, Driebe EM, Gilgado F, Carriconde F, Trilles L, Firacative C, Ngamskulrungroj P, Castañeda E, Lazera Mdos S, Melhem MS, Pérez-Bercoff A, et al. Cryptococcus gattii in North American Pacific Northwest: whole-population genome analysis provides insights into species evolution and dispersal. Mbio. 5: e01464-14. PMID 25028429 DOI: 10.1128/Mbio.01464-14 |
0.561 |
|
| 2014 |
Litvintseva AP, Hurst S, Gade L, Frace MA, Hilsabeck R, Schupp JM, Gillece JD, Roe C, Smith D, Keim P, Lockhart SR, Changayil S, Weil MR, MacCannell DR, Brandt ME, ... Engelthaler DM, et al. Whole-genome analysis of Exserohilum rostratum from an outbreak of fungal meningitis and other infections. Journal of Clinical Microbiology. 52: 3216-22. PMID 24951807 DOI: 10.1128/Jcm.00936-14 |
0.584 |
|
| 2014 |
Kelley EJ, Driebe EM, Etienne K, Brandt ME, Schupp JM, Gillece JD, Trujillo JS, Lockhart SR, Deak E, Keim PS, Engelthaler DM. Real-time PCR assays for genotyping of Cryptococcus gattii in North America. Bmc Microbiology. 14: 125. PMID 24886039 DOI: 10.1186/1471-2180-14-125 |
0.555 |
|
| 2013 |
Stegger M, Driebe EM, Roe C, Lemmer D, Bowers JR, Engelthaler DM, Keim P, Andersen PS. Genome Sequence of Staphylococcus aureus Strain CA-347, a USA600 Methicillin-Resistant Isolate. Genome Announcements. 1. PMID 23887918 DOI: 10.1128/Genomea.00517-13 |
0.569 |
|
| 2013 |
Engelthaler DM, Kelley E, Driebe EM, Bowers J, Eberhard CF, Trujillo J, Decruyenaere F, Schupp JM, Mossong J, Keim P, Even J. Rapid and robust phylotyping of spa t003, a dominant MRSA clone in Luxembourg and other European countries. Bmc Infectious Diseases. 13: 339. PMID 23879266 DOI: 10.1186/1471-2334-13-339 |
0.584 |
|
| 2013 |
Sarovich DS, Colman RE, Price EP, Massire C, Von Schulze AT, Waddell V, Anderson SM, Ecker DJ, Liguori AP, Engelthaler DM, Sampath R, Keim P, Eshoo MW, Wagner DM. Molecular genotyping of Acinetobacter spp. isolated in Arizona, USA, using multilocus PCR and mass spectrometry. Journal of Medical Microbiology. 62: 1295-300. PMID 23741021 DOI: 10.1099/Jmm.0.052381-0 |
0.524 |
|
| 2013 |
Sahl JW, Gillece JD, Schupp JM, Waddell VG, Driebe EM, Engelthaler DM, Keim P. Evolution of a pathogen: a comparative genomics analysis identifies a genetic pathway to pathogenesis in Acinetobacter. Plos One. 8: e54287. PMID 23365658 DOI: 10.1371/Journal.Pone.0054287 |
0.562 |
|
| 2012 |
Neblett Fanfair R, Benedict K, Bos J, Bennett SD, Lo YC, Adebanjo T, Etienne K, Deak E, Derado G, Shieh WJ, Drew C, Zaki S, Sugerman D, Gade L, Thompson EH, ... ... Engelthaler DM, et al. Necrotizing cutaneous mucormycosis after a tornado in Joplin, Missouri, in 2011. The New England Journal of Medicine. 367: 2214-25. PMID 23215557 DOI: 10.1056/Nejmoa1204781 |
0.364 |
|
| 2012 |
Etienne KA, Gillece J, Hilsabeck R, Schupp JM, Colman R, Lockhart SR, Gade L, Thompson EH, Sutton DA, Neblett-Fanfair R, Park BJ, Turabelidze G, Keim P, Brandt ME, Deak E, ... Engelthaler DM, et al. Whole genome sequence typing to investigate the Apophysomyces outbreak following a tornado in Joplin, Missouri, 2011. Plos One. 7: e49989. PMID 23209631 DOI: 10.1371/Journal.Pone.0049989 |
0.599 |
|
| 2012 |
Muller EE, Pinel N, Gillece JD, Schupp JM, Price LB, Engelthaler DM, Levantesi C, Tandoi V, Luong K, Baliga NS, Korlach J, Keim PS, Wilmes P. Genome sequence of "Candidatus Microthrix parvicella" Bio17-1, a long-chain-fatty-acid-accumulating filamentous actinobacterium from a biological wastewater treatment plant. Journal of Bacteriology. 194: 6670-1. PMID 23144412 DOI: 10.1128/Jb.01765-12 |
0.504 |
|
| 2012 |
