| Year |
Citation |
Score |
| 2019 |
Bowman SEJ, Backman LRF, Bjork RE, Andorfer MC, Yori S, Caruso A, Stultz CM, Drennan CL. Solution structure and biochemical characterization of a spare part protein that restores activity to an oxygen-damaged glycyl radical enzyme. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. PMID 31250200 DOI: 10.1007/s00775-019-01681-2 |
0.321 |
|
| 2017 |
Burger VM, Vandervelde A, Hendrix J, Konijnenberg A, Sobott F, Loris R, Stultz CM. Hidden states within disordered regions of the CcdA antitoxin protein. Journal of the American Chemical Society. PMID 28124913 DOI: 10.1021/Jacs.6B11450 |
0.38 |
|
| 2016 |
Burger VM, Arenas DJ, Stultz CM. A Structure-free Method for Quantifying Conformational Flexibility in proteins. Scientific Reports. 6: 29040. PMID 27358108 DOI: 10.1038/Srep29040 |
0.36 |
|
| 2016 |
Ziegler Z, Schmidt M, Gurry T, Burger V, Stultz CM. Mollack: a web server for the automated creation of conformational ensembles for intrinsically disordered proteins. Bioinformatics (Oxford, England). PMID 27153636 DOI: 10.1093/Bioinformatics/Btw200 |
0.346 |
|
| 2016 |
Burger VM, Nolasco DO, Stultz CM. Expanding the Range of Protein Function at the Far end of the Order-Structure Continuum. The Journal of Biological Chemistry. PMID 26851282 DOI: 10.1074/Jbc.R115.692590 |
0.334 |
|
| 2016 |
Gurry T, Fisher CK, Schmidt M, Stultz CM. Analyzing Ensembles of Amyloid Proteins Using Bayesian Statistics. Methods in Molecular Biology (Clifton, N.J.). 1345: 269-80. PMID 26453218 DOI: 10.1007/978-1-4939-2978-8_17 |
0.391 |
|
| 2016 |
Burger VM, Konijnenberg A, Vanderwelde A, Sobott F, Loris R, Stultz CM. Probing the Conformational Ensemble of a Bacterial Antitoxin through Molecular Dynamics Simulations and Mass Spectrometry Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.2982 |
0.389 |
|
| 2014 |
Gurry T, Stultz CM. Mechanism of amyloid-β fibril elongation Biochemistry. 53: 6981-6991. PMID 25330398 DOI: 10.1021/Bi500695G |
0.308 |
|
| 2014 |
Zhong C, Gurry T, Cheng AA, Downey J, Deng Z, Stultz CM, Lu TK. Strong underwater adhesives made by self-assembling multi-protein nanofibres. Nature Nanotechnology. 9: 858-66. PMID 25240674 DOI: 10.1038/Nnano.2014.199 |
0.307 |
|
| 2014 |
Burger VM, Gurry T, Stultz CM. Intrinsically disordered proteins: Where computation meets experiment Polymers. 6: 2684-2719. DOI: 10.3390/Polym6102684 |
0.341 |
|
| 2014 |
Ullman O, Zimanyi CM, Drennan CL, Stultz CM. Finding the Missing Link - Modeling the Conformational Space of the Active and Inactive forms of E. Coli Ribonucleotide Reductase Biophysical Journal. 106: 52a. DOI: 10.1016/J.Bpj.2013.11.368 |
0.336 |
|
| 2014 |
Gurry T, Stultz CM. The Mechanism of Amyloid-β42 Fibril Elongation Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.2721 |
0.344 |
|
| 2013 |
Gee EP, Yüksel D, Stultz CM, Ingber DE. SLLISWD sequence in the 10FNIII domain initiates fibronectin fibrillogenesis. The Journal of Biological Chemistry. 288: 21329-40. PMID 23740248 DOI: 10.1074/Jbc.M113.462077 |
0.728 |
|
| 2013 |
