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Syed A. Hashsham - Publications

Affiliations: 
Crop and Soil Sciences- Environmental Toxicology - Doctor of Philosophy Michigan State University, East Lansing, MI 
Area:
Microbiology Biology, Ecology Biology, Toxicology
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78 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Fu Y, Dou Q, Smalla K, Wang Y, Johnson TA, Brandt KK, Mei Z, Liao M, Hashsham SA, Schäffer A, Smidt H, Zhang T, Li H, Stedtfeld R, Sheng H, et al. Gut microbiota research nexus: One Health relationship between human, animal, and environmental resistomes. Mlife. 2: 350-364. PMID 38818274 DOI: 10.1002/mlf2.12101  0.611
2021 Williams MR, Stedtfeld RD, Stedtfeld TM, Crawford RB, Kuwahara T, Kaminski NE, Tiedje JM, Hashsham SA. MicroRNA-based host response to toxicant exposure is influenced by the presence of gut microbial populations. The Science of the Total Environment. 797: 149130. PMID 34311349 DOI: 10.1016/j.scitotenv.2021.149130  0.576
2020 Xu M, Wang F, Sheng H, Stedtfeld RD, Li Z, Hashsham SA, Jiang X, Tiedje JM. Does anaerobic condition play a more positive role in dissipation of antibiotic resistance genes in soil? The Science of the Total Environment. 143737. PMID 33243511 DOI: 10.1016/j.scitotenv.2020.143737  0.599
2020 Fu Y, Wang F, Sheng H, Xu M, Liang Y, Bian Y, Hashsham SA, Jiang X, Tiedje JM. Enhanced antibacterial activity of magnetic biochar conjugated quaternary phosphonium salt Carbon. 163: 360-369. DOI: 10.1016/J.Carbon.2020.03.010  0.309
2019 Xu M, Stedtfeld RD, Wang F, Hashsham SA, Song Y, Chuang Y, Fan J, Li H, Jiang X, Tiedje JM. Composting increased persistence of manure-borne antibiotic resistance genes in soils with different fertilization history. The Science of the Total Environment. 689: 1172-1180. PMID 31466157 DOI: 10.1016/J.Scitotenv.2019.06.376  0.619
2019 Jha PN, Gomaa AB, Yanni YG, El-Saadany AY, Stedtfeld TM, Stedtfeld RD, Gantner S, Chai B, Cole J, Hashsham SA, Dazzo FB. Alterations in the Endophyte-Enriched Root-Associated Microbiome of Rice Receiving Growth-Promoting Treatments of Urea Fertilizer and Rhizobium Biofertilizer. Microbial Ecology. PMID 31346687 DOI: 10.1007/S00248-019-01406-7  0.634
2019 Williams MR, Hashsham SA. Direct or DNA Extraction-Free Amplification and Quantification of Foodborne Pathogens. Methods in Molecular Biology (Clifton, N.J.). 1918: 21-33. PMID 30580396 DOI: 10.1007/978-1-4939-9000-9_2  0.429
2018 Dang H, Kanitkar YH, Stedtfeld RD, Hatzinger PB, Hashsham SA, Cupples AM. Abundance of Chlorinated Solvent and 1,4-Dioxane Degrading Microorganisms at Five Chlorinated Solvent Contaminated Sites Determined via Shotgun Sequencing. Environmental Science & Technology. PMID 30427665 DOI: 10.1021/Acs.Est.8B04895  0.67
2018 Wang F, Xu M, Stedtfeld RD, Sheng H, Fan J, Liu M, Chai B, de Carvalho TS, Li H, Li Z, Hashsham SA, Tiedje JM. Long-term Effect of Different Fertilization and Cropping Systems on the Soil Antibiotic Resistome. Environmental Science & Technology. PMID 30375866 DOI: 10.1021/Acs.Est.8B04330  0.614
2018 Stedtfeld RD, Guo X, Stedtfeld TM, Sheng H, Williams MR, Hauschild K, Gunturu S, Tift L, Wang F, Howe A, Chai B, Yin D, Cole JR, Tiedje JM, Hashsham SA. Primer set 2.0 for highly parallel qPCR array targeting antibiotic resistance genes and mobile genetic elements. Fems Microbiology Ecology. 94. PMID 30052926 DOI: 10.1093/Femsec/Fiy130  0.685