Kaestli M, Richardson LJ, Colman RE, Tuanyok A, Price EP, Bowers JR, Mayo M, Kelley E, Seymour ML, Sarovich DS, Pearson T, Engelthaler DM, Wagner DM, Keim PS, Schupp JM, et al. Comparison of TaqMan PCR assays for detection of the melioidosis agent Burkholderia pseudomallei in clinical specimens. Journal of Clinical Microbiology. 50: 2059-62. PMID 22442327 DOI: 10.1128/Jcm.06737-11 |
0.662 |
|
| 2012 |
Sarovich DS, Price EP, Von Schulze AT, Cook JM, Mayo M, Watson LM, Richardson L, Seymour ML, Tuanyok A, Engelthaler DM, Pearson T, Peacock SJ, Currie BJ, Keim P, Wagner DM. Characterization of ceftazidime resistance mechanisms in clinical isolates of Burkholderia pseudomallei from Australia. Plos One. 7: e30789. PMID 22363490 DOI: 10.1371/Journal.Pone.0030789 |
0.701 |
|
| 2012 |
Bowers JR, Driebe EM, Nibecker JL, Wojack BR, Sarovich DS, Wong AH, Brzoska PM, Hubert N, Knadler A, Watson LM, Wagner DM, Furtado MR, Saubolle M, Engelthaler DM, Keim PS. Dominance of multidrug resistant CC271 clones in macrolide-resistant streptococcus pneumoniae in Arizona. Bmc Microbiology. 12: 12. PMID 22251616 DOI: 10.1186/1471-2180-12-12 |
0.535 |
|
| 2012 |
Richardson LJ, Kaestli M, Mayo M, Bowers JR, Tuanyok A, Schupp J, Engelthaler D, Wagner DM, Keim PS, Currie BJ. Towards a rapid molecular diagnostic for melioidosis: Comparison of DNA extraction methods from clinical specimens. Journal of Microbiological Methods. 88: 179-81. PMID 22108495 DOI: 10.1016/J.Mimet.2011.10.023 |
0.441 |
|
| 2011 |
Hoopes JD, Driebe EM, Kelley E, Engelthaler DM, Keim PS, Perelson AS, Rong L, Went GT, Nguyen JT. Triple combination antiviral drug (TCAD) composed of amantadine, oseltamivir, and ribavirin impedes the selection of drug-resistant influenza A virus. Plos One. 6: e29778. PMID 22220216 DOI: 10.1371/Journal.Pone.0029778 |
0.49 |
|
| 2011 |
Liguori AP, Warrington SD, Ginther JL, Pearson T, Bowers J, Glass MB, Mayo M, Wuthiekanun V, Engelthaler D, Peacock SJ, Currie BJ, Wagner DM, Keim P, Tuanyok A. Diversity of 16S-23S rDNA internal transcribed spacer (ITS) reveals phylogenetic relationships in Burkholderia pseudomallei and its near-neighbors. Plos One. 6: e29323. PMID 22195045 DOI: 10.1371/Journal.Pone.0029323 |
0.681 |
|
| 2011 |
Gillece JD, Schupp JM, Balajee SA, Harris J, Pearson T, Yan Y, Keim P, DeBess E, Marsden-Haug N, Wohrle R, Engelthaler DM, Lockhart SR. Whole genome sequence analysis of Cryptococcus gattii from the Pacific Northwest reveals unexpected diversity. Plos One. 6: e28550. PMID 22163313 DOI: 10.1371/Journal.Pone.0028550 |
0.727 |
|
| 2011 |
Keim PS, Aarestrup FM, Shakya G, Price LB, Hendriksen RS, Engelthaler DM, Pearson T. Reply to "South Asia instead of Nepal may be the origin of the Haitian cholera outbreak strain". Mbio. 2: e00245-11. PMID 22045990 DOI: 10.1128/Mbio.00245-11 |
0.695 |
|
| 2011 |
Engelthaler DM, Bowers J, Schupp JA, Pearson T, Ginther J, Hornstra HM, Dale J, Stewart T, Sunenshine R, Waddell V, Levy C, Gillece J, Price LB, Contente T, Beckstrom-Sternberg SM, et al. Molecular investigations of a locally acquired case of melioidosis in Southern AZ, USA. Plos Neglected Tropical Diseases. 5: e1347. PMID 22028940 DOI: 10.1371/Journal.Pntd.0001347 |
0.712 |
|
| 2011 |
Hendriksen RS, Price LB, Schupp JM, Gillece JD, Kaas RS, Engelthaler DM, Bortolaia V, Pearson T, Waters AE, Upadhyay BP, Shrestha SD, Adhikari S, Shakya G, Keim PS, Aarestrup FM. Population genetics of Vibrio cholerae from Nepal in 2010: evidence on the origin of the Haitian outbreak. Mbio. 2: e00157-11. PMID 21862630 DOI: 10.1128/Mbio.00157-11 |
0.725 |
|
| 2011 |
James SH, Hartline CB, Harden EA, Driebe EM, Schupp JM, Engelthaler DM, Keim PS, Bowlin TL, Kern ER, Prichard MN. Cyclopropavir inhibits the normal function of the human cytomegalovirus UL97 kinase. Antimicrobial Agents and Chemotherapy. 55: 4682-91. PMID 21788463 DOI: 10.1016/J.Antiviral.2011.03.010 |
