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Matthew Shirley - Publications

Affiliations: 
2013 University of Florida, Gainesville, Gainesville, FL, United States 
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10/45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Pérez-Fleitas E, Milián-García Y, Sosa-Rodríguez G, Amato G, Rossi N, Shirley MH, Hanner RH. Environmental DNA-based biomonitoring of Cuban Crocodylus and their accompanying vertebrate fauna from Zapata Swamp, Cuba. Scientific Reports. 13: 20438. PMID 37993480 DOI: 10.1038/s41598-023-47675-8  0.569
2021 Ahizi MN, Kouman CY, Ouattara A, Kouamé NP, Dede A, Fairet E, Shirley MH. Detectability and impact of repetitive surveys on threatened West African crocodylians. Ecology and Evolution. 11: 15062-15076. PMID 34765160 DOI: 10.1002/ece3.8188  0.436
2021 Carr AN, Nestler JH, Vliet KA, Brochu CA, Murray CM, Shirley MH. Use of continuous cranial shape variation in the identification of divergent crocodile species of the genus Mecistops. Journal of Morphology. PMID 33945166 DOI: 10.1002/jmor.21365  0.588
2020 Somaweera R, Nifong J, Rosenblatt A, Brien ML, Combrink X, Elsey RM, Grigg G, Magnusson WE, Mazzotti FJ, Pearcy A, Platt SG, Shirley MH, Tellez M, van der Ploeg J, Webb G, et al. The ecological importance of crocodylians: towards evidence-based justification for their conservation. Biological Reviews of the Cambridge Philosophical Society. PMID 32154985 DOI: 10.1111/Brv.12594  0.469
2018 Shirley MH, Carr AN, Nestler JH, Vliet KA, Brochu CA. Systematic revision of the living African Slender-snouted Crocodiles (Mecistops Gray, 1844). Zootaxa. 4504: 151-193. PMID 30486023 DOI: 10.11646/Zootaxa.4504.2.1  0.532
2017 Shirley MH, Austin JD. Did Late Pleistocene climate change result in parallel genetic structure and demographic bottlenecks in sympatric Central African crocodiles, Mecistops and Osteolaemus? Molecular Ecology. PMID 29024142 DOI: 10.1111/Mec.14378  0.524
2016 Cunningham SW, Shirley MH, Hekkala ER. Fine scale patterns of genetic partitioning in the rediscovered African crocodile, Crocodylus suchus (Saint-Hilaire 1807). Peerj. 4: e1901. PMID 27114867 DOI: 10.7717/Peerj.1901  0.426
2014 Shirley MH, Vliet KA, Carr AN, Austin JD. Rigorous approaches to species delimitation have significant implications for African crocodilian systematics and conservation. Proceedings. Biological Sciences / the Royal Society. 281: 20132483. PMID 24335982 DOI: 10.1098/Rspb.2013.2483  0.549
2011 Merchant M, Juneau K, Gemillion J, Falconi R, Doucet A, Shirley MH. Characterization of serum phospholipase a(2) activity in three diverse species of west african crocodiles. Biochemistry Research International. 2011: 925012. PMID 22110960 DOI: 10.1155/2011/925012  0.361
2011 Hekkala E, Shirley MH, Amato G, Austin JD, Charter S, Thorbjarnarson J, Vliet KA, Houck ML, Desalle R, Blum MJ. An ancient icon reveals new mysteries: mummy DNA resurrects a cryptic species within the Nile crocodile. Molecular Ecology. 20: 4199-215. PMID 21906195 DOI: 10.1111/J.1365-294X.2011.05245.X  0.551
Low-probability matches (unlikely to be authored by this person)
2016 Červená B, Brant SV, Fairet E, Shirley MH, Petrželková KJ, Modrý D. Schistosoma mansoni in Gabon: Emerging or Ignored? The American Journal of Tropical Medicine and Hygiene. 95: 849-851. PMID 27503513 DOI: 10.4269/Ajtmh.16-0446  0.255
