Eva Maria Novoa - Publications

Affiliations: 
Massachusetts Institute of Technology, Cambridge, MA, United States 

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Jungfleisch J, Böttcher R, Talló-Parra M, Pérez-Vilaró G, Merits A, Novoa EM, Díez J. CHIKV infection reprograms codon optimality to favor viral RNA translation by altering the tRNA epitranscriptome. Nature Communications. 13: 4725. PMID 35953468 DOI: 10.1038/s41467-022-31835-x  0.314
2021 Cao J, Novoa EM, Zhang Z, Chen WCW, Liu D, Choi GCG, Wong ASL, Wehrspaun C, Kellis M, Lu TK. High-throughput 5' UTR engineering for enhanced protein production in non-viral gene therapies. Nature Communications. 12: 4138. PMID 34230498 DOI: 10.1038/s41467-021-24436-7  0.583
2020 Smith MA, Ersavas T, Ferguson JM, Liu H, Lucas MC, Begik O, Bojarski L, Barton K, Novoa EM. Molecular barcoding of native RNAs using nanopore sequencing and deep learning. Genome Research. PMID 32907883 DOI: 10.1101/Gr.260836.120  0.361
2020 Begik O, Lucas MC, Liu H, Ramirez JM, Mattick JS, Novoa EM. Integrative analyses of the RNA modification machinery reveal tissue- and cancer-specific signatures. Genome Biology. 21: 97. PMID 32375858 DOI: 10.1186/S13059-020-02009-Z  0.352
2019 Liu H, Begik O, Lucas MC, Ramirez JM, Mason CE, Wiener D, Schwartz S, Mattick JS, Smith MA, Novoa EM. Accurate detection of mA RNA modifications in native RNA sequences. Nature Communications. 10: 4079. PMID 31501426 DOI: 10.1038/S41467-019-11713-9  0.354
2019 Novoa EM, Jungreis I, Jaillon O, Kellis M. Elucidation of Codon Usage Signatures across the Domains of Life. Molecular Biology and Evolution. PMID 31220870 DOI: 10.1093/Molbev/Msz124  0.536
2018 Beaudoin JD, Novoa EM, Vejnar CE, Yartseva V, Takacs CM, Kellis M, Giraldez AJ. Analyses of mRNA structure dynamics identify embryonic gene regulatory programs. Nature Structural & Molecular Biology. 25: 677-686. PMID 30061596 DOI: 10.1038/S41594-018-0091-Z  0.543
2017 Jonkhout N, Tran J, Smith MA, Schonrock N, Mattick JS, Novoa EM. The RNA modification landscape in human disease. Rna (New York, N.Y.). PMID 28855326 DOI: 10.1261/Rna.063503.117  0.351
2017 Novoa EM, Mason CE, Mattick JS. Charting the unknown epitranscriptome. Nature Reviews. Molecular Cell Biology. PMID 28488699 DOI: 10.1038/Nrm.2017.49  0.365
2016 Saint-Léger A, Bello C, Dans PD, Torres AG, Novoa EM, Camacho N, Orozco M, Kondrashov FA, Ribas de Pouplana L. Saturation of recognition elements blocks evolution of new tRNA identities. Science Advances. 2: e1501860. PMID 27386510 DOI: 10.1126/Sciadv.1501860  0.39
2016 Barsacchi M, Novoa EM, Kellis M, Bechini A. SwiSpot: Modeling Riboswitches by Spotting Out Switching Sequences. Bioinformatics (Oxford, England). PMID 27378291 DOI: 10.1093/Bioinformatics/Btw401  0.535
2015 Liu Z, Vargas-Rodriguez O, Goto Y, Novoa EM, Ribas de Pouplana L, Suga H, Musier-Forsyth K. Homologous trans-editing factors with broad tRNA specificity prevent mistranslation caused by serine/threonine misactivation. Proceedings of the National Academy of Sciences of the United States of America. 112: 6027-32. PMID 25918376 DOI: 10.1073/Pnas.1423664112  0.359
2015 Novoa EM, Vargas-Rodriguez O, Lange S, Goto Y, Suga H, Musier-Forsyth K, Ribas de Pouplana L. Ancestral AlaX editing enzymes for control of genetic code fidelity are not tRNA-specific. The Journal of Biological Chemistry. 290: 10495-503. PMID 25724653 DOI: 10.1074/Jbc.M115.640060  0.324
2015 Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, ... ... Novoa EM, et al. Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes. Science (New York, N.Y.). 347: 1258522. PMID 25554792 DOI: 10.1126/Science.1258522  0.604
2012 Novoa EM, Ribas de Pouplana L. Speeding with control: codon usage, tRNAs, and ribosomes. Trends in Genetics : Tig. 28: 574-81. PMID 22921354 DOI: 10.1016/J.Tig.2012.07.006  0.438
2012 Novoa EM, Pavon-Eternod M, Pan T, Ribas de Pouplana L. A role for tRNA modifications in genome structure and codon usage. Cell. 149: 202-13. PMID 22464330 DOI: 10.1016/J.Cell.2012.01.050  0.456
2010 Novoa EM, Ribas de Pouplana L, Barril X, Orozco M. Ensemble Docking from Homology Models. Journal of Chemical Theory and Computation. 6: 2547-57. PMID 26613506 DOI: 10.1021/Ct100246Y  0.34
2010 Novoa EM, Castro de Moura M, Orozco M, Ribas de Pouplana L. A genomics method to identify pathogenicity-related proteins. Application to aminoacyl-tRNA synthetase-like proteins. Febs Letters. 584: 460-6. PMID 19913539 DOI: 10.1016/J.Febslet.2009.11.016  0.428
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