2017 Williams MR, Stedtfeld RD, Waseem H, Stedtfeld T, Upham B, Khalife W, Etchebarne B, Hughes M, Tiedje JM, Hashsham SA. Implications of direct amplification for measuring antimicrobial resistance using point-of-care devices. Analytical Methods : Advancing Methods and Applications. 9: 1229-1241. PMID 29657581 DOI: 10.1039/C6Ay03405E  0.687
2017 Etchebarne BE, Li Z, Stedtfeld RD, Nicholas MC, Williams MR, Johnson TA, Stedtfeld TM, Kostic T, Khalife WT, Tiedje JM, Hashsham SA, Hughes MJ. Evaluation of Nucleic Acid Isothermal Amplification Methods for Human Clinical Microbial Infection Detection. Frontiers in Microbiology. 8: 2211. PMID 29312154 DOI: 10.3389/Fmicb.2017.02211  0.686
2017 Williams MR, Stedtfeld RD, Engle C, Salach P, Fakher U, Stedtfeld T, Dreelin E, Stevenson RJ, Latimore J, Hashsham SA. Isothermal amplification of environmental DNA (eDNA) for direct field-based monitoring and laboratory confirmation of Dreissena sp. Plos One. 12: e0186462. PMID 29036210 DOI: 10.1371/Journal.Pone.0186462  0.7
2017 Kanitkar YH, Stedtfeld RD, Hatzinger PB, Hashsham SA, Cupples AM. Most probable number with visual based LAMP for the quantification of reductive dehalogenase genes in groundwater samples. Journal of Microbiological Methods. 143: 44-49. PMID 29031631 DOI: 10.1016/J.Mimet.2017.10.003  0.72
2017 Williams MR, Stedtfeld RD, Tiedje JM, Hashsham SA. MicroRNAs-Based Inter-Domain Communication between the Host and Members of the Gut Microbiome. Frontiers in Microbiology. 8: 1896. PMID 29021788 DOI: 10.3389/Fmicb.2017.01896  0.625
2017 Waseem H, Williams MR, Stedtfeld RD, Hashsham SA. Antimicrobial Resistance in the Environment. Water Environment Research : a Research Publication of the Water Environment Federation. 89: 921-941. PMID 28954648 DOI: 10.2175/106143017X15023776270179  0.642
2017 Stedtfeld RD, Chai B, Crawford RB, Stedtfeld TM, Williams MR, Xiangwen S, Kuwahara T, Cole JR, Kaminski NE, Tiedje JM, Hashsham SA. Modulatory Influence of Segmented Filamentous Bacteria on Transcriptomic Response of Gnotobiotic Mice Exposed to TCDD. Frontiers in Microbiology. 8: 1708. PMID 28936204 DOI: 10.3389/Fmicb.2017.01708  0.63
2017 Stedtfeld RD, Brett Sallach J, Crawford RB, Stedtfeld TM, Williams MR, Waseem H, Johnston CT, Li H, Teppen BJ, Kaminski NE, Boyd SA, Tiedje JM, Hashsham SA. TCDD administered on activated carbon eliminates bioavailability and subsequent shifts to a key murine gut commensal. Applied Microbiology and Biotechnology. PMID 28812142 DOI: 10.1007/S00253-017-8460-9  0.633
2017 Trebitz AS, Hoffman JC, Darling JA, Pilgrim EM, Kelly JR, Brown EA, Chadderton WL, Egan SP, Grey EK, Hashsham SA, Klymus KE, Mahon AR, Ram JL, Schultz MT, Stepien CA, et al. Early detection monitoring for aquatic non-indigenous species: Optimizing surveillance, incorporating advanced technologies, and identifying research needs. Journal of Environmental Management. 202: 299-310. PMID 28738203 DOI: 10.1016/J.Jenvman.2017.07.045  0.371
2017 Munir A, Waseem H, Williams MR, Stedtfeld RD, Gulari E, Tiedje JM, Hashsham SA. Modeling Hybridization Kinetics of Gene Probes in a DNA Biochip Using FEMLAB. Microarrays (Basel, Switzerland). 6. PMID 28555058 DOI: 10.3390/Microarrays6020009  0.678