2022 Mason B, Petrzelkova KJ, Kreisinger J, Bohm T, Cervena B, Fairet E, Fuh T, Gomez A, Knauf S, Maloueki U, Modry D, Shirley MH, Tagg N, Wangue N, Pafco B. Gastrointestinal symbiont diversity in wild gorilla: a comparison of bacterial and strongylid communities across multiple localities. Molecular Ecology. PMID 35661299 DOI: 10.1111/mec.16558  0.208
2012 Shirley MD, Baugher JD, Stevens EL, Tang Z, Gerry N, Beiswanger CM, Berlin DS, Pevsner J. Chromosomal variation in lymphoblastoid cell lines. Human Mutation. 33: 1075-86. PMID 22374857 DOI: 10.1002/Humu.22062  0.138
2012 Stevens EL, Baugher JD, Shirley MD, Frelin LP, Pevsner J. Unexpected relationships and inbreeding in HapMap phase III populations. Plos One. 7: e49575. PMID 23185369 DOI: 10.1371/Journal.Pone.0049575  0.132
2024 Ledford CK, Shirley MB, Spangehl MJ, Berry DJ, Abdel MP. Do breast cancer patients have increased risk of complications after primary total hip and total knee arthroplasty? The Bone & Joint Journal. 365-371. PMID 38555948 DOI: 10.1302/0301-620X.106B4.BJJ-2023-0968.R1  0.12
2024 Wahlig BD, Shirley MB, Hadley ML, Thapa P, Krych AJ, Stuart MJ, Trousdale RT. Knee Arthroscopy Following Total Knee Arthroplasty is not Associated with an Elevated Risk of Infection. The Journal of Arthroplasty. PMID 38408714 DOI: 10.1016/j.arth.2024.02.057  0.12
2013 Baugher JD, Baugher BD, Shirley MD, Pevsner J. Sensitive and specific detection of mosaic chromosomal abnormalities using the Parent-of-Origin-based Detection (POD) method. Bmc Genomics. 14: 367. PMID 23724825 DOI: 10.1186/1471-2164-14-367  0.118
2020 Rago F, Elliott G, Li A, Sprouffske K, Kerr G, Desplat A, Abramowski D, Chen JT, Farsidjani A, Xiang KX, Bushold G, Feng Y, Shirley MD, Bric A, Vattay A, et al. The discovery of SWI/SNF chromatin remodeling activity as a novel and targetable dependency in uveal melanoma. Molecular Cancer Therapeutics. PMID 32747420 DOI: 10.1158/1535-7163.Mct-19-1013  0.108
2016 Munoz DM, Cassiani PJ, Li L, Billy E, Korn JM, Jones MD, Golji J, Ruddy DA, Yu K, McAllister G, DeWeck A, Abramowski D, Wan J, Shirley MD, Neshat SY, et al. CRISPR screens provide a comprehensive assessment of cancer vulnerabilities but generate false-positive hits for highly amplified genomic regions. Cancer Discovery. PMID 27260157 DOI: 10.1158/2159-8290.Cd-16-0178  0.089
2021 Wilbur RR, Shirley MB, Nauert RF, LaPrade MD, Okoroha KR, Krych AJ, Camp CL. Anterior Shoulder Instability in Throwers and Overhead Athletes: Long-term Outcomes in a Geographic Cohort. The American Journal of Sports Medicine. 3635465211059195. PMID 34786982 DOI: 10.1177/03635465211059195  0.087
2020 Claxton MR, Shirley MB, Bakri K, Rose PS, Moran SL, Houdek MT. Utility of the Free Vascularized Fibula Flap to Reconstruct Oncologic Defects in the Upper Extremity. Anticancer Research. 40: 2751-2755. PMID 32366420 DOI: 10.21873/anticanres.14246  0.084
2021 Claxton MR, Shirley MB, Nauert RF, Morrey ME, Sanchez-Sotelo J, Houdek MT. Humeral amputation following total elbow arthroplasty. International Orthopaedics. PMID 33447873 DOI: 10.1007/s00264-020-04906-1  0.082