0.472 |
|
| 2011 |
Stewart T, Engelthaler DM, Blaney DD, Tuanyok A, Wangsness E, Smith TL, Pearson T, Komatsu KK, Keim P, Currie BJ, Levy C, Sunenshine R. Epidemiology and investigation of melioidosis, Southern Arizona. Emerging Infectious Diseases. 17: 1286-8. PMID 21762589 DOI: 10.3201/Eid1707.100661 |
0.647 |
|
| 2011 |
Waters AE, Contente-Cuomo T, Buchhagen J, Liu CM, Watson L, Pearce K, Foster JT, Bowers J, Driebe EM, Engelthaler DM, Keim PS, Price LB. Multidrug-Resistant Staphylococcus aureus in US Meat and Poultry. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 52: 1227-30. PMID 21498385 DOI: 10.1093/Cid/Cir181 |
0.654 |
|
| 2011 |
Engelthaler DM, Chiller T, Schupp JA, Colvin J, Beckstrom-Sternberg SM, Driebe EM, Moses T, Tembe W, Sinari S, Beckstrom-Sternberg JS, Christoforides A, Pearson JV, Carpten J, Keim P, Peterson A, et al. Next-generation sequencing of Coccidioides immitis isolated during cluster investigation. Emerging Infectious Diseases. 17: 227-32. PMID 21291593 DOI: 10.3201/Eid1702.100620 |
0.566 |
|
| 2011 |
Price LB, Liu CM, Frankel YM, Melendez JH, Aziz M, Buchhagen J, Contente-Cuomo T, Engelthaler DM, Keim PS, Ravel J, Lazarus GS, Zenilman JM. Macroscale spatial variation in chronic wound microbiota: a cross-sectional study. Wound Repair and Regeneration : Official Publication of the Wound Healing Society [and] the European Tissue Repair Society. 19: 80-8. PMID 20946140 DOI: 10.1111/J.1524-475X.2010.00628.X |
0.606 |
|
| 2010 |
Bowers JR, Engelthaler DM, Ginther JL, Pearson T, Peacock SJ, Tuanyok A, Wagner DM, Currie BJ, Keim PS. BurkDiff: a real-time PCR allelic discrimination assay for Burkholderia pseudomallei and B. mallei. Plos One. 5: e15413. PMID 21103048 DOI: 10.1371/Journal.Pone.0015413 |
0.671 |
|
| 2010 |
Brown AN, McSharry JJ, Weng Q, Driebe EM, Engelthaler DM, Sheff K, Keim PS, Nguyen J, Drusano GL. In vitro system for modeling influenza A virus resistance under drug pressure. Antimicrobial Agents and Chemotherapy. 54: 3442-50. PMID 20498316 DOI: 10.1128/Aac.01385-09 |
0.485 |
|
| 2010 |
Wagner DM, Runberg J, Vogler AJ, Lee J, Driebe E, Price LB, Engelthaler DM, Fricke WF, Ravel J, Keim P. No resistance plasmid in Yersinia pestis, North America. Emerging Infectious Diseases. 16: 885-7. PMID 20409397 DOI: 10.3201/Eid1605.090892 |
0.744 |
|
| 2010 |
Sheff KW, York ER, Driebe EM, Barker BM, Rounsley SD, Waddell VG, Beckstrom-Sternberg SM, Beckstrom-Sternberg JS, Keim PS, Engelthaler DM. Development of a rapid, cost-effective TaqMan Real-Time PCR Assay for identification and differentiation of Coccidioides immitis and Coccidioides posadasii. Medical Mycology. 48: 466-9. PMID 20370360 DOI: 10.3109/13693780903218990 |
0.494 |
|
| 2010 |
Liu CM, Driebe EM, Schupp J, Kelley E, Nguyen JT, McSharry JJ, Weng Q, Engelthaler DM, Keim PS. Rapid quantification of single-nucleotide mutations in mixed influenza A viral populations using allele-specific mixture analysis. Journal of Virological Methods. 163: 109-15. PMID 19761797 DOI: 10.1016/J.Jviromet.2009.09.007 |
0.642 |
|
| 2010 |
Sheff KW, Keim PS, Engelthaler DM. Reply to Dr Wiwanitkit Medical Mycology. 48: 680. DOI: 10.3109/13693780903500046 |
0.394 |
|
| 2010 |
Nguyen J, Hoopes J, Driebe E, Sheff K, Engelthaler D, Le M, Patick A. Triple Combination Antiviral Drug (TCAD) Regimen Composed of Amantadine, Ribavirin, and Oseltamivir Imposes a High Genetic Barrier to the Development of Resistance Against Influenza A Viruses In Vitro Antiviral Research. 86: A40. DOI: 10.1016/J.Antiviral.2010.02.393 |
0.305 |
|
| 2009 |
