| Year |
Citation |
Score |
| 2019 |
Coelho Graça D, Hartmer R, Jabs W, Scherl A, Clerici L, Samii K, Tsybin YO, Hochstrasser D, Lescuyer P. Detection of Proteoforms Using Top-Down Mass Spectrometry and Diagnostic Ions. Methods in Molecular Biology (Clifton, N.J.). 1959: 173-183. PMID 30852823 DOI: 10.1007/978-1-4939-9164-8_12 |
0.476 |
|
| 2016 |
Acosta-Martin AE, Antinori P, Uppugunduri CR, Daali Y, Ansari M, Scherl A, Müller M, Lescuyer P. Detection of busulfan adducts on proteins. Rapid Communications in Mass Spectrometry : Rcm. PMID 27599297 DOI: 10.1002/rcm.7730 |
0.386 |
|
| 2015 |
Campos A, Díaz R, Martínez-Bartolomé S, Sierra J, Gallardo O, Sabidó E, López-Lucendo M, Ignacio Casal J, Pasquarello C, Scherl A, Chiva C, Borras E, Odena A, Elortza F, Azkargorta M, et al. Multicenter experiment for quality control of peptide-centric LC-MS/MS analysis - A longitudinal performance assessment with nLC coupled to orbitrap MS analyzers. Journal of Proteomics. PMID 25982386 DOI: 10.1016/j.jprot.2015.05.012 |
0.366 |
|
| 2015 |
Graça DC, Hartmer R, Jabs W, Beris P, Clerici L, Stoermer C, Samii K, Hochstrasser D, Tsybin YO, Scherl A, Lescuyer P. Identification of hemoglobin variants by top-down mass spectrometry using selected diagnostic product ions. Analytical and Bioanalytical Chemistry. 407: 2837-45. PMID 25753013 DOI: 10.1007/s00216-015-8525-5 |
0.394 |
|
| 2015 |
Scherl A. Clinical protein mass spectrometry. Methods (San Diego, Calif.). 81: 3-14. PMID 25752846 DOI: 10.1016/j.ymeth.2015.02.015 |
0.446 |
|
| 2013 |
Pak H, Nikitin F, Gluck F, Lisacek F, Scherl A, Muller M. Clustering and filtering tandem mass spectra acquired in data-independent mode. Journal of the American Society For Mass Spectrometry. 24: 1862-71. PMID 24006250 DOI: 10.1007/s13361-013-0720-z |
0.465 |
|
| 2013 |
Acosta-Martin AE, Graça DC, Antinori P, Clerici L, Hartmer R, Meyer M, Hochstrasser D, Samii K, Lescuyer P, Scherl A. Quantitative mass spectrometry analysis of intact hemoglobin A2 by precursor ion isolation and detection. Analytical Chemistry. 85: 7971-5. PMID 23883289 DOI: 10.1021/ac401782t |
0.437 |
|
| 2013 |
Bouchal P, Dvorakova M, Scherl A, Garbis SD, Nenutil R, Vojtesek B. Intact protein profiling in breast cancer biomarker discovery: protein identification issue and the solutions based on 3D protein separation, bottom-up and top-down mass spectrometry. Proteomics. 13: 1053-8. PMID 23303686 DOI: 10.1002/Pmic.201200121 |
0.431 |
|
| 2013 |
Gluck F, Hoogland C, Antinori P, Robin X, Nikitin F, Zufferey A, Pasquarello C, Fétaud V, Dayon L, Müller M, Lisacek F, Geiser L, Hochstrasser D, Sanchez JC, Scherl A. EasyProt--an easy-to-use graphical platform for proteomics data analysis. Journal of Proteomics. 79: 146-60. PMID 23277275 DOI: 10.1016/j.jprot.2012.12.012 |
0.491 |
|
| 2013 |
Lehmann S, Hoofnagle A, Hochstrasser D, Brede C, Glueckmann M, Cocho JA, Ceglarek U, Lenz C, Vialaret J, Scherl A, Hirtz C. Quantitative Clinical Chemistry Proteomics (qCCP) using mass spectrometry: general characteristics and application. Clinical Chemistry and Laboratory Medicine : Cclm / Fescc. 51: 919-35. PMID 23183755 DOI: 10.1515/cclm-2012-0723 |
0.463 |
|
| 2012 |