Fisher CK, Ullman O, Stultz CM. Comparative studies of disordered proteins with similar sequences: Application to Aβ40 and Aβ42 Biophysical Journal. 104: 1546-1555. PMID 23561531 DOI: 10.1016/J.Bpj.2013.02.023 |
0.358 |
|
| 2013 |
Lu KG, Stultz CM. Insight into the degradation of type-I collagen fibrils by MMP-8 Journal of Molecular Biology. 425: 1815-1825. PMID 23399546 DOI: 10.1016/J.Jmb.2013.02.002 |
0.442 |
|
| 2013 |
Gurry T, Ullman O, Fisher CK, Perovic I, Pochapsky T, Stultz CM. The dynamic structure of α-synuclein multimers Journal of the American Chemical Society. 135: 3865-3872. PMID 23398399 DOI: 10.1021/Ja310518P |
0.369 |
|
| 2012 |
Walker S, Ullman O, Stultz CM. Using intramolecular disulfide bonds in tau protein to deduce structural features of aggregation-resistant conformations Journal of Biological Chemistry. 287: 9591-9600. PMID 22291015 DOI: 10.1074/Jbc.M111.336107 |
0.363 |
|
| 2012 |
Lu KG, Stultz CM. Elucidating the Mechanism of Collagenolysis in the Native Collagen Fibril Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.2600 |
0.413 |
|
| 2012 |
Bowman S, Drennan CL, Stultz CM. Probing the Nickel Coordination Environment in Helicobacter Pylori NikR Biophysical Journal. 102: 252a. DOI: 10.1016/J.Bpj.2011.11.1390 |
0.359 |
|
| 2011 |
Ullman O, Fisher CK, Stultz CM. Explaining the structural plasticity of α-synuclein Journal of the American Chemical Society. 133: 19536-19546. PMID 22029383 DOI: 10.1021/Ja208657Z |
0.357 |
|
| 2011 |
Fisher CK, Stultz CM. Protein structure along the order - Disorder continuum Journal of the American Chemical Society. 133: 10022-10025. PMID 21650183 DOI: 10.1021/Ja203075P |
0.352 |
|
| 2011 |
Fisher CK, Stultz CM. Constructing ensembles for intrinsically disordered proteins Current Opinion in Structural Biology. 21: 426-431. PMID 21530234 DOI: 10.1016/J.Sbi.2011.04.001 |
0.339 |
|
| 2011 |
Ullman O, Stultz CM. Modeling Alpha-Synuclein Ensemble Using Bayesian Weighting Algorithm Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.545 |
0.313 |
|
| 2011 |
Fisher CK, Stultz CM. Characterizing Order and Disorder of Protein Structural Ensembles Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.2214 |
0.371 |
|
| 2010 |
Chen MM, Bartlett AI, Nerenberg PS, Friel CT, Hackenberger CP, Stultz CM, Radford SE, Imperiali B. Perturbing the folding energy landscape of the bacterial immunity protein Im7 by site-specific N-linked glycosylation. Proceedings of the National Academy of Sciences of the United States of America. 107: 22528-33. PMID 21148421 DOI: 10.1073/Pnas.1015356107 |
0.716 |
|
| 2010 |
Fisher CK, Huang A, Stultz CM. Modeling intrinsically disordered proteins with Bayesian statistics Journal of the American Chemical Society. 132: 14919-14927. PMID 20925316 DOI: 10.1021/Ja105832G |
0.361 |
|
| 2010 |
Phillips CM, Stultz CM, Drennan CL. Searching for the Nik operon: how a ligand-responsive transcription factor hunts for its DNA binding site. Biochemistry. 49: 7757-63. PMID 20712334 DOI: 10.1021/Bi100947K |
0.309 |
|
| 2010 |
Phillips CM, Schreiter ER, Stultz CM, Drennan CL. Structural basis of low-affinity nickel binding to the nickel-responsive transcription factor NikR from Escherichia coli. Biochemistry. 49: 7830-8. PMID 20704276 DOI: 10.1021/Bi100923J |