Price LB, Liu CM, Melendez JH, Frankel YM, Engelthaler D, Aziz M, Bowers J, Rattray R, Ravel J, Kingsley C, Keim PS, Lazarus GS, Zenilman JM. Community analysis of chronic wound bacteria using 16S rRNA gene-based pyrosequencing: impact of diabetes and antibiotics on chronic wound microbiota. Plos One. 4: e6462. PMID 19649281 DOI: 10.1371/Journal.Pone.0006462 |
0.619 |
|
| 2009 |
Nguyen JT, Hoopes JD, Smee DF, Prichard MN, Driebe EM, Engelthaler DM, Le MH, Keim PS, Spence RP, Went GT. Triple combination of oseltamivir, amantadine, and ribavirin displays synergistic activity against multiple influenza virus strains in vitro. Antimicrobial Agents and Chemotherapy. 53: 4115-26. PMID 19620324 DOI: 10.1128/Aac.00476-09 |
0.469 |
|
| 2009 |
Vogler AJ, Birdsell D, Price LB, Bowers JR, Beckstrom-Sternberg SM, Auerbach RK, Beckstrom-Sternberg JS, Johansson A, Clare A, Buchhagen JL, Petersen JM, Pearson T, Vaissaire J, Dempsey MP, Foxall P, ... Engelthaler DM, et al. Phylogeography of Francisella tularensis: global expansion of a highly fit clone. Journal of Bacteriology. 191: 2474-84. PMID 19251856 DOI: 10.1128/Jb.01786-08 |
0.775 |
|
| 2007 |
Sunenshine RH, Anderson S, Erhart L, Vossbrink A, Kelly PC, Engelthaler D, Komatsu K. Public health surveillance for coccidioidomycosis in Arizona Annals of the New York Academy of Sciences. 1111: 96-102. PMID 17513465 DOI: 10.1196/Annals.1406.045 |
0.308 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2007 |
Eisen RJ, Enscore RE, Biggerstaff BJ, Reynolds PJ, Ettestad P, Brown T, Pape J, Tanda D, Levy CE, Engelthaler DM, Cheek J, Bueno R, Targhetta J, Montenieri JA, Gage KL. Human plague in the southwestern United States, 1957-2004: spatial models of elevated risk of human exposure to Yersinia pestis. Journal of Medical Entomology. 44: 530-7. PMID 17547242 DOI: 10.1603/0022-2585(2007)44[530:Hpitsu]2.0.Co;2 |
0.298 |
|
| 2023 |
Li X, Muñoz JF, Gade L, Argimon S, Bougnoux ME, Bowers JR, Chow NA, Cuesta I, Farrer RA, Maufrais C, Monroy-Nieto J, Pradhan D, Uehling J, Vu D, Yeats CA, ... ... Engelthaler DM, et al. Comparing genomic variant identification protocols for . Microbial Genomics. 9. PMID 37043380 DOI: 10.1099/mgen.0.000979 |
0.298 |
|
| 2011 |
Engelthaler DM, Balajee SA. Forensics and Epidemiology of Fungal Pathogens Microbial Forensics. 297-314. DOI: 10.1016/B978-0-12-382006-8.00018-9 |
0.296 |
|
| 2016 |
Teixeira Mde M, Patané JS, Taylor ML, Gómez BL, Theodoro RC, de Hoog S, Engelthaler DM, Zancopé-Oliveira RM, Felipe MS, Barker BM. Worldwide Phylogenetic Distributions and Population Dynamics of the Genus Histoplasma. Plos Neglected Tropical Diseases. 10: e0004732. PMID 27248851 DOI: 10.1371/Journal.Pntd.0004732 |
0.295 |
|
| 2018 |
Shin SS, Modongo C, Baik Y, Allender C, Lemmer D, Colman RE, Engelthaler DM, Warren RM, Zetola NM. Mixed infections are associated with poor treatment outcomes among newly diagnosed tuberculosis patients independent of pre-treatment heteroresistance. The Journal of Infectious Diseases. PMID 30085153 DOI: 10.1093/Infdis/Jiy480 |
0.292 |
|
| 2022 |
Monroy-Nieto J, Gade L, Benedict K, Etienne KA, Litvintseva AP, Bowers JR, Engelthaler DM, Chow NA. Genomic Epidemiology Linking Nonendemic Coccidioidomycosis to Travel. Emerging Infectious Diseases. 29: 110-117. PMID 36573555 DOI: 10.3201/eid2901.220771 |
0.291 |
|
| 2010 |
Hoopes J, Le M, Driebe E, Kelley E, Engelthaler D, Patick A, Nguyen J. Evaluation of the Contribution of Amantadine, Ribavirin, and Oseltamivir in a Triple Combination Antiviral Drug (TCAD) Regimen to Suppressing the Emergence of Resistance using a Novel Quantitative Approach Antiviral Research. 86: A34-A35. DOI: 10.1016/J.Antiviral.2010.02.377 |
0.284 |
|
| 2013 |
Thompson GR, Sharma S, Bays DJ, Pruitt R, Engelthaler DM, Bowers J, Driebe EM, Davis M, Libke R, Cohen SH, Pappagianis D. Coccidioidomycosis: adenosine deaminase levels, serologic parameters, culture results, and polymerase chain reaction testing in pleural fluid. Chest. 143: 776-81. PMID 23187746 DOI: 10.1378/Chest.12-1312 |