2017 Williams MR, Stedtfeld RD, Stedtfeld TM, Tiedje JM, Hashsham SA. Quantification of microRNAs directly from body fluids using a base-stacking isothermal amplification method in a point-of-care device. Biomedical Microdevices. 19: 45. PMID 28536858 DOI: 10.1007/S10544-017-0191-2  0.671
2017 Samhan FA, Stedtfeld TM, Waseem H, Williams MR, Stedtfeld RD, Hashsham SA. On-filter direct amplification of Legionella pneumophila for rapid assessment of its abundance and viability. Water Research. 121: 162-170. PMID 28527390 DOI: 10.1016/J.Watres.2017.05.028  0.699
2017 Stedtfeld RD, Stedtfeld TM, Fader KA, Williams MR, Bhaduri P, Quensen J, Zacharewski TR, Tiedje JM, Hashsham SA. TCDD influences reservoir of antibiotic resistance genes in murine gut microbiome. Fems Microbiology Ecology. PMID 28475713 DOI: 10.1093/Femsec/Fix058  0.669
2017 Stedtfeld RD, Stedtfeld TM, Waseem H, Fitschen-Brown M, Guo X, Chai B, Williams MR, Shook T, Logan A, Graham A, Chae JC, Sul WJ, VanHouten J, Cole JR, Zylstra GJ, ... ... Hashsham SA, et al. Isothermal assay targeting class 1 integrase gene for environmental surveillance of antibiotic resistance markers. Journal of Environmental Management. 198: 213-220. PMID 28460328 DOI: 10.1016/J.Jenvman.2017.04.079  0.718
2017 Srinivasan V, Stedtfeld RD, Tourlousse DM, Baushke SW, Xin Y, Miller SM, Pham T, Rouillard JM, Gulari E, Tiedje JM, Hashsham SA. Diagnostic microarray for 14 water and foodborne pathogens using a flatbed scanner. Journal of Microbiological Methods. PMID 28438642 DOI: 10.1016/J.Mimet.2017.04.009  0.815
2017 Waseem H, Williams MR, Stedtfeld T, Chai B, Stedtfeld RD, Cole JR, Tiedje JM, Hashsham SA. Virulence factor activity relationships (VFARs): a bioinformatics perspective. Environmental Science. Processes & Impacts. PMID 28261716 DOI: 10.1039/C6Em00689B  0.657
2017 Kanitkar YH, Stedtfeld RD, Hatzinger PB, Hashsham SA, Cupples AM. Development and application of a rapid, user-friendly, and inexpensive method to detect Dehalococcoides sp. reductive dehalogenase genes from groundwater. Applied Microbiology and Biotechnology. PMID 28238079 DOI: 10.1007/S00253-017-8203-Y  0.717
2016 Williams MR, Stedtfeld RD, Guo X, Hashsham SA. Antimicrobial Resistance in the Environment. Water Environment Research : a Research Publication of the Water Environment Federation. 88: 1951-1967. PMID 27931396  0.606
2016 Ahmad F, Stedtfeld RD, Waseem H, Williams MR, Cupples AM, Tiedje JM, Hashsham SA. Most probable number - loop mediated isothermal amplification (MPN-LAMP) for quantifying waterborne pathogens in <25min. Journal of Microbiological Methods. 132: 27-33. PMID 27856278 DOI: 10.1016/J.Mimet.2016.11.010  0.743
2016 Wang F, Stedtfeld RD, Kim OS, Chai B, Yang L, Stedtfeld TM, Hong SG, Kim D, Lim HS, Hashsham SA, Tiedje JM, Sul WJ. Influence of Soil Characteristics and Proximity to Antarctic Research Stations on Abundance of Antibiotic Resistance Genes in Soils. Environmental Science & Technology. PMID 27797533 DOI: 10.1021/Acs.Est.6B02863  0.671
2016 Stedtfeld RD, Stedtfeld TM, Samhan F, Kanitkar YH, Hatzinger PB, Cupples AM, Hashsham SA. Direct loop mediated isothermal amplification on filters for quantification of Dehalobacter in groundwater. Journal of Microbiological Methods. PMID 27720723 DOI: 10.1016/J.Mimet.2016.09.025  0.699
