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Katherine A. Dunn, Ph.D. - Publications

Affiliations: 
Texas A & M University, College Station, TX, United States 
Area:
Evolutionary Genetics, Phylogenetics, Mammalogy
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25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Jones CMA, Connors J, Dunn KA, Bielawski JP, Comeau AM, Langille MGI, Van Limbergen J. Bacterial Taxa and Functions Are Predictive of Sustained Remission Following Exclusive Enteral Nutrition in Pediatric Crohn's Disease. Inflammatory Bowel Diseases. PMID 31961432 DOI: 10.1093/Ibd/Izaa001  0.317
2020 Van Limbergen J, Dunn K, Wine E, Sigall Boneh R, Bielawski J, Levine A. OP22 Crohn’s disease exclusion diet reduces bacterial dysbiosis towards healthy controls in paediatric Crohn’s disease Journal of Crohn's and Colitis. 14: S019-S020. DOI: 10.1093/Ecco-Jcc/Jjz203.021  0.341
2019 Connors J, Dunn KA, Allott J, Bandsma R, Rashid M, Otley AR, Bielawski JP, Van Limbergen J. The relationship between fecal bile acids and microbiome community structure in pediatric Crohn's disease. The Isme Journal. PMID 31796936 DOI: 10.1038/S41396-019-0560-3  0.328
2019 Levine A, Wine E, Assa A, Sigall Boneh R, Shaoul R, Kori M, Cohen S, Peleg S, Shamali H, On A, Millman P, Abramas L, Ziv-Baran T, Grant S, Abitbol G, ... Dunn KA, et al. Crohn's Disease Exclusion Diet Plus Partial Enteral Nutrition Induces Sustained Remission in a Randomized Controlled Trial. Gastroenterology. PMID 31170412 DOI: 10.1053/J.Gastro.2019.04.021  0.304
2019 Dunn KA, Bielawski JP, Boneh RS, Shamir R, Wine E, van Limbergen JE, Levine A. 267 – Exclusive Enteral Nutrition (EEN) and Crohn's Disease Exclusion Diet (CDED) Produce Broadly Similar Taxonomic and Functional Changes During the Induction of Remission, with Een Showing a Pattern of Rebound After Return to Free Diet+Partial Enteral Nutrition (PEN) Gastroenterology. 156: S-51. DOI: 10.1016/S0016-5085(19)36911-2  0.306
2018 Dunn KA, Andrews K, Bashwih RO, Bielawski JP. Bayesian Inference of Microbial Community Structure from Metagenomic Data Using BioMiCo. Methods in Molecular Biology (Clifton, N.J.). 1849: 267-289. PMID 30298260 DOI: 10.1007/978-1-4939-8728-3_17  0.305
2018 Douglas GM, Hansen R, Jones CMA, Dunn KA, Comeau AM, Bielawski JP, Tayler R, El-Omar EM, Russell RK, Hold GL, Langille MGI, Van Limbergen J. Multi-omics differentially classify disease state and treatment outcome in pediatric Crohn's disease. Microbiome. 6: 13. PMID 29335008 DOI: 10.1186/S40168-018-0398-3  0.307
2017 Dunn KA, Sigall-Boneh R, Bielawski JP, Turner D, Van Limbergen J, Levine A. DOP007 Crohn's disease exclusion diet and partial enteral nutrition (CDED+PEN) vs exclusive enteral nutrition (EEN). Microbiome changes of a randomized clinical trial (RCT) in pediatric CD: remission is associated with similar structural + functional profiles. Journal of Crohn's & Colitis. 11: S29. PMID 28174932 DOI: 10.1093/Ecco-Jcc/Jjx002.044  0.324
2017 MacLellan AL, Connors J, Macintyre B, Douglas G, Dunn KA, Bielawski JP, Noble A, Mahdi G, Rashid M, Otley A, Cahill LE, Langille M, Van Limbergen JE. Fibre Intake is Associated with Microbiome Changes in Pediatric Crohn's Disease Patients Following Induction of Remission with Exclusive Enteral Nutrition (EEN) Gastroenterology. 152: S958. DOI: 10.1016/S0016-5085(17)33253-5  0.304
2017 Dunn KA, Boneh RS, Bielawski JP, Turner D, Van Limbergen JE, Levine A. Crohn’s Disease Exclusion Diet and Partial Enteral Nutrition (CDED+PEN) vs Exclusive Enteral Nutrition (EEN) - Microbiome Changes of a Randomized Clinical Trial (RCT) in Pediatric CD: Remission is Associated with Similar Structural and Functional Profiles Gastroenterology. 152: S213. DOI: 10.1016/S0016-5085(17)31015-6  0.304