0.283 |
|
| 2020 |
Oltean HN, Springer M, Bowers JR, Barnes R, Reid G, Valentine M, Engelthaler DM, Toda M, McCotter OZ. Suspected Locally Acquired Coccidioidomycosis in Human, Spokane, Washington, USA. Emerging Infectious Diseases. 26. PMID 31922952 DOI: 10.3201/Eid2603.191536 |
0.282 |
|
| 2021 |
Whitfield MG, Engelthaler DM, Allender C, Folkerts M, Heupink TH, Limberis J, Warren RM, Van Rie A, Metcalfe JZ. Comparative Performance of Genomic Methods for the Detection of Pyrazinamide Resistance and Heteroresistance in Mycobacterium tuberculosis. Journal of Clinical Microbiology. 60: e0190721. PMID 34757831 DOI: 10.1128/JCM.01907-21 |
0.279 |
|
| 2002 |
Huang XZ, Chu MC, Engelthaler DM, Lindler LE. Genotyping of a homogeneous group of Yersinia pestis strains isolated in the United States Journal of Clinical Microbiology. 40: 1164-1173. PMID 11923326 DOI: 10.1128/JCM.40.4.1164-1173.2002 |
0.279 |
|
| 2017 |
Vu K, Thompson GR, Roe C, Sykes J, Dreibe E, Lockhart S, Meyer W, Engelthaler DM, Gelli A. Mechanisms of Flucytosine Resistance in Cryptococcus gattii May Be Independent of the FCY2-FCY1-FUR1 Pathway Open Forum Infectious Diseases. 4: S115-S116. DOI: 10.1093/Ofid/Ofx163.134 |
0.278 |
|
| 2019 |
Gade L, McCotter OZ, Bowers JR, Waddell V, Brady S, Carvajal JA, Sunenshine R, Komatsu KK, Engelthaler DM, Chiller T, Litvintseva AP. The detection of Coccidioides from ambient air in Phoenix, Arizona: Evidence of uneven distribution and seasonality. Medical Mycology. PMID 31506673 DOI: 10.1093/Mmy/Myz093 |
0.275 |
|
| 2020 |
Willby M, Chopra P, Lemmer D, Klein K, Dalton TL, Engelthaler DM, Cegielski P, Posey JE. Molecular evaluation of fluoroquinolone resistance in serial isolates from individuals diagnosed with multidrug-resistant tuberculosis. Antimicrobial Agents and Chemotherapy. PMID 33106264 DOI: 10.1128/AAC.01663-20 |
0.273 |
|
| 2021 |
Roe CC, Urbanz J, Andrews L, Verocai GG, Engelthaler DM, Hepp CM, Sahl JW. Complete mitochondrial genome of (Nematoda, Onchocercidae). Mitochondrial Dna. Part B, Resources. 6: 2572-2574. PMID 34377832 DOI: 10.1080/23802359.2021.1960211 |
0.271 |
|
| 2023 |
Bowers JR, Yaglom HD, Hepp CM, Pfeiffer A, Jasso-Selles D, Bratsch N, Nashio JT, Folkerts M, Wilbur SM, French C, Lemmer D, Fitzpatrick K, Huynh T, Komatsu K, McAuley JB, ... ... Engelthaler DM, et al. Unique Genomic Epidemiology of COVID-19 in the White Mountain Apache Tribe, April to August 2020, Arizona. Msphere. e0065922. PMID 36853059 DOI: 10.1128/msphere.00659-22 |
0.271 |
|
| 2024 |
Yaglom HD, Bhattarai R, Lemmer D, Rust L, Ridenour C, Chorbi K, Kim E, Centner H, Sheridan K, Jasso-Selles D, Erickson DE, French C, Bowers JR, Valentine M, Francis D, ... ... Engelthaler DM, et al. Large Clusters of Invasive emm49 Group A Streptococcus Identified within and across Arizona Healthcare Facilities through Statewide Genomic Surveillance System, 2019-2021. The Journal of Infectious Diseases. PMID 38373258 DOI: 10.1093/infdis/jiae086 |
0.27 |
|
| 2016 |
Jones JM, Hranac CR, Schumacher M, Horn K, Lee DM, Terriquez J, Engelthaler DM, Peoples M, Corrigan J, Replogle A, Souders N, Komatsu KK, Nieto NC. Tick-Borne Relapsing Fever Outbreak Among a High School Football Team at an Outdoor Education Camping Trip, Arizona, 2014. The American Journal of Tropical Medicine and Hygiene. PMID 27430539 DOI: 10.4269/Ajtmh.16-0054 |
0.27 |
|
| 2022 |
Yaglom HD, Maurer M, Collins B, Hojnacki J, Monroy-Nieto J, Bowers JR, Packard S, Erickson DE, Barrand ZA, Simmons KM, Brock BN, Lim ES, Smith S, Hepp CM, Engelthaler DM. One health genomic surveillance and response to a university-based outbreak of the SARS-CoV-2 Delta AY.25 lineage, Arizona, 2021. Plos One. 17: e0272830. PMID 36315517 DOI: 10.1371/journal.pone.0272830 |