2016 Williams MR, Stedtfeld RD, Guo X, Hashsham SA. Antimicrobial Resistance in the Environment. Water Environment Research : a Research Publication of the Water Environment Federation. 88: 1951-67. PMID 27620115 DOI: 10.2175/106143016X14696400495974  0.606
2016 Chai B, Tsoi TV, Iwai S, Liu C, Fish JA, Gu C, Johnson TA, Zylstra G, Teppen BJ, Li H, Hashsham SA, Boyd SA, Cole JR, Tiedje JM. Sphingomonas wittichii Strain RW1 Genome-Wide Gene Expression Shifts in Response to Dioxins and Clay. Plos One. 11: e0157008. PMID 27309357 DOI: 10.1371/Journal.Pone.0157008  0.325
2016 Johnson TA, Stedtfeld RD, Wang Q, Cole JR, Hashsham SA, Looft T, Zhu YG, Tiedje JM. Clusters of Antibiotic Resistance Genes Enriched Together Stay Together in Swine Agriculture. Mbio. 7. PMID 27073098 DOI: 10.1128/Mbio.02214-15  0.638
2016 Stedtfeld RD, Williams M, Fakher U, Johnson TA, Stedtfeld TM, Wang F, Khalife WT, Hughes M, Etchebarne B, Tiedje JM, Hashsham SA. Antimicrobial Resistance (AR) Dashboard Application for Mapping Environmental Occurrence and Resistant Pathogens. Fems Microbiology Ecology. PMID 26850162 DOI: 10.1093/Femsec/Fiw020  0.671
2016 Kanitkar YH, Stedtfeld RD, Steffan RJ, Hashsham SA, Cupples AM. Development of Loop Mediated Isothermal Amplification (LAMP) for Rapid Detection and Quantification of Dehalococcoides spp. Biomarker Genes in Commercial Reductive Dechlorinating Cultures KB-1 and SDC-9. Applied and Environmental Microbiology. PMID 26746711 DOI: 10.1128/Aem.03660-15  0.713
2015 Seyrig G, Stedtfeld RD, Tourlousse DM, Ahmad F, Towery K, Cupples AM, Tiedje JM, Hashsham SA. Selection of fluorescent DNA dyes for real-time LAMP with portable and simple optics. Journal of Microbiological Methods. PMID 26554941 DOI: 10.1016/J.Mimet.2015.11.004  0.78
2015 Samhan FA, Kronlein MR, Fakher U, Kronlein C, Stedtfeld RD, Hashsham SA. Detection and Occurrence of Indicator Organisms and Pathogens. Water Environment Research : a Research Publication of the Water Environment Federation. 87: 883-900. PMID 26420074 DOI: 10.2175/106143015X14338845155147  0.67
2015 Stedtfeld RD, Liu YC, Stedtfeld TM, Kostic T, Kronlein M, Srivannavit O, Khalife WT, Tiedje JM, Gulari E, Hughes M, Etchebarne B, Hashsham SA. Static self-directed sample dispensing into a series of reaction wells on a microfluidic card for parallel genetic detection of microbial pathogens. Biomedical Microdevices. 17: 9994. PMID 26260693 DOI: 10.1007/S10544-015-9994-1  0.701
2015 Kostić T, Ellis M, Williams MR, Stedtfeld TM, Kaneene JB, Stedtfeld RD, Hashsham SA. Thirty-minute screening of antibiotic resistance genes in bacterial isolates with minimal sample preparation in static self-dispensing 64 and 384 assay cards. Applied Microbiology and Biotechnology. 99: 7711-22. PMID 26227406 DOI: 10.1007/S00253-015-6774-Z  0.7
2014 Stedtfeld RD, Stedtfeld TM, Kronlein M, Seyrig G, Steffan RJ, Cupples AM, Hashsham SA. DNA extraction-free quantification of Dehalococcoides spp. in groundwater using a hand-held device. Environmental Science & Technology. 48: 13855-63. PMID 25360694 DOI: 10.1021/Es503472H  0.8
2014 Hashsham S. Digital health, microfluidics, and bedside genetic testing. Molecular Cytogenetics. 7: I55. PMID 24940380 DOI: 10.1186/1755-8166-7-S1-I55  0.397
