Jenny J. Yang - Publications

Chemistry Georgia State University, Atlanta, GA, United States 

104 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Andrews C, Xu Y, Kirberger M, Yang JJ. Structural Aspects and Prediction of Calmodulin-Binding Proteins. International Journal of Molecular Sciences. 22. PMID 33396740 DOI: 10.3390/ijms22010308  1
2020 Turaga RC, Sharma M, Mishra F, Krasinskas A, Yuan Y, Yang JJ, Wang S, Liu C, Li S, Liu ZR. Modulation of Cancer-associated Fibrotic Stroma by An Integrin αβ Targeting Protein for Pancreatic Cancer Treatment. Cellular and Molecular Gastroenterology and Hepatology. PMID 32810598 DOI: 10.1016/j.jcmgh.2020.08.004  0.96
2020 Tang S, Deng X, Jiang J, Kirberger M, Yang JJ. Design of Calcium-Binding Proteins to Sense Calcium. Molecules (Basel, Switzerland). 25. PMID 32375353 DOI: 10.3390/molecules25092148  1
2020 Salarian M, Ibhagui OY, Yang JJ. Molecular imaging of extracellular matrix proteins with targeted probes using magnetic resonance imaging. Wiley Interdisciplinary Reviews. Nanomedicine and Nanobiotechnology. e1622. PMID 32126587 DOI: 10.1002/wnan.1622  0.8
2020 Tan S, Yang H, Xue S, Qiao J, Salarian M, Hekmatyar K, Meng Y, Mukkavilli R, Pu F, Odubade OY, Harris W, Hai Y, Yushak ML, Morales-Tirado VM, Mittal P, ... ... Yang JJ, et al. Chemokine receptor 4 targeted protein MRI contrast agent for early detection of liver metastases. Science Advances. 6: eaav7504. PMID 32083172 DOI: 10.1126/sciadv.aav7504  0.96
2019 Salarian M, Turaga RC, Xue S, Nezafati M, Hekmatyar K, Qiao J, Zhang Y, Tan S, Ibhagui OY, Hai Y, Li J, Mukkavilli R, Sharma M, Mittal P, Min X, ... ... Yang JJ, et al. Early detection and staging of chronic liver diseases with a protein MRI contrast agent. Nature Communications. 10: 4777. PMID 31664017 DOI: 10.1038/s41467-019-11984-2  0.96
2019 Salarian M, Yang H, Turaga RC, Tan S, Qiao J, Xue S, Gui Z, Peng G, Han H, Mittal P, Grossniklaus HE, Yang JJ. Precision detection of liver metastasis by collagen-targeted protein MRI contrast agent. Biomaterials. 224: 119478. PMID 31542517 DOI: 10.1016/j.biomaterials.2019.119478  0.96
2019 Salarian M, Xue S, Ibhagui OY, Yang JJ. Designing Calcium-Binding Proteins for Molecular MR Imaging. Methods in Molecular Biology (Clifton, N.J.). 1929: 111-125. PMID 30710270 DOI: 10.1007/978-1-4939-9030-6_8  0.96
2018 Chen D, Wei L, Liu ZR, Yang JJ, Gu X, Wei ZZ, Liu LP, Yu SP. Correction to: Pyruvate Kinase M2 Increases Angiogenesis, Neurogenesis, and Functional Recovery Mediated by Upregulation of STAT3 and Focal Adhesion Kinase Activities after Ischemic Stroke in Adult Mice. Neurotherapeutics : the Journal of the American Society For Experimental Neurotherapeutics. PMID 29946982 DOI: 10.1007/s13311-018-0645-0  0.96
2018 Chen D, Wei L, Liu ZR, Yang JJ, Gu X, Wei ZZ, Liu LZ, Yu SP. Pyruvate Kinase M2 Increases Angiogenesis, Neurogenesis, and Functional Recovery Mediated by Upregulation of STAT3 and Focal Adhesion Kinase Activities After Ischemic Stroke in Adult Mice. Neurotherapeutics : the Journal of the American Society For Experimental Neurotherapeutics. PMID 29869055 DOI: 10.1007/s13311-018-0635-2  0.96
2018 Evans PR, Gerber KJ, Dammer EB, Duong DM, Goswami D, Lustberg DJ, Zou J, Yang JJ, Dudek SM, Griffin PR, Seyfried NT, Hepler JR. Interactome Analysis Reveals Regulator of G Protein Signaling 14 (RGS14) is a Novel Calcium/Calmodulin (Ca2+/CaM) and CaM Kinase II (CaMKII) Binding Partner. Journal of Proteome Research. PMID 29518331 DOI: 10.1021/acs.jproteome.8b00027  0.68