0.358 |
|
| 2010 |
Gurry T, Nerenberg PS, Stultz CM. The contribution of interchain salt bridges to triple-helical stability in collagen Biophysical Journal. 98: 2634-2643. PMID 20513408 DOI: 10.1016/J.Bpj.2010.01.065 |
0.702 |
|
| 2010 |
Salsas-Escat R, Nerenberg PS, Stultz CM. Cleavage site specificity and conformational selection in type i collagen degradation Biochemistry. 49: 4147-4158. PMID 20394413 DOI: 10.1021/Bi9021473 |
0.699 |
|
| 2010 |
Salsas-Escat R, Stultz CM. Conformational selection and collagenolysis in Type III collagen Proteins: Structure, Function and Bioinformatics. 78: 325-335. PMID 19731369 DOI: 10.1002/Prot.22545 |
0.435 |
|
| 2009 |
Huang A, Stultz CM. Finding order within disorder: Elucidating the structure of proteins associated with neurodegenerative disease Future Medicinal Chemistry. 1: 467-482. PMID 21426127 DOI: 10.4155/Fmc.09.40 |
0.371 |
|
| 2009 |
Phillips CM, Nerenberg PS, Drennan CL, Stultz CM. Physical basis of metal-binding specificity in Escherichia coli NikR. Journal of the American Chemical Society. 131: 10220-8. PMID 19621966 DOI: 10.1021/Ja9026314 |
0.695 |
|
| 2009 |
Schubert CR, Stultz CM. The multi-copy simultaneous search methodology: A fundamental tool for structure-based drug design Journal of Computer-Aided Molecular Design. 23: 475-489. PMID 19506805 DOI: 10.1007/S10822-009-9287-Y |
0.301 |
|
| 2009 |
Yoon MK, Venkatachalam V, Huang A, Choi BS, Stultz CM, Chou JJ. Residual structure within the disordered C-terminal segment of p21(Waf1/Cip1/Sdi1) and its implications for molecular recognition. Protein Science : a Publication of the Protein Society. 18: 337-47. PMID 19165719 DOI: 10.1002/Pro.34 |
0.421 |
|
| 2009 |
Salsas-Escat R, Stultz CM. Active Unfolding of Collagen is not Required for Collagenolysis to Occur in Solution Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.914 |
0.437 |
|
| 2009 |
Phillips CM, Nerenberg PS, Drennan CL, Stultz CM. Metal Preference At The Second Metal Binding Site Of E. coli NikR Biophysical Journal. 96: 58a. DOI: 10.1016/J.Bpj.2008.12.196 |
0.684 |
|
| 2009 |
Salsas-Escat R, Stultz CM. The molecular mechanics of collagen degradation: Implications for human disease Experimental Mechanics. 49: 65-77. DOI: 10.1007/S11340-007-9105-1 |
0.373 |
|
| 2008 |
Gee EP, Ingber DE, Stultz CM. Fibronectin unfolding revisited: modeling cell traction-mediated unfolding of the tenth type-III repeat. Plos One. 3: e2373. PMID 19020673 DOI: 10.1371/Journal.Pone.0002373 |
0.728 |
|
| 2008 |
Huang A, Stultz CM. The effect of a ΔK280 mutation on the unfolded state of a microtubule-binding repeat in tau Plos Computational Biology. 4. PMID 18725924 DOI: 10.1371/Journal.Pcbi.1000155 |
0.417 |
|
| 2008 |
Nerenberg PS, Stultz CM. Differential Unfolding of α1 and α2 Chains in Type I Collagen and Collagenolysis Journal of Molecular Biology. 382: 246-256. PMID 18644377 DOI: 10.1016/J.Jmb.2008.07.009 |
0.693 |
|
| 2008 |
Nerenberg PS, Salsas-Escat R, Stultz CM. Do collagenases unwind triple-helical collagen before peptide bond hydrolysis? Reinterpreting experimental observations with mathematical models Proteins: Structure, Function and Genetics. 70: 1154-1161. PMID 17932911 DOI: 10.1002/Prot.21687 |