2013 Wong MV, Hashsham SA, Gulari E, Rouillard JM, Aw TG, Rose JB. Detection and characterization of human pathogenic viruses circulating in community wastewater using multi target microarrays and polymerase chain reaction. Journal of Water and Health. 11: 659-70. PMID 24334840 DOI: 10.2166/Wh.2013.322  0.382
2013 Zhu YG, Johnson TA, Su JQ, Qiao M, Guo GX, Stedtfeld RD, Hashsham SA, Tiedje JM. Diverse and abundant antibiotic resistance genes in Chinese swine farms. Proceedings of the National Academy of Sciences of the United States of America. 110: 3435-40. PMID 23401528 DOI: 10.1073/Pnas.1222743110  0.674
2013 Ahmad F, Hashsham SA. Corrigendum to “Miniaturized nucleic acid amplification systems for rapid and point-of-care diagnostics: A review” [Anal. Chim. Acta 733 (2012) 1–15] Analytica Chimica Acta. 760: 100. DOI: 10.1016/J.Aca.2012.11.040  0.451
2012 Herzog AB, Pandey AK, Reyes-Gastelum D, Gerba CP, Rose JB, Hashsham SA. Evaluation of sample recovery efficiency for bacteriophage P22 on fomites. Applied and Environmental Microbiology. 78: 7915-22. PMID 22941090 DOI: 10.1128/Aem.01370-12  0.764
2012 Ahmad F, Hashsham SA. Miniaturized nucleic acid amplification systems for rapid and point-of-care diagnostics: a review. Analytica Chimica Acta. 733: 1-15. PMID 22704369 DOI: 10.1016/J.Aca.2012.04.031  0.562
2012 Tourlousse DM, Ahmad F, Stedtfeld RD, Seyrig G, Tiedje JM, Hashsham SA. A polymer microfluidic chip for quantitative detection of multiple water- and foodborne pathogens using real-time fluorogenic loop-mediated isothermal amplification. Biomedical Microdevices. 14: 769-78. PMID 22566273 DOI: 10.1007/S10544-012-9658-3  0.79
2012 Baushke SW, Stedtfeld RD, Tourlousse DM, Ahmad F, Wick LM, Gulari E, Tiedje JM, Hashsham SA. Identification of non-specific hybridization using an empirical equation fitted to non-equilibrium dissociation curves. Journal of Microbiological Methods. 90: 29-35. PMID 22537822 DOI: 10.1016/J.Mimet.2012.04.003  0.777
2012 Stedtfeld RD, Tourlousse DM, Seyrig G, Stedtfeld TM, Kronlein M, Price S, Ahmad F, Gulari E, Tiedje JM, Hashsham SA. Gene-Z: a device for point of care genetic testing using a smartphone. Lab On a Chip. 12: 1454-62. PMID 22374412 DOI: 10.1039/C2Lc21226A  0.783
2012 Looft T, Johnson TA, Allen HK, Bayles DO, Alt DP, Stedtfeld RD, Sul WJ, Stedtfeld TM, Chai B, Cole JR, Hashsham SA, Tiedje JM, Stanton TB. In-feed antibiotic effects on the swine intestinal microbiome. Proceedings of the National Academy of Sciences of the United States of America. 109: 1691-6. PMID 22307632 DOI: 10.1073/Pnas.1120238109  0.661
2012 Sinclair RG, Rose JB, Hashsham SA, Gerba CP, Haas CN. Criteria for selection of surrogates used to study the fate and control of pathogens in the environment. Applied and Environmental Microbiology. 78: 1969-77. PMID 22247166 DOI: 10.1128/Aem.06582-11  0.305
2012 Ahmad F, Pandey AK, Herzog AB, Rose JB, Gerba CP, Hashsham SA. Environmental applications and potential health implications of quantum dots Journal of Nanoparticle Research. 14. DOI: 10.1007/S11051-012-1038-7  0.769
2011 Ahmad F, Seyrig G, Tourlousse DM, Stedtfeld RD, Tiedje JM, Hashsham SA. A CCD-based fluorescence imaging system for real-time loop-mediated isothermal amplification-based rapid and sensitive detection of waterborne pathogens on microchips. Biomedical Microdevices. 13: 929-37. PMID 21720851 DOI: 10.1007/S10544-011-9562-2  0.778