2017 Liao A, Mittal P, Lawson DH, Yang JJ, Szalai E, Grossniklaus HE. Radiologic and Histopathologic Correlation of Different Growth Patterns of Metastatic Uveal Melanoma to the Liver. Ophthalmology. PMID 29122287 DOI: 10.1016/j.ophtha.2017.09.029  0.76
2017 Zou J, Salarian M, Chen Y, Zhuo Y, Brown NE, Hepler JR, Yang J. Direct Visualization of Interaction between Calmodulin and Connexin45. The Biochemical Journal. PMID 28963343 DOI: 10.1042/BCJ20170426  0.96
2017 Reddish FN, Miller CL, Gorkhali R, Yang JJ. Monitoring ER/SR Calcium Release with the Targeted Ca2+ Sensor CatchER. Journal of Visualized Experiments : Jove. PMID 28570539 DOI: 10.3791/55822  0.92
2017 Reddish FN, Miller CL, Gorkhali R, Yang JJ. Calcium Dynamics Mediated by the Endoplasmic/Sarcoplasmic Reticulum and Related Diseases. International Journal of Molecular Sciences. 18. PMID 28489021 DOI: 10.3390/ijms18051024  0.92
2017 Zou J, Jiang JY, Yang JJ. Molecular Basis for Modulation of Metabotropic Glutamate Receptors and Their Drug Actions by Extracellular Ca(2). International Journal of Molecular Sciences. 18. PMID 28335551 DOI: 10.3390/ijms18030672  0.68
2016 Zhang C, Miller CL, Gorkhali R, Zou J, Huang K, Brown EM, Yang JJ. Molecular Basis of the Extracellular Ligands Mediated Signaling by the Calcium Sensing Receptor. Frontiers in Physiology. 7: 441. PMID 27746744 DOI: 10.3389/fphys.2016.00441  0.88
2016 Zhu MX, Tuo B, Yang JJ. The hills and valleys of calcium signaling. Science China. Life Sciences. 59: 743-8. PMID 27502903 DOI: 10.1007/s11427-016-5098-2  0.4
2016 Zhang C, Zhang T, Zou J, Miller CL, Gorkhali R, Yang JY, Schilmiller A, Wang S, Huang K, Brown EM, Moremen KW, Hu J, Yang JJ. Structural basis for regulation of human calcium-sensing receptor by magnesium ions and an unexpected tryptophan derivative co-agonist. Science Advances. 2: e1600241. PMID 27386547 DOI: 10.1126/sciadv.1600241  0.92
2016 Turaga RC, Yin L, Yang JJ, Lee H, Ivanov I, Yan C, Yang H, Grossniklaus HE, Wang S, Ma C, Sun L, Liu ZR. Rational design of a protein that binds integrin αvβ3 outside the ligand binding site. Nature Communications. 7: 11675. PMID 27241473 DOI: 10.1038/ncomms11675  0.96
2016 Gorkhali R, Huang K, Kirberger M, Yang JJ. Defining potential roles of Pb(2+) in neurotoxicity from a calciomics approach. Metallomics : Integrated Biometal Science. PMID 27108875 DOI: 10.1039/c6mt00038j  1
2016 Pu F, Xue S, Yang JJ. ProCA1.GRPR: a new imaging agent in cancer detection. Biomarkers in Medicine. PMID 27071673 DOI: 10.2217/bmm-2016-0040  0.88
2016 Pu F, Salarian M, Xue S, Qiao J, Feng J, Tan S, Patel A, Li X, Mamouni K, Hekmatyar K, Zou J, Wu D, Yang JJ. Prostate-specific membrane antigen targeted protein contrast agents for molecular imaging of prostate cancer by MRI. Nanoscale. PMID 26961235 DOI: 10.1039/c5nr09071g  0.96
2016 Pu F, Xue S, Qiao J, Patel A, Yang JJ. Towards the Molecular Imaging of Prostate Cancer Biomarkers Using Protein-based MRI Contrast Agents. Current Protein & Peptide Science. PMID 26721404  0.96
2015 Pu F, Qiao J, Xue S, Yang H, Patel A, Wei L, Hekmatyar K, Salarian M, Grossniklaus HE, Liu ZR, Yang JJ. GRPR-targeted Protein Contrast Agents for Molecular Imaging of Receptor Expression in Cancers by MRI. Scientific Reports. 5: 16214. PMID 26577829 DOI: 10.1038/srep16214  0.88
