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Zefu Lu - Publications

Affiliations: 
2015-2019 Chinese Academy of Agricultural Sciences, PR China 
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27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Xin H, Liu X, Chai S, Yang X, Li H, Wang B, Xu Y, Lin S, Zhong X, Liu B, Lu Z, Zhang Z. Identification and functional characterization of conserved cis-regulatory elements responsible for early fruit development in cucurbit crops. The Plant Cell. PMID 38421027 DOI: 10.1093/plcell/koae064  0.496
2024 Harkess A, Bewick AJ, Lu Z, Fourounjian P, Michael TP, Schmitz RJ, Meyers BC. Unusual predominance of maintenance DNA methylation in Spirodela polyrhiza. G3 (Bethesda, Md.). PMID 38190722 DOI: 10.1093/g3journal/jkae004  0.771
2023 Jia J, Zhao G, Li D, Wang K, Kong C, Deng P, Yan X, Zhang X, Lu Z, Xu S, Jiao Y, Chong K, Liu X, Cui D, Li G, et al. Genome resources for the elite bread wheat cultivar Aikang 58 and mining of elite homeologous haplotypes for accelerating wheat improvement. Molecular Plant. PMID 37897037 DOI: 10.1016/j.molp.2023.10.015  0.35
2023 Li X, Li J, Wei S, Gao Y, Pei H, Geng R, Lu Z, Wang P, Zhou W. Maize GOLDEN2-LIKE proteins enhance drought tolerance in rice by promoting stomatal closure. Plant Physiology. PMID 37850886 DOI: 10.1093/plphys/kiad561  0.303
2023 Yang Y, Cui L, Lu Z, Li G, Yang Z, Zhao G, Kong C, Li D, Chen Y, Xie Z, Chen Z, Zhang L, Xia C, Liu X, Jia J, et al. Genome sequencing of Sitopsis species provides insights into their contribution to the B subgenome of bread wheat. Plant Communications. 100567. PMID 36855304 DOI: 10.1016/j.xplc.2023.100567  0.418
2023 Zhao J, Xie Y, Kong C, Lu Z, Jia H, Ma Z, Zhang Y, Cui D, Ru Z, Wang Y, Appels R, Jia J, Zhang X. Centromere repositioning and shifts in wheat evolution. Plant Communications. 100556. PMID 36739481 DOI: 10.1016/j.xplc.2023.100556  0.347
2022 Pei H, Teng W, Gao L, Gao H, Ren X, Liu Y, Jia J, Tong Y, Wang Y, Lu Z. Low-affinity SPL binding sites contribute to subgenome expression divergence in allohexaploid wheat. Science China. Life Sciences. PMID 36417050 DOI: 10.1007/s11427-022-2202-3  0.348
2022 Xiao J, Liu B, Yao Y, Guo Z, Jia H, Kong L, Zhang A, Ma W, Ni Z, Xu S, Lu F, Jiao Y, Yang W, Lin X, Sun S, ... Lu Z, et al. Wheat genomic study for genetic improvement of traits in China. Science China. Life Sciences. PMID 36018491 DOI: 10.1007/s11427-022-2178-7  0.323
2022 Gong J, Tang Y, Liu Y, Sun R, Li Y, Ma J, Zhang S, Zhang F, Chen Z, Liao X, Sun H, Lu Z, Zhao C, Gao S. The Central Circadian Clock Protein TaCCA1 Regulates Seedling Growth and Spike Development in Wheat ( L.). Frontiers in Plant Science. 13: 946213. PMID 35923880 DOI: 10.3389/fpls.2022.946213  0.459
2022 Wei S, Li X, Lu Z, Zhang H, Ye X, Zhou Y, Li J, Yan Y, Pei H, Duan F, Wang D, Chen S, Wang P, Zhang C, Shang L, et al. A transcriptional regulator that boosts grain yields and shortens the growth duration of rice. Science (New York, N.Y.). 377: eabi8455. PMID 35862527 DOI: 10.1126/science.abi8455  0.307
2021 Ferraro AR, Ameri AJ, Lu Z, Kamei M, Schmitz RJ, Lewis ZA. Chromatin accessibility profiling in Neurospora crassa reveals molecular features associated with accessible and inaccessible chromatin. Bmc Genomics. 22: 459. PMID 34147068 DOI: 10.1186/s12864-021-07774-0  0.6
2021 Tian H, Li Y, Wang C, Xu X, Zhang Y, Zeb Q, Zicola J, Fu Y, Turck F, Li L, Lu Z, Liu L. Photoperiod-responsive changes in chromatin accessibility in phloem companion and epidermis cells of Arabidopsis leaves. The Plant Cell. 33: 475-491. PMID 33955490 DOI: 10.1093/plcell/koaa043  0.401