2011 Iwai S, Johnson TA, Chai B, Hashsham SA, Tiedje JM. Comparison of the specificities and efficacies of primers for aromatic dioxygenase gene analysis of environmental samples. Applied and Environmental Microbiology. 77: 3551-7. PMID 21498766 DOI: 10.1128/Aem.00331-11  0.41
2011 Seyrig G, Herzog AB, Ahmad F, Srinivasan S, Kronlein MR, Bhaduri P, Hashsham SA. Detection and occurrence of indicator organisms and pathogens Water Environment Research. 83: 900-926. DOI: 10.2175/106143011X13075599869056  0.78
2010 Iwai S, Chai B, Sul WJ, Cole JR, Hashsham SA, Tiedje JM. Gene-targeted-metagenomics reveals extensive diversity of aromatic dioxygenase genes in the environment. The Isme Journal. 4: 279-85. PMID 19776767 DOI: 10.1038/Ismej.2009.104  0.383
2010 Maqbool SB, Ahmad A, Dhawan A, Callister SJ, Tsoi T, Sticklen MB, Hashsham SA. Response of selected genes of burkholderia xenovorans strain lb400 to onion extract using a DNA:RNA hybrid capture detection system* Research Journal of Microbiology. 5: 1100-1113. DOI: 10.3923/Jm.2006.378.391  0.679
2009 Herzog AB, McLennan SD, Pandey AK, Gerba CP, Haas CN, Rose JB, Hashsham SA. Implications of limits of detection of various methods for Bacillus anthracis in computing risks to human health. Applied and Environmental Microbiology. 75: 6331-9. PMID 19648357 DOI: 10.1128/Aem.00288-09  0.785
2009 Callister SJ, Parnell JJ, Pfrender ME, Hashsham SA. Relating perturbation magnitude to temporal gene expression in biological systems. Bmc Research Notes. 2: 43. PMID 19298657 DOI: 10.1186/1756-0500-2-43  0.681
2008 Pozhitkov AE, Rule RA, Stedtfeld RD, Hashsham SA, Noble PA. Concentration dependency of nonequilibrium thermal dissociation curves in complex target samples. Journal of Microbiological Methods. 74: 82-8. PMID 18471911 DOI: 10.1016/J.Mimet.2008.03.010  0.652
2008 Stedtfeld RD, Baushke SW, Tourlousse DM, Miller SM, Stedtfeld TM, Gulari E, Tiedje JM, Hashsham SA. Development and experimental validation of a predictive threshold cycle equation for quantification of virulence and marker genes by high-throughput nanoliter-volume PCR on the OpenArray platform. Applied and Environmental Microbiology. 74: 3831-8. PMID 18424532 DOI: 10.1128/Aem.02743-07  0.787
2008 Zhao X, Musleh R, Maher S, Khire MV, Voice TC, Hashsham SA. Start-up performance of a full-scale bioreactor landfill cell under cold-climate conditions. Waste Management (New York, N.Y.). 28: 2623-34. PMID 18316182 DOI: 10.1016/J.Wasman.2008.01.007  0.742
2008 Miller SM, Tourlousse DM, Stedtfeld RD, Baushke SW, Herzog AB, Wick LM, Rouillard JM, Gulari E, Tiedje JM, Hashsham SA. In situ-synthesized virulence and marker gene biochip for detection of bacterial pathogens in water. Applied and Environmental Microbiology. 74: 2200-9. PMID 18245235 DOI: 10.1128/Aem.01962-07  0.804
2007 Stedtfeld RD, Baushke S, Tourlousse D, Chai B, Cole JR, Hashsham SA. Multiplex approach for screening genetic markers of microbial indicators. Water Environment Research : a Research Publication of the Water Environment Federation. 79: 260-9. PMID 17469657 DOI: 10.2175/106143007X181378  0.785
2007 Tourlousse DM, Stedtfeld RD, Baushke SW, Wick LM, Hashsham SA. Virulence factor activity relationships: challenges and development approaches. Water Environment Research : a Research Publication of the Water Environment Federation. 79: 246-59. PMID 17469656 DOI: 10.2175/106143007X156826  0.777
