| Year |
Citation |
Score |
| 2018 |
Rudra P, Broadaway KA, Ware EB, Jhun MA, Bielak LF, Zhao W, Smith JA, Peyser PA, Kardia SLR, Epstein MP, Ghosh D. Testing cross-phenotype effects of rare variants in longitudinal studies of complex traits. Genetic Epidemiology. PMID 29601641 DOI: 10.1002/Gepi.22121 |
0.314 |
|
| 2017 |
Zhu B, Song N, Shen R, Arora A, Machiela MJ, Song L, Landi MT, Ghosh D, Chatterjee N, Baladandayuthapani V, Zhao H. Integrating Clinical and Multiple Omics Data for Prognostic Assessment across Human Cancers. Scientific Reports. 7: 16954. PMID 29209073 DOI: 10.1038/S41598-017-17031-8 |
0.303 |
|
| 2017 |
Cho Y, Hu C, Ghosh D. Covariate adjustment using propensity scores for dependent censoring problems in the accelerated failure time model. Statistics in Medicine. PMID 29023972 DOI: 10.1002/Sim.7513 |
0.314 |
|
| 2016 |
Broadaway KA, Cutler DJ, Duncan R, Moore JL, Ware EB, Jhun MA, Bielak LF, Zhao W, Smith JA, Peyser PA, Kardia SL, Ghosh D, Epstein MP. A Statistical Approach for Testing Cross-Phenotype Effects of Rare Variants. American Journal of Human Genetics. 98: 525-540. PMID 26942286 DOI: 10.1016/J.Ajhg.2016.01.017 |
0.301 |
|
| 2015 |
Hua WY, Ghosh D. Equivalence of kernel machine regression and kernel distance covariance for multidimensional phenotype association studies. Biometrics. 71: 812-20. PMID 25939365 DOI: 10.1111/Biom.12314 |
0.311 |
|
| 2014 |
Ghosh D, Li S. Unsupervised outlier profile analysis. Cancer Informatics. 13: 25-33. PMID 25452686 DOI: 10.4137/Cin.S13969 |
0.348 |
|
| 2014 |
Lee Y, Ghosh D, Hardison RC, Zhang Y. MRHMMs: multivariate regression hidden Markov models and the variantS. Bioinformatics (Oxford, England). 30: 1755-6. PMID 24558116 DOI: 10.1093/Bioinformatics/Btu070 |
0.307 |
|
| 2013 |
Ghosh D. Genomic outlier detection in high-throughput data analysis. Methods in Molecular Biology (Clifton, N.J.). 972: 141-53. PMID 23385536 DOI: 10.1007/978-1-60327-337-4_9 |
0.337 |
|
| 2012 |
Ghosh D, Taylor JM, Sargent DJ. Rejoinder for "Meta-analysis for surrogacy: accelerated failure time models and semi-competing risks modelling" Biometrics. 68: 245-247. PMID 22547832 DOI: 10.1111/J.1541-0420.2011.01638.X |
0.319 |
|
| 2012 |
Ghosh D, Taylor JM, Sargent DJ. Meta-analysis for surrogacy: accelerated failure time models and semicompeting risks modeling. Biometrics. 68: 226-32. PMID 21668903 DOI: 10.1111/J.1541-0420.2011.01633.X |
0.308 |
|
| 2010 |
Chen KK, Alam SU, Price JH, Hayes JR, Lin D, Malinowski A, Codemard C, Ghosh D, Pal M, Bhadra SK, Richardson DJ. Picosecond fiber MOPA pumped supercontinuum source with 39 W output power. Optics Express. 18: 5426-32. PMID 20389559 DOI: 10.1364/OE.18.005426 |
0.381 |
|
| 2010 |
Ghosh D. Discrete nonparametric algorithms for outlier detection with genomic data. Journal of Biopharmaceutical Statistics. 20: 193-208. PMID 20309754 DOI: 10.1080/10543400903572704 |
0.335 |
|
| 2010 |
Choi H, Qin ZS, Ghosh D. A double-layered mixture model for the joint analysis of DNA copy number and gene expression data. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 17: 121-37. PMID 20170400 DOI: 10.1089/Cmb.2009.0019 |
0.327 |
|
| 2009 |
Ghosh D, Chakrabarti R. Joint variable selection and classification with immunohistochemical data. Biomarker Insights. 4: 103-10. PMID 19684846 DOI: 10.4137/Bmi.S2465 |
0.316 |
|
| 2009 |
Chen W, Ghosh D, Raghunathan TE, Sargent DJ. Bayesian variable selection with joint modeling of categorical and survival outcomes: an application to individualizing chemotherapy treatment in advanced colorectal cancer. Biometrics. 65: 1030-40. PMID 19210736 DOI: 10.1111/J.1541-0420.2008.01181.X |