2015 Tang S, Reddish F, Zhuo Y, Yang JJ. Fast kinetics of calcium signaling and sensor design. Current Opinion in Chemical Biology. 27: 90-7. PMID 26151819 DOI: 10.1016/j.cbpa.2015.06.014  0.92
2015 Xue S, Yang H, Qiao J, Pu F, Jiang J, Hubbard K, Hekmatyar K, Langley J, Salarian M, Long RC, Bryant RG, Hu XP, Grossniklaus HE, Liu ZR, Yang JJ. Protein MRI contrast agent with unprecedented metal selectivity and sensitivity for liver cancer imaging. Proceedings of the National Academy of Sciences of the United States of America. 112: 6607-12. PMID 25971726 DOI: 10.1073/pnas.1423021112  0.88
2015 Zhang C, Miller CL, Brown EM, Yang JJ. The calcium sensing receptor: from calcium sensing to signaling. Science China. Life Sciences. 58: 14-27. PMID 25576451 DOI: 10.1007/s11427-014-4779-y  0.88
2015 Zhuo Y, Solntsev KM, Reddish F, Tang S, Yang JJ. Effect of Ca²⁺ on the steady-state and time-resolved emission properties of the genetically encoded fluorescent sensor CatchER. The Journal of Physical Chemistry. B. 119: 2103-11. PMID 24836743 DOI: 10.1021/jp501707n  0.92
2014 Feng J, Xu X, Li B, Brown E, Farris AB, Sun SY, Yang JJ. Prostate cancer metastatic to bone has higher expression of the calcium-sensing receptor (CaSR) than primary prostate cancer. Receptors & Clinical Investigation. 1. PMID 26065011 DOI: 10.14800/rci.270  0.6
2014 Zhang C, Mulpuri N, Hannan FM, Nesbit MA, Thakker RV, Hamelberg D, Brown EM, Yang JJ. Role of Ca2+ and L-Phe in regulating functional cooperativity of disease-associated "toggle" calcium-sensing receptor mutations. Plos One. 9: e113622. PMID 25420019 DOI: 10.1371/journal.pone.0113622  0.88
2014 Zhang C, Zhuo Y, Moniz HA, Wang S, Moremen KW, Prestegard JH, Brown EM, Yang JJ. Direct determination of multiple ligand interactions with the extracellular domain of the calcium-sensing receptor. The Journal of Biological Chemistry. 289: 33529-42. PMID 25305020 DOI: 10.1074/jbc.M114.604652  0.88
2014 Liu X, Obianyo O, Chan CB, Huang J, Xue S, Yang JJ, Zeng F, Goodman M, Ye K. Biochemical and biophysical investigation of the brain-derived neurotrophic factor mimetic 7,8-dihydroxyflavone in the binding and activation of the TrkB receptor. The Journal of Biological Chemistry. 289: 27571-84. PMID 25143381 DOI: 10.1074/jbc.M114.562561  0.96
2014 Li L, Zhang Y, Qiao J, Yang JJ, Liu ZR. Pyruvate kinase M2 in blood circulation facilitates tumor growth by promoting angiogenesis. The Journal of Biological Chemistry. 289: 25812-21. PMID 25070887 DOI: 10.1074/jbc.M114.576934  0.96
2014 Conroy CV, Jiang J, Zhang C, Ahuja T, Tang Z, Prickett CA, Yang JJ, Wang G. Enhancing near IR luminescence of thiolate Au nanoclusters by thermo treatments and heterogeneous subcellular distributions. Nanoscale. 6: 7416-23. PMID 24879334 DOI: 10.1039/c4nr00827h  0.88
2014 Qiang G, Xue S, Yang JJ, Du G, Pang X, Li X, Goswami D, Griffin PR, Ortlund EA, Chan CB, Ye K. Identification of a small molecular insulin receptor agonist with potent antidiabetes activity. Diabetes. 63: 1394-409. PMID 24651808 DOI: 10.2337/db13-0334  0.88
2014 Chen Y, Xue S, Zou J, Lopez JR, Yang JJ, Perez CF. Myoplasmic resting Ca2+ regulation by ryanodine receptors is under the control of a novel Ca2+-binding region of the receptor. The Biochemical Journal. 460: 261-71. PMID 24635445 DOI: 10.1042/BJ20131553  0.88
2014 Xue S, Qiao J, Jiang J, Hubbard K, White N, Wei L, Li S, Liu ZR, Yang JJ. Design of ProCAs (protein-based Gd(3+) MRI contrast agents) with high dose efficiency and capability for molecular imaging of cancer biomarkers. Medicinal Research Reviews. 34: 1070-99. PMID 24615853 DOI: 10.1002/med.21313  0.96