Coelho Graça D, Lescuyer P, Clerici L, Tsybin YO, Hartmer R, Meyer M, Samii K, Hochstrasser DF, Scherl A. Electron transfer dissociation mass spectrometry of hemoglobin on clinical samples. Journal of the American Society For Mass Spectrometry. 23: 1750-6. PMID 22869297 DOI: 10.1007/s13361-012-0446-3 |
0.484 |
|
| 2011 |
Ahrné E, Ohta Y, Nikitin F, Scherl A, Lisacek F, Müller M. An improved method for the construction of decoy peptide MS/MS spectra suitable for the accurate estimation of false discovery rates. Proteomics. 11: 4085-95. PMID 21898822 DOI: 10.1002/pmic.201000665 |
0.319 |
|
| 2011 |
Nguyen-Lefebvre AT, Gonin-Giraud S, Scherl A, Arboit P, Granger L, Sanchez JC, Diaz JJ, Gandrillon O, Madjar JJ. Identification of human, rat and chicken ribosomal proteins by a combination of two-dimensional polyacrylamide gel electrophoresis and mass spectrometry. Journal of Proteomics. 74: 167-85. PMID 21055487 DOI: 10.1016/j.jprot.2010.10.007 |
0.38 |
|
| 2011 |
Scherl A, Pak H, Pasquarello C. Label-free protein quantification on tandem mass spectra acquired in a data-independent mode provides accurate measurements over five orders of concentration magnitude in complex matrices Journal of Integrated Omics. 1. DOI: 10.5584/JIOMICS.V1I2.45 |
0.375 |
|
| 2010 |
Dayon L, Turck N, Scherl A, Hochstrasser DF, Burkhard PR, Sanchez JC. From relative to absolute quantification of tryptic peptides with tandem mass tags: application to cerebrospinal fluid. Chimia. 64: 132-5. PMID 21140904 DOI: 10.2533/chimia.2010.132 |
0.534 |
|
| 2010 |
Kim JH, Stevens RC, MacCoss MJ, Goodlett DR, Scherl A, Richter RJ, Suzuki SM, Furlong CE. Identification and characterization of biomarkers of organophosphorus exposures in humans. Advances in Experimental Medicine and Biology. 660: 61-71. PMID 20221871 DOI: 10.1007/978-1-60761-350-3_7 |
0.523 |
|
| 2010 |
Dayon L, Turck N, Kienle S, Schulz-Knappe P, Hochstrasser DF, Scherl A, Sanchez JC. Isobaric tagging-based selection and quantitation of cerebrospinal fluid tryptic peptides with reporter calibration curves. Analytical Chemistry. 82: 848-58. PMID 20058875 DOI: 10.1021/ac901854k |
0.513 |
|
| 2010 |
Priego-Capote F, Scherl A, Müller M, Waridel P, Lisacek F, Sanchez JC. Glycation isotopic labeling with 13C-reducing sugars for quantitative analysis of glycated proteins in human plasma. Molecular & Cellular Proteomics : McP. 9: 579-92. PMID 19955080 DOI: 10.1074/mcp.M900439-MCP200 |
0.394 |
|
| 2010 |
Dayon L, Pasquarello C, Hoogland C, Sanchez JC, Scherl A. Combining low- and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags. Journal of Proteomics. 73: 769-77. PMID 19903544 DOI: 10.1016/j.jprot.2009.10.015 |
0.541 |
|
| 2009 |
Tsai YS, Scherl A, Shaw JL, MacKay CL, Shaffer SA, Langridge-Smith PR, Goodlett DR. Precursor ion independent algorithm for top-down shotgun proteomics. Journal of the American Society For Mass Spectrometry. 20: 2154-66. PMID 19773183 DOI: 10.1016/J.Jasms.2009.07.024 |
0.707 |
|
| 2009 |
Panchaud A, Scherl A, Shaffer SA, von Haller PD, Kulasekara HD, Miller SI, Goodlett DR. Precursor acquisition independent from ion count: how to dive deeper into the proteomics ocean. Analytical Chemistry. 81: 6481-8. PMID 19572557 DOI: 10.1021/Ac900888S |