0.314 |
|
| 2009 |
Ghosh D, Chinnaiyan AM. Genomic outlier profile analysis: mixture models, null hypotheses, and nonparametric estimation. Biostatistics (Oxford, England). 10: 60-9. PMID 18539648 DOI: 10.1093/Biostatistics/Kxn015 |
0.341 |
|
| 2008 |
Ghosh D. On the Plackett distribution with bivariate censored data. The International Journal of Biostatistics. 4: Article 7. PMID 22462114 DOI: 10.2202/1557-4679.1099 |
0.304 |
|
| 2008 |
Gu W, Choi H, Ghosh D. Global associations between copy number and transcript mRNA microarray data: an empirical study. Cancer Informatics. 6: 17-23. PMID 19259399 DOI: 10.4137/Cin.S342 |
0.306 |
|
| 2008 |
Ghosh D, Banerjee M, Biswas P. Inference for constrained estimation of tumor size distributions. Biometrics. 64: 1009-17. PMID 18371123 DOI: 10.1111/J.1541-0420.2008.01001.X |
0.302 |
|
| 2008 |
Shen R, Ghosh D, Taylor JM. Modeling intra-tumor protein expression heterogeneity in tissue microarray experiments. Statistics in Medicine. 27: 1944-59. PMID 18300332 DOI: 10.1002/Sim.3217 |
0.326 |
|
| 2008 |
Chen W, Ghosh D, Raghunathan TE, Sargent DJ. A false-discovery-rate-based loss framework for selection of interactions. Statistics in Medicine. 27: 2004-21. PMID 17979139 DOI: 10.1002/Sim.3118 |
0.305 |
|
| 2008 |
Ghosh D. Proportional hazards regression for cancer studies Biometrics. 64: 141-148. PMID 17573863 DOI: 10.1111/J.1541-0420.2007.00830.X |
0.329 |
|
| 2007 |
Liu D, Lin X, Ghosh D. Semiparametric regression of multidimensional genetic pathway data: least-squares kernel machines and linear mixed models. Biometrics. 63: 1079-88. PMID 18078480 DOI: 10.1111/J.1541-0420.2007.00799.X |
0.31 |
|
| 2007 |
Yu J, Yu J, Rhodes DR, Tomlins SA, Cao X, Chen G, Mehra R, Wang X, Ghosh D, Shah RB, Varambally S, Pienta KJ, Chinnaiyan AM. A polycomb repression signature in metastatic prostate cancer predicts cancer outcome. Cancer Research. 67: 10657-63. PMID 18006806 DOI: 10.1158/0008-5472.Can-07-2498 |
0.308 |
|
| 2007 |
Rhodes DR, Kalyana-Sundaram S, Tomlins SA, Mahavisno V, Kasper N, Varambally R, Barrette TR, Ghosh D, Varambally S, Chinnaiyan AM. Molecular concepts analysis links tumors, pathways, mechanisms, and drugs. Neoplasia (New York, N.Y.). 9: 443-54. PMID 17534450 DOI: 10.1593/Neo.07292 |
0.319 |
|
| 2007 |
Yu J, Yu J, Almal AA, Dhanasekaran SM, Ghosh D, Worzel WP, Chinnaiyan AM. Feature selection and molecular classification of cancer using genetic programming. Neoplasia (New York, N.Y.). 9: 292-303. PMID 17460773 DOI: 10.1593/Neo.07121 |
0.314 |
|
| 2007 |
Rhodes DR, Kalyana-Sundaram S, Mahavisno V, Varambally R, Yu J, Briggs BB, Barrette TR, Anstet MJ, Kincead-Beal C, Kulkarni P, Varambally S, Ghosh D, Chinnaiyan AM. Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles. Neoplasia (New York, N.Y.). 9: 166-80. PMID 17356713 DOI: 10.1593/Neo.07112 |
0.324 |
|
| 2007 |
Ghosh D, Chinnaiyan AM. Empirical Bayes identification [correction of identication] of tumor progression genes from microarray data. Biometrical Journal. Biometrische Zeitschrift. 49: 68-77. PMID 17342950 DOI: 10.1002/Bimj.200610312 |
0.342 |
|
| 2007 |
Ghosh D. Incorporating monotonicity into the evaluation of a biomarker Biostatistics. 8: 402-413. PMID 16905591 DOI: 10.1093/Biostatistics/Kxl018 |
0.314 |
|
| 2006 |
Ghosh D. Shrunken p-values for assessing differential expression with applications to genomic data analysis Biometrics. 62. PMID 17156284 DOI: 10.1111/J.1541-0420.2006.00616.X |
0.323 |
|
| 2006 |
MacDonald JW, Ghosh D. COPA--cancer outlier profile analysis. Bioinformatics (Oxford, England). 22: 2950-1. PMID 16895932 DOI: 10.1093/Bioinformatics/Btl433 |
0.325 |
|
| 2006 |