2014 Zou J, Salarian M, Chen Y, Veenstra R, Louis CF, Yang JJ. Gap junction regulation by calmodulin. Febs Letters. 588: 1430-8. PMID 24440348 DOI: 10.1016/j.febslet.2014.01.003  0.88
2014 Zhang C, Huang Y, Jiang Y, Mulpuri N, Wei L, Hamelberg D, Brown EM, Yang JJ. Identification of an L-phenylalanine binding site enhancing the cooperative responses of the calcium-sensing receptor to calcium. The Journal of Biological Chemistry. 289: 5296-309. PMID 24394414 DOI: 10.1074/jbc.M113.537357  0.88
2014 Qiao J, Xue S, Pu F, White N, Jiang J, Liu ZR, Yang JJ. Molecular imaging of EGFR/HER2 cancer biomarkers by protein MRI contrast agents. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 19: 259-70. PMID 24366655 DOI: 10.1007/s00775-013-1076-3  0.96
2014 Jiang JY, Nagaraju M, Meyer RC, Zhang L, Hamelberg D, Hall RA, Brown EM, Conn PJ, Yang JJ. Extracellular calcium modulates actions of orthosteric and allosteric ligands on metabotropic glutamate receptor 1α. The Journal of Biological Chemistry. 289: 1649-61. PMID 24280223 DOI: 10.1074/jbc.M113.507665  0.88
2013 Zhang Y, Reddish F, Tang S, Zhuo Y, Wang YF, Yang JJ, Weber IT. Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics. Acta Crystallographica. Section D, Biological Crystallography. 69: 2309-19. PMID 24311573 DOI: 10.1107/S0907444913021306  0.92
2013 Kirberger M, Wong HC, Jiang J, Yang JJ. Metal toxicity and opportunistic binding of Pb(2+) in proteins. Journal of Inorganic Biochemistry. 125: 40-9. PMID 23692958 DOI: 10.1016/j.jinorgbio.2013.04.002  1
2013 Gao X, Wang H, Yang JJ, Chen J, Jie J, Li L, Zhang Y, Liu ZR. Reciprocal regulation of protein kinase and pyruvate kinase activities of pyruvate kinase M2 by growth signals. The Journal of Biological Chemistry. 288: 15971-9. PMID 23576436 DOI: 10.1074/jbc.M112.448753  0.96
2013 Xue S, Qiao J, Pu F, Cameron M, Yang JJ. Design of a novel class of protein-based magnetic resonance imaging contrast agents for the molecular imaging of cancer biomarkers. Wiley Interdisciplinary Reviews. Nanomedicine and Nanobiotechnology. 5: 163-79. PMID 23335551 DOI: 10.1002/wnan.1205  0.96
2013 Wang H, Gao X, Yang JJ, Liu ZR. Interaction between p68 RNA helicase and Ca2+-calmodulin promotes cell migration and metastasis. Nature Communications. 4: 1354. PMID 23322042 DOI: 10.1038/ncomms2345  0.96
2013 Zhou Y, Xue S, Chen Y, Yang JJ. Probing Ca2+-binding capability of viral proteins with the EF-hand motif by grafting approach. Methods in Molecular Biology (Clifton, N.J.). 963: 37-53. PMID 23296603 DOI: 10.1007/978-1-62703-230-8_3  0.96
2013 Zhou Y, Xue S, Yang JJ. Calciomics: integrative studies of Ca2+-binding proteins and their interactomes in biological systems. Metallomics : Integrated Biometal Science. 5: 29-42. PMID 23235533 DOI: 10.1039/c2mt20009k  0.96
2012 Zhao K, Wang X, Wong HC, Wohlhueter R, Kirberger MP, Chen G, Yang JJ. Predicting Ca2+ -binding sites using refined carbon clusters. Proteins. 80: 2666-79. PMID 22821762 DOI: 10.1002/prot.24149  0.88
2012 Hannan FM, Nesbit MA, Zhang C, Cranston T, Curley AJ, Harding B, Fratter C, Rust N, Christie PT, Turner JJ, Lemos MC, Bowl MR, Bouillon R, Brain C, Bridges N, ... ... Yang JJ, et al. Identification of 70 calcium-sensing receptor mutations in hyper- and hypo-calcaemic patients: evidence for clustering of extracellular domain mutations at calcium-binding sites. Human Molecular Genetics. 21: 2768-78. PMID 22422767 DOI: 10.1093/hmg/dds105  0.88
