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Matthew E. Pipkin, Ph.D. - Publications

Affiliations: 
2006 University of Miami, Coral Gables, FL 
Area:
Immunology, Molecular Biology
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39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Mori LP, Corley MJ, McAuley AT, Pang A, Venables T, Ndhlovu LC, Pipkin ME, Valente ST. Transcriptional and methylation outcomes of didehydro-cortistatin A use in HIV-1-infected CD4 T cells. Life Science Alliance. 7. PMID 39089880 DOI: 10.26508/lsa.202402653  0.365
2023 Melo GA, Xu T, Calôba C, Schutte A, Passos TO, Neto MAN, Brum G, Oliveira-Vieira B, Higa L, Monteiro FLL, Berbert L, Gonçalves ANA, Tanuri A, Viola JPB, Werneck MBF, ... ... Pipkin ME, et al. Cutting Edge: Polycomb Repressive Complex 1 Subunit Cbx4 Positively Regulates Effector Responses in CD8 T Cells. Journal of Immunology (Baltimore, Md. : 1950). 211: 721-726. PMID 37486206 DOI: 10.4049/jimmunol.2200757  0.406
2023 Zhu F, McMonigle RJ, Schroeder AR, Xia X, Figge D, Greer BD, González-Avalos E, Sialer DO, Wang YH, Chandler KM, Getzler AJ, Brown ER, Xiao C, Kutsch O, Harada Y, ... Pipkin ME, et al. Spatiotemporal resolution of germinal center Tfh cell differentiation and divergence from central memory CD4 T cell fate. Nature Communications. 14: 3611. PMID 37330549 DOI: 10.1038/s41467-023-39299-3  0.415
2023 Nguyen QP, Takehara KK, Deng TZ, O'Shea S, Heeg M, Omilusik KD, Milner JJ, Quon S, Pipkin ME, Choi J, Crotty S, Goldrath AW. Transcriptional programming of CD4 T differentiation in viral infection balances effector- and memory-associated gene expression. Science Immunology. 8: eabq7486. PMID 37172104 DOI: 10.1126/sciimmunol.abq7486  0.452
2023 Getzler AJ, Frederick MA, Milner JJ, Venables T, Diao H, Toma C, Nagaraja SD, Albao DS, Bélanger S, Tsuda SM, Kim J, Crotty S, Goldrath AW, Pipkin ME. Mll1 pioneers histone H3K4me3 deposition and promotes formation of CD8 T stem cell memory. Biorxiv : the Preprint Server For Biology. PMID 37090503 DOI: 10.1101/2023.01.18.524461  0.453
2023 Bélanger S, Haupt S, Faliti CE, Getzler A, Choi J, Diao H, Karunadharma PP, Bild NA, Pipkin ME, Crotty S. The Chromatin Regulator Mll1 Supports T Follicular Helper Cell Differentiation by Controlling Expression of Bcl6, LEF-1, and TCF-1. Journal of Immunology (Baltimore, Md. : 1950). PMID 37074193 DOI: 10.4049/jimmunol.2200927  0.483
2023 Quon S, Yu B, Russ BE, Tsyganov K, Nguyen H, Toma C, Heeg M, Hocker JD, Milner JJ, Crotty S, Pipkin ME, Turner SJ, Goldrath AW. DNA architectural protein CTCF facilitates subset-specific chromatin interactions to limit the formation of memory CD8 T cells. Immunity. PMID 37040762 DOI: 10.1016/j.immuni.2023.03.017  0.482
2022 Bélanger S, Haupt S, Freeman BL, Getzler AJ, Diao H, Pipkin ME, Crotty S. The Transcription Factor YY-1 Is an Essential Regulator of T Follicular Helper Cell Differentiation. Journal of Immunology (Baltimore, Md. : 1950). PMID 36096645 DOI: 10.4049/jimmunol.2101176  0.45
2021 Tsuda S, Pipkin ME. Transcriptional Control of Cell Fate Determination in Antigen-Experienced CD8 T Cells. Cold Spring Harbor Perspectives in Biology. PMID 34127445 DOI: 10.1101/cshperspect.a037945  0.508
2021 Milner JJ, Toma C, Quon S, Omilusik K, Scharping NE, Dey A, Reina-Campos M, Nguyen H, Getzler AJ, Diao H, Yu B, Delpoux A, Yoshida TM, Li D, Qi J, ... ... Pipkin ME, et al. Bromodomain protein BRD4 directs and sustains CD8 T cell differentiation during infection. The Journal of Experimental Medicine. 218. PMID 34037670 DOI: 10.1084/jem.20202512  0.477
2021 Xu T, Schutte A, Jimenez L, Gonçalves ANA, Keller A, Pipkin ME, Nakaya HI, Pereira RM, Martinez GJ. Kdm6b Regulates the Generation of Effector CD8 T Cells by Inducing Chromatin Accessibility in Effector-Associated Genes. Journal of Immunology (Baltimore, Md. : 1950). 206: 2170-2183. PMID 33863789 DOI: 10.4049/jimmunol.2001459  0.481