2019 Hellem A, Shirley M, Schilaty N, Dahm D. Review of Shoulder Range of Motion in the Throwing Athlete: Distinguishing Normal Adaptations from Pathologic Deficits. Current Reviews in Musculoskeletal Medicine. 12: 346-355. PMID 31264172 DOI: 10.1007/S12178-019-09563-5  0.081
2020 McPherson AL, Shirley MB, Schilaty ND, Larson DR, Hewett TE. Effect of a Concussion on Anterior Cruciate Ligament Injury Risk in a General Population. Sports Medicine (Auckland, N.Z.). PMID 31970718 DOI: 10.1007/S40279-020-01262-3  0.078
2023 Hadley ML, Shirley MB, Pulido L, Lewallen DG. Intussusception Allograft Prosthetic Composites in Total Hip Arthroplasty: A Salvage Operation for Extensive Femoral Bone Loss. The Journal of Arthroplasty. PMID 36940757 DOI: 10.1016/j.arth.2023.03.038  0.073
2013 Shirley MD, Tang H, Gallione CJ, Baugher JD, Frelin LP, Cohen B, North PE, Marchuk DA, Comi AM, Pevsner J. Sturge-Weber syndrome and port-wine stains caused by somatic mutation in GNAQ. The New England Journal of Medicine. 368: 1971-9. PMID 23656586 DOI: 10.1056/Nejmoa1213507  0.07
2020 Claxton MR, Shirley MB, Johnson JD, Perry KI, Rose PS, Houdek MT. Hip Arthroplasty Following Subtotal Sacrectomy for Chordoma. In Vivo (Athens, Greece). 34: 2517-2520. PMID 32871780 DOI: 10.21873/invivo.12068  0.068
2016 Shirley MD, Frelin L, López JS, Jedlicka A, Dziedzic A, Frank-Crawford MA, Silverman W, Hagopian L, Pevsner J. Copy Number Variants Associated with 14 Cases of Self-Injurious Behavior. Plos One. 11: e0149646. PMID 26933844 DOI: 10.1371/Journal.Pone.0149646  0.066
2022 Shirley MB, Stuart MB, Claxton MR, Sousa PL, Perry KI, Couch CG, Andrews KL, Houdek MT. Contemporary Outcomes of Transfemoral Amputation Following Total Knee Arthroplasty. The Journal of Arthroplasty. PMID 35271972 DOI: 10.1016/j.arth.2022.02.114  0.065
2021 Rainer W, Shirley MB, Trousdale RT, Shaughnessy WJ. The Open Triradiate Cartilage: How Young is Too Young for Total Hip Arthroplasty? Journal of Pediatric Orthopedics. PMID 34411043 DOI: 10.1097/BPO.0000000000001940  0.065
2017 Carli AV, Bhimani S, Yang X, Shirley MB, de Mesy Bentley KL, Ross FP, Bostrom MP. Quantification of Peri-Implant Bacterial Load and in Vivo Biofilm Formation in an Innovative, Clinically Representative Mouse Model of Periprosthetic Joint Infection. The Journal of Bone and Joint Surgery. American Volume. 99: e25. PMID 28291188 DOI: 10.2106/JBJS.16.00815  0.063
2013 Shirley MD. Concerns regarding "Whole exome sequencing reveals minimal differences between cell line and whole blood derived DNA". Genomics. 102: 430. PMID 23916999 DOI: 10.1016/J.Ygeno.2013.07.013  0.063
2018 Leung GP, Feng T, Sigoillot FD, Geyer FC, Shirley MD, Ruddy DA, Rakiec D, Freeman AK, Engelman JA, Jaskelioff M, Stuart DD. Hyperactivation of MAPK Signaling is Deleterious to RAS/RAF Mutant Melanoma. Molecular Cancer Research : McR. PMID 30201825 DOI: 10.1158/1541-7786.Mcr-18-0327  0.06
2021 Pinter ZW, Mikula A, Shirley M, Xiong A, Wagner S, Elder BD, Freedman BA, Nassr A, Bydon M, Currier B, Kaye ID, Kepler C, Sebastian AS. Allograft Subsidence Decreases Postoperative Segmental Lordosis With Minimal Effect on Global Alignment Following ACDF. Global Spine Journal. 2192568220988270. PMID 33472412 DOI: 10.1177/2192568220988270  0.06
2022 Pinter ZW, Mikula A, Shirley M, Xiong A, Michalopoulos G, Ghaith AK, Wagner S, Elder BD, Freedman BA, Nassr A, Bydon M, Currier B, Kaye ID, Kepler C, Sebastian AS. Risk Factors for Allograft Subsidence following ACDF. World Neurosurgery. PMID 36574570 DOI: 10.1016/j.wneu.2022.11.109  0.059