2012 Xu Q, Kopp RF, Chen Y, Yang JJ, Roe MW, Veenstra RD. Gating of connexin 43 gap junctions by a cytoplasmic loop calmodulin binding domain. American Journal of Physiology. Cell Physiology. 302: C1548-56. PMID 22422398 DOI: 10.1152/ajpcell.00319.2011  0.96
2012 Chen Y, Naik SG, Krzystek J, Shin S, Nelson WH, Xue S, Yang JJ, Davidson VL, Liu A. Role of calcium in metalloenzymes: effects of calcium removal on the axial ligation geometry and magnetic properties of the catalytic diheme center in MauG. Biochemistry. 51: 1586-97. PMID 22320333 DOI: 10.1021/bi201575f  0.88
2012 Gao X, Wang H, Yang JJ, Liu X, Liu ZR. Pyruvate kinase M2 regulates gene transcription by acting as a protein kinase. Molecular Cell. 45: 598-609. PMID 22306293 DOI: 10.1016/j.molcel.2012.01.001  0.96
2012 Wang ZM, Tang S, Messi ML, Yang JJ, Delbono O. Residual sarcoplasmic reticulum Ca2+ concentration after Ca2+ release in skeletal myofibers from young adult and old mice. PflüGers Archiv : European Journal of Physiology. 463: 615-24. PMID 22249494 DOI: 10.1007/s00424-012-1073-3  0.88
2012 Li S, Jiang J, Zou J, Qiao J, Xue S, Wei L, Long R, Wang L, Castiblanco A, White N, Ngo J, Mao H, Liu ZR, Yang JJ. PEGylation of protein-based MRI contrast agents improves relaxivities and biocompatibilities. Journal of Inorganic Biochemistry. 107: 111-8. PMID 22178673 DOI: 10.1016/j.jinorgbio.2011.11.004  0.96
2011 Tang S, Wong HC, Wang ZM, Huang Y, Zou J, Zhuo Y, Pennati A, Gadda G, Delbono O, Yang JJ. Design and application of a class of sensors to monitor Ca2+ dynamics in high Ca2+ concentration cellular compartments. Proceedings of the National Academy of Sciences of the United States of America. 108: 16265-70. PMID 21914846 DOI: 10.1073/pnas.1103015108  0.88
2011 Qiao J, Li S, Wei L, Jiang J, Long R, Mao H, Wei L, Wang L, Yang H, Grossniklaus HE, Liu ZR, Yang JJ. HER2 targeted molecular MR imaging using a de novo designed protein contrast agent. Plos One. 6: e18103. PMID 21455310 DOI: 10.1371/journal.pone.0018103  0.96
2011 Chen Y, Zhou Y, Lin X, Wong HC, Xu Q, Jiang J, Wang S, Lurtz MM, Louis CF, Veenstra RD, Yang JJ. Molecular interaction and functional regulation of connexin50 gap junctions by calmodulin. The Biochemical Journal. 435: 711-22. PMID 21320072 DOI: 10.1042/BJ20101726  0.88
2011 Wei L, Li S, Yang J, Ye Y, Zou J, Wang L, Long R, Zurkiya O, Zhao T, Johnson J, Qiao J, Zhou W, Castiblanco A, Maor N, Chen Y, ... ... Yang JJ, et al. Protein-based MRI contrast agents for molecular imaging of prostate cancer. Molecular Imaging and Biology : Mib : the Official Publication of the Academy of Molecular Imaging. 13: 416-23. PMID 20574851 DOI: 10.1007/s11307-010-0342-9  0.72
2010 Huang Y, Zhou Y, Wong HC, Castiblanco A, Chen Y, Brown EM, Yang JJ. Calmodulin regulates Ca2+-sensing receptor-mediated Ca2+ signaling and its cell surface expression. The Journal of Biological Chemistry. 285: 35919-31. PMID 20826781 DOI: 10.1074/jbc.M110.147918  0.96
2010 Jiang J, Zhou Y, Zou J, Chen Y, Patel P, Yang JJ, Balog EM. Site-specific modification of calmodulin Ca²(+) affinity tunes the skeletal muscle ryanodine receptor activation profile. The Biochemical Journal. 432: 89-99. PMID 20815817 DOI: 10.1042/BJ20100505  0.96