2016 Dunn KA, Moore-Connors J, MacIntyre B, Stadnyk AW, Thomas NA, Noble A, Mahdi G, Rashid M, Otley AR, Bielawski JP, Van Limbergen J. Early Changes in Microbial Community Structure Are Associated with Sustained Remission After Nutritional Treatment of Pediatric Crohn's Disease. Inflammatory Bowel Diseases. PMID 27805918 DOI: 10.1097/Mib.0000000000000956  0.339
2016 Dunn KA, Moore-Connors J, MacIntyre B, Stadnyk A, Thomas NA, Noble A, Mahdi G, Rashid M, Otley AR, Bielawski JP, Van Limbergen J. The Gut Microbiome of Pediatric Crohn's Disease Patients Differs from Healthy Controls in Genes That Can Influence the Balance Between a Healthy and Dysregulated Immune Response. Inflammatory Bowel Diseases. 22: 2607-2618. PMID 27760077 DOI: 10.1097/Mib.0000000000000949  0.349
2016 Moore-Connors JM, Dunn KA, Bielawski JP, Van Limbergen J. Novel Strategies for Applied Metagenomics. Inflammatory Bowel Diseases. PMID 26848519 DOI: 10.1097/Mib.0000000000000717  0.316
2015 Xu X, Dunn KA, Field C. A Robust ANOVA Approach to Estimating a Phylogeny from Multiple Genes. Molecular Biology and Evolution. 32: 2186-94. PMID 25841490 DOI: 10.1093/Molbev/Msv084  0.314
2014 Shafiei M, Dunn KA, Chipman H, Gu H, Bielawski JP. BiomeNet: a Bayesian model for inference of metabolic divergence among microbial communities. Plos Computational Biology. 10: e1003918. PMID 25412107 DOI: 10.1371/Journal.Pcbi.1003918  0.315
2014 El-Swais H, Dunn KA, Bielawski JP, Li WK, Walsh DA. Seasonal assemblages and short-lived blooms in coastal north-west Atlantic Ocean bacterioplankton. Environmental Microbiology. PMID 25244530 DOI: 10.1111/1462-2920.12629  0.301
2010 Rowe DL, Dunn KA, Adkins RM, Honeycutt RL. Molecular clocks keep dispersal hypotheses afloat: Evidence for trans-Atlantic rafting by rodents Journal of Biogeography. 37: 305-324. DOI: 10.1111/J.1365-2699.2009.02190.X  0.591
2009 Dunn KA, Bielawski JP, Ward TJ, Urquhart C, Gu H. Reconciling ecological and genomic divergence among lineages of listeria under an "extended mosaic genome concept". Molecular Biology and Evolution. 26: 2605-15. PMID 19666992 DOI: 10.1093/Molbev/Msp176  0.323
2008 Bao L, Gu H, Dunn KA, Bielawski JP. Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution. Molecular Biology and Evolution. 25: 1995-2007. PMID 18586695 DOI: 10.1093/Molbev/Msn145  0.308
2007 Anisimova M, Bielawski J, Dunn K, Yang Z. Phylogenomic analysis of natural selection pressure in Streptococcus genomes. Bmc Evolutionary Biology. 7: 154. PMID 17760998 DOI: 10.1186/1471-2148-7-154  0.302
2007 Hurley IA, Mueller RL, Dunn KA, Schmidt EJ, Friedman M, Ho RK, Prince VE, Yang Z, Thomas MG, Coates MI. A new time-scale for ray-finned fish evolution. Proceedings. Biological Sciences / the Royal Society. 274: 489-98. PMID 17476768 DOI: 10.1098/Rspb.2006.3749  0.326
2007 Bao L, Gu H, Dunn KA, Bielawski JP. Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data. Bmc Evolutionary Biology. 7: S5. PMID 17288578 DOI: 10.1186/1471-2148-7-S1-S5  0.31
2003 Dunn KA, McEachran JD, Honeycutt RL. Molecular phylogenetics of myliobatiform fishes (Chondrichthyes: Myliobatiformes), with comments on the effects of missing data on parsimony and likelihood. Molecular Phylogenetics and Evolution. 27: 259-70. PMID 12695090 DOI: 10.1016/S1055-7903(02)00442-6  0.524
1998 McEachran JD, Dunn KA. Phylogenetic analysis of skates, a morphologically conservative Clade of Elasmobranchs (Chondrichthyes: Rajidae) Copeia. 271-290. DOI: 10.2307/1447424  0.318
1995 Dunn KA, Morrissey JF. Molecular Phylogeny of Elasmobranchs Copeia. 1995: 526. DOI: 10.2307/1446750  0.307
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