2007 Pozhitkov AE, Stedtfeld RD, Hashsham SA, Noble PA. Revision of the nonequilibrium thermal dissociation and stringent washing approaches for identification of mixed nucleic acid targets by microarrays. Nucleic Acids Research. 35: e70. PMID 17430966 DOI: 10.1093/Nar/Gkm154  0.664
2007 Stedtfeld RD, Wick LM, Baushke SW, Tourlousse DM, Herzog AB, Xia Y, Rouillard JM, Klappenbach JA, Cole JR, Gulari E, Tiedje JM, Hashsham SA. Influence of dangling ends and surface-proximal tails of targets on probe-target duplex formation in 16S rRNA gene-based diagnostic arrays. Applied and Environmental Microbiology. 73: 380-9. PMID 17114322 DOI: 10.1128/Aem.01785-06  0.778
2007 Hashsham SA, Gulari E, Tiedje JM. Microfluidic systems being adapted for microbial, molecular biological analyses Microbe. 2: 531-536. DOI: 10.1128/Microbe.2.531.1  0.322
2006 Parnell JJ, Park J, Denef V, Tsoi T, Hashsham S, Quensen J, Tiedje JM. Coping with polychlorinated biphenyl (PCB) toxicity: Physiological and genome-wide responses of Burkholderia xenovorans LB400 to PCB-mediated stress. Applied and Environmental Microbiology. 72: 6607-14. PMID 17021212 DOI: 10.1128/Aem.01129-06  0.3
2006 Wick LM, Rouillard JM, Whittam TS, Gulari E, Tiedje JM, Hashsham SA. On-chip non-equilibrium dissociation curves and dissociation rate constants as methods to assess specificity of oligonucleotide probes. Nucleic Acids Research. 34: e26. PMID 16478712 DOI: 10.1093/Nar/Gnj024  0.384
2005 Duran M, Alm EW, Stedtfeld RD, Haznedaroglu BZ, Hashsham SA. Detection and occurrence of indicator organisms and pathogens Water Environment Research. 77: 659-717. DOI: 10.2175/106143005X54335  0.617
2004 Hashsham SA, Wick LM, Rouillard JM, Gulari E, Tiedje JM. Potential of DNA microarrays for developing parallel detection tools (PDTs) for microorganisms relevant to biodefense and related research needs. Biosensors & Bioelectronics. 20: 668-83. PMID 15522582 DOI: 10.1016/J.Bios.2004.06.032  0.427
2004 Denef VJ, Park J, Tsoi TV, Rouillard JM, Zhang H, Wibbenmeyer JA, Verstraete W, Gulari E, Hashsham SA, Tiedje JM. Biphenyl and benzoate metabolism in a genomic context: outlining genome-wide metabolic networks in Burkholderia xenovorans LB400. Applied and Environmental Microbiology. 70: 4961-70. PMID 15294836 DOI: 10.1128/Aem.70.8.4961-4970.2004  0.346
2004 Jenkins T, Scott T, Cole J, Hashsham S, Rose J. Assessment of virulence-factor activity relationships (VFARs) for waterborne diseases Water Science and Technology. 50: 309-314. DOI: 10.2166/Wst.2004.0072  0.367
2003 Denef VJ, Park J, Rodrigues JL, Tsoi TV, Hashsham SA, Tiedje JM. Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities. Environmental Microbiology. 5: 933-43. PMID 14510847 DOI: 10.1046/J.1462-2920.2003.00490.X  0.454
2003 Musarrat J, Hashsham SA. Customized cDNA microarray for expression profiling of environmentally important genes of Pseudomonas stutzeri strain KC. Teratogenesis, Carcinogenesis, and Mutagenesis. 283-94. PMID 12616619 DOI: 10.1002/Tcm.10054  0.403
2003 Callister SJ, Ayala-del-Rio HL, Hashsham SA. Quantification of a single population in a mixed microbial community using a laser integrated microarray scanner Journal of Environmental Engineering and Science. 2: 247-253. DOI: 10.1139/S03-027  0.632
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