2010 Kirberger M, Wang X, Zhao K, Tang S, Chen G, Yang JJ. Integration of Diverse Research Methods to Analyze and Engineer Ca-Binding Proteins: From Prediction to Production. Current Bioinformatics. 5: 68-80. PMID 20802832 DOI: 10.2174/157489310790596358  1
2010 Jiang Y, Huang Y, Wong HC, Zhou Y, Wang X, Yang J, Hall RA, Brown EM, Yang JJ. Elucidation of a novel extracellular calcium-binding site on metabotropic glutamate receptor 1{alpha} (mGluR1{alpha}) that controls receptor activation. The Journal of Biological Chemistry. 285: 33463-74. PMID 20705606 DOI: 10.1074/jbc.M110.147033  0.64
2010 Wang X, Zhao K, Kirberger M, Wong H, Chen G, Yang JJ. Analysis and prediction of calcium-binding pockets from apo-protein structures exhibiting calcium-induced localized conformational changes. Protein Science : a Publication of the Protein Society. 19: 1180-90. PMID 20512971 DOI: 10.1002/pro.394  1
2010 Zhou Y, Tzeng WP, Wong HC, Ye Y, Jiang J, Chen Y, Huang Y, Suppiah S, Frey TK, Yang JJ. Calcium-dependent association of calmodulin with the rubella virus nonstructural protease domain. The Journal of Biological Chemistry. 285: 8855-68. PMID 20086014 DOI: 10.1074/jbc.M109.097063  0.96
2009 Maniccia AW, Yang W, Johnson JA, Li S, Tjong H, Zhou HX, Shaket LA, Yang JJ. Inverse tuning of metal binding affinity and protein stability by altering charged coordination residues in designed calcium binding proteins. Pmc Biophysics. 2: 11. PMID 20025729 DOI: 10.1186/1757-5036-2-11  0.92
2009 Huang Y, Zhou Y, Wong HC, Chen Y, Chen Y, Wang S, Castiblanco A, Liu A, Yang JJ. A single EF-hand isolated from STIM1 forms dimer in the absence and presence of Ca2+. The Febs Journal. 276: 5589-97. PMID 19694801 DOI: 10.1111/j.1742-4658.2009.07240.x  0.96
2009 Chen N, Huang Y, Yang L, Liu R, Yang JJ. Designing caspase-3 sensors for imaging of apoptosis in living cells. Chemistry (Weinheim An Der Bergstrasse, Germany). 15: 9311-4. PMID 19655355 DOI: 10.1002/chem.200901439  0.92
2009 Zhou Y, Frey TK, Yang JJ. Viral calciomics: interplays between Ca2+ and virus. Cell Calcium. 46: 1-17. PMID 19535138 DOI: 10.1016/j.ceca.2009.05.005  0.96
2009 Chen N, Ye Y, Zou J, Li S, Wang S, Martin A, Wohlhueter R, Yang JJ. Fluorescence complementation via EF-hand interactions. Journal of Biotechnology. 142: 205-13. PMID 19500621 DOI: 10.1016/j.jbiotec.2009.05.007  0.88
2009 Holder AN, Ellis AL, Zou J, Chen N, Yang JJ. Facilitating chromophore formation of engineered Ca(2+) binding green fluorescent proteins. Archives of Biochemistry and Biophysics. 486: 27-34. PMID 19358822 DOI: 10.1016/  0.88
2009 Zhou Y, Yang W, Lurtz MM, Chen Y, Jiang J, Huang Y, Louis CF, Yang JJ. Calmodulin mediates the Ca2+-dependent regulation of Cx44 gap junctions. Biophysical Journal. 96: 2832-48. PMID 19348766 DOI: 10.1016/j.bpj.2008.12.3941  0.88
2009 Chen N, Zou J, Wang S, Ye Y, Huang Y, Gadda G, Yang JJ. Designing protease sensors for real-time imaging of trypsin activation in pancreatic cancer cells. Biochemistry. 48: 3519-26. PMID 19271729 DOI: 10.1021/bi802289v  0.88
2009 Huang Y, Zhou Y, Castiblanco A, Yang W, Brown EM, Yang JJ. Multiple Ca(2+)-binding sites in the extracellular domain of the Ca(2+)-sensing receptor corresponding to cooperative Ca(2+) response. Biochemistry. 48: 388-98. PMID 19102677 DOI: 10.1021/bi8014604  0.96
2009 Wang X, Kirberger M, Qiu F, Chen G, Yang JJ. Towards predicting Ca2+-binding sites with different coordination numbers in proteins with atomic resolution. Proteins. 75: 787-98. PMID 19003991 DOI: 10.1002/prot.22285  1