2021 Chen ML, Huang X, Wang H, Hegner C, Liu Y, Shang J, Eliason A, Diao H, Park H, Frey B, Wang G, Mosure SA, Solt LA, Kojetin DJ, Rodriguez-Palacios A, ... ... Pipkin ME, et al. CAR directs T cell adaptation to bile acids in the small intestine. Nature. PMID 33828301 DOI: 10.1038/s41586-021-03421-6  0.337
2021 Pipkin ME. Runx proteins and transcriptional mechanisms that govern memory CD8 T cell development. Immunological Reviews. PMID 33682165 DOI: 10.1111/imr.12954  0.514
2020 Choi J, Diao H, Faliti CE, Truong J, Rossi M, Bélanger S, Yu B, Goldrath AW, Pipkin ME, Crotty S. Bcl-6 is the nexus transcription factor of T follicular helper cells via repressor-of-repressor circuits. Nature Immunology. PMID 32572238 DOI: 10.1038/S41590-020-0706-5  0.548
2020 Hoxha S, Shepard A, Troutman S, Diao H, Doherty JR, Janiszewska M, Witwicki RM, Pipkin ME, Ja WW, Kareta MS, Kissil JL. YAP-mediated recruitment of YY1 and EZH2 represses transcription of key cell cycle regulators. Cancer Research. PMID 32409309 DOI: 10.1158/0008-5472.Can-19-2415  0.513
2020 Chen ML, Sun A, Cao W, Eliason A, Mendez KM, Getzler AJ, Tsuda S, Diao H, Mukori C, Bruno NE, Kim SY, Pipkin ME, Koralov SB, Sundrud MS. Physiological expression and function of the MDR1 transporter in cytotoxic T lymphocytes. The Journal of Experimental Medicine. 217. PMID 32302378 DOI: 10.1084/Jem.20191388  0.513
2019 Diao H, Pipkin M. Stability and flexibility in chromatin structure and transcription underlies memory CD8 T-cell differentiation F1000research. 8: 1278. PMID 31448086 DOI: 10.12688/F1000Research.18211.1  0.562
2018 Wang D, Diao H, Getzler AJ, Rogal W, Frederick MA, Milner J, Yu B, Crotty S, Goldrath AW, Pipkin ME. The Transcription Factor Runx3 Establishes Chromatin Accessibility of cis-Regulatory Landscapes that Drive Memory Cytotoxic T Lymphocyte Formation. Immunity. 48: 659-674.e6. PMID 29669249 DOI: 10.1016/J.Immuni.2018.03.028  0.508
2018 Milner JJ, Toma C, Yu B, Zhang K, Omilusik K, Phan AT, Wang D, Getzler AJ, Nguyen T, Crotty S, Wang W, Pipkin ME, Goldrath AW. Erratum: Runx3 programs CD8+ T cell residency in non-lymphoid tissues and tumours. Nature. PMID 29320476 DOI: 10.1038/Nature25445  0.385
2017 Milner JJ, Toma C, Yu B, Zhang K, Omilusik K, Phan AT, Wang D, Getzler AJ, Nguyen T, Crotty S, Wang W, Pipkin ME, Goldrath AW. Runx3 programs CD8+ T cell residency in non-lymphoid tissues and tumours. Nature. 552: 253-257. PMID 29211713 DOI: 10.1038/Nature24993  0.544
2017 Yu B, Zhang K, Milner JJ, Toma C, Chen R, Scott-Browne JP, Pereira RM, Crotty S, Chang JT, Pipkin ME, Wang W, Goldrath AW. Erratum: Epigenetic landscapes reveal transcription factors that regulate CD8(+) T cell differentiation. Nature Immunology. 18: 705. PMID 28518161 DOI: 10.1038/ni0617-705b  0.459
2017 Yu B, Zhang K, Milner JJ, Toma C, Chen R, Scott-Browne JP, Pereira RM, Crotty S, Chang JT, Pipkin ME, Wang W, Goldrath AW. Epigenetic landscapes reveal transcription factors that regulate CD8(+) T cell differentiation. Nature Immunology. PMID 28288100 DOI: 10.1038/Ni.3706  0.574
2017 Sun M, Ha N, Pham DH, Frederick M, Sharma B, Naruse C, Asano M, Pipkin ME, George RE, Thai TH. Cbx3/HP1γ deficiency confers enhanced tumor-killing capacity on CD8(+) T cells. Scientific Reports. 7: 42888. PMID 28220815 DOI: 10.1038/Srep42888  0.447
2015 Crotty S, Pipkin ME. In vivo RNAi screens: concepts and applications. Trends in Immunology. 36: 315-22. PMID 25937561 DOI: 10.1016/J.It.2015.03.007  0.458
