Meredith E. Protas, Ph.D. - Publications

Affiliations: 
Harvard University, Cambridge, MA, United States 
Area:
genetics, morphogenesis, limb, evolution

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Fišer Ž, Whitehorn H, Furness T, Trontelj P, Protas M. Genetic bias in repeated evolution of pigment loss in cave populations of the Asellus aquaticus species complex. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. PMID 38828691 DOI: 10.1002/jez.b.23256  0.379
2020 Mammola S, Amorim IR, Bichuette ME, Borges PAV, Cheeptham N, Cooper SJB, Culver DC, Deharveng L, Eme D, Ferreira RL, Fišer C, Fišer Ž, Fong DW, Griebler C, Jeffery WR, ... ... Protas M, et al. Fundamental research questions in subterranean biology. Biological Reviews of the Cambridge Philosophical Society. PMID 32841483 DOI: 10.1111/Brv.12642  0.592
2019 Gross JB, Sun DA, Carlson BM, Brodo-Abo S, Protas ME. Developmental Transcriptomic Analysis of the Cave-Dwelling Crustacean, . Genes. 11. PMID 31905778 DOI: 10.3390/Genes11010042  0.449
2018 Mojaddidi H, Fernandez FE, Erickson PA, Protas ME. Embryonic origin and genetic basis of cave associated phenotypes in the isopod crustacean Asellus aquaticus. Scientific Reports. 8: 16589. PMID 30409988 DOI: 10.1038/S41598-018-34405-8  0.429
2018 Re C, Fišer Ž, Perez J, Tacdol A, Trontelj P, Protas ME. Common genetic basis of eye and pigment loss in two distinct cave populations of the isopod crustacean Asellus aquaticus. Integrative and Comparative Biology. PMID 29790967 DOI: 10.1093/Icb/Icy028  0.467
2017 Protas ME, Weh E, Footz T, Kasberger J, Baraban SC, Levin AV, Katz LJ, Ritch R, Walter MA, Semina EV, Gould DB. Mutations of conserved non-coding elements of PITX2 in patients with ocular dysgenesis and developmental glaucoma. Human Molecular Genetics. 26: 3630-3638. PMID 28911203 DOI: 10.1093/Hmg/Ddx251  0.331
2016 Battelle BA, Ryan JF, Kempler KE, Saraf SR, Marten CE, Warren WC, Minx P, Montague MJ, Green PJ, Schmidt SA, Fulton L, Patel NH, Protas ME, Wilson RK, Porter ML. Opsin repertoire and expression patterns in horseshoe crabs: evidence from the genome of Limulus polyphemus (Arthropoda: Chelicerata). Genome Biology and Evolution. PMID 27189985 DOI: 10.1093/Gbe/Evw100  0.4
2015 Stahl BA, Gross JB, Speiser DI, Oakley TH, Patel NH, Gould DB, Protas ME. A Transcriptomic Analysis of Cave, Surface, and Hybrid Isopod Crustaceans of the Species Asellus aquaticus. Plos One. 10: e0140484. PMID 26462237 DOI: 10.1371/Journal.Pone.0140484  0.429
2014 Speiser DI, Pankey MS, Zaharoff AK, Battelle BA, Bracken-Grissom HD, Breinholt JW, Bybee SM, Cronin TW, Garm A, Lindgren AR, Patel NH, Porter ML, Protas ME, Rivera AS, Serb JM, et al. Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms. Bmc Bioinformatics. 15: 350. PMID 25407802 DOI: 10.1186/S12859-014-0350-X  0.339
2012 Protas M, Jeffery WR. Evolution and development in cave animals: from fish to crustaceans. Wiley Interdisciplinary Reviews. Developmental Biology. 1: 823-45. PMID 23580903 DOI: 10.1002/Wdev.61  0.4
2012 Kronforst MR, Barsh GS, Kopp A, Mallet J, Monteiro A, Mullen SP, Protas M, Rosenblum EB, Schneider CJ, Hoekstra HE. Unraveling the thread of nature's tapestry: the genetics of diversity and convergence in animal pigmentation. Pigment Cell & Melanoma Research. 25: 411-33. PMID 22578174 DOI: 10.1111/J.1755-148X.2012.01014.X  0.467
2011 Protas ME, Trontelj P, Patel NH. Genetic basis of eye and pigment loss in the cave crustacean, Asellus aquaticus. Proceedings of the National Academy of Sciences of the United States of America. 108: 5702-7. PMID 21422298 DOI: 10.1073/Pnas.1013850108  0.49
2009 Liubicich DM, Serano JM, Pavlopoulos A, Kontarakis Z, Protas ME, Kwan E, Chatterjee S, Tran KD, Averof M, Patel NH. Knockdown of Parhyale Ultrabithorax recapitulates evolutionary changes in crustacean appendage morphology. Proceedings of the National Academy of Sciences of the United States of America. 106: 13892-6. PMID 19666517 DOI: 10.1073/Pnas.0903105106  0.405
2009 Protas M, Patel NH. The genetic basis of morphological change in the cave isopod, Asellus aquaticus Developmental Biology. 331: 462. DOI: 10.1016/J.Ydbio.2009.05.285  0.372
2008 Gross JB, Protas M, Conrad M, Scheid PE, Vidal O, Jeffery WR, Borowsky R, Tabin CJ. Synteny and candidate gene prediction using an anchored linkage map of Astyanax mexicanus. Proceedings of the National Academy of Sciences of the United States of America. 105: 20106-11. PMID 19104060 DOI: 10.1073/Pnas.0806238105  0.567
2008 Protas ME, Patel NH. Evolution of coloration patterns. Annual Review of Cell and Developmental Biology. 24: 425-46. PMID 18593352 DOI: 10.1146/Annurev.Cellbio.24.110707.175302  0.429
2008 Protas M, Tabansky I, Conrad M, Gross JB, Vidal O, Tabin CJ, Borowsky R. Multi-trait evolution in a cave fish, Astyanax mexicanus. Evolution & Development. 10: 196-209. PMID 18315813 DOI: 10.1111/J.1525-142X.2008.00227.X  0.589
2007 Protas M, Conrad M, Gross JB, Tabin C, Borowsky R. Regressive evolution in the Mexican cave tetra, Astyanax mexicanus. Current Biology : Cb. 17: 452-4. PMID 17306543 DOI: 10.1016/J.Cub.2007.01.051  0.552
2006 Protas ME, Hersey C, Kochanek D, Zhou Y, Wilkens H, Jeffery WR, Zon LI, Borowsky R, Tabin CJ. Genetic analysis of cavefish reveals molecular convergence in the evolution of albinism. Nature Genetics. 38: 107-11. PMID 16341223 DOI: 10.1038/Ng1700  0.604
2004 Abzhanov A, Protas M, Grant BR, Grant PR, Tabin CJ. Bmp4 and morphological variation of beaks in Darwin's finches. Science (New York, N.Y.). 305: 1462-5. PMID 15353802 DOI: 10.1126/Science.1098095  0.603
2004 Protas ME, Tabin CJ. Reduce your pelvis in 10000 years or less. Developmental Cell. 6: 613-4. PMID 15130486 DOI: 10.1016/S1534-5807(04)00140-6  0.517
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