2009 Zhou Y, Tzeng WP, Ye Y, Huang Y, Li S, Chen Y, Frey TK, Yang JJ. A cysteine-rich metal-binding domain from rubella virus non-structural protein is essential for viral protease activity and virus replication. The Biochemical Journal. 417: 477-83. PMID 18795894 DOI: 10.1042/BJ20081468  0.96
2008 Li S, Yang W, Maniccia AW, Barrow D, Tjong H, Zhou HX, Yang JJ. Rational design of a conformation-switchable Ca2+- and Tb3+-binding protein without the use of multiple coupled metal-binding sites. The Febs Journal. 275: 5048-61. PMID 18785925 DOI: 10.1111/j.1742-4658.2008.06638.x  0.92
2008 Kirberger M, Yang JJ. Structural differences between Pb2+- and Ca2+-binding sites in proteins: implications with respect to toxicity. Journal of Inorganic Biochemistry. 102: 1901-9. PMID 18684507 DOI: 10.1016/j.jinorgbio.2008.06.014  1
2008 Kirberger M, Wang X, Deng H, Yang W, Chen G, Yang JJ. Statistical analysis of structural characteristics of protein Ca2+-binding sites. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 13: 1169-81. PMID 18594878 DOI: 10.1007/s00775-008-0402-7  1
2008 Yang JJ, Yang J, Wei L, Zurkiya O, Yang W, Li S, Zou J, Zhou Y, Maniccia AL, Mao H, Zhao F, Malchow R, Zhao S, Johnson J, Hu X, et al. Rational design of protein-based MRI contrast agents. Journal of the American Chemical Society. 130: 9260-7. PMID 18576649 DOI: 10.1021/ja800736h  0.72
2008 Jones LM, Yang W, Maniccia AW, Harrison A, van der Merwe PA, Yang JJ. Rational design of a novel calcium-binding site adjacent to the ligand-binding site on CD2 increases its CD48 affinity. Protein Science : a Publication of the Protein Society. 17: 439-49. PMID 18287277 DOI: 10.1110/ps.073328208  0.88
2007 Zou J, Hofer AM, Lurtz MM, Gadda G, Ellis AL, Chen N, Huang Y, Holder A, Ye Y, Louis CF, Welshhans K, Rehder V, Yang JJ. Developing sensors for real-time measurement of high Ca2+ concentrations. Biochemistry. 46: 12275-88. PMID 17924653 DOI: 10.1021/bi7007307  0.88
2007 Zhou Y, Yang W, Lurtz MM, Ye Y, Huang Y, Lee HW, Chen Y, Louis CF, Yang JJ. Identification of the calmodulin binding domain of connexin 43. The Journal of Biological Chemistry. 282: 35005-17. PMID 17901047 DOI: 10.1074/jbc.M707728200  0.88
2007 Huang Y, Zhou Y, Yang W, Butters R, Lee HW, Li S, Castiblanco A, Brown EM, Yang JJ. Identification and dissection of Ca(2+)-binding sites in the extracellular domain of Ca(2+)-sensing receptor. The Journal of Biological Chemistry. 282: 19000-10. PMID 17478419 DOI: 10.1074/jbc.M701096200  0.96
2007 Liu Y, Tong Q, Zhou Y, Lee HW, Yang JJ, Bühring HJ, Chen YT, Ha B, Chen CX, Yang Y, Zen K. Functional elements on SIRPalpha IgV domain mediate cell surface binding to CD47. Journal of Molecular Biology. 365: 680-93. PMID 17070842 DOI: 10.1016/j.jmb.2006.09.079  0.96
2006 Zhou Y, Yang W, Kirberger M, Lee HW, Ayalasomayajula G, Yang JJ. Prediction of EF-hand calcium-binding proteins and analysis of bacterial EF-hand proteins. Proteins. 65: 643-55. PMID 16981205 DOI: 10.1002/prot.21139  1
2006 Maniccia AW, Yang W, Li SY, Johnson JA, Yang JJ. Using protein design to dissect the effect of charged residues on metal binding and protein stability. Biochemistry. 45: 5848-56. PMID 16669627 DOI: 10.1021/bi052508q  0.88
2006 Deng H, Chen G, Yang W, Yang JJ. Predicting calcium-binding sites in proteins - a graph theory and geometry approach. Proteins. 64: 34-42. PMID 16617426 DOI: 10.1002/prot.20973  0.88