0.256 |
|
| 2023 |
Engelthaler DM, Chatters JC, Casadevall A. Was a Pre-Columbian Hitchhiker to Southcentral Washington? Mbio. e0023223. PMID 36880777 DOI: 10.1128/mbio.00232-23 |
0.254 |
|
| 2002 |
Enscore RE, Biggerstaff BJ, Brown TL, Fulgham RE, Reynolds PJ, Engelthaler DM, Levy CE, Parmenter RR, Montenieri JA, Cheek JE, Grinnell RK, Ettestad PJ, Gage KL. Modeling relationships between climate and the frequency of human plague cases in the southwestern United States, 1960-1997. The American Journal of Tropical Medicine and Hygiene. 66: 186-96. PMID 12135292 DOI: 10.4269/Ajtmh.2002.66.186 |
0.254 |
|
| 2008 |
Chang DC, Anderson S, Wannemuehler K, Engelthaler DM, Erhart L, Sunenshine RH, Burwell LA, Park BJ. Testing for coccidioidomycosis among patients with community-acquired pneumonia. Emerging Infectious Diseases. 14: 1053-9. PMID 18598625 DOI: 10.3201/Eid1407.070832 |
0.252 |
|
| 1997 |
Mills JN, Ksiazek TG, Ellis BA, Rollin PE, Nichol ST, Yates TL, Gannon WL, Levy CE, Engelthaler DM, Davis T, Tanda DT, Frampton JW, Nichols CR, Peters CJ, Childs JE. Patterns of association with host and habitat: antibody reactive with Sin Nombre virus in small mammals in the major biotic communities of the southwestern United States. The American Journal of Tropical Medicine and Hygiene. 56: 273-84. PMID 9129529 DOI: 10.4269/Ajtmh.1997.56.273 |
0.25 |
|
| 2018 |
Roe CC, Bowers J, Oltean H, DeBess E, Dufresne PJ, McBurney S, Overy DP, Wanke B, Lysen C, Chiller T, Meyer W, Thompson GR, Lockhart SR, Hepp CM, Engelthaler DM. Dating the Cryptococcus gattii Dispersal to the North American Pacific Northwest. Msphere. 3. PMID 29359190 DOI: 10.1128/mSphere.00499-17 |
0.248 |
|
| 1998 |
Engelthaler DM, Levy CE, Michael Fink T, Tanda D, Davis T. Short report: Decrease in seroprevalence of antibodies to hantavirus in rodents from 1993-1994 hantavirus pulmonary syndrome case sites American Journal of Tropical Medicine and Hygiene. 58: 737-738. PMID 9660455 DOI: 10.4269/Ajtmh.1998.58.737 |
0.246 |
|
| 2018 |
Garner E, McLain J, Bowers J, Engelthaler D, Edwards MA, Pruden A. Microbial ecology and water chemistry impact regrowth of opportunistic pathogens in full-scale reclaimed water distribution systems. Environmental Science & Technology. PMID 30040385 DOI: 10.1021/Acs.Est.8B02818 |
0.246 |
|
| 2016 |
Byron SA, Van Keuren-Jensen KR, Engelthaler DM, Carpten JD, Craig DW. Translating RNA sequencing into clinical diagnostics: opportunities and challenges. Nature Reviews. Genetics. PMID 26996076 DOI: 10.1038/Nrg.2016.10 |
0.242 |
|
| 2020 |
Walter KS, Colijn C, Cohen T, Mathema B, Liu Q, Bowers J, Engelthaler DM, Narechania A, Lemmer D, Croda J, Andrews JR. Genomic variant-identification methods may alter transmission inferences. Microbial Genomics. PMID 32735210 DOI: 10.1099/mgen.0.000418 |
0.241 |
|
| 2021 |
Folkerts ML, Lemmer D, Pfeiffer A, Vasquez D, French C, Jones A, Nguyen M, Larsen B, Porter WT, Sheridan K, Bowers JR, Engelthaler DM. Methods for sequencing the pandemic: benefits of rapid or high-throughput processing. F1000research. 10. PMID 35342619 DOI: 10.12688/f1000research.28352.2 |
0.237 |
|
| 2021 |
Yaglom HD, Gebhardt M, Pfeiffer A, Ormsby ME, Jasso-Selles DE, Lemmer D, Folkerts ML, French C, Maurer M, Bowers JR, Engelthaler DM. Applying Genomic Epidemiology to Characterize a COVID-19 Outbreak in a Developmentally Disabled Adult Group Home Setting, Arizona. Frontiers in Public Health. 9: 668214. PMID 34055726 DOI: 10.3389/fpubh.2021.668214 |
0.236 |
|
| 1997 |