2015 Martinez GJ, Pereira RM, Äijö T, Kim EY, Marangoni F, Pipkin ME, Togher S, Heissmeyer V, Zhang YC, Crotty S, Lamperti ED, Ansel KM, Mempel TR, Lähdesmäki H, Hogan PG, et al. The transcription factor NFAT promotes exhaustion of activated CD8⁺ T cells. Immunity. 42: 265-78. PMID 25680272 DOI: 10.1016/J.Immuni.2015.01.006  0.579
2014 Chen R, Bélanger S, Frederick MA, Li B, Johnston RJ, Xiao N, Liu YC, Sharma S, Peters B, Rao A, Crotty S, Pipkin ME. In vivo RNA interference screens identify regulators of antiviral CD4(+) and CD8(+) T cell differentiation. Immunity. 41: 325-38. PMID 25148027 DOI: 10.1016/J.Immuni.2014.08.002  0.54
2013 Trifari S, Pipkin ME, Bandukwala HS, Äijö T, Bassein J, Chen R, Martinez GJ, Rao A. MicroRNA-directed program of cytotoxic CD8+ T-cell differentiation. Proceedings of the National Academy of Sciences of the United States of America. 110: 18608-13. PMID 24163352 DOI: 10.1073/Pnas.1317191110  0.404
2013 Yigit E, Zhang Q, Xi L, Grilley D, Widom J, Wang JP, Rao A, Pipkin ME. High-resolution nucleosome mapping of targeted regions using BAC-based enrichment. Nucleic Acids Research. 41: e87. PMID 23413004 DOI: 10.1093/Nar/Gkt081  0.438
2010 Pipkin ME, Rao A, Lichtenheld MG. The transcriptional control of the perforin locus. Immunological Reviews. 235: 55-72. PMID 20536555 DOI: 10.1111/J.0105-2896.2010.00905.X  0.729
2010 Pipkin ME, Sacks JA, Cruz-Guilloty F, Lichtenheld MG, Bevan MJ, Rao A. Interleukin-2 and inflammation induce distinct transcriptional programs that promote the differentiation of effector cytolytic T cells. Immunity. 32: 79-90. PMID 20096607 DOI: 10.1016/J.Immuni.2009.11.012  0.665
2009 Pipkin ME, Rao A. SnapShot: effector and memory T cell differentiation. Cell. 138: 606.e1-2. PMID 19665979 DOI: 10.1016/J.Cell.2009.07.020  0.499
2009 Müller MR, Sasaki Y, Stevanovic I, Lamperti ED, Ghosh S, Sharma S, Gelinas C, Rossi DJ, Pipkin ME, Rajewsky K, Hogan PG, Rao A. Requirement for balanced Ca/NFAT signaling in hematopoietic and embryonic development. Proceedings of the National Academy of Sciences of the United States of America. 106: 7034-9. PMID 19351896 DOI: 10.1073/Pnas.0813296106  0.43
2009 Cruz-Guilloty F, Pipkin ME, Djuretic IM, Levanon D, Lotem J, Lichtenheld MG, Groner Y, Rao A. Runx3 and T-box proteins cooperate to establish the transcriptional program of effector CTLs. The Journal of Experimental Medicine. 206: 51-9. PMID 19139168 DOI: 10.1084/Jem.20081242  0.714
2009 Mayoral RJ, Pipkin ME, Pachkov M, van Nimwegen E, Rao A, Monticelli S. MicroRNA-221-222 regulate the cell cycle in mast cells. Journal of Immunology (Baltimore, Md. : 1950). 182: 433-45. PMID 19109175 DOI: 10.4049/Jimmunol.182.1.433  0.384
2008 Pipkin ME, Monticelli S. Genomics and the immune system. Immunology. 124: 23-32. PMID 18298549 DOI: 10.1111/J.1365-2567.2008.02818.X  0.36
2007 Pipkin ME, Lieberman J. Delivering the kiss of death: progress on understanding how perforin works. Current Opinion in Immunology. 19: 301-8. PMID 17433871 DOI: 10.1016/J.Coi.2007.04.011  0.321
2007 Pipkin ME, Ljutic B, Cruz-Guilloty F, Nouzova M, Rao A, Zúñiga-Pflücker JC, Lichtenheld MG. Chromosome transfer activates and delineates a locus control region for perforin. Immunity. 26: 29-41. PMID 17222571 DOI: 10.1016/J.Immuni.2006.11.009  0.695
2006 Pipkin ME, Lichtenheld MG. A reliable method to display authentic DNase I hypersensitive sites at long-ranges in single-copy genes from large genomes. Nucleic Acids Research. 34: e34. PMID 16510851 DOI: 10.1093/Nar/Gkl006  0.656
2003 Lu Q, Wu A, Ray D, Deng C, Attwood J, Hanash S, Pipkin M, Lichtenheld M, Richardson B. DNA methylation and chromatin structure regulate T cell perforin gene expression. Journal of Immunology (Baltimore, Md. : 1950). 170: 5124-32. PMID 12734359 DOI: 10.4049/Jimmunol.170.10.5124  0.696
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