2006 Carroll A, Yang W, Ye Y, Simmons R, Yang JJ. Amyloid fibril formation by a domain of rat cell adhesion molecule. Cell Biochemistry and Biophysics. 44: 241-9. PMID 16456226 DOI: 10.1385/CBB:44:2:241  0.92
2005 Lin C, Yang L, Yang JJ, Huang Y, Liu ZR. ATPase/helicase activities of p68 RNA helicase are required for pre-mRNA splicing but not for assembly of the spliceosome. Molecular and Cellular Biology. 25: 7484-93. PMID 16107697 DOI: 10.1128/MCB.25.17.7484-7493.2005  0.96
2005 Yang W, Wilkins AL, Li S, Ye Y, Yang JJ. The effects of Ca2+ binding on the dynamic properties of a designed Ca2+-binding protein. Biochemistry. 44: 8267-73. PMID 15938616 DOI: 10.1021/bi050463n  0.92
2005 Zou J, Ye Y, Welshhans K, Lurtz M, Ellis AL, Louis C, Rehder V, Yang JJ. Expression and optical properties of green fluorescent protein expressed in different cellular environments. Journal of Biotechnology. 119: 368-78. PMID 15935502 DOI: 10.1016/j.jbiotec.2005.04.001  0.88
2005 Ye Y, Lee HW, Yang W, Yang JJ. Calcium and lanthanide affinity of the EF-loops from the C-terminal domain of calmodulin. Journal of Inorganic Biochemistry. 99: 1376-83. PMID 15917089 DOI: 10.1016/j.jinorgbio.2005.03.011  0.92
2005 Ye Y, Lee HW, Yang W, Shealy S, Yang JJ. Probing site-specific calmodulin calcium and lanthanide affinity by grafting. Journal of the American Chemical Society. 127: 3743-50. PMID 15771508 DOI: 10.1021/ja042786x  0.92
2005 Yang W, Wilkins AL, Ye Y, Liu ZR, Li SY, Urbauer JL, Hellinga HW, Kearney A, van der Merwe PA, Yang JJ. Design of a calcium-binding protein with desired structure in a cell adhesion molecule. Journal of the American Chemical Society. 127: 2085-93. PMID 15713084 DOI: 10.1021/ja0431307  0.88
2003 Yang JJ, Gawthrop A, Ye Y. Obtaining site-specific calcium-binding affinities of calmodulin. Protein and Peptide Letters. 10: 331-45. PMID 14529487  0.92
2003 Ye Y, Shealy S, Lee HW, Torshin I, Harrison R, Yang JJ. A grafting approach to obtain site-specific metal-binding properties of EF-hand proteins. Protein Engineering. 16: 429-34. PMID 12874376  0.92
2003 Yang W, Jones LM, Isley L, Ye Y, Lee HW, Wilkins A, Liu ZR, Hellinga HW, Malchow R, Ghazi M, Yang JJ. Rational design of a calcium-binding protein. Journal of the American Chemical Society. 125: 6165-71. PMID 12785848 DOI: 10.1021/ja034724x  0.88
2002 Ellis AL, Christian Mason J, Lee HW, Strekowski L, Patonay G, Choi H, Yang JJ. Design, synthesis, and characterization of a calcium-sensitive near infrared dye. Talanta. 56: 1099-107. PMID 18968590 DOI: 10.1016/S0039-9140(01)00641-5  0.88
2002 Wilkins AL, Ye Y, Yang W, Lee HW, Liu ZR, Yang JJ. Metal-binding studies for a de novo designed calcium-binding protein. Protein Engineering. 15: 571-4. PMID 12200539  0.96
2002 Lee HW, Yang W, Ye Y, Liu ZR, Glushka J, Yang JJ. Isolated EF-loop III of calmodulin in a scaffold protein remains unpaired in solution using pulsed-field-gradient NMR spectroscopy. Biochimica Et Biophysica Acta. 1598: 80-7. PMID 12147347  0.96
2002 Yang W, Lee HW, Hellinga H, Yang JJ. Structural analysis, identification, and design of calcium-binding sites in proteins. Proteins. 47: 344-56. PMID 11948788 DOI: 10.1002/prot.10093  0.88
2002 Yang JJ, Yang H, Ye Y, Hopkins H, Hastings G. Temperature-induced formation of a non-native intermediate state of the all beta-sheet protein CD2. Cell Biochemistry and Biophysics. 36: 1-18. PMID 11939369 DOI: 10.1385/CBB:36:1:01  0.92
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