Engelthaler DM, Fink TM, Levy CE, Leslie MJ. The reemergence of Aedes aegypti in Arizona Emerging Infectious Diseases. 3: 241-242. PMID 9204311 DOI: 10.3201/Eid0302.970223 |
0.227 |
|
| 2008 |
Yip FY, Flanders WD, Wolkin A, Engelthaler D, Humble W, Neri A, Lewis L, Backer L, Rubin C. The impact of excess heat events in Maricopa County, Arizona: 2000--2005. International Journal of Biometeorology. 52: 765-72. PMID 18607646 DOI: 10.1007/S00484-008-0169-0 |
0.225 |
|
| 2021 |
Yaglom HD, Hecht G, Goedderz A, Jasso-Selles D, Ely JL, Ruberto I, Bowers JR, Engelthaler DM, Venkat H. Genomic investigation of a household SARS-CoV-2 disease cluster in Arizona involving a cat, dog, and pet owner. One Health (Amsterdam, Netherlands). 13: 100333. PMID 34604494 DOI: 10.1016/j.onehlt.2021.100333 |
0.224 |
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| 2017 |
Iverson SA, Ostdiek S, Prasai S, Engelthaler DM, Kretschmer M, Fowle N, Tokhie HK, Routh J, Sejvar J, Ayers T, Bowers J, Brady S, Rogers S, Nix WA, Komatsu K, et al. Notes from the Field: Cluster of Acute Flaccid Myelitis in Five Pediatric Patients - Maricopa County, Arizona, 2016. Mmwr. Morbidity and Mortality Weekly Report. 66: 758-760. PMID 28727681 DOI: 10.15585/Mmwr.Mm6628A4 |
0.218 |
|
| 2022 |
Ceballos-Garzon A, Monteoliva L, Gil C, Alvarez-Moreno C, Vega-Vela NE, Engelthaler DM, Bowers J, Le Pape P, Parra-Giraldo CM. Genotypic, proteomic, and phenotypic approaches to decipher the response to caspofungin and calcineurin inhibitors in clinical isolates of echinocandin-resistant Candida glabrata. The Journal of Antimicrobial Chemotherapy. 77: 585-597. PMID 34893830 DOI: 10.1093/jac/dkab454 |
0.215 |
|
| 2022 |
Yang C, Sobkowiak B, Naidu V, Codreanu A, Ciobanu N, Gunasekera KS, Chitwood MH, Alexandru S, Bivol S, Russi M, Havumaki J, Cudahy P, Fosburgh H, Allender CJ, Centner H, ... Engelthaler DM, et al. Phylogeography and transmission of M. tuberculosis in Moldova: A prospective genomic analysis. Plos Medicine. 19: e1003933. PMID 35192619 DOI: 10.1371/journal.pmed.1003933 |
0.189 |
|
| 2016 |
Thompson G, Tuscano JM, Dennis M, Singapuri A, Libertini S, Gaudino R, Torres A, Delisle JM, Gillece JD, Schupp JM, Engelthaler DM. A Microbiome Assessment of Medical Marijuana. Clinical Microbiology and Infection : the Official Publication of the European Society of Clinical Microbiology and Infectious Diseases. PMID 27956269 DOI: 10.1016/J.Cmi.2016.12.001 |
0.18 |
|
| 2023 |
Derendinger B, Dippenaar A, de Vos M, Huo S, Alberts R, Tadokera R, Limberis J, Sirgel F, Dolby T, Spies C, Reuter A, Folkerts M, Allender C, Lemmer D, Van Rie A, ... ... Engelthaler DM, et al. Bedaquiline resistance in patients with drug-resistant tuberculosis in Cape Town, South Africa: a retrospective longitudinal cohort study. The Lancet. Microbe. PMID 37931638 DOI: 10.1016/S2666-5247(23)00172-6 |
0.177 |
|
| 2020 |
Murray MT, Riggs MA, Engelthaler DM, Johnson C, Watkins S, Longenberger A, Brett-Major DM, Lowe J, Broadhurst MJ, Ladva CN, Villanueva JM, MacNeil A, Qari S, Kirking HL, Cherry M, et al. Mitigating a COVID-19 Outbreak Among Major League Baseball Players - United States, 2020. Mmwr. Morbidity and Mortality Weekly Report. 69: 1542-1546. PMID 33090983 DOI: 10.15585/mmwr.mm6942a4 |
0.176 |
|
| 2000 |
Engelthaler DM, Hinnebusch BJ, Rittner CM, Gage KL. Quantitative competitive PCR as a technique for exploring flea-Yersina pestis dynamics American Journal of Tropical Medicine and Hygiene. 62: 552-560. PMID 11289663 |
0.176 |
|
| 2020 |
Hiippala K, Barreto G, Burrello C, Diaz-Basabe A, Suutarinen M, Kainulainen V, Bowers JR, Lemmer D, Engelthaler DM, Eklund KK, Facciotti F, Satokari R. Novel Strain and Its Outer Membrane Vesicles Exert Immunoregulatory Effects . Frontiers in Microbiology. 11: 575455. PMID 33281770 DOI: 10.3389/fmicb.2020.575455 |