2019 Hernandez CJ, Yang X, Ji G, Niu Y, Sethuraman AS, Koressel J, Shirley M, Fields MW, Chyou S, Li TM, Luna M, Callahan RL, Ross FP, Lu TT, Brito IL, et al. Disruption of the Gut Microbiome Increases the Risk of Periprosthetic Joint Infection in Mice. Clinical Orthopaedics and Related Research. PMID 31283731 DOI: 10.1097/CORR.0000000000000851  0.058
2019 Ku T, Lopresti N, Shirley M, Mori M, Marchant J, Heng X, Botta M, Summers MF, Seley-Radtke KL. Synthesis of distal and proximal fleximer base analogues and evaluation in the nucleocapsid protein of HIV-1. Bioorganic & Medicinal Chemistry. PMID 31126822 DOI: 10.1016/J.Bmc.2019.05.019  0.057
2013 Newman RH, Hu J, Rho HS, Xie Z, Woodard C, Neiswinger J, Cooper C, Shirley M, Clark HM, Hu S, Hwang W, Jeong JS, Wu G, Lin J, Gao X, et al. Construction of human activity-based phosphorylation networks. Molecular Systems Biology. 9: 655. PMID 23549483 DOI: 10.1038/Msb.2013.12  0.057
2021 Gausden EB, Shirley MB, Abdel MP, Sierra RJ. Increased risk of periprosthetic joint infection after acute, traumatic wound dehiscence following primary total knee arthroplasty. The Bone & Joint Journal. 191-195. PMID 34053286 DOI: 10.1302/0301-620X.103B6.BJJ-2020-2425.R1  0.048
2021 Crowe MS, Zavorotinskaya T, Voliva CF, Shirley MD, Wang Y, Ruddy DA, Rakiec DP, Engelman JA, Stuart DD, Freeman AK. RAF-mutant melanomas differentially depend on ERK2 over ERK1 to support aberrant MAPK pathway activation and cell proliferation. Molecular Cancer Research : McR. PMID 33707308 DOI: 10.1158/1541-7786.MCR-20-1022  0.047
2019 Hao HX, Wang H, Liu C, Kovats S, Velazquez R, Lu H, Pant B, Shirley M, Meyer MJ, Pu M, Lim J, Fleming M, Alexander L, Farsidjani A, LaMarche MJ, et al. Tumor intrinsic efficacy by SHP2 and RTK inhibitors in KRAS mutant cancers. Molecular Cancer Therapeutics. PMID 31439712 DOI: 10.1158/1535-7163.Mct-19-0170  0.042
2024 Elbatsh AMO, Amin-Mansour A, Haberkorn A, Textor C, Ebel N, Renard E, Koch LM, Groenveld FC, Piquet M, Naumann U, Ruddy DA, Romanet V, Martínez Gómez JM, Shirley MD, Wipfli P, et al. INPP5A phosphatase is a synthetic lethal target in GNAQ and GNA11-mutant melanomas. Nature Cancer. PMID 38233483 DOI: 10.1038/s43018-023-00710-z  0.038
2020 Shirley M, Wanderman N, Keaveny T, Anderson P, Freedman BA. Opportunistic Computed Tomography and Spine Surgery: A Narrative Review. Global Spine Journal. 10: 919-928. PMID 32905730 DOI: 10.1177/2192568219889362  0.025
2021 Wang HQ, Mulford IJ, Sharp F, Liang J, Kurtulus S, Trabucco G, Quinn DS, Longmire TA, Patel N, Patil R, Shirley MD, Chen Y, Wang H, Ruddy DA, Fabre C, et al. Inhibition of MDM2 promotes anti-tumor responses in p53 wild-type cancer cells through their interaction with the immune and stromal microenvironment. Cancer Research. PMID 33504557 DOI: 10.1158/0008-5472.CAN-20-0189  0.024
2017 Carlson D, David LK, Gallagher NM, Vu MT, Shirley M, Hultman R, Wang J, Burrus C, McClung CA, Kumar S, Carin L, Mague SD, Dzirasa K. Dynamically Timed Stimulation of Corticolimbic Circuitry Activates a Stress-Compensatory Pathway. Biological Psychiatry. PMID 28728677 DOI: 10.1016/J.Biopsych.2017.06.008  0.014
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