Ghosh D. Modelling tumour biology-progression relationships in screening trials Statistics in Medicine. 25: 1872-1884. PMID 16220483 DOI: 10.1002/Sim.2363 |
0.303 |
|
| 2006 |
Ghosh D. Semiparametric inferences for association with semi-competing risks data Statistics in Medicine. 25: 2059-2070. PMID 16196081 DOI: 10.1002/Sim.2327 |
0.307 |
|
| 2006 |
Ghosh D, Chinnaiyan AM. Classification and selection of biomarkers in genomic data using LASSO. Journal of Biomedicine & Biotechnology. 2005: 147-54. PMID 16046820 DOI: 10.1155/Jbb.2005.147 |
0.342 |
|
| 2006 |
Ghosh D. Semiparametric global cross-ratio models for bivariate censored data Scandinavian Journal of Statistics. 33: 609-619. DOI: 10.1111/J.1467-9469.2006.00512.X |
0.316 |
|
| 2005 |
Mehra R, Varambally S, Ding L, Shen R, Sabel MS, Ghosh D, Chinnaiyan AM, Kleer CG. Identification of GATA3 as a breast cancer prognostic marker by global gene expression meta-analysis. Cancer Research. 65: 11259-64. PMID 16357129 DOI: 10.1158/0008-5472.Can-05-2495 |
0.303 |
|
| 2005 |
Shedden K, Chen W, Kuick R, Ghosh D, Macdonald J, Cho KR, Giordano TJ, Gruber SB, Fearon ER, Taylor JM, Hanash S. Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data. Bmc Bioinformatics. 6: 26. PMID 15705192 DOI: 10.1186/1471-2105-6-26 |
0.317 |
|
| 2005 |
Ghosh D, Chinnaiyan AM. Covariate adjustment in the analysis of microarray data from clinical studies. Functional & Integrative Genomics. 5: 18-27. PMID 15378393 DOI: 10.1007/S10142-004-0120-3 |
0.343 |
|
| 2005 |
Mallick BK, Ghosh D, Ghosh M. Bayesian classification of tumours by using gene expression data Journal of the Royal Statistical Society: Series B (Statistical Methodology). 67: 219-234. DOI: 10.1111/J.1467-9868.2005.00498.X |
0.31 |
|
| 2004 |
Shen R, Ghosh D, Chinnaiyan AM. Prognostic meta-signature of breast cancer developed by two-stage mixture modeling of microarray data. Bmc Genomics. 5: 94. PMID 15598354 DOI: 10.1186/1471-2164-5-94 |
0.304 |
|
| 2004 |
Rhodes DR, Yu J, Shanker K, Deshpande N, Varambally R, Ghosh D, Barrette T, Pandey A, Chinnaiyan AM. Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression. Proceedings of the National Academy of Sciences of the United States of America. 101: 9309-14. PMID 15184677 DOI: 10.1073/Pnas.0401994101 |
0.332 |
|
| 2004 |
Rhodes DR, Yu J, Shanker K, Deshpande N, Varambally R, Ghosh D, Barrette T, Pandey A, Chinnaiyan AM. ONCOMINE: a cancer microarray database and integrated data-mining platform. Neoplasia (New York, N.Y.). 6: 1-6. PMID 15068665 DOI: 10.1016/S1476-5586(04)80047-2 |
0.329 |
|
| 2004 |
Ghosh D. Mixture models for assessing differential expression in complex tissues using microarray data Bioinformatics. 20: 1663-1669. PMID 14988124 DOI: 10.1093/Bioinformatics/Bth139 |
0.327 |
|
| 2003 |
Ghosh D. Penalized Discriminant Methods for the Classification of Tumors from Gene Expression Data Biometrics. 59: 992-1000. PMID 14969478 DOI: 10.1111/J.0006-341X.2003.00114.X |
0.324 |
|
| 2003 |
Ghosh D, Lin DY. Semiparametric analysis of recurrent events data in the presence of dependent censoring. Biometrics. 59: 877-85. PMID 14969466 DOI: 10.1111/J.0006-341X.2003.00102.X |
0.512 |
|
| 2003 |
Ghosh D, Barette TR, Rhodes D, Chinnaiyan AM. Statistical issues and methods for meta-analysis of microarray data: a case study in prostate cancer. Functional & Integrative Genomics. 3: 180-8. PMID 12884057 DOI: 10.1007/S10142-003-0087-5 |
0.356 |
|
| 2000 |
Ghosh D, Lin DY. Nonparametric analysis of recurrent events and death. Biometrics. 56: 554-62. PMID 10877316 DOI: 10.1111/J.0006-341X.2000.00554.X |
0.444 |
|
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