0.173 |
|
| 2024 |
Porter WT, Gade L, Montfort P, Mihaljevic JR, Bowers JR, Willman A, Klimowski BA, LaFleur BJ, Sunenshine RH, Collins J, Adame G, Brady S, Komatsu KK, Williams S, Toda M, ... ... Engelthaler DM, et al. Understanding the exposure risk of aerosolized Coccidioides in a Valley fever endemic metropolis. Scientific Reports. 14: 1311. PMID 38225347 DOI: 10.1038/s41598-024-51407-x |
0.169 |
|
| 2000 |
Engelthaler DM, Gage KL. Quantities of Yersinia pestis in fleas (Siphonaptera: Pulicidae, Ceratophyllidae, and Hystrichopsyllidae) collected from areas of known or suspected plague activity Journal of Medical Entomology. 37: 422-426. PMID 15535587 |
0.163 |
|
| 1999 |
Engelthaler DM, Gage KL, Montenieri JA, Chu M, Carter LG. PCR detection of Yersinia pestis in fleas: comparison with mouse inoculation. Journal of Clinical Microbiology. 37: 1980-4. PMID 10325359 |
0.162 |
|
| 2023 |
Harris HS, Harris MD, Thompson GR, Engelthaler DM, Montfort PL, Leviner AL, Miller MA. Novel Presentation of Coccidioidomycosis with Myriad Free-Floating Proteinaceous Spheres in the Pericardial Sac of a Southern Sea Otter (Enhydra lutris nereis). Journal of Wildlife Diseases. PMID 37756694 DOI: 10.7589/JWD-D-23-00045 |
0.162 |
|
| 2014 |
Marsden-Haug N, Hill H, Litvintseva AP, Engelthaler DM, Driebe EM, Roe CC, Ralston C, Hurst S, Goldoft M, Gade L, Wohrle R, Thompson GR, Brandt ME, Chiller T. Coccidioides immitis identified in soil outside of its known range - Washington, 2013. Mmwr. Morbidity and Mortality Weekly Report. 63: 450. PMID 24848217 |
0.161 |
|
| 2020 |
Roe CC, Yaglom H, Howard A, Urbanz J, Verocai GG, Andrews L, Harrison V, Barnes R, Lyons T, Bowers JR, Engelthaler DM. Coyotes as Reservoirs for Onchocerca lupi, United States, 2015-2018. Emerging Infectious Diseases. 26: 2989-2993. PMID 33219658 DOI: 10.3201/eid2612.190136 |
0.159 |
|
| 2024 |
Walker FM, Upton JR, Erickson D, Barrand ZA, Brock B, Valentine M, Federman EL, Froehlich EM, Van Pelt L, Hastings L, Sanchez DE, Bergman DL, Engelthaler DM, Hepp CM. Lyssa excreta: Defining parameters for fecal samples as a rabies virus surveillance method. Plos One. 19: e0294122. PMID 38261561 DOI: 10.1371/journal.pone.0294122 |
0.158 |
|
| 2023 |
Hecht G, Sarbo N, Svoboda W, Mead HL, Ruberto I, Altin JA, Engelthaler DM, Venkat H, Yaglom HD. "Sniffing" out SARS-CoV-2 in Arizona working dogs: an exploratory serosurvey. Frontiers in Veterinary Science. 10: 1166101. PMID 37215472 DOI: 10.3389/fvets.2023.1166101 |
0.146 |
|
| 2021 |
Porter WT, Kelley EJ, Bowers JR, Engelthaler DM. Normalization of SARS-CoV-2 viral load via RT-qPCR provides higher-resolution data for comparison across time and between patients. Virus Research. 306: 198604. PMID 34662682 DOI: 10.1016/j.virusres.2021.198604 |
0.142 |
|
| 1999 |
Engelthaler DM, Mosley DG, Cheek JE, Levy CE, Komatsu KK, Ettestad P, Davis T, Tanda DT, Miller L, Frampton JW, Porter R, Bryan RT. Climatic and environmental patterns associated with hantavirus pulmonary syndrome, four corners region, United States Emerging Infectious Diseases. 5: 87-94. PMID 10081675 |
0.123 |
|
| 2017 |
Engelthaler DM, Meyer W. Furthering the Continental Drift Speciation Hypothesis in the Pathogenic Cryptococcus Species Complexes. Msphere. 2. PMID 28630941 DOI: 10.1128/mSphere.00241-17 |
0.118 |
|
| 2022 |
Prasek SM, Pepper IL, Innes GK, Slinski S, Betancourt WQ, Foster AR, Yaglom HD, Porter WT, Engelthaler DM, Schmitz BW. Variant-specific SARS-CoV-2 shedding rates in wastewater. The Science of the Total Environment. 857: 159165. PMID 36195153 DOI: 10.1016/j.scitotenv.2022.159165 |
0.105 |
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