0.675 |
|
| 2008 |
Singh P, Shaffer SA, Scherl A, Holman C, Pfuetzner RA, Larson Freeman TJ, Miller SI, Hernandez P, Appel RD, Goodlett DR. Characterization of protein cross-links via mass spectrometry and an open-modification search strategy. Analytical Chemistry. 80: 8799-806. PMID 18947195 DOI: 10.1021/Ac801646F |
0.685 |
|
| 2008 |
Scherl A, Tsai YS, Shaffer SA, Goodlett DR. Increasing information from shotgun proteomic data by accounting for misassigned precursor ion masses. Proteomics. 8: 2791-7. PMID 18655048 DOI: 10.1002/Pmic.200800045 |
0.685 |
|
| 2008 |
Scherl A, Shaffer SA, Taylor GK, Hernandez P, Appel RD, Binz PA, Goodlett DR. On the benefits of acquiring peptide fragment ions at high measured mass accuracy. Journal of the American Society For Mass Spectrometry. 19: 891-901. PMID 18417358 DOI: 10.1016/J.Jasms.2008.02.005 |
0.68 |
|
| 2008 |
Scherl A, Shaffer SA, Taylor GK, Kulasekara HD, Miller SI, Goodlett DR. Genome-specific gas-phase fractionation strategy for improved shotgun proteomic profiling of proteotypic peptides. Analytical Chemistry. 80: 1182-91. PMID 18211032 DOI: 10.1021/Ac701680F |
0.639 |
|
| 2006 |
Nunn BL, Shaffer SA, Scherl A, Gallis B, Wu M, Miller SI, Goodlett DR. Comparison of a Salmonella typhimurium proteome defined by shotgun proteomics directly on an LTQ-FT and by proteome pre-fractionation on an LCQ-DUO. Briefings in Functional Genomics & Proteomics. 5: 154-68. PMID 16798750 DOI: 10.1093/Bfgp/Ell024 |
0.594 |
|
| 2005 |
Scherl A, Zimmermann-Ivol CG, Di Dio J, Vaezzadeh AR, Binz PA, Amez-Droz M, Cochard R, Sanchez JC, Glückmann M, Hochstrasser DF. Gold coating of non-conductive membranes before matrix-assisted laser desorption/ionization tandem mass spectrometric analysis prevents charging effect. Rapid Communications in Mass Spectrometry : Rcm. 19: 605-10. PMID 15685683 DOI: 10.1002/rcm.1831 |
0.38 |
|
| 2005 |
Scherl A, François P, Bento M, Deshusses JM, Charbonnier Y, Converset V, Huyghe A, Walter N, Hoogland C, Appel RD, Sanchez JC, Zimmermann-Ivol CG, Corthals GL, Hochstrasser DF, Schrenzel J. Correlation of proteomic and transcriptomic profiles of Staphylococcus aureus during the post-exponential phase of growth. Journal of Microbiological Methods. 60: 247-57. PMID 15590099 DOI: 10.1016/j.mimet.2004.09.017 |
0.39 |
|
| 2004 |
Scherl A, Francois P, Converset V, Bento M, Burgess JA, Sanchez JC, Hochstrasser DF, Schrenzel J, Corthals GL. Nonredundant mass spectrometry: a strategy to integrate mass spectrometry acquisition and analysis. Proteomics. 4: 917-27. PMID 15048974 DOI: 10.1002/pmic.200300673 |
0.44 |
|
| 2003 |
Deshusses JM, Burgess JA, Scherl A, Wenger Y, Walter N, Converset V, Paesano S, Corthals GL, Hochstrasser DF, Sanchez JC. Exploitation of specific properties of trifluoroethanol for extraction and separation of membrane proteins. Proteomics. 3: 1418-24. PMID 12923766 DOI: 10.1002/pmic.200300492 |
0.41 |
|
| 2002 |
Scherl A, Couté Y, Déon C, Callé A, Kindbeiter K, Sanchez JC, Greco A, Hochstrasser D, Diaz JJ. Functional proteomic analysis of human nucleolus. Molecular Biology of the Cell. 13: 4100-9. PMID 12429849 DOI: 10.1091/mbc.E02-05-0271 |
0.314 |
|
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