Katherine A. Dunn, Ph.D. - Publications

Affiliations: 
Texas A & M University, College Station, TX, United States 
Area:
Evolutionary Genetics, Phylogenetics, Mammalogy

19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Baker JL, Dunn K, Mingrone J, Wood BA, Karpinski BA, Sherwood CC, Wildman DE, Maynard TM, Bielawski JP. Functional Divergence of the Nuclear Receptor NR2C1 as a Modulator of Pluripotentiality During Hominid Evolution. Genetics. PMID 27075724 DOI: 10.1534/genetics.115.183889  0.64
2016 Moore-Connors JM, Dunn KA, Bielawski JP, Van Limbergen J. Novel Strategies for Applied Metagenomics. Inflammatory Bowel Diseases. PMID 26848519 DOI: 10.1097/MIB.0000000000000717  0.64
2015 Xu X, Dunn KA, Field C. A Robust ANOVA Approach to Estimating a Phylogeny from Multiple Genes. Molecular Biology and Evolution. 32: 2186-94. PMID 25841490 DOI: 10.1093/molbev/msv084  0.64
2015 Shafiei M, Dunn KA, Boon E, MacDonald SM, Walsh DA, Gu H, Bielawski JP. BioMiCo: a supervised Bayesian model for inference of microbial community structure. Microbiome. 3: 8. PMID 25774293 DOI: 10.1186/s40168-015-0073-x  0.64
2014 Shafiei M, Dunn KA, Chipman H, Gu H, Bielawski JP. BiomeNet: a Bayesian model for inference of metabolic divergence among microbial communities. Plos Computational Biology. 10: e1003918. PMID 25412107 DOI: 10.1371/journal.pcbi.1003918  0.64
2014 El-Swais H, Dunn KA, Bielawski JP, Li WK, Walsh DA. Seasonal assemblages and short-lived blooms in coastal north-west Atlantic Ocean bacterioplankton. Environmental Microbiology. PMID 25244530 DOI: 10.1111/1462-2920.12629  0.64
2013 Dunn KA, Jiang W, Field C, Bielawski JP. Improving evolutionary models for mitochondrial protein data with site-class specific amino acid exchangeability matrices. Plos One. 8: e55816. PMID 23383286 DOI: 10.1371/journal.pone.0055816  0.64
2010 Rowe DL, Dunn KA, Adkins RM, Honeycutt RL. Molecular clocks keep dispersal hypotheses afloat: Evidence for trans-Atlantic rafting by rodents Journal of Biogeography. 37: 305-324. DOI: 10.1111/j.1365-2699.2009.02190.x  0.64
2009 Dunn KA, Bielawski JP, Ward TJ, Urquhart C, Gu H. Reconciling ecological and genomic divergence among lineages of listeria under an "extended mosaic genome concept". Molecular Biology and Evolution. 26: 2605-15. PMID 19666992 DOI: 10.1093/molbev/msp176  0.64
2008 Ward TJ, Ducey TF, Usgaard T, Dunn KA, Bielawski JP. Multilocus genotyping assays for single nucleotide polymorphism-based subtyping of Listeria monocytogenes isolates. Applied and Environmental Microbiology. 74: 7629-42. PMID 18931295 DOI: 10.1128/AEM.01127-08  0.64
2008 Bao L, Gu H, Dunn KA, Bielawski JP. Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution. Molecular Biology and Evolution. 25: 1995-2007. PMID 18586695 DOI: 10.1093/molbev/msn145  0.64
2007 Anisimova M, Bielawski J, Dunn K, Yang Z. Phylogenomic analysis of natural selection pressure in Streptococcus genomes. Bmc Evolutionary Biology. 7: 154. PMID 17760998 DOI: 10.1186/1471-2148-7-154  0.64
2007 Hurley IA, Mueller RL, Dunn KA, Schmidt EJ, Friedman M, Ho RK, Prince VE, Yang Z, Thomas MG, Coates MI. A new time-scale for ray-finned fish evolution. Proceedings. Biological Sciences / the Royal Society. 274: 489-98. PMID 17476768 DOI: 10.1098/rspb.2006.3749  0.64
2007 Bao L, Gu H, Dunn KA, Bielawski JP. Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data. Bmc Evolutionary Biology. 7: S5. PMID 17288578 DOI: 10.1186/1471-2148-7-S1-S5  0.64
2004 Bielawski JP, Dunn KA, Sabehi G, Béjà O. Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment. Proceedings of the National Academy of Sciences of the United States of America. 101: 14824-9. PMID 15466697 DOI: 10.1073/pnas.0403999101  0.64
2003 Dunn KA, McEachran JD, Honeycutt RL. Molecular phylogenetics of myliobatiform fishes (Chondrichthyes: Myliobatiformes), with comments on the effects of missing data on parsimony and likelihood. Molecular Phylogenetics and Evolution. 27: 259-70. PMID 12695090 DOI: 10.1016/S1055-7903(02)00442-6  0.64
2001 Dunn KA, Bielawski JP, Yang Z. Substitution rates in Drosophila nuclear genes: implications for translational selection. Genetics. 157: 295-305. PMID 11139510  0.64
2000 Bielawski JP, Dunn KA, Yang Z. Rates of nucleotide substitution and mammalian nuclear gene evolution. Approximate and maximum-likelihood methods lead to different conclusions. Genetics. 156: 1299-308. PMID 11063703  0.64
1998 McEachran JD, Dunn KA. Phylogenetic analysis of skates, a morphologically conservative Clade of Elasmobranchs (Chondrichthyes: Rajidae) Copeia. 271-290.  0.64
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