0.719 |
|
| 2007 |
Nerenberg PS, Salsas-Escat R, Stultz CM. Collagen - A necessary accomplice in the metastatic process Cancer Genomics and Proteomics. 4: 319-328. PMID 17993716 |
0.659 |
|
| 2007 |
Thomas AH, Edelman ER, Stultz CM. Collagen fragments modulate innate immunity. Experimental Biology and Medicine (Maywood, N.J.). 232: 406-11. PMID 17327474 DOI: 10.3181/00379727-232-2320406 |
0.477 |
|
| 2007 |
Huang A, Stultz CM. Conformational sampling with implicit solvent models: Application to the PHF6 peptide in tau protein Biophysical Journal. 92: 34-45. PMID 17040986 DOI: 10.1529/Biophysj.106.091207 |
0.354 |
|
| 2006 |
Stultz CM. The folding mechanism of collagen-like model peptides explored through detailed molecular simulations Protein Science. 15: 2166-2177. PMID 16943446 DOI: 10.1110/Ps.062124606 |
0.449 |
|
| 2004 |
Stultz CM. An assessment of potential of mean force calculations with implicit solvent models Journal of Physical Chemistry B. 108: 16525-16532. DOI: 10.1021/Jp047126T |
0.337 |
|
| 2003 |
Stultz CM, Edelman ER. A structural model that explains the effects of hyperglycemia on collagenolysis. Biophysical Journal. 85: 2198-204. PMID 14507685 DOI: 10.1016/S0006-3495(03)74645-1 |
0.551 |
|
| 2002 |
Stultz CM, Levin AD, Edelman ER. Phosphorylation-induced conformational changes in a mitogen-activated protein kinase substrate. Implications for tyrosine hydroxylase activation. The Journal of Biological Chemistry. 277: 47653-61. PMID 12361946 DOI: 10.1074/Jbc.M208755200 |
0.511 |
|
| 2002 |
Stultz CM. Localized unfolding of collagen explains collagenase cleavage near imino-poor sites Journal of Molecular Biology. 319: 997-1003. PMID 12079342 DOI: 10.1016/S0022-2836(02)00421-7 |
0.421 |
|
| 2000 |
Stultz CM, Karplus M. Dynamic ligand design and combinatorial optimization: designing inhibitors to endothiapepsin. Proteins. 40: 258-89. PMID 10842341 DOI: 10.1002/(Sici)1097-0134(20000801)40:2<258::Aid-Prot80>3.0.Co;2-I |
0.469 |
|
| 1999 |
Stultz CM, Karplus M. MCSS functionality maps for a flexible protein. Proteins. 37: 512-29. PMID 10651268 DOI: 10.1002/(Sici)1097-0134(19991201)37:4<512::Aid-Prot3>3.0.Co;2-O |
0.498 |
|
| 1998 |
Stultz CM, Karplus M. On the potential surface of the locally enhanced sampling approximation Journal of Chemical Physics. 109: 8809-8815. DOI: 10.1063/1.477551 |
0.397 |
|
| 1997 |
Stultz CM, Nambudripad R, Lathrop RH, White JV. Predicting Protein Structure With Probabilistic Models Advances in Molecular and Cell Biology. 22: 447-506. DOI: 10.1016/S1569-2558(08)60483-X |
0.348 |
|
| 1994 |
White JV, Stultz CM, Smith TF. Protein classification by stochastic modeling and optimal filtering of amino-acid sequences Mathematical Biosciences. 119: 35-75. PMID 8111135 DOI: 10.1016/0025-5564(94)90004-3 |
0.323 |
|
| 1993 |
Stultz CM, White JV, Smith TF. Structural analysis based on state-space modeling Protein Science. 2: 305-314. PMID 8453370 DOI: 10.1002/Pro.5560020302 |
0.343 |
|
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