2021 Noshay JM, Marand AP, Anderson SN, Zhou P, Mejia Guerra MK, Lu Z, O'Connor CH, Crisp PA, Hirsch CN, Schmitz RJ, Springer NM. Assessing the regulatory potential of transposable elements using chromatin accessibility profiles of maize transposons. Genetics. 217: 1-13. PMID 33683350 DOI: 10.1093/genetics/iyaa003  0.783
2021 Yocca AE, Lu Z, Schmitz RJ, Freeling M, Edger PP. Evolution of conserved noncoding sequences in Arabidopsis thaliana. Molecular Biology and Evolution. PMID 33565589 DOI: 10.1093/molbev/msab042  0.65
2020 Xu X, Crow M, Rice BR, Li F, Harris B, Liu L, Demesa-Arevalo E, Lu Z, Wang L, Fox N, Wang X, Drenkow J, Luo A, Char SN, Yang B, et al. Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery. Developmental Cell. PMID 33400914 DOI: 10.1016/j.devcel.2020.12.015  0.587
2020 Wang T, Kwon SH, Peng X, Urdy S, Lu Z, Schmitz RJ, Dalton S, Mostov KE, Zhao S. A Qualitative Change in the Transcriptome Occurs after the First Cell Cycle and Coincides with Lumen Establishment during MDCKII Cystogenesis. Iscience. 23: 101629. PMID 33089114 DOI: 10.1016/j.isci.2020.101629  0.471
2020 Crisp PA, Marand AP, Noshay JM, Zhou P, Lu Z, Schmitz RJ, Springer NM. Stable unmethylated DNA demarcates expressed genes and their cis-regulatory space in plant genomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 32879011 DOI: 10.1073/Pnas.2010250117  0.792
2020 Grover CE, Pan M, Yuan D, Arick MA, Hu G, Brase L, Stelly DM, Lu Z, Schmitz RJ, Peterson DG, Wendel JF, Udall JA. The Genome as a Resource for Cotton Breeding and Evolution. G3 (Bethesda, Md.). PMID 32122962 DOI: 10.1534/G3.120.401050  0.581
2020 Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, et al. Author Correction: Widespread long-range cis-regulatory elements in the maize genome. Nature Plants. PMID 32029893 DOI: 10.1038/S41477-020-0600-Z  0.733
2019 Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, et al. Widespread long-range cis-regulatory elements in the maize genome. Nature Plants. PMID 31740773 DOI: 10.1038/S41477-019-0547-0  0.774
2019 Lu Z, Marand AP, Ricci WA, Ethridge CL, Zhang X, Schmitz RJ. The prevalence, evolution and chromatin signatures of plant regulatory elements. Nature Plants. PMID 31740772 DOI: 10.1038/S41477-019-0548-Z  0.777
2019 Noshay JM, Anderson SN, Zhou P, Ji L, Ricci W, Lu Z, Stitzer MC, Crisp PA, Hirsch CN, Zhang X, Schmitz RJ, Springer NM. Monitoring the interplay between transposable element families and DNA methylation in maize. Plos Genetics. 15: e1008291. PMID 31498837 DOI: 10.1371/Journal.Pgen.1008291  0.642
2018 Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nature Communications. 9: 4526. PMID 30375394 DOI: 10.1038/S41467-018-06977-6  0.605
2018 Lu Z, Ricci WA, Schmitz RJ, Zhang X. Identification of cis-regulatory elements by chromatin structure. Current Opinion in Plant Biology. 42: 90-94. PMID 29704803 DOI: 10.1016/J.Pbi.2018.04.004  0.683
2016 Lu Z, Hofmeister BT, Vollmers C, DuBois RM, Schmitz RJ. Combining ATAC-seq with nuclei sorting for discovery of cis-regulatory regions in plant genomes. Nucleic Acids Research. PMID 27903897 DOI: 10.1093/Nar/Gkw1179  0.711
2016 Bewick AJ, Ji L, Niederhuth CE, Willing EM, Hofmeister BT, Shi X, Wang L, Lu Z, Rohr NA, Hartwig B, Kiefer C, Deal RB, Schmutz J, Grimwood J, Stroud H, et al. On the origin and evolutionary consequences of gene body DNA methylation. Proceedings of the National Academy of Sciences of the United States of America. 113: 9111-6. PMID 27457936 DOI: 10.1073/Pnas.1604666113  0.72
2013 Lu Z, Yu H, Xiong G, Wang J, Jiao Y, Liu G, Jing Y, Meng X, Hu X, Qian Q, Fu X, Wang Y, Li J. Genome-wide binding analysis of the transcription activator ideal plant architecture1 reveals a complex network regulating rice plant architecture. The Plant Cell. 25: 3743-59. PMID 24170127 DOI: 10.1105/tpc